Moc04g26680 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g26680
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	zinc finger protein GIS3-like
Location	chr4: 19590161 .. 19590823 (-)
RNA-Seq Expression	Moc04g26680
Synteny	Moc04g26680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCCTGGATCATTACCAAGCCAAGCAAACCCGCTTAAAGCTCTTTGGCTTCCACGTCCATGAATTGATGGAAGATGATGACAATTCCTCCGCCGCCACTGCCAGATCAACCCCATCTCCCTCCTCCGACTCCGGCGGAGGCGGTGGTGGCGGCGGCGACCGCAAATACGAGTGCCAGTACTGCTACAGAGAGTTCGCCAACTCCCAGGCCCTGGGCGGCCACCAAAATGCCCACAAGAAAGAGCGGCAGCAGCTCAAACGCGCCCAATTGCAAGCCTCCCGAAACGCCGCCGTTTTCAGAAACCCCATCGTCTCCGCCTTCGTCCCCCCGCCCCACCTCCTCTCCGCCGCCGCCACCGCCCAGGCCCATCTCGTCGTCCCCTCCTCCGCCACGTCACCCTCCTGGGTCTACATGCCCCGGGCCCCACCCCAGTTCCAGGTCTCCCACGGCTGCCTCTTCAACAACAACCCCTCCGCCGCCACTCCGCCCTACGCCGCCGCCCCTCCGCCGCCGTTGCCATTCACGATGCGCTCCCACGACGCCCCTTCGCTGAGCCGGTTCTCCAGGGTCGAAGGCGGAACCGGGTTCGAGGATGGACCGGGGTTGGATTTACATCTGGGCCTCGCGCCGGCCGCCCCATCAAGGCCGGAGGGTTAA

mRNA sequence

ATGGCTGCCCTGGATCATTACCAAGCCAAGCAAACCCGCTTAAAGCTCTTTGGCTTCCACGTCCATGAATTGATGGAAGATGATGACAATTCCTCCGCCGCCACTGCCAGATCAACCCCATCTCCCTCCTCCGACTCCGGCGGAGGCGGTGGTGGCGGCGGCGACCGCAAATACGAGTGCCAGTACTGCTACAGAGAGTTCGCCAACTCCCAGGCCCTGGGCGGCCACCAAAATGCCCACAAGAAAGAGCGGCAGCAGCTCAAACGCGCCCAATTGCAAGCCTCCCGAAACGCCGCCGTTTTCAGAAACCCCATCGTCTCCGCCTTCGTCCCCCCGCCCCACCTCCTCTCCGCCGCCGCCACCGCCCAGGCCCATCTCGTCGTCCCCTCCTCCGCCACGTCACCCTCCTGGGTCTACATGCCCCGGGCCCCACCCCAGTTCCAGGTCTCCCACGGCTGCCTCTTCAACAACAACCCCTCCGCCGCCACTCCGCCCTACGCCGCCGCCCCTCCGCCGCCGTTGCCATTCACGATGCGCTCCCACGACGCCCCTTCGCTGAGCCGGTTCTCCAGGGTCGAAGGCGGAACCGGGTTCGAGGATGGACCGGGGTTGGATTTACATCTGGGCCTCGCGCCGGCCGCCCCATCAAGGCCGGAGGGTTAA

Coding sequence (CDS)

ATGGCTGCCCTGGATCATTACCAAGCCAAGCAAACCCGCTTAAAGCTCTTTGGCTTCCACGTCCATGAATTGATGGAAGATGATGACAATTCCTCCGCCGCCACTGCCAGATCAACCCCATCTCCCTCCTCCGACTCCGGCGGAGGCGGTGGTGGCGGCGGCGACCGCAAATACGAGTGCCAGTACTGCTACAGAGAGTTCGCCAACTCCCAGGCCCTGGGCGGCCACCAAAATGCCCACAAGAAAGAGCGGCAGCAGCTCAAACGCGCCCAATTGCAAGCCTCCCGAAACGCCGCCGTTTTCAGAAACCCCATCGTCTCCGCCTTCGTCCCCCCGCCCCACCTCCTCTCCGCCGCCGCCACCGCCCAGGCCCATCTCGTCGTCCCCTCCTCCGCCACGTCACCCTCCTGGGTCTACATGCCCCGGGCCCCACCCCAGTTCCAGGTCTCCCACGGCTGCCTCTTCAACAACAACCCCTCCGCCGCCACTCCGCCCTACGCCGCCGCCCCTCCGCCGCCGTTGCCATTCACGATGCGCTCCCACGACGCCCCTTCGCTGAGCCGGTTCTCCAGGGTCGAAGGCGGAACCGGGTTCGAGGATGGACCGGGGTTGGATTTACATCTGGGCCTCGCGCCGGCCGCCCCATCAAGGCCGGAGGGTTAA

Protein sequence

MAALDHYQAKQTRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGGGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPRAPPQFQVSHGCLFNNNPSAATPPYAAAPPPPLPFTMRSHDAPSLSRFSRVEGGTGFEDGPGLDLHLGLAPAAPSRPEG

Homology

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BLAST of Moc04g26680 vs. NCBI nr
Match: XP_038875418.1 (zinc finger protein GIS3-like [Benincasa hispida])

HSP 1 Score: 254.2 bits (648), Expect = 1.0e-63
Identity = 155/240 (64.58%), Postives = 168/240 (70.00%), Query Frame = 0


Query: 1   MAALD-HYQAKQ--------TRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGG-- 60
           MAAL+ HYQ+KQ        TRLKLFGF V E +EDD       +  TPS SSDSGGG  
Sbjct: 1   MAALENHYQSKQNNNNNNPATRLKLFGFDVQEDLEDD-------SAPTPSASSDSGGGLT 60

Query: 61  ------GGGGGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRN 120
                     GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRN
Sbjct: 61  PASAAAPPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRN 120

Query: 121 PIVSAFVPPPHLLSAAATAQAHLVVPSSATSPSW-VYMPRAPPQFQVSHGCLFNNNPSAA 180
           PIVSAF PPPHLL +AA         S  +S SW VY+PR PPQFQVSHGC+F ++  A 
Sbjct: 121 PIVSAFAPPPHLLPSAAA--------SVTSSSSWPVYIPRVPPQFQVSHGCVFTHSSYAD 180

Query: 181 TPPYAAAPPPPLPFTMRSH------DAP-SLSRFSRVEGGTGFEDGPGLDLHLGLAPAAP 216
            PP    PPPP  F M S       DAP SLSRFS+V+GGTGF+DGPGLDLHL LAPAAP
Sbjct: 181 APP----PPPPPDFFMGSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 221

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BLAST of Moc04g26680 vs. NCBI nr
Match: XP_023551731.1 (zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.0 bits (637), Expect = 1.9e-62
Identity = 151/247 (61.13%), Postives = 163/247 (65.99%), Query Frame = 0


Query: 1   MAALDHYQAK------QTRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGG- 60
           MAALDH+Q K       TRLKLFGF V E  EDD          TPS SSDSGGGG GG 
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSG-------RTPSGSSDSGGGGVGGG 60

Query: 61  -------------GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV 120
                        G+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV
Sbjct: 61  GGGGGGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV 120

Query: 121 FRNPIVSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPRAPPQFQVSHGCLFNNNPS 180
            RNPIVSAF PP HLL +          P++ +S SWVYMPRAPPQFQVSHG +F     
Sbjct: 121 LRNPIVSAFSPPLHLLPS----------PAATSSASWVYMPRAPPQFQVSHGSVF----- 180

Query: 181 AATPPYAAAPPPPLP------FTMRSH------DAPSLSRFSRVEGGTGFEDGPGLDLHL 216
             TP Y  APP P P      F++ S       D PSLSRFS+ EGG+GF+DGPGLDLHL
Sbjct: 181 --TPAYVEAPPQPPPPSAAAFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHL 223

[Close]

BLAST of Moc04g26680 vs. NCBI nr
Match: XP_022971807.1 (zinc finger protein GIS3-like [Cucurbita maxima])

HSP 1 Score: 249.2 bits (635), Expect = 3.3e-62
Identity = 150/243 (61.73%), Postives = 162/243 (66.67%), Query Frame = 0


Query: 1   MAALDHYQAK------QTRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGG- 60
           MAALDH+Q K       TRLKLFGF V E  EDD          TPS SSDSGGGG GG 
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSG-------RTPSGSSDSGGGGVGGG 60

Query: 61  ---------GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNP 120
                    G+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV RNP
Sbjct: 61  GGGAAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120

Query: 121 IVSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPRAPPQFQVSHGCLFNNNPSAATP 180
           IVSAF PP HLL +          P++ +S SWVYMPRAPPQFQVSHG +F       TP
Sbjct: 121 IVSAFSPPLHLLPS----------PAATSSASWVYMPRAPPQFQVSHGSVF-------TP 180

Query: 181 PYAAAPPPPLP------FTMRSH------DAPSLSRFSRVEGGTGFEDGPGLDLHLGLAP 216
            Y  APP P P      F++ S       D PSLSRFS+ EGG+G +DGPGLDLHL LAP
Sbjct: 181 AYVEAPPQPPPPSAAAFFSIGSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAP 219

[Close]

BLAST of Moc04g26680 vs. NCBI nr
Match: XP_022962365.1 (zinc finger protein GIS3-like [Cucurbita moschata] >KAG6601815.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248.8 bits (634), Expect = 4.3e-62
Identity = 151/250 (60.40%), Postives = 163/250 (65.20%), Query Frame = 0


Query: 1   MAALDHYQAK------QTRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGG- 60
           MAALDH+Q K       TRLKLFGF V E  EDD          TPS SSDSGGGG GG 
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSG-------RTPSGSSDSGGGGVGGG 60

Query: 61  ----------------GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRN 120
                           G+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRN
Sbjct: 61  GGGGGGGGGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRN 120

Query: 121 AAVFRNPIVSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPRAPPQFQVSHGCLFNN 180
           AAV RNPIVSAF PP HLL +          P++ +S SWVYMPRAPPQFQVSHG +F  
Sbjct: 121 AAVLRNPIVSAFSPPLHLLPS----------PAATSSASWVYMPRAPPQFQVSHGSVF-- 180

Query: 181 NPSAATPPYAAAPPPPLP------FTMRSH------DAPSLSRFSRVEGGTGFEDGPGLD 216
                TP Y  APP P P      F++ S       D PSLSRFS+ EGG+GF+DGPGLD
Sbjct: 181 -----TPAYVEAPPQPPPPSAAAFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLD 226

[Close]

BLAST of Moc04g26680 vs. NCBI nr
Match: KAG7016810.1 (Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.1 bits (632), Expect = 7.3e-62
Identity = 151/252 (59.92%), Postives = 163/252 (64.68%), Query Frame = 0


Query: 1   MAALDHYQAK------QTRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGG- 60
           MAALDH+Q K       TRLKLFGF V E  EDD          TPS SSDSGGGG GG 
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSG-------RTPSGSSDSGGGGVGGG 60

Query: 61  ------------------GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQAS 120
                             G+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQAS
Sbjct: 61  GGGGGGGGGGGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQAS 120

Query: 121 RNAAVFRNPIVSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPRAPPQFQVSHGCLF 180
           RNAAV RNPIVSAF PP HLL +          P++ +S SWVYMPRAPPQFQVSHG +F
Sbjct: 121 RNAAVLRNPIVSAFSPPLHLLPS----------PAATSSASWVYMPRAPPQFQVSHGSVF 180

Query: 181 NNNPSAATPPYAAAPPPPLP------FTMRSH------DAPSLSRFSRVEGGTGFEDGPG 216
                  TP Y  APP P P      F++ S       D PSLSRFS+ EGG+GF+DGPG
Sbjct: 181 -------TPAYVEAPPQPPPPSAAAFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPG 228

[Close]

BLAST of Moc04g26680 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-40
Identity = 120/240 (50.00%), Postives = 138/240 (57.50%), Query Frame = 0


Query: 12  TRLKLFGFHVHELMEDDDNSSAATARSTPSP---------SSDSG------GGGGGGGDR 71
           +RLKLFGF V +  ED  + S  T  S+ SP         S  SG      GGGGGGG+R
Sbjct: 13  SRLKLFGFSV-DGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGGGGGER 72

Query: 72  KYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV-----------FRNPI 131
           KYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA             RNPI
Sbjct: 73  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 132

Query: 132 VSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPR-APPQFQVSHGCLFNNNPSAA-- 191
           VSAF PPPHLLS++A       VP     P W+Y+PR +P Q  VSHGC+  +    A  
Sbjct: 133 VSAFAPPPHLLSSSA-------VPQPMGGP-WMYLPRVSPSQLHVSHGCVIQDGSGGAGA 192

Query: 192 ---TPPYAAAPP------PPLPFTMRSHDAPSLSRFSRVEGGTGFEDGPGLDLHLGLAPA 214
              +  Y A           +         PS++ FSR E GT F+DG GLDLHL LAPA
Sbjct: 193 GGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSLAPA 242

[Close]

BLAST of Moc04g26680 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.9e-23
Identity = 85/210 (40.48%), Postives = 106/210 (50.48%), Query Frame = 0


Query: 14  LKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGGGDRKYECQYCYREFANSQAL 73
           LKLFG ++ E       +S     S P P     G G G   RKYECQYC REFANSQAL
Sbjct: 8   LKLFGINLLE------TTSVQNQSSEPRP-----GSGSGSESRKYECQYCCREFANSQAL 67

Query: 74  GGHQNAHKKERQQLKRAQLQASR------NAAVFRNPIVSAFVPPPHLLSAAATAQAHLV 133
           GGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAF P PHLLS       H++
Sbjct: 68  GGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLS-QPHPPPHMM 127

Query: 134 VPSSATSPSWVYMPRAPPQFQVSHGCLFNNNPSAATPPYAAAPPPPLPFTMRSH--DAPS 193
           +  S++S  W+Y      Q  V +   F+                 +   +++H    P 
Sbjct: 128 LSPSSSSSKWLYGEHMSSQNAVGY---FHGGRG-----LYGGGMESMAGEVKTHGGSLPE 187

Query: 194 LSRF---SRVEGGTGFEDGPGLDLHLGLAP 213
           + RF   S    G   E+G GLDLHL L P
Sbjct: 188 MRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of Moc04g26680 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 14  LKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGGGDRKYECQYCYREFANSQAL 73
           +KLFGF   EL+         TA S  S ++ +         +++ECQYC +EFANSQAL
Sbjct: 23  IKLFGF---ELISGSRTPEITTAESVSSSTNTT----SLTVMKRHECQYCGKEFANSQAL 82

Query: 74  GGHQNAHKKERQQLKRAQLQASRNAAVF-----RNPIVSAF 110
           GGHQNAHKKER + KR QLQA R +  +     + PI ++F
Sbjct: 83  GGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of Moc04g26680 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 4   LDHYQAKQTRLKLFGFHV---HELMEDDDNSSAATARSTPSPSSDSGGGGGGGGDRKYEC 63
           ++ +  K+  ++LFGF     HE  E  DN +     +  S   D+        +++++C
Sbjct: 9   VNSFSPKERPIRLFGFEFGASHEESESKDNYN----ENNESIKDDN-------KEKRFKC 68

Query: 64  QYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF 102
            YC+R F  SQALGGHQNAHK+ERQQ KR  L +  NAA F
Sbjct: 69  HYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHS--NAAAF 96

[Close]

BLAST of Moc04g26680 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-06
Identity = 38/98 (38.78%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 10  KQTRLKLFGFHVHELMEDD-DNSSA------ATARSTPSPSS--------DSGGGGGGGG 69
           K   ++LFG    EL+ D+ DN SA       T ++  S  +        D         
Sbjct: 35  KAAIIRLFG---QELVGDNSDNLSAEPSDHQTTTKNDESSENIKDKDKEKDKDKDKDNNN 94

Query: 70  DRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQL 93
           +R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  +
Sbjct: 95  NRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSM 129

[Close]

BLAST of Moc04g26680 vs. ExPASy TrEMBL
Match: A0A6J1I2Z4 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111470485 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.6e-62
Identity = 150/243 (61.73%), Postives = 162/243 (66.67%), Query Frame = 0


Query: 1   MAALDHYQAK------QTRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGG- 60
           MAALDH+Q K       TRLKLFGF V E  EDD          TPS SSDSGGGG GG 
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSG-------RTPSGSSDSGGGGVGGG 60

Query: 61  ---------GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNP 120
                    G+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV RNP
Sbjct: 61  GGGAAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120

Query: 121 IVSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPRAPPQFQVSHGCLFNNNPSAATP 180
           IVSAF PP HLL +          P++ +S SWVYMPRAPPQFQVSHG +F       TP
Sbjct: 121 IVSAFSPPLHLLPS----------PAATSSASWVYMPRAPPQFQVSHGSVF-------TP 180

Query: 181 PYAAAPPPPLP------FTMRSH------DAPSLSRFSRVEGGTGFEDGPGLDLHLGLAP 216
            Y  APP P P      F++ S       D PSLSRFS+ EGG+G +DGPGLDLHL LAP
Sbjct: 181 AYVEAPPQPPPPSAAAFFSIGSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAP 219

[Close]

BLAST of Moc04g26680 vs. ExPASy TrEMBL
Match: A0A6J1HEU6 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111462831 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.1e-62
Identity = 151/250 (60.40%), Postives = 163/250 (65.20%), Query Frame = 0


Query: 1   MAALDHYQAK------QTRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGG- 60
           MAALDH+Q K       TRLKLFGF V E  EDD          TPS SSDSGGGG GG 
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSG-------RTPSGSSDSGGGGVGGG 60

Query: 61  ----------------GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRN 120
                           G+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRN
Sbjct: 61  GGGGGGGGGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRN 120

Query: 121 AAVFRNPIVSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPRAPPQFQVSHGCLFNN 180
           AAV RNPIVSAF PP HLL +          P++ +S SWVYMPRAPPQFQVSHG +F  
Sbjct: 121 AAVLRNPIVSAFSPPLHLLPS----------PAATSSASWVYMPRAPPQFQVSHGSVF-- 180

Query: 181 NPSAATPPYAAAPPPPLP------FTMRSH------DAPSLSRFSRVEGGTGFEDGPGLD 216
                TP Y  APP P P      F++ S       D PSLSRFS+ EGG+GF+DGPGLD
Sbjct: 181 -----TPAYVEAPPQPPPPSAAAFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLD 226

[Close]

BLAST of Moc04g26680 vs. ExPASy TrEMBL
Match: A0A0A0KRQ5 (Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucumis sativus OX=3659 GN=Gl-3 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 152/234 (64.96%), Postives = 165/234 (70.51%), Query Frame = 0


Query: 1   MAALD-HYQAKQ-------TRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGG 60
           MAAL+ HYQ KQ       TRLKLFGF V E ++ DD        STP+ SSDSG     
Sbjct: 1   MAALENHYQTKQNNNNPATTRLKLFGFDVQEDLDQDD--------STPT-SSDSGAAVPS 60

Query: 61  GGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFVPP 120
            GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AF PP
Sbjct: 61  SGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFAPP 120

Query: 121 PHLLSAAATAQAHLVVPSSATSPSW-VYMPRAPPQFQVSHGCLFNNNPSAATPPYAAAPP 180
           PHLL +AA             S SW VY+PRAPPQFQVSHGC+F   PS++      APP
Sbjct: 121 PHLLPSAAV----------TASSSWPVYIPRAPPQFQVSHGCVF--TPSSSYGGGGDAPP 180

Query: 181 PPLP---FTMRSH------DAP-SLSRFSRVEGGTGFEDGPGLDLHLGLAPAAP 216
           PP P   FTM S       DAP SLSRFS+V+GGT F+DGPGLDLHL LAPAAP
Sbjct: 181 PPSPPDFFTMGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 213

[Close]

BLAST of Moc04g26680 vs. ExPASy TrEMBL
Match: A0A5D3BNG5 (Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00130 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.0e-61
Identity = 152/235 (64.68%), Postives = 165/235 (70.21%), Query Frame = 0


Query: 1   MAALD-HYQAKQ--------TRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGG 60
           MAAL+ HYQ KQ        TRLKLFGF V E ++ DD        STP+ SSDSG    
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDD--------STPT-SSDSGAAVP 60

Query: 61  GGGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFVP 120
             GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AF P
Sbjct: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFAP 120

Query: 121 PPHLLSAAATAQAHLVVPSSATSPSW-VYMPRAPPQFQVSHGCLFNNNPSAATPPYAAAP 180
           PPHLL +AA             S SW VY+PRAPPQFQVSHGC+F   PS++      AP
Sbjct: 121 PPHLLPSAAV----------TASSSWPVYIPRAPPQFQVSHGCVF--TPSSSYGGGVDAP 180

Query: 181 PPPLP---FTMRSH------DAP-SLSRFSRVEGGTGFEDGPGLDLHLGLAPAAP 216
           PPP P   FTM S       DAP SLSRFS+V+GGT F+DGPGLDLHL LAPAAP
Sbjct: 181 PPPSPPDFFTMGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of Moc04g26680 vs. ExPASy TrEMBL
Match: A0A1S3CSY8 (zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103504603 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.0e-61
Identity = 152/235 (64.68%), Postives = 165/235 (70.21%), Query Frame = 0


Query: 1   MAALD-HYQAKQ--------TRLKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGG 60
           MAAL+ HYQ KQ        TRLKLFGF V E ++ DD        STP+ SSDSG    
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDD--------STPT-SSDSGAAVP 60

Query: 61  GGGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFVP 120
             GDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AF P
Sbjct: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFAP 120

Query: 121 PPHLLSAAATAQAHLVVPSSATSPSW-VYMPRAPPQFQVSHGCLFNNNPSAATPPYAAAP 180
           PPHLL +AA             S SW VY+PRAPPQFQVSHGC+F   PS++      AP
Sbjct: 121 PPHLLPSAAV----------TASSSWPVYIPRAPPQFQVSHGCVF--TPSSSYGGGGDAP 180

Query: 181 PPPLP---FTMRSH------DAP-SLSRFSRVEGGTGFEDGPGLDLHLGLAPAAP 216
           PPP P   FTM S       DAP SLSRFS+V+GGT F+DGPGLDLHL LAPAAP
Sbjct: 181 PPPSPPDFFTMGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of Moc04g26680 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-41
Identity = 120/240 (50.00%), Postives = 138/240 (57.50%), Query Frame = 0


Query: 12  TRLKLFGFHVHELMEDDDNSSAATARSTPSP---------SSDSG------GGGGGGGDR 71
           +RLKLFGF V +  ED  + S  T  S+ SP         S  SG      GGGGGGG+R
Sbjct: 13  SRLKLFGFSV-DGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGGGGGER 72

Query: 72  KYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV-----------FRNPI 131
           KYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA             RNPI
Sbjct: 73  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 132

Query: 132 VSAFVPPPHLLSAAATAQAHLVVPSSATSPSWVYMPR-APPQFQVSHGCLFNNNPSAA-- 191
           VSAF PPPHLLS++A       VP     P W+Y+PR +P Q  VSHGC+  +    A  
Sbjct: 133 VSAFAPPPHLLSSSA-------VPQPMGGP-WMYLPRVSPSQLHVSHGCVIQDGSGGAGA 192

Query: 192 ---TPPYAAAPP------PPLPFTMRSHDAPSLSRFSRVEGGTGFEDGPGLDLHLGLAPA 214
              +  Y A           +         PS++ FSR E GT F+DG GLDLHL LAPA
Sbjct: 193 GGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSLAPA 242

[Close]

BLAST of Moc04g26680 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 109.0 bits (271), Expect = 4.9e-24
Identity = 85/210 (40.48%), Postives = 106/210 (50.48%), Query Frame = 0


Query: 14  LKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGGGDRKYECQYCYREFANSQAL 73
           LKLFG ++ E       +S     S P P     G G G   RKYECQYC REFANSQAL
Sbjct: 8   LKLFGINLLE------TTSVQNQSSEPRP-----GSGSGSESRKYECQYCCREFANSQAL 67

Query: 74  GGHQNAHKKERQQLKRAQLQASR------NAAVFRNPIVSAFVPPPHLLSAAATAQAHLV 133
           GGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAF P PHLLS       H++
Sbjct: 68  GGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLS-QPHPPPHMM 127

Query: 134 VPSSATSPSWVYMPRAPPQFQVSHGCLFNNNPSAATPPYAAAPPPPLPFTMRSH--DAPS 193
           +  S++S  W+Y      Q  V +   F+                 +   +++H    P 
Sbjct: 128 LSPSSSSSKWLYGEHMSSQNAVGY---FHGGRG-----LYGGGMESMAGEVKTHGGSLPE 187

Query: 194 LSRF---SRVEGGTGFEDGPGLDLHLGLAP 213
           + RF   S    G   E+G GLDLHL L P
Sbjct: 188 MRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of Moc04g26680 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 14  LKLFGFHVHELMEDDDNSSAATARSTPSPSSDSGGGGGGGGDRKYECQYCYREFANSQAL 73
           +KLFGF   EL+         TA S  S ++ +         +++ECQYC +EFANSQAL
Sbjct: 23  IKLFGF---ELISGSRTPEITTAESVSSSTNTT----SLTVMKRHECQYCGKEFANSQAL 82

Query: 74  GGHQNAHKKERQQLKRAQLQASRNAAVF-----RNPIVSAF 110
           GGHQNAHKKER + KR QLQA R +  +     + PI ++F
Sbjct: 83  GGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of Moc04g26680 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 4   LDHYQAKQTRLKLFGFHV---HELMEDDDNSSAATARSTPSPSSDSGGGGGGGGDRKYEC 63
           ++ +  K+  ++LFGF     HE  E  DN +     +  S   D+        +++++C
Sbjct: 9   VNSFSPKERPIRLFGFEFGASHEESESKDNYN----ENNESIKDDN-------KEKRFKC 68

Query: 64  QYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF 102
            YC+R F  SQALGGHQNAHK+ERQQ KR  L +  NAA F
Sbjct: 69  HYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHS--NAAAF 96

[Close]

BLAST of Moc04g26680 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 )

HSP 1 Score: 52.8 bits (125), Expect = 4.2e-07
Identity = 38/98 (38.78%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 10  KQTRLKLFGFHVHELMEDD-DNSSA------ATARSTPSPSS--------DSGGGGGGGG 69
           K   ++LFG    EL+ D+ DN SA       T ++  S  +        D         
Sbjct: 35  KAAIIRLFG---QELVGDNSDNLSAEPSDHQTTTKNDESSENIKDKDKEKDKDKDKDNNN 94

Query: 70  DRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQL 93
           +R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  +
Sbjct: 95  NRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSM 129

The following BLAST results are available for this feature:

BLAST of Moc04g26680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875418.1	1.0e-63	64.58	zinc finger protein GIS3-like [Benincasa hispida]	[more]
XP_023551731.1	1.9e-62	61.13	zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971807.1	3.3e-62	61.73	zinc finger protein GIS3-like [Cucurbita maxima]	[more]
XP_022962365.1	4.3e-62	60.40	zinc finger protein GIS3-like [Cucurbita moschata] >KAG6601815.1 Zinc finger pro...	[more]
KAG7016810.1	7.3e-62	59.92	Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Moc04g26680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9H1	2.1e-40	50.00	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	6.9e-23	40.48	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q39264	3.0e-10	44.55	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	2.0e-09	39.60	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
P93751	5.9e-06	38.78	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]

BLAST of Moc04g26680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2Z4	1.6e-62	61.73	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111470485 PE=4 S...	[more]
A0A6J1HEU6	2.1e-62	60.40	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111462831 PE=4...	[more]
A0A0A0KRQ5	2.3e-61	64.96	Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucu...	[more]
A0A5D3BNG5	3.0e-61	64.68	Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CSY8	3.0e-61	64.68	zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103504603 PE=4 SV=1	[more]

BLAST of Moc04g26680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68360.1	1.5e-41	50.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	4.9e-24	40.48	zinc finger protein 6	[more]
AT1G10480.1	2.1e-11	44.55	zinc finger protein 5	[more]
AT5G06650.1	1.4e-10	39.60	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G41940.1	4.2e-07	38.78	zinc finger protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 58..83 e-value: 1.4E-5 score: 25.0
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 49..103 e-value: 7.6E-8 score: 34.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..46
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 7..215
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 7..215
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 60..80
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 58..85 score: 11.676262
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 54..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g26680.1	Moc04g26680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding