Moc04g25740 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g25740
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Locationchr4: 18669792 .. 18675788 (-)
RNA-Seq ExpressionMoc04g25740
SyntenyMoc04g25740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGACTCAAATCGAGGCTGACGTTACGAGCTATACACTCTTACCACCATCCCAATCTCCGAAATTCTCACCAATATGAGGAGACTGGGATGAGAAGCTTCTCAAACGCCCTAGGAAGCTTAAAGGAGATCCAGAAAAATGAGATAAAGGGAAGTATTACCGATTTTATAAAGACCACGGCCATGATACCTCAAGCTATTTCGAGCTCAAATGCCAGATTGAAGAGCTCATTCAAAATGGCCACTTCAAGAACTTCGTTGGTAAGCCTAAATCGAACTTTTCAGAAAAGAAGGATGAAAGGCGATGTTCAAGGACGCTGCGACTTGCCATCTTTAGAGGCCCAAGTGGGAGTAAGTCAGGGAACAAGATGAATGAGCTGGCACAGGAGGCAAGACATGACATCTGTGGAGTTCGACTTGCCTGATCTTCTTCTCTGATTCTAACCTAGATGGTGCCATTTCCCTCATAATGATGCTCTGGTGATCTCTACTATGATTAACCATGTACAGGTCAGAAAGGTGCTCATTGAAGGAGGAGCATCCGCCAACATTTTGTCCTTGACTACTTACACTACCTTGGGATGGACTAGGGCACAGTTGAAGAAGAGTCTGACCCTCCTGGTCAGATCCTTGCGGAGACAATCATACCAGAAGGCTGCATTGATCTCCGAGTTGCAATTGGTCAGAGTGACACCCAAGTCACCAAGATGGTCGAGTTCGTGGCGGTCGATGGCAAGTCGACCTACAATGTCATATTTGGCTGATCTATAATCCATGCACTCCAATCCATACCTTCAACAGCTCACCAAGCCCTGAAGTATTCGACTCCCAATGGGATTGACATTGTCCACTTCACGAGAGTGCTATGTTGTAGCTTTCAAAGAGTTGGAAGTTTGTGTTATAGCTGAAGCGGCCAACCTGTCTAAAGAACTCCACCCAGAATACGCCTTGCCAGTGGAGAAGCTTGAGCTTGTTCGTTCCTTTACTTAATCCTATAAAACAAGTCAGCATAGGTACCAAGCTGGGGGCCACAGATAGGGAAGAGCTCATCAAGTTCTTAAGGGCAAATGTAGATGTCTTTGCATGGTCTTACGAAGACATGTCAGACATCAACCCCAAAGTGGTGGTGCATCGCCTCAACATCGACCCATCATTCTGACGTATGAAGCAAAAGAGAAGACCTGTAAATAGGGAGATGAGTGATGTAATTGTTGAGGAAGTAAGCAAATTGTTAAAAGCTGAATATATAAAAGAAGTTCTATATCTCAAATAGCTCTCTAACACAGTCTCAATAGGAAGTGGAGAATGTGCGTAGATTTTACCAACTTAAATGGTGCGTGCCCTAAAGACTGCTTCCCACTTTCTTGCATCGACCAGCTCGTAGACGCAACGATCGGACACGAGCTGCTTCCATTTATAGATGTCTACTGTCTTATCCATTACACAAGCAAGGCCATGACCGAGGCCAAGACCAGATACCTTCATATGGAGAAACTGGTCCTCACCTTGGTAATTGTCGCGCGACGCCTCAGGCCTTACTTCCAAGCTCATCTAGTGATAGTGCTCACCAACCTTCCGTTGAAGTAGGTCTTCCACAAGCCTGAAACCTCAGGTCAATTCATGAAGTGAGCGGTGGAGCTAAGTGAGTACGATATCTTGTTCATACCACGAACAACTATGAAGGGTGAAGTAGTGGCTGACTTCATAGCCGAGCTTACTTAAGGGATCGAATCCTAAGCGGAAGCGTTTTATCGCTTGTGATTCAATTTGGTTTTAGAAGAGGAGCGATACTGGTTCTTATAAAAACAGAACAATTCTATTTAGAACCGAGGTTAAGCCTCATGGGGAATAAGAAAACCACTTACTTTTGAAGACCATTGGCAGATTCTTTTCCTCGAGCACGAGCGTCGTGATAGAACGAACAAAAACTCCCGAATGCGTGATTGAACACCACCACCAAGTTACCTCGCCATGTCTCAAGGACTTAAGAACGGGATTGTAGTATCTCGTATCTTGGAGCAATGAGAACTAAAAGAAATGAATTGAGAATCAATTTTTGTGAGAGAGAGCGTATTCTTCCTTTTTGATCAACAACCTCAAAACATAGGGAAATTCCCTATGTTTTATAATGAAAGGAGGGAAGAAACTTCCCCTCTCCCCCTCACCACTTTCCCAACAAAATTATTGGGGTGGTGAGTTTGTTAATTATGGATTATATCTATAATTTACAAATATATATATATATATATATTAATTTAATTTAATAATTAATTAAATTAAAACTATTTTAATTTAATTAATAATTAATTAAATTTTATTTATTTAATTAATTAAATAAATATAACTAAATCATATTTAATTAAATAAATAAATATTTGAATCATATTCAAATATACATTTCCCTCAAAACCTATAGTATTTAATATGAATCTAATTCACATTAAATTTTAACCTATAGTAATAATAGGAATCCTATTCATATTATTCTCTCATAATATATAGTTTTATAATGTATCATCATACATTATCTTAAATTGCGTCATACACAATTAACTCGAATTTCCTTTAATTAAATTTGAACAATTCAAATTACTTTCCAAGATTTTATGTTCTTAATTACCCTTTACGAGCTAGCAAGGGAACCTAATAGACCCATAGATTAGAAGCTCCAACGTTACGAGATTAATTTGGTTAAACTCATTAACCACCTTAATCAACATACATTAACTACGGGTTACTCCACTAAAAACCCGCAGCTAAACTCTTCTCTTCTCACTATAGATTATTTCTATGTCCATGGATATCGACCACTAATGGCAAGTCAATCCTTCACGAATGCTCGTAACTCAAGCTGGGTTAAATTACCATTTTACCCCTGAGCTACATTTTACTCCTTAAATACCATTACTCCTCTAATAAATAACCCGATTATGGTCCGACCAGTAACCGAAAGTTCCTCTCGAGCCAGTGAGAGAGTGTGGCCCCTTGTTCAAGTCCCAGAGTCAGCATCTAAGAGAACACTCATCTACTCCCCTAAAGTCGGGCAGGAGTGAATTTCATCTTGTGAAGTTATATTTCCAGCTCCCCACTCGGTCTCGTCCTCAAAATGGTAGGAATATTGAGTCGGCGACTCGAGCCACTCTCACCCATACAGATCAAAGGACAAGTCCTCACGGGCAGGAGTCCATAGCTCACTCAGGATTGAGAATGAGTTGCCTGGTCATCCTATGAAATAGCAATCTGTTAGTTAACAGCGTTACATCTAAAGATTGATTATTTCGTGATCTGGTCTTATACAAACTCATTGTATAGGATACCCCGTGTTAGGGTTGACTTTTTACTGCAAAAACATATGTCGGTAGTCCTATTTGACCACGTTTTTGACCCATTTCCACTATTATTTGCCAAAAAGGACCACATATTCTTAAAGTAGAACATACATAGATTATTTCTGCATAAAAGTCAAACTATGGTACTTTAGGAAAAATATGAGATAAATGCGGTCAAAGTTGGAAGAAAATAACAGAATTCTGTTTTTTTGCAGAATTGCGCCCGGCGCATTTTTGGAGGGCAATTTGTCAAAACGCACGTTTTGATTAATGAAGGGCAAGGAGGACATTTCCCACATGTTCAAAACCGTGAGTCCAACTCCAAGTCAGGTGGTTAGGTGAATCTGAACCCTTTTCCACCTAAAATGGAGGGGAGTTTCAACCAACCTATGGTGCTATAAAAGGAAGTCATCCATCCCTCAGCAAATCATCTCTTCCAAGCTTCATTTCATCTTCTTTTAGATGCTCTCTAGTTGTAGAATACGTTTTTAGGGTTTATATTCATGTTCTAGTTGTTCATTTCTTTGTTCTTCACGCTTTTACCTTTCGTATTGCCTTTAATTCAAGTTCTTACTTCCGTTCTTTGTTCATTATGTTCTTTTAAATTTTTTAGCGAGTTTCAACTCCCCTCACGCTCGAGAGAGAAGAGGGTCAAGCTAAAACTCCTTGTACGACTTATTTATTCATTTAAATTCAATGAAAAATACTTTCTTATTGTTTTCGTGCATTTACTTTCATTTAATTATGTTCTAAATTAGTTATCAACCTCCTTGTGGAATGCCTTAGTCAAATGATTTGATTTTCAACACGCTCGGGATTTTGGCCAGATTTCGCCTAACACTTTTTTGGGTTGGTTTCTAAAAACTTCTTTTTACGTCTTTTTTCCATTCGATCGGTGGGAACTTGATTTATACACCAAAGCCCAACCTTGGAAAAATGTGAGTTAGGTAAAATAATAGGAAACCAATATGGGATGTGACTTAGGAATAAGCGCATAAAACATGGTCCTAGGCATAGGCCCTCTGACCCATAATGCAAATGAGTAGGTAGATATTCTCTAGGATTGTAATCACACATAGAAATATGATTGTAGGTTACCCTAGCCTCTGCAGCAACCAAAAGTGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGCCAGAAATTGCGCCTAGTGCATTTTCCCAACATAGTGTGTTTTCCATGTTTTGCATCAAAACCAAGGTAGGAGACCAGGAGGTTGAGTTTTATTAAATTGCTTGTTAGTTAAAATCCCAAACAACAACATTTCATCACATTTTTCTTCCTAAATCACAATTGCATATTTGAATAATTTCACTACATTACTTGATTTTGAAAAGCAACAAGTCTCTGAGAATTCGACCTTGGATTACTTCCAAGTATTACTTGTGACCGTGTGTGCTTGCACGAGTCTCTAATCTTTTAAAAGGTAGAGAAAGTCCCAACACCCCCACTTGCATGTACCCACACGAATGACTTGGATTAAGTCGTCTCTAACATTTACAAAGTGGGCCGTATCCATAGTGTTGCTAGGATAAGGTACCCAACCTTATCCATATACTATAGACCCTTTAGGTTATTCACGGGATATTATCCACTTATATATCAGGAGTATATCAAATATATATCTAGTATATCGGGGGTATATCAATTATATACCCAGCATATCAAATATATACCCAATATATATATTGTCCCGGTTACCTGATAACCTTGGATGTTTAGTTTATTGGATTTTGGACAATGCAATGCTATGAATTCAACAACAAATTTATTGAATAAAACTTTATTGAATATACATTTGTTTTTACATAAATACAAACTACGAGTTTAGGACAACACACCCAACACTTACACCCCCAGTGACCTCGGACTCGGAGGGCGACCTTGAGTGGACCTTGTACATTGATGGTTCATCTAGCGACAGAGGATGTGAAGCAGGTGTGCTATTGCTCGCACTCGATGGCATGCATTTTGAGTATGCCTTGCGCAACAACTTTCGCACCTCAAACAATAAAGCCGAGTATGAAGCCCCTATTGGCTGGAATACGGATGGCCAAAGGGCTGGAGCGTATTATATCTAGGTATACAACGATTTAGAATTCATAGTGAATCAAATCAAGGAGGAGTACCAGGCGAAGGACTCCTGTATGTAGAAATACCTTAGTAAGGTCCAAGCACACCTTGCCCAATTTAAAATATTCAACAGTAGTTAGATACCGAGGTTCGAGAATTCAAACGTAGATGCCTTACTAAGTTAGCCTCTGCATATAAGATTGGCTTATCCAAGTCGATTCTAGTTGAAATACTTGATGCACCTTCAATTTAGAACCAGACGTGATGGAGATTTATTCCCAACCTCTGTCCTAGATGGATCTAATTAAGGCGTATCTTTCAGGTAGCGTTCCTGTAGATCCTAAAGAAGCTAAGAAGATCGACACTAAAGTAGCTCGGTACATACTCCGAGATGGAAACTTGTACAAGCGCGAATTTTTGCTACCTCTCATAAAAGGCTTGACCCTTAAAGACACAAACTACATCCTTAGAGAAGTACACGAGGGCTTTCTGCATTTAGCTTCTGCATACGAGACCAGCTTGTCCAATTCAATTCCAGTTAAAATACTTGATGCACCTTCAATTTAG

mRNA sequence

ATGTTTGGACTCAAATCGAGGCTGACGTTACGAGCTATACACTCTTACCACCATCCCAATCTCCGAAATTCTCACCAATATGAGGAGACTGGGATGAGAAGCTTCTCAAACGCCCTAGGAAGCTTAAAGGAGATCCAGAAAAATGAGATAAAGGGAAGTATTACCGATTTTATAAAGACCACGGCCATGATACCTCAAGCTATTTCGAGCTCAAATGCCAGATTGAAGAGCTCATTCAAAATGGCCACTTCAAGAACTTCGTTGGTAAGCCTAAATCGAACTTTTCAGAAAAGAAGGATGAAAGGCGATGTTCAAGGACGCTGCGACTTGCCATCTTTAGAGGCCCAAGTGGGAGTCAGAAAGGTGCTCATTGAAGGAGGAGCATCCGCCAACATTTTGTCCTTGACTACTTACACTACCTTGGGATGGACTAGGGCACAGTTGAAGAAGAGTCTGACCCTCCTGGTCAGATCCTTGCGGAGACAATCATACCAGAAGGCTGCATTGATCTCCGAGTTGCAATTGGTTACCCTAGCCTCTGCAGCAACCAAAAGTGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGCCAGAAATTGCGCCTAGTGCATTTTCCCAACATAGTGTGTTTTCCATGTTTTGCATCAAAACCAAGTTTAGGACAACACACCCAACACTTACACCCCCAGTGACCTCGGACTCGGAGGGCGACCTTGAGTGGACCTTGTACATTGATGGTTCATCTAGCGACAGAGGATGTGAAGCAGGTAGCGTTCCTGTAGATCCTAAAGAAGCTAAGAAGATCGACACTAAAGTAGCTCGGTACATACTCCGAGATGGAAACTTGTACAAGCGCGAATTTTTGCTACCTCTCATAAAAGGCTTGACCCTTAAAGACACAAACTACATCCTTAGAGAAGTACACGAGGGCTTTCTGCATTTAGCTTCTGCATACGAGACCAGCTTGTCCAATTCAATTCCAGTTAAAATACTTGATGCACCTTCAATTTAG

Coding sequence (CDS)

ATGTTTGGACTCAAATCGAGGCTGACGTTACGAGCTATACACTCTTACCACCATCCCAATCTCCGAAATTCTCACCAATATGAGGAGACTGGGATGAGAAGCTTCTCAAACGCCCTAGGAAGCTTAAAGGAGATCCAGAAAAATGAGATAAAGGGAAGTATTACCGATTTTATAAAGACCACGGCCATGATACCTCAAGCTATTTCGAGCTCAAATGCCAGATTGAAGAGCTCATTCAAAATGGCCACTTCAAGAACTTCGTTGGTAAGCCTAAATCGAACTTTTCAGAAAAGAAGGATGAAAGGCGATGTTCAAGGACGCTGCGACTTGCCATCTTTAGAGGCCCAAGTGGGAGTCAGAAAGGTGCTCATTGAAGGAGGAGCATCCGCCAACATTTTGTCCTTGACTACTTACACTACCTTGGGATGGACTAGGGCACAGTTGAAGAAGAGTCTGACCCTCCTGGTCAGATCCTTGCGGAGACAATCATACCAGAAGGCTGCATTGATCTCCGAGTTGCAATTGGTTACCCTAGCCTCTGCAGCAACCAAAAGTGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGCCAGAAATTGCGCCTAGTGCATTTTCCCAACATAGTGTGTTTTCCATGTTTTGCATCAAAACCAAGTTTAGGACAACACACCCAACACTTACACCCCCAGTGACCTCGGACTCGGAGGGCGACCTTGAGTGGACCTTGTACATTGATGGTTCATCTAGCGACAGAGGATGTGAAGCAGGTAGCGTTCCTGTAGATCCTAAAGAAGCTAAGAAGATCGACACTAAAGTAGCTCGGTACATACTCCGAGATGGAAACTTGTACAAGCGCGAATTTTTGCTACCTCTCATAAAAGGCTTGACCCTTAAAGACACAAACTACATCCTTAGAGAAGTACACGAGGGCTTTCTGCATTTAGCTTCTGCATACGAGACCAGCTTGTCCAATTCAATTCCAGTTAAAATACTTGATGCACCTTCAATTTAG

Protein sequence

MFGLKSRLTLRAIHSYHHPNLRNSHQYEETGMRSFSNALGSLKEIQKNEIKGSITDFIKTTAMIPQAISSSNARLKSSFKMATSRTSLVSLNRTFQKRRMKGDVQGRCDLPSLEAQVGVRKVLIEGGASANILSLTTYTTLGWTRAQLKKSLTLLVRSLRRQSYQKAALISELQLVTLASAATKSGSERVELKSQEKPEIAPSAFSQHSVFSMFCIKTKFRTTHPTLTPPVTSDSEGDLEWTLYIDGSSSDRGCEAGSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEGFLHLASAYETSLSNSIPVKILDAPSI
Homology
[Close]
BLAST of Moc04g25740 vs. NCBI nr
Match: XP_022143565.1 (uncharacterized protein LOC111013434 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-10
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEGFLHLA 316
           G VP DP+E KK+  K ARY+LRDG LY+R F LPL+K ++ +D  Y+LREVHEG     
Sbjct: 169 GKVPADPRETKKMTRKAARYLLRDGTLYRRGFCLPLLKCISKEDGYYVLREVHEGVCGNH 228

Query: 317 SAYETSLSNSIPVKIL 333
           S    SLS  +P ++L
Sbjct: 229 SR-ARSLSAKVPAELL 243

[Close]
BLAST of Moc04g25740 vs. NCBI nr
Match: XP_022149378.1 (uncharacterized protein LOC111017809 [Momordica charantia])

HSP 1 Score: 72.8 bits (177), Expect = 6.4e-09
Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG 312
           G++P DPKE KK+  KVA++ILRDG LY++ F LPL+K +T +D NYI+RE+HEG
Sbjct: 281 GNLPQDPKEHKKMARKVAQFILRDGALYRQGFSLPLLKCVTPEDGNYIIREIHEG 335

[Close]
BLAST of Moc04g25740 vs. NCBI nr
Match: XP_022157626.1 (uncharacterized protein LOC111024288 [Momordica charantia])

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-08
Identity = 30/55 (54.55%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG 312
           G++P++PKEAKK+  K ARY+LRD  +Y+R F LPL+K ++ +D +Y+L+EVHEG
Sbjct: 270 GNIPINPKEAKKMRRKTARYLLRDETMYQRGFSLPLLKCISKEDESYVLKEVHEG 324

[Close]
BLAST of Moc04g25740 vs. NCBI nr
Match: XP_022158591.1 (uncharacterized protein LOC111025048 [Momordica charantia])

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-08
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG 312
           G+ P D K  KK+  KVAR+ILRDG LY+R F LPL+K +TL+D NYI+RE+HEG
Sbjct: 381 GNPPQDSKAHKKMVQKVARFILRDGALYRRGFSLPLLKCVTLEDGNYIIREIHEG 435

[Close]
BLAST of Moc04g25740 vs. NCBI nr
Match: XP_022156791.1 (uncharacterized protein LOC111023625 [Momordica charantia])

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-08
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHE 311
           G VP DP+E KK+  K ARY+LRDG LY+R F LPL+K +  +D +Y+LREVHE
Sbjct: 270 GKVPADPRETKKMTRKAARYLLRDGTLYRRGFSLPLLKFIFEEDGHYVLREVHE 323

[Close]
BLAST of Moc04g25740 vs. ExPASy TrEMBL
Match: A0A6J1CP53 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013434 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-10
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEGFLHLA 316
           G VP DP+E KK+  K ARY+LRDG LY+R F LPL+K ++ +D  Y+LREVHEG     
Sbjct: 169 GKVPADPRETKKMTRKAARYLLRDGTLYRRGFCLPLLKCISKEDGYYVLREVHEGVCGNH 228

Query: 317 SAYETSLSNSIPVKIL 333
           S    SLS  +P ++L
Sbjct: 229 SR-ARSLSAKVPAELL 243

[Close]
BLAST of Moc04g25740 vs. ExPASy TrEMBL
Match: A0A6J1D6M1 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111017809 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-09
Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG 312
           G++P DPKE KK+  KVA++ILRDG LY++ F LPL+K +T +D NYI+RE+HEG
Sbjct: 281 GNLPQDPKEHKKMARKVAQFILRDGALYRQGFSLPLLKCVTPEDGNYIIREIHEG 335

[Close]
BLAST of Moc04g25740 vs. ExPASy TrEMBL
Match: A0A6J1DYR5 (uncharacterized protein LOC111024288 OS=Momordica charantia OX=3673 GN=LOC111024288 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.3e-09
Identity = 30/55 (54.55%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG 312
           G++P++PKEAKK+  K ARY+LRD  +Y+R F LPL+K ++ +D +Y+L+EVHEG
Sbjct: 270 GNIPINPKEAKKMRRKTARYLLRDETMYQRGFSLPLLKCISKEDESYVLKEVHEG 324

[Close]
BLAST of Moc04g25740 vs. ExPASy TrEMBL
Match: A0A6J1E1C7 (uncharacterized protein LOC111025048 OS=Momordica charantia OX=3673 GN=LOC111025048 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.9e-09
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG 312
           G+ P D K  KK+  KVAR+ILRDG LY+R F LPL+K +TL+D NYI+RE+HEG
Sbjct: 381 GNPPQDSKAHKKMVQKVARFILRDGALYRRGFSLPLLKCVTLEDGNYIIREIHEG 435

[Close]
BLAST of Moc04g25740 vs. ExPASy TrEMBL
Match: A0A6J1DW17 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023625 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.0e-09
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 257 GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHE 311
           G VP DP+E KK+  K ARY+LRDG LY+R F LPL+K +  +D +Y+LREVHE
Sbjct: 270 GKVPADPRETKKMTRKAARYLLRDGTLYRRGFSLPLLKFIFEEDGHYVLREVHE 323

The following BLAST results are available for this feature:
BLAST of Moc04g25740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022143565.13.4e-1051.32uncharacterized protein LOC111013434 [Momordica charantia][more]
XP_022149378.16.4e-0960.00uncharacterized protein LOC111017809 [Momordica charantia][more]
XP_022157626.11.1e-0854.55uncharacterized protein LOC111024288 [Momordica charantia][more]
XP_022158591.11.4e-0861.82uncharacterized protein LOC111025048 [Momordica charantia][more]
XP_022156791.11.9e-0859.26uncharacterized protein LOC111023625 [Momordica charantia][more]
BLAST of Moc04g25740 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc04g25740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CP531.6e-1051.32Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013434 PE=4 SV=1[more]
A0A6J1D6M13.1e-0960.00Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111017809 PE=4 SV=1[more]
A0A6J1DYR55.3e-0954.55uncharacterized protein LOC111024288 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1E1C76.9e-0961.82uncharacterized protein LOC111025048 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DW179.0e-0959.26Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023625 PE=4 SV=1[more]
BLAST of Moc04g25740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g25740.1Moc04g25740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity