Moc04g25730 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g25730
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr4: 18667760 .. 18668642 (+)
RNA-Seq Expression	Moc04g25730
Synteny	Moc04g25730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCTGATCTCAACCTCGGACCTATCAAGTTGAGGTATTCTGAGAAGTGGGCTTCCGGGCCGAACGACACACCTGGCCCCCAGAACTTGGTGGCCAGGTACCTGAAGGGCCTTGATTCCGAGGCCAAGGAGGATGAGAAGGATGAAGAGGAACCGACACAGGAGAGTGATGTCGTCCGCACCACTCAAGGCGAGGATAGAGCTACTCCCCACCCTACACGTATGGCTCCTTCTTCTCAAGAGGCAACACTTGTTGACTCACAGGAGGTCGACCTACTAGCTTCCCAAGGTGAGCTTGGTAGCATCTTTGAAGCTCTCCATCAATCATATGGCAGCTCTTTCTCCTTTTATTGCAAATTTTTTCATTGTTTTTATTTTTCTTTTTGTAAACTTTAGAGGACTGGGGCATATGTACCTTGGTCCTTTGATTTAATGAATCAATGCTTCTTTTTTTAATCCATTCCAAGCAATTTTTATTATTATGGTTGATCTTCTTGCTTGTCTATTGTTTAACTTTAGCTTAATATTGACTTGGAGTAAATAAGATGTTGAAAGTGCAATTTTTATTCATGTCACACCTCGCACCTTGTTTGGAGTTGATGAGTGTAGATATTCATGTCGTACCTTTCACCTTAGGACCTGTGGCATGTAGCCCCCATTTCATTCAAAGTCGAACCTTTTAAAAAATAAGACACAGAATCAAATCAATGAGATAGCTTTTATTATTTTACCCTGAATATTTACATAAGTCTAAAAATTTTGAACCATTTTACAATTCAAGGGTAATAACGCTTAAGGTGTTTTGCGTTCTATGGATGTAGGAGCAGGTTCCCCTCCAAGTCGGTCAACATGTATGTGCCTAGGCGCACGATACCTTTGA

mRNA sequence

ATGGCTCCTGATCTCAACCTCGGACCTATCAAGTTGAGGTATTCTGAGAAGTGGGCTTCCGGGCCGAACGACACACCTGGCCCCCAGAACTTGGTGGCCAGGTACCTGAAGGGCCTTGATTCCGAGGCCAAGGAGGATGAGAAGGATGAAGAGGAACCGACACAGGAGAGTGATGTCGTCCGCACCACTCAAGGCGAGGATAGAGCTACTCCCCACCCTACACGTATGGCTCCTTCTTCTCAAGAGGCAACACTTGTTGACTCACAGGAGGTCGACCTACTAGCTTCCCAAGGAGCAGGTTCCCCTCCAAGTCGGTCAACATGTATGTGCCTAGGCGCACGATACCTTTGA

Coding sequence (CDS)

ATGGCTCCTGATCTCAACCTCGGACCTATCAAGTTGAGGTATTCTGAGAAGTGGGCTTCCGGGCCGAACGACACACCTGGCCCCCAGAACTTGGTGGCCAGGTACCTGAAGGGCCTTGATTCCGAGGCCAAGGAGGATGAGAAGGATGAAGAGGAACCGACACAGGAGAGTGATGTCGTCCGCACCACTCAAGGCGAGGATAGAGCTACTCCCCACCCTACACGTATGGCTCCTTCTTCTCAAGAGGCAACACTTGTTGACTCACAGGAGGTCGACCTACTAGCTTCCCAAGGAGCAGGTTCCCCTCCAAGTCGGTCAACATGTATGTGCCTAGGCGCACGATACCTTTGA

Protein sequence

MAPDLNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQGEDRATPHPTRMAPSSQEATLVDSQEVDLLASQGAGSPPSRSTCMCLGARYL

Homology

[Close]

BLAST of Moc04g25730 vs. NCBI nr
Match: XP_022152119.1 (uncharacterized protein LOC111019909 [Momordica charantia])

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-09
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 5   LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
           ++L  +K +YSEKWASGPN TPGPQ+LV +Y++ LDS+   D ++E+ P+QE + + TTQ
Sbjct: 228 IDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSD-YSDMEEEDAPSQEPNEIGTTQ 287

Query: 65  GEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
            E           PS Q+     SQEV+LL S+G
Sbjct: 288 EE----------VPSQQDG----SQEVNLLGSEG 306

[Close]

BLAST of Moc04g25730 vs. NCBI nr
Match: XP_022158409.1 (uncharacterized protein LOC111024898 [Momordica charantia])

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 5   LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
           ++L  IK +YSEKWASGPN TPGPQ+LV +Y++ LDS+   D ++ + P+QE + V TTQ
Sbjct: 159 IDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSD-YSDVEEGDAPSQEPNEVGTTQ 218

Query: 65  GEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
            E           PS     L  SQEV+LL SQG
Sbjct: 219 EE----------VPSQ----LGGSQEVNLLGSQG 237

[Close]

BLAST of Moc04g25730 vs. NCBI nr
Match: XP_022142326.1 (uncharacterized protein LOC111012467 [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 5.4e-08
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 4   DLNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTT 63
           +++LG +K RY+EKWASGPN T GP +LV +Y++ LDS+  + ++D E P+QE   V TT
Sbjct: 475 EVDLGDLKKRYAEKWASGPNGTSGPASLVDKYVRDLDSDYSDLDED-EVPSQEPTEVGTT 534

Query: 64  QGEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
           Q             PS Q+     SQEV+LL SQG
Sbjct: 535 Q----------EGVPSQQDG----SQEVNLLGSQG 554

[Close]

BLAST of Moc04g25730 vs. NCBI nr
Match: XP_022147182.1 (uncharacterized protein LOC111016193 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 7.9e-07
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 5   LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
           ++L  +K RYSE WASGPN TPGPQ+LV +Y++ LDS+   D ++E+ P+QE   V TTQ
Sbjct: 220 IDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSD-YSDMEEEDAPSQEPTKVGTTQ 279

Query: 65  GE 67
            E
Sbjct: 280 EE 280

[Close]

BLAST of Moc04g25730 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-06
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 5   LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
           ++L  +K +YSEKWASGPN TP PQ+LV +Y++ LDS+   D ++E+ P+QE   V TTQ
Sbjct: 466 IDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSD-YSDMEEEDAPSQEPXEVGTTQ 525

Query: 65  GE 67
            E
Sbjct: 526 EE 526

[Close]

BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match: A0A6J1DF31 (uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019909 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 5   LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
           ++L  +K +YSEKWASGPN TPGPQ+LV +Y++ LDS+   D ++E+ P+QE + + TTQ
Sbjct: 228 IDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSD-YSDMEEEDAPSQEPNEIGTTQ 287

Query: 65  GEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
            E           PS Q+     SQEV+LL S+G
Sbjct: 288 EE----------VPSQQDG----SQEVNLLGSEG 306

[Close]

BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match: A0A6J1DZB5 (uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024898 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.9e-09
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 5   LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
           ++L  IK +YSEKWASGPN TPGPQ+LV +Y++ LDS+   D ++ + P+QE + V TTQ
Sbjct: 159 IDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSD-YSDVEEGDAPSQEPNEVGTTQ 218

Query: 65  GEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
            E           PS     L  SQEV+LL SQG
Sbjct: 219 EE----------VPSQ----LGGSQEVNLLGSQG 237

[Close]

BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match: A0A6J1CLV1 (uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012467 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.6e-08
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 4   DLNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTT 63
           +++LG +K RY+EKWASGPN T GP +LV +Y++ LDS+  + ++D E P+QE   V TT
Sbjct: 475 EVDLGDLKKRYAEKWASGPNGTSGPASLVDKYVRDLDSDYSDLDED-EVPSQEPTEVGTT 534

Query: 64  QGEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
           Q             PS Q+     SQEV+LL SQG
Sbjct: 535 Q----------EGVPSQQDG----SQEVNLLGSQG 554

[Close]

BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match: A0A6J1D1N9 (uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016193 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.8e-07
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 5   LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
           ++L  +K RYSE WASGPN TPGPQ+LV +Y++ LDS+   D ++E+ P+QE   V TTQ
Sbjct: 220 IDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSD-YSDMEEEDAPSQEPTKVGTTQ 279

Query: 65  GE 67
            E
Sbjct: 280 EE 280

[Close]

BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 5   LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
           ++L  +K +YSEKWASGPN TP PQ+LV +Y++ LDS+   D ++E+ P+QE   V TTQ
Sbjct: 466 IDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSD-YSDMEEEDAPSQEPXEVGTTQ 525

Query: 65  GE 67
            E
Sbjct: 526 EE 526

The following BLAST results are available for this feature:

BLAST of Moc04g25730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152119.1	2.2e-09	45.74	uncharacterized protein LOC111019909 [Momordica charantia]	[more]
XP_022158409.1	1.4e-08	47.87	uncharacterized protein LOC111024898 [Momordica charantia]	[more]
XP_022142326.1	5.4e-08	45.26	uncharacterized protein LOC111012467 [Momordica charantia]	[more]
XP_022147182.1	7.9e-07	53.23	uncharacterized protein LOC111016193 [Momordica charantia]	[more]
XP_022159252.1	3.9e-06	51.61	uncharacterized protein LOC111025665 [Momordica charantia]	[more]

BLAST of Moc04g25730 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g25730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DF31	1.1e-09	45.74	uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DZB5	6.9e-09	47.87	uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1CLV1	2.6e-08	45.26	uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1D1N9	3.8e-07	53.23	uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DZB3	1.9e-06	51.61	uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc04g25730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g25730.1	Moc04g25730.1	mRNA