Moc04g25260 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g25260
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DUF4216 domain-containing protein
Location	chr4: 18344105 .. 18347403 (-)
RNA-Seq Expression	Moc04g25260
Synteny	Moc04g25260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACTGCCGTCACCCACACCACGCCTTTCCTCCCTCTTTCAACGCTGCCGCCGCCCTCTTTCAACGTCGACGCCACTTCTTATTTCATTGCCGCCAGTCACCACCGCCTCCATTATCCACAGCGTCCGGCGCCCCTATCGTTGCCATGCACCACCGCCATGTACCACCACCGTGAAGGAAGTAAGATTTAGAACCCAATGAATCCCCAATTGTTAGGTTTTGAATCTGATACATGCATGTGAATTGCCTATTGTTTACTTAATTTTAGCTTAATCGATCTATAATTGTTTACTTAATTTTAGCTTAATCGATCTATAATTATTTAGTTAATTTTGGCTTAATCGATCTATGAGTTTTCACTTATTTTACAAACATTAGAGAAATAAGATGTTGATTGTTGTTTGTTGAAATTCCAGTGTATATAGTACTTTTTCATGATCCAATATCTAATTCTACACATGCTTTTGTAGTGCTTGTGGTGTTTTTTTGTTACTTGTTGAAAGAATCTTTTGTTATAGTTTTTGAATAAATTTTCTTGAAGTGAAGAAATGTTTGCTATTTTAGTGTATTAGTGATTTGAAGGTTGGGTTAGAAAAAAAACAACAATAGCATGTGTAGAATTAATTTTCATTTTAGGTATTCAAAATAACTTGAAACATTGATTAGAATAATGATATTAATCATTAATAATATGTTAATTAATGTACTAAAAAAATCATTAATAATAGTTCATAATTTTTTATATAAGCTACGCCAACTAAAATTTAACAAAATAAATTATTATTAAGAAAAATATAAGCTACCAACTAAAATTTAAACACATGACATGAATACTAAGAAAAAATAAAACTAATTATTAGTGCCTTTGAAATTTAGAAGCATAAAGTTCAAAAGAAATTACGAGGCTTCATAAATCAAATTATGAGGCTAAGAAAAGATTACGTAATCGAGGGTTGTGATATGAATCAATTCACGCGTGTAAGTATGATTGTGCAGGTACAAACTTAATAAATCAAAAGAAAAAAAGATTCCTCATAAGGTGCTGAGGTATTTTCCATTGAAGACAAGGTTATAAAAATTATATCTTTCAAAACATACTGCTGAGGATATGAGGTAGCATAAAGATAAAAGGTATGAAACTAAAGGAATACTTCGACGTCCTGCTGATGCTGAGAGTTAGAAACATTTTGATAGCCAGTACCCTTCTTTTGCTGCAGATGCTCGTAATGTGAGACTGGTACTTTCTTCGGATGATTTTAACCCATTTGGAAATATGAATTTATCGTATAGTATGTGGCCAGTGATGCTCATTCCCTACAATTTGCCCCCTTGGAAGTGTAGGAAAGAATGATCCAATTTTTTTTTTTTATCTCTACTCATTCTTGGGCCAAGGTCTCCTGGTAAAAAGATTGATATTTACCTACAACATTTGATAGATGAGTTGAATGATTTGTGGGTGAATGATGTTTGCACGTATGATAGTTTCAGTGCCTCTTTATTCCAACTTCATGCTGCCTTATTGTGGACGATCAATGATTTTCCAACTTATGGTGATTTGTCTGGTTGGAGGACAAAAGGTTATAAGGCTTGTCTGGTTTGCAATGACGATACGAGTTCAATGAGATTAAAGAGCAAATTTTGTTTCATGGGGCATCGTCGATATCTACCTCAAACACATACATGGCGTAGGAGTAGGCAACATGATGGAAAACAAGAATTTAGAACAGTTCCAAAGATATTATCTAGAAATGATATTAGAAATCAATTGAATTCATTGAGTTTCCCAAAGTTGAGCAAGCATCCTACAATAGTATGTGATAACAAACGTACACAGATAATTAACAAGCACAATTGGAGTAAAAGAAGCATTTTCTTTCATTTTCCGTATTGGCAAAATCTTAAGTTACGTCATAAACTTGATGTGATGCATATTGAGAAAAACATATGTGATAATGTGGTTGGTACTATATTAAATATTGATGGGAATGCTAAAGACACCATTAAAGCCCGTGAGGATTTAGCAAATGTGAAGAAAGGAACTTCACATACAATAAATTGGAGGCAGGTGTGTGAAGCCCTATGCATTGTTCACGTTAACTGCAAATGAAAAAGTTAGTTTTTGTACATTCTTAAAATCCGTGAAGTTTCCAGATGGATTTGCTTCAAATATATCTCGATGTGTCAATGCAAATGAGGGTAAGATCACATGTCTGAAAAGTCATGATTGTCACGTTTTATTGCAAAGACTTCTTCCAATTGGTATTTGACCATATAATCAAAGACATGTTTACAACTATATCAGAATTGTCAAACTTCTTTTATGATTTATGTGCAAAAACTCTACACATATCAGATTTAGACAAGAATGCAAACGATATAATGTTCATCTTATGTAAGTTGGAAAAAATCTTTCCATCGACATTTTTTTACGTTTTGTTCACTTAGCGGTCCATTTGCCGTGGGAAGCAAAGATTGTTGGTCCATTTGGTTATAGTTGGATGTATCCCATTGAAAGGTATGAAAGTTTGCCCTTATGAGTTGAATCAAATGTTTTCCATTGTGGATTTTAAGTTCTAAGTCCGTCACTATTTTTTGTATTAGAGCTTGCGATATTTGAAGCAATATGTTAGAAACAAAGCTCGGTTTGAAGGTTCAATTGCAGAAGCCTACATCATAAATGAATCTTTGACATTTTGTTTTATGTATTTAAATAGAATTGAAACAATATTTAATAGAAGTGAGTGTAATTATGATAACATCGAGGATATATAGAACAATGATGGGCTATCGGTTTTTTCTGGACGTGTACGATTTTTGGGTGGTAGCCAATTTCAACGCTTGACTTCTGATGAGCTGGAAAAAGCACACTGGTATATACTAAACAATTATGATGAAGTGGAACCTTACCTTCAGTATGTATCTCTTCCATGTATAACTCGTATATTAGAATTTGTTACTATGATAAAGTTAAGATATATTTCATGCTTCGGGAGCATATGCGTCTTCTTCAATCAAACATACATGGTGATTTGTACAAGAGACAACAATTAAAGTTTCCTACTTGGTTAAAAAAAAAGGTAGCCTGATACTTGTAGTTATACAACTCTATTTTTTTTCTTTAGATATTGCAACTATAAATTGGTTTCTTTGATTAGGCTCAAATCTTGTATCGTGAAAAAGGGATTTCCGATGAGTTGTATGTCTTGGCCTTGGGCCCGAACAACTGTGTTCAATCTTATAGTGAATGTATAGCCAATGAAATTCGATTTCATTCAAAAGAGCGTGATAGTCGTTGA

mRNA sequence

ATGCCACTGCCGTCACCCACACCACGCCTTTCCTCCCTCTTTCAACGCTGCCGCCGCCCTCTTTCAACGTCGACGCCACTTCTTATTTCATTGCCGCCAGTCACCACCGCCTCCATTATCCACAGCGTCCGGCGCCCCTATCGTTGCCATGCACCACCGCCATGTACCACCACCGTGAAGGAAGCTCAAATCTTGTATCGTGAAAAAGGGATTTCCGATGAGTTGTATGTCTTGGCCTTGGGCCCGAACAACTGTGTTCAATCTTATAGTGAATGTATAGCCAATGAAATTCGATTTCATTCAAAAGAGCGTGATAGTCGTTGA

Coding sequence (CDS)

ATGCCACTGCCGTCACCCACACCACGCCTTTCCTCCCTCTTTCAACGCTGCCGCCGCCCTCTTTCAACGTCGACGCCACTTCTTATTTCATTGCCGCCAGTCACCACCGCCTCCATTATCCACAGCGTCCGGCGCCCCTATCGTTGCCATGCACCACCGCCATGTACCACCACCGTGAAGGAAGCTCAAATCTTGTATCGTGAAAAAGGGATTTCCGATGAGTTGTATGTCTTGGCCTTGGGCCCGAACAACTGTGTTCAATCTTATAGTGAATGTATAGCCAATGAAATTCGATTTCATTCAAAAGAGCGTGATAGTCGTTGA

Protein sequence

MPLPSPTPRLSSLFQRCRRPLSTSTPLLISLPPVTTASIIHSVRRPYRCHAPPPCTTTVKEAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR

Homology

[Close]

BLAST of Moc04g25260 vs. NCBI nr
Match: XP_016903647.1 (PREDICTED: uncharacterized protein LOC103504159 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-08
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY LA GPN+C +SYS CIAN +RFH+K+RDSR
Sbjct: 383 KAQRLHCDKFISDDLYALACGPNDCARSYSGCIANGVRFHTKDRDSR 429

[Close]

BLAST of Moc04g25260 vs. NCBI nr
Match: KAA0067295.1 (Transposon, En/Spm-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-08
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY LA GPN+C +SYS CIAN +RFH+K+RDSR
Sbjct: 672 KAQRLHCDKFISDDLYALACGPNDCARSYSGCIANGVRFHTKDRDSR 718

[Close]

BLAST of Moc04g25260 vs. NCBI nr
Match: TYK22071.1 (uncharacterized protein E5676_scaffold318G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-08
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY LA GPN+C +SYS CIAN +RFH+K+RDSR
Sbjct: 102 KAQRLHCDKFISDDLYALACGPNDCARSYSGCIANGVRFHTKDRDSR 148

[Close]

BLAST of Moc04g25260 vs. NCBI nr
Match: KAA0060321.1 (uncharacterized protein E6C27_scaffold22G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 8.6e-08
Identity = 29/47 (61.70%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY +A GPN+C +SYS CIAN +RFH+K+RDSR
Sbjct: 96  KAQRLHCDKFISDDLYAIACGPNDCARSYSGCIANGVRFHTKDRDSR 142

[Close]

BLAST of Moc04g25260 vs. NCBI nr
Match: KAA0036187.1 (uncharacterized protein E6C27_scaffold69G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY LA GPN+C +SYS CIAN +RFH+K+ DSR
Sbjct: 578 KAQRLHCDKFISDDLYALACGPNDCARSYSGCIANGVRFHTKDHDSR 624

[Close]

BLAST of Moc04g25260 vs. ExPASy TrEMBL
Match: A0A5D3DEG0 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00540 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-08
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY LA GPN+C +SYS CIAN +RFH+K+RDSR
Sbjct: 102 KAQRLHCDKFISDDLYALACGPNDCARSYSGCIANGVRFHTKDRDSR 148

[Close]

BLAST of Moc04g25260 vs. ExPASy TrEMBL
Match: A0A5A7VNJ9 (Transposon, En/Spm-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G001220 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-08
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY LA GPN+C +SYS CIAN +RFH+K+RDSR
Sbjct: 672 KAQRLHCDKFISDDLYALACGPNDCARSYSGCIANGVRFHTKDRDSR 718

[Close]

BLAST of Moc04g25260 vs. ExPASy TrEMBL
Match: A0A1S4E603 (uncharacterized protein LOC103504159 OS=Cucumis melo OX=3656 GN=LOC103504159 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-08
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY LA GPN+C +SYS CIAN +RFH+K+RDSR
Sbjct: 383 KAQRLHCDKFISDDLYALACGPNDCARSYSGCIANGVRFHTKDRDSR 429

[Close]

BLAST of Moc04g25260 vs. ExPASy TrEMBL
Match: A0A5A7V3H7 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001050 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.1e-08
Identity = 29/47 (61.70%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY +A GPN+C +SYS CIAN +RFH+K+RDSR
Sbjct: 96  KAQRLHCDKFISDDLYAIACGPNDCARSYSGCIANGVRFHTKDRDSR 142

[Close]

BLAST of Moc04g25260 vs. ExPASy TrEMBL
Match: A0A5A7T3L6 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00560 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 9.2e-08
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 61  EAQILYREKGISDELYVLALGPNNCVQSYSECIANEIRFHSKERDSR 108
           +AQ L+ +K ISD+LY LA GPN+C +SYS CIAN +RFH+K+ DSR
Sbjct: 578 KAQRLHCDKFISDDLYALACGPNDCARSYSGCIANGVRFHTKDHDSR 624

The following BLAST results are available for this feature:

BLAST of Moc04g25260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903647.1	5.0e-08	63.83	PREDICTED: uncharacterized protein LOC103504159 [Cucumis melo]	[more]
KAA0067295.1	5.0e-08	63.83	Transposon, En/Spm-like protein [Cucumis melo var. makuwa]	[more]
TYK22071.1	5.0e-08	63.83	uncharacterized protein E5676_scaffold318G00540 [Cucumis melo var. makuwa]	[more]
KAA0060321.1	8.6e-08	61.70	uncharacterized protein E6C27_scaffold22G001050 [Cucumis melo var. makuwa]	[more]
KAA0036187.1	1.9e-07	61.70	uncharacterized protein E6C27_scaffold69G00560 [Cucumis melo var. makuwa]	[more]

BLAST of Moc04g25260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g25260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DEG0	2.4e-08	63.83	DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7VNJ9	2.4e-08	63.83	Transposon, En/Spm-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S4E603	2.4e-08	63.83	uncharacterized protein LOC103504159 OS=Cucumis melo OX=3656 GN=LOC103504159 PE=...	[more]
A0A5A7V3H7	4.1e-08	61.70	DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7T3L6	9.2e-08	61.70	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Moc04g25260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g25260.1	Moc04g25260.1	mRNA