Moc04g25190 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g25190
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr4: 18289427 .. 18293492 (-)
RNA-Seq Expression	Moc04g25190
Synteny	Moc04g25190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCCAACTGCGCCCAGTCAAGTCCATCCCTTGCGCGCGCTGATGGCGGCAATGGTAAGGCAAGCTCAACCTACTGTCCTTTACGGTCGAGCAGACTTCACTAAGTCGGTATATCTCTTGGTTGTTCAACATGTGGCTGCCCGTTTCCGCCTCATAACATTGTCATACATCAAATGCATGAGTTAGCTAGCATAGATTATAACTTTTTTTCTCACCAAAAGAAAAAGAAGAAAAAAATGGATGATGAATGATGCATGTGGTTTGAAGGAGTGGACCTACTTCATTAAATGCGCCATGGCTGCCCAACATCAGTACATAAACTCCACCTTTACTTCTTCCAGTTTCTTTAAATTTTGTCTGTTCTGATGTCTGAATGCATCTCATAGAGATCGATGAAGCATTTAATACCAAACCCAACACGCAAAGATCTTCTTTTTCTTTGCTTTTCAAATTTTCCATATTTTTTATTTAACAATTAATAAGCCATGGGCATCAATGATTGTCTATCTAAGAGTTCAGAAGGGGGAAGTTTTGATTGGCAAAAGAAAAATATAGAGTATGGAGAAAAAAGAAAAAAAATGGTGTATCATAATATATAGCCTCGGTAGGGTTGTTTAGATGTGGACTGACCAATGAAAATATTTGTTTGTATAAACCGAAATTCAAGATGAAAACGACTCCTCAATTCAGCTAAATCAATGTGGTTGATTGTGAAGATCTTTGCACTCCAAAACCCTCTTTCTTTTTCAAGCTTCCTCACTTCTCCTGCTCATTTATTTCACATCTTTTTCAACCCAATTTTTCTCTCTCTTTTCTTCAGCCCTCATGGAGCTGAGCTAGCTTTGTCTATTTTTAACTTTTTGGGTTAAAAAAGAAATGAAAACACGTGGCCGAATGGACGAATAGATAGAATGTGTGGGAAGGTACATGATTATTTTCGACCGTTGTTTTGTCTAGATTCTAAAAAGATGTCCTTTTTGTGATTTGAAATAATAATATATATATGTATCTACGTAGCCAAAATGAATTATGAGATGAAAAATTGAAACTGTGGTCTGAAATGTGCAGTCTGATGGTTCTGTTTCTGAATGTTATTTGTTTATATGGAAAAATATGATTGAAGGGGGTGGTTTTGATACATGCATGAGAGAGAGAGAGAGAGAGAGAGGATAATGAATGGATTTTGTAGGAAAAATACAAAGTTGGTGCGTTGGAGAGGGAGAGGGAGAGGGAGTAAATTTTGTTTTGTGAGTAGGAATGATAAGTTAACATGTAACCTGGTTTGGGGGTCTCACAGGAGGGTGCAGGGCAATAGGGGTCTGTGAGAGTCCCATTACTATCACTGCTGTGCCCTACATCCTAAGGACACCCCCTCCTCTCTGGTCAGATCAGAAAAGCCCATAGTGCATGTGGGTCGGTGTGTGTTTGGGAAACCAAACAAGAATGTTTTGCTTTGCTTTGCTTTGTCTGTCTGTGACTTGTCAAAATTCTATGTGGCCTACCTTTTTCCCTTCTGCTTTTCTTTTCTTCCTTCTTTTAATCTATTTGGTTTGGTGTGATGTGAGCTACCTTTTTAATTTGTTTTCATCTCATTTTTGCATTTTGTTTGAGTTCTTTCAAAACCCCTTTAAATTTTCCTTTTTTTTCCCTCTACTTTCTAGGAAAGATATTCTTAAAAGTGTGTTTGAATAATAATTTTTCTATCTAATAAGGGTTTTTTCTTTTTTCTATCTATTCATTTTCTGATGGATTCGGTCCTGGAGTTTTGGAGCTGAATTTATTTAGAAAACTCTCATAAGTCTTTTTGAGCTTTTTAATTTTCTGTCTAATAAGTCTTTATCGTTGACTTTATAAATAACTTAATGTTATCACTGAATGTCTGAAATCAACCTACCATGGAATCTTTAAATAATACAATCATGGTCCACGCAATTGCTAAACTGACAAAGTTAATGATGATATGGACTTATGAGACACAAAGTTGAAAATTTAAAGAGGTATTAGAATTAGAATTTTTTTAAAGTATAGGGACCAAATAGACAATCTTGAAAGTTTAAGGACACTTATTGAAGATAAATTAAGATACAAAAACTGGATAGGTAATAACCCTAAACGTTCAAGGATCAAATCTATAAATTAGTTCTCGTTTGATAACCATTTTTATTTTTTATTTTTATTTTCCAGTTTCGAAAAAATAAAAAACATATCTATTTGATAACTATATTTTTTTTCAAAGAAAGTTCGAGAGTTAAAATAGATATGTTAGAGAGAAAAAATACATAGAAATAAAAAAATAAAAGTTAGAGAAAATCATTTAGAGATCATTTGCTTGGTAGGAATCCAATATTCTGATAAGATGGATATCCAAATTCCGATGTTTTGTTGGACAAAAATGAAAGATGTCTAAGCATCTCATGAGGATTAGGCAAATGCCCAAGTAGCTTTTGAATACCCTCCTACAACATGAGCTTGCATGTTCTTAATTATGACATTTTTGGTAACATATACTTTCTTTCATCGATCTTCTTTATTTGTATTTTTTTACCTCATATTTCGTTATTTATTTTTAAAATAAATCAATGCGCATTTATTCATTGGTAAATGAATATAACCATTAACTATATTTTTATACAGCATTTTGATATCAATTAAATGTTAGTCAATACCAAAACGAGCATAGCTCAGCGGTAATTGGCATATACCTCCAACCAAAACTAAATGTTAGTCAATGATATAATCTCTTTTAACTTATTTTTAATTAAAATCTAATGTGCCATCTTTCTTTTATTTTAACAGTGACCCTAACATAAAATAAATTGAAATAAAAATATAATATAAAAAAACAAATTTGTTAGATAAATTTAAATTATATATTAAAAAACAACATATAAATTAATAATGACTATGATAAGAGCATTGTTTGTAACAATACATAATTTTAGTTACATTTTTACAAATCCTGTAAAACAAACACAACTATCCAAATATTATCAAACGTCCTTATAAATATTTCTATCCAACAAATATGGTTATCCAAAGATATGTCAGACATCTCTATAATTTCAAATATCTAATATTTCAGGTATCTGAATATGTTAGCTATCTAGATTCCAAAAAATAAATGGTTGCTTAGGGGGAGGAAGTTAGAGAGCAAAAGTTATGTTAGTGAGACAATATTAATTAGAAAAATAAATGTTATAGAGACGGTCAAAGAGAAGATAATTAAGATTGTACAACTTTTTTTTTCTTCTCTCGAAAGACTGAGTTTTTTCAAAGGACAGCAAAAAAAAGTGGGGAGGGGGTGGTCAGTGGCCTACTCTCCACCTCTCCTTCTCCTCCCCATCAAGGGTGTGCGTTTTCTCTCGGTCCTCTAGCTGAGTTTTTTTTCAGAGGGTTTTCCTTTCTCCTTTGTTTAAGTTCTTTTGTACTTTTTTTTCCTTGAGTAGTAAGTAGCATAGATCAAAATATTTCGGGGACTTCTATTGCTGTTTTTAGGGAGGATCTTTCTTTCCCGCTAGTTTCTGTGATGCCGGATGGTGGTAGGGAGTCAGGGATCTCCCTATTGGATGCCAATAGTGCTGTTGTAGCTGACAAAATCAAAACCAACATTGTTATGTATGGTCAATGATTCGTCATCGTGACGTTTTGAATGCAAAAAATTGGAGAGGGCTACCACCTGTAATCTCTTGGGATGACTCTTCATCTTCGTTACATTCCAATTTAGAGAACTTCCATGGTTCCGGGGCAAGGATGACGGAGCAGAAGATGGGCGACGATGGAGGTGCGGCAGCGATCGACTCAAACACCGTTTTAGGATCTGTGGAGGTTATCAGTCTCAATTCTCTTGAGATCCCCTATCACCATGATTTTGGGAATTTGTCTAATCCTTCCTTACCTATCATGGTGGAGTATAAGCCAACCTTGGAAACAATTATTTCCCTCCAAATCCTTGCCATAATTGACAATATCCTTCAATTAATTGAAGAATCTTTCCCAAAATCATTAAATGAGGTTGTGGAAGTTTTGATATCATTAAATGAGATTGTGATCTTTAAACTTTAA

mRNA sequence

ATGGGTGCCAACTGCGCCCAGTCAAGTCCATCCCTTGCGCGCGCTGATGGCGGCAATGGAGGGTGCAGGGCAATAGGGGTCTGTGAGAGTCCCATTACTATCACTGCTGTGCCCTACATCCTAAGGACACCCCCTCCTCTCTGGGAGGATCTTTCTTTCCCGCTAGTTTCTGTGATGCCGGATGGTGGTAGGGAGTCAGGGATCTCCCTATTGGATGCCAATAGTGCTGTTGTAGCTGACAAAATCAAAACCAACATTGTTATGTATGAGAACTTCCATGGTTCCGGGGCAAGGATGACGGAGCAGAAGATGGGCGACGATGGAGGTGCGGCAGCGATCGACTCAAACACCGTTTTAGGATCTGTGGAGGTTATCAGTCTCAATTCTCTTGAGATCCCCTATCACCATGATTTTGGGAATTTGTCTAATCCTTCCTTACCTATCATGGTGGAGTATAAGCCAACCTTGGAAACAATTATTTCCCTCCAAATCCTTGCCATAATTGACAATATCCTTCAATTAATTGAAGAATCTTTCCCAAAATCATTAAATGAGGTTGTGGAAGTTTTGATATCATTAAATGAGATTGTGATCTTTAAACTTTAA

Coding sequence (CDS)

ATGGGTGCCAACTGCGCCCAGTCAAGTCCATCCCTTGCGCGCGCTGATGGCGGCAATGGAGGGTGCAGGGCAATAGGGGTCTGTGAGAGTCCCATTACTATCACTGCTGTGCCCTACATCCTAAGGACACCCCCTCCTCTCTGGGAGGATCTTTCTTTCCCGCTAGTTTCTGTGATGCCGGATGGTGGTAGGGAGTCAGGGATCTCCCTATTGGATGCCAATAGTGCTGTTGTAGCTGACAAAATCAAAACCAACATTGTTATGTATGAGAACTTCCATGGTTCCGGGGCAAGGATGACGGAGCAGAAGATGGGCGACGATGGAGGTGCGGCAGCGATCGACTCAAACACCGTTTTAGGATCTGTGGAGGTTATCAGTCTCAATTCTCTTGAGATCCCCTATCACCATGATTTTGGGAATTTGTCTAATCCTTCCTTACCTATCATGGTGGAGTATAAGCCAACCTTGGAAACAATTATTTCCCTCCAAATCCTTGCCATAATTGACAATATCCTTCAATTAATTGAAGAATCTTTCCCAAAATCATTAAATGAGGTTGTGGAAGTTTTGATATCATTAAATGAGATTGTGATCTTTAAACTTTAA

Protein sequence

MGANCAQSSPSLARADGGNGGCRAIGVCESPITITAVPYILRTPPPLWEDLSFPLVSVMPDGGRESGISLLDANSAVVADKIKTNIVMYENFHGSGARMTEQKMGDDGGAAAIDSNTVLGSVEVISLNSLEIPYHHDFGNLSNPSLPIMVEYKPTLETIISLQILAIIDNILQLIEESFPKSLNEVVEVLISLNEIVIFKL

Homology

[Close]

BLAST of Moc04g25190 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-25
Identity = 73/114 (64.04%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 59  MPDGGRESGISLLDANSAVVADKIKTNIVMYENFH-----------GSGARMTEQKMGDD 118
           M D    S IS LDANSAVV DKIK NIVMY  +H            +  RM EQK+GDD
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 119 GGAAAIDSNTVLGSVEVISLNSLEIPYHHDFGNLSNPSLPIMVEYKPTLETIIS 162
           GGAA I SNTVLGSVEVI+LN LEIP  HDFGNLSNPSLP+ VE K T +TIIS
Sbjct: 61  GGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTIIS 114

[Close]

BLAST of Moc04g25190 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 6.3e-26
Identity = 73/114 (64.04%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 59  MPDGGRESGISLLDANSAVVADKIKTNIVMYENFH-----------GSGARMTEQKMGDD 118
           M D    S IS LDANSAVV DKIK NIVMY  +H            +  RM EQK+GDD
Sbjct: 1   MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDD 60

Query: 119 GGAAAIDSNTVLGSVEVISLNSLEIPYHHDFGNLSNPSLPIMVEYKPTLETIIS 162
           GGAA I SNTVLGSVEVI+LN LEIP  HDFGNLSNPSLP+ VE K T +TIIS
Sbjct: 61  GGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTIIS 114

The following BLAST results are available for this feature:

BLAST of Moc04g25190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159860.1	1.3e-25	64.04	uncharacterized protein LOC111026150 [Momordica charantia]	[more]

BLAST of Moc04g25190 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g25190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZZ2	6.3e-26	64.04	uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of Moc04g25190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g25190.1	Moc04g25190.1	mRNA