Moc04g27290 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g27290
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Locationchr4: 20106711 .. 20110163 (+)
RNA-Seq ExpressionMoc04g27290
SyntenyMoc04g27290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAGCAACATAAACCCCCGGCACCAATTGGGGGCAAGAGCGACCATGATGATAGAAACTCTGAGCCGACAAGTCTCGACAAAGGCAAACCGGCAGATCAGCCAGAGTCCTCGGAGAAGCGACATAACCAAAAAGAGAAGGGATTCGACCTCGAAGAACTACTGGATCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAGTTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCAACCCAGTGGACCATCTAGATGCTTATCGGGAATGGATGGATATCTACGGAGTGTCGAAATTGGTCAGGTGCCGGGTATTCTCGACTACTTTAAACGGGTCGGCCAGAATATGGTTTCGACAATTAAAACGAGGGTCAATCTCGAGTTTCAAGAGCTTGGCCAGAGCATTCGTGACCCAGTTTGTAGGGGGACAGTGTCAGTCGACCTGTGGCTTATCTTTTAACTATTAAACAGAGACGGCAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTCATGTCCGGCGTCAGGGATGAGCATTTATCATTTTCGTTCAGAAAGAAAACACCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCGCTGGTCAGTTCTTTTACTCAAAAAGGGAGCCAGACGGAAAGCGAACCGACCAAAAGAGGGAGAGATTAAAGGAGAACAACGAGTGTCGCGGGAATGCTACCATACCTCAATGAAGGGCAACGACAGGACTTCTACTAAGGGGGGCTGTTGACCTTTCCTTTCTTCCTTCAAATGTGGTTGTTTTTGTTTCTCTACTTTTAACAAGATTTTTAATTATTATTTCTTTTATTCAATAAAGTGTCCACTTGTTTGGTTCTCTGTCAATTATATCTCTTAAATCCAAAACGAGATACCGACGACTTTGATAAAACACTTTGCCTCGTCTACAAGCGTACTCTCAAAAGATATCAACAATACACTTGAGAGTAGGGGCAATAGGTACCGACCACGGCTCCGACCACGGCTACTCAACGACGTAAGCTTGGTAAATCCAACTCTACACGGCGACGGTAAAACCAGCTATAGTCGAGCAGACCGAGCAGGGCTCGGGACCGACCACTGCTCGGGTCCGACCACTGTTCGGCGTCGACCAAGTGCGAACGGACACAAATCTACATTAATCGGCGGTTTTATGAGATAGCCTATTTTGGTCAATAGGTCTTATTTTCGACTGAGCACGGCTCGGGTCCGACCACCACTCGACGTCAATCACGTGCGACGAGGCATGAATCTACTTTAATCGACACGTTTGGAAAGAACAATTAAACAATCTCAACACGGCCAAACCAGAAGCGGGTCGATTGACCTAGCACGGTTAAAACATGAGATGGAGTAAAAGACCAAAAACAACAGTGGGTGTAAAACCGTTGGCTATGACCAACGAGTTAAAAACTAACGTCGGGCCTGAATAAAGCGACAGACCTCTCGGGAAAGGCAAGGCCAAGCCCTGGTTATCGACTTAATCCGACCACCCTTGATAGGGGAGAACTAGTGACGGGCCTGAATAAAGCGACAGACCTCTCGGGAGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATTCGACCAACCTTGACAGGGGAGAACCGGCTGAGGAGGTAGAATATGTCCCTCTAACAGCCGAAGAACGACGGGTCAATATCGGAACCAAGTTGGGGAATGAGGAAAGAGAAAGCCTTATAAACTTCCTCAGAAGCAACGCCGATGAGTTTGCATGGTCACCGGAGGACATGCCGGGAATCGATCGAGAAGTTATGGTACATCGACTCAACGTCGACGAGAGCTGTAAGCCAGTGAAACAGAAGCGTCGCTCGTTCAACCAAGAAAGGAACGAGATTGTAGCTGAAGAGGTGAATGAGCTACTGAAAACAGGCTTCATTCGGGAAGTACATTATCCCCAGTGGATATCCAACGTAGTGCTGGTAAAGAAGCCAAACGGCAAATGGAGAATGTGCATCGACTTCACGGACCTAAATAAGGCTTGTCCAAAGGATTCTTTTCCTTTGCCTCGAATAGATCAACTGGTTGATGCCACTGCGGGACATGATAGATTGAGTTTCATGGATGCCTACTCTGGATATAATCAAATCAAGATGCATGTACCGGATCAGGAGAAAACCTCTTTTGTCACGAGTTGAGGCTTGTATTGCTACACCGTGATGCCGTTAGGATTGAAGAATGCAGGTGCAACCTACCAACGAATGGTGAATCGGGTGTTTGCAGCCTTAATCGGCAAAAAATATGAATATCTACATATCTACGACCAATCAAGAAACTCAAAATTGGGACGGACCTAGAAGCGGGCCGATAAGCTAAAAGCCAATCAGTGAAACTCGGAAAAAGAATCTCGAGGTGCTGAAAAAGGCATGCGTACAGGCTCAGCAAGGTTAAAACAGAAAACAGGCAAGCCTAACCGATCAACGAAACCCACGGGTAGAAAATCATATGGCAAAAGCCAAAATAGGTTAAAAACCCGAGGGTGTTGATTTAACTTGGGGTAAAAAACCGGCAGAAGCCAAATATGTTAGAAACCTAAAGGTGTCGACTAAACTCAGGGTATAAAAGCCATTGGCAAAAGCCAAGTGGGTTAGAAACCCGAGAGTAAACCCTGAGGTACAAAACATGGGCAAAAGCCAAATAGGTTAGAAACCCAAAGGTATCGACATTAGTTCTGTTAAAGTTAGATCCCAAGGCCAAAAGTAAATGGTTTAAACTCAGATGAGAATAAAACCAGGCTCAGGAGACTTGATTATGGTCAACGAAAATTGGAAAAAACTTCCAATTCATGAATAGTATCGACAAGTTCAAGGCCCAAAACCAGTGGCAGGAACCAAGCACTAAAATCCAGAATTAGATCAAAAGCTTTTGGTAGAAGCCCTGTGCGTTAGCAACCTTCTCATTTTTAGCCATTGATATACAACGGTCTTGTGATAACGACAAGCGACAAGTACTCTCAAAACAAAGATCTTTACACAATTATTCGTCTTCTGTTTTGAGAGTGGGGGCCATTGTTATGGAGAACAAAAACGACCCGAAAAGGGACAAGGAGTTAAAGTCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTAACGGGCCGGCCCAAAGAACGACCTAATGCTGGGACAAAGAACGAGGAAAGCGACTGGCGGAGAACTAACCTGGCCGAGAGGGCTCGGTCCCGACCTGGGGCTCGGTCCCGACCCGGGCCTCGGTCCAGACCCGGGGCTCGGCCCACGGTCCAGCCAACGATCCCCCATCTTCGATCGACGATTCCGCCCAGGCCCTACAATGGTGAATTAGGGTTAGCTATGGAAAGTTCTGGAACAACTACACGCTATAAGTAG

mRNA sequence

ATGAAAAAGCAACATAAACCCCCGGCACCAATTGGGGGCAAGAGCGACCATGATGATAGAAACTCTGAGCCGACAAGTCTCGACAAAGGCAAACCGGCAGATCAGCCAGAGTCCTCGGAGAAGCGACATAACCAAAAAGAGAAGGGATTCGACCTCGAAGAACTACTGGATCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAGTTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCAACCCAGTGGACCATCTAGATGCTTATCGGGAATGGATGGATATCTACGGAGTGTCGAAATTGGTCAGGTGCCGGACGGCAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTCATGTCCGGCGTCAGGGATGAGCATTTATCATTTTCGTTCAGAAAGAAAACACCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCGCTGCCATTGATATACAACGGTCTTGTGATAACGACAAGCGACAAGTACTCTCAAAACAAAGATCTTTACACAATTATTCGTCTTCTGTTTTGAGAGTGGGGGCCATTGTTATGGAGAACAAAAACGACCCGAAAAGGGACAAGGAGTTAAAGTCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTAACGGGCCGGCCCAAAGAACGACCTAATGCTGGGACAAAGAACGAGGAAAGCGACTGGCGGAGAACTAACCTGGCCGAGAGGGCTCGGTCCCGACCTGGGGCTCGGTCCCGACCCGGGCCTCGGTCCAGACCCGGGGCTCGGCCCACGGTCCAGCCAACGATCCCCCATCTTCGATCGACGATTCCGCCCAGGCCCTACAATGGTGAATTAGGGTTAGCTATGGAAAGTTCTGGAACAACTACACGCTATAAGTAG

Coding sequence (CDS)

ATGAAAAAGCAACATAAACCCCCGGCACCAATTGGGGGCAAGAGCGACCATGATGATAGAAACTCTGAGCCGACAAGTCTCGACAAAGGCAAACCGGCAGATCAGCCAGAGTCCTCGGAGAAGCGACATAACCAAAAAGAGAAGGGATTCGACCTCGAAGAACTACTGGATCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAGTTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCAACCCAGTGGACCATCTAGATGCTTATCGGGAATGGATGGATATCTACGGAGTGTCGAAATTGGTCAGGTGCCGGACGGCAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTCATGTCCGGCGTCAGGGATGAGCATTTATCATTTTCGTTCAGAAAGAAAACACCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCGCTGCCATTGATATACAACGGTCTTGTGATAACGACAAGCGACAAGTACTCTCAAAACAAAGATCTTTACACAATTATTCGTCTTCTGTTTTGAGAGTGGGGGCCATTGTTATGGAGAACAAAAACGACCCGAAAAGGGACAAGGAGTTAAAGTCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTAACGGGCCGGCCCAAAGAACGACCTAATGCTGGGACAAAGAACGAGGAAAGCGACTGGCGGAGAACTAACCTGGCCGAGAGGGCTCGGTCCCGACCTGGGGCTCGGTCCCGACCCGGGCCTCGGTCCAGACCCGGGGCTCGGCCCACGGTCCAGCCAACGATCCCCCATCTTCGATCGACGATTCCGCCCAGGCCCTACAATGGTGAATTAGGGTTAGCTATGGAAAGTTCTGGAACAACTACACGCTATAAGTAG

Protein sequence

MKKQHKPPAPIGGKSDHDDRNSEPTSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRCRTAESLHDYVARFNEEKLQVEGLMSGVRDEHLSFSFRKKTPSTFSEALSRAQRYMSAAIDIQRSCDNDKRQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRPKERPNAGTKNEESDWRRTNLAERARSRPGARSRPGPRSRPGARPTVQPTIPHLRSTIPPRPYNGELGLAMESSGTTTRYK
Homology
[Close]
BLAST of Moc04g27290 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-69
Identity = 153/232 (65.95%), Postives = 159/232 (68.53%), Query Frame = 0 

Query: 2   KKQHKPPAPIGGKSDHDDRNSEPTSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADS 61
           KKQHK PAP GGKSDHDDRNSEP SLDKGKPAD+PESSEKRH+ KEKGFDLEELLDQADS
Sbjct: 119 KKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGFDLEELLDQADS 178

Query: 62  PFTEEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRC--------- 121
           PFTEEIMREKVPPKFKLPTVKQFD TT+PVDHLDAYREWMDIYGVS+ VRC         
Sbjct: 179 PFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNG 238

Query: 122 ----------------------------------------------RTAESLHDYVARFN 170
                                                         RT ESL DYVARFN
Sbjct: 239 SARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFN 298

[Close]
BLAST of Moc04g27290 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 265.0 bits (676), Expect = 8.3e-67
Identity = 148/234 (63.25%), Postives = 157/234 (67.09%), Query Frame = 0 

Query: 1   MKKQHKPPAPIGGKSDHDDRNSEPTSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQAD 60
           +KKQHK  AP G K+DHD+RNSEP SL+KGKP D+PESSEKRHNQKEKGFDLEELL QAD
Sbjct: 23  IKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKGFDLEELLGQAD 82

Query: 61  SPFTEEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRC-------- 120
           SPFTEEIMREKVPPKFKLPTVK FDG T PVDHLDAYREWMDIYGVS  +RC        
Sbjct: 83  SPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLN 142

Query: 121 -----------------------------------------------RTAESLHDYVARF 171
                                                          RTAESLHDYVARF
Sbjct: 143 GSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARF 202

[Close]
BLAST of Moc04g27290 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-44
Identity = 116/198 (58.59%), Postives = 127/198 (64.14%), Query Frame = 0 

Query: 3   KQHKPPAPIGGKSDHDDRNSEPTSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADSP 62
           +QHK PAP GGKSDH+DR+SEP SLDKGKPAD+PESSEKRHNQK+KGFDLEELLDQADSP
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSP 100

Query: 63  FTEEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRCRTAESLHDYV 122
           FTEEIMREK                                         RT ESLHDYV
Sbjct: 101 FTEEIMREK-----------------------------------------RTTESLHDYV 160

Query: 123 ARFNEEKLQVEGL---------MSGVRDEHLSFSFRKKTPSTFSEALSRAQRYMSAA-ID 182
            RFN+EKLQVEGL         + GVRDEHLSFSF K+TPSTFSEALSRAQRYMSA    
Sbjct: 161 TRFNKEKLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQRYMSAGEFF 197

Query: 183 IQRSCDNDKRQVLSKQRS 191
             +   N KR    ++RS
Sbjct: 221 YSKRESNGKRTDQKRERS 197

[Close]
BLAST of Moc04g27290 vs. NCBI nr
Match: XP_022156048.1 (uncharacterized protein LOC111023016 [Momordica charantia])

HSP 1 Score: 163.3 bits (412), Expect = 3.4e-36
Identity = 85/93 (91.40%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 182 RQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRPKERPN 241
           RQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRPKERPN
Sbjct: 273 RQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRPKERPN 332

Query: 242 AGTKNEESDWRRTNLAERARSRPGARSRPGPRS 275
           AG KNEESDWRRTN AERARSRP    RP  RS
Sbjct: 333 AGAKNEESDWRRTNRAERARSRPMLGPRPSQRS 365

[Close]
BLAST of Moc04g27290 vs. NCBI nr
Match: XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-34
Identity = 91/169 (53.85%), Postives = 97/169 (57.40%), Query Frame = 0 

Query: 65  EEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRC------------ 124
           EEIM+ KVPPKFKLPTVKQFDGT + VDHLDAYREWMDIYGVS+ V+C            
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 125 -------------------------------------------RTAESLHDYVARFNEEK 170
                                                      R  ESLHDYVARFNEEK
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

[Close]
BLAST of Moc04g27290 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 8.6e-70
Identity = 153/232 (65.95%), Postives = 159/232 (68.53%), Query Frame = 0 

Query: 2   KKQHKPPAPIGGKSDHDDRNSEPTSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADS 61
           KKQHK PAP GGKSDHDDRNSEP SLDKGKPAD+PESSEKRH+ KEKGFDLEELLDQADS
Sbjct: 119 KKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGFDLEELLDQADS 178

Query: 62  PFTEEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRC--------- 121
           PFTEEIMREKVPPKFKLPTVKQFD TT+PVDHLDAYREWMDIYGVS+ VRC         
Sbjct: 179 PFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNG 238

Query: 122 ----------------------------------------------RTAESLHDYVARFN 170
                                                         RT ESL DYVARFN
Sbjct: 239 SARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFN 298

[Close]
BLAST of Moc04g27290 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67
Identity = 148/234 (63.25%), Postives = 157/234 (67.09%), Query Frame = 0 

Query: 1   MKKQHKPPAPIGGKSDHDDRNSEPTSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQAD 60
           +KKQHK  AP G K+DHD+RNSEP SL+KGKP D+PESSEKRHNQKEKGFDLEELL QAD
Sbjct: 23  IKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKGFDLEELLGQAD 82

Query: 61  SPFTEEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRC-------- 120
           SPFTEEIMREKVPPKFKLPTVK FDG T PVDHLDAYREWMDIYGVS  +RC        
Sbjct: 83  SPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLN 142

Query: 121 -----------------------------------------------RTAESLHDYVARF 171
                                                          RTAESLHDYVARF
Sbjct: 143 GSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARF 202

[Close]
BLAST of Moc04g27290 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 9.6e-45
Identity = 116/198 (58.59%), Postives = 127/198 (64.14%), Query Frame = 0 

Query: 3   KQHKPPAPIGGKSDHDDRNSEPTSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADSP 62
           +QHK PAP GGKSDH+DR+SEP SLDKGKPAD+PESSEKRHNQK+KGFDLEELLDQADSP
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSP 100

Query: 63  FTEEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRCRTAESLHDYV 122
           FTEEIMREK                                         RT ESLHDYV
Sbjct: 101 FTEEIMREK-----------------------------------------RTTESLHDYV 160

Query: 123 ARFNEEKLQVEGL---------MSGVRDEHLSFSFRKKTPSTFSEALSRAQRYMSAA-ID 182
            RFN+EKLQVEGL         + GVRDEHLSFSF K+TPSTFSEALSRAQRYMSA    
Sbjct: 161 TRFNKEKLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQRYMSAGEFF 197

Query: 183 IQRSCDNDKRQVLSKQRS 191
             +   N KR    ++RS
Sbjct: 221 YSKRESNGKRTDQKRERS 197

[Close]
BLAST of Moc04g27290 vs. ExPASy TrEMBL
Match: A0A6J1DPJ5 (uncharacterized protein LOC111023016 OS=Momordica charantia OX=3673 GN=LOC111023016 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-36
Identity = 85/93 (91.40%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 182 RQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRPKERPN 241
           RQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRPKERPN
Sbjct: 273 RQVLSKQRSLHNYSSSVLRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGRPKERPN 332

Query: 242 AGTKNEESDWRRTNLAERARSRPGARSRPGPRS 275
           AG KNEESDWRRTN AERARSRP    RP  RS
Sbjct: 333 AGAKNEESDWRRTNRAERARSRPMLGPRPSQRS 365

[Close]
BLAST of Moc04g27290 vs. ExPASy TrEMBL
Match: A0A6J1D7D2 (uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018307 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-34
Identity = 91/169 (53.85%), Postives = 97/169 (57.40%), Query Frame = 0 

Query: 65  EEIMREKVPPKFKLPTVKQFDGTTNPVDHLDAYREWMDIYGVSKLVRC------------ 124
           EEIM+ KVPPKFKLPTVKQFDGT + VDHLDAYREWMDIYGVS+ V+C            
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 125 -------------------------------------------RTAESLHDYVARFNEEK 170
                                                      R  ESLHDYVARFNEEK
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

The following BLAST results are available for this feature:
BLAST of Moc04g27290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158830.11.8e-6965.95uncharacterized protein LOC111025293 [Momordica charantia][more]
XP_022159109.18.3e-6763.25uncharacterized protein LOC111025548 [Momordica charantia][more]
XP_022142767.12.0e-4458.59uncharacterized protein LOC111012805 [Momordica charantia][more]
XP_022156048.13.4e-3691.40uncharacterized protein LOC111023016 [Momordica charantia][more]
XP_022150035.13.2e-3453.85uncharacterized protein LOC111018307 [Momordica charantia][more]
BLAST of Moc04g27290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc04g27290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DWY08.6e-7065.95uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1E1E74.0e-6763.25uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1CNT29.6e-4558.59uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1DPJ51.6e-3691.40uncharacterized protein LOC111023016 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1D7D21.5e-3453.85uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
BLAST of Moc04g27290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g27290.1Moc04g27290.1mRNA