Moc04g25010 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g25010
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr4: 18166017 .. 18172594 (-)
RNA-Seq Expression	Moc04g25010
Synteny	Moc04g25010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGGGCCGTGGGCCGAGCAAGGGTCGGGACTGAGAAGTGGTCGGGACCGAGAAGGGGTCGGGACCGAGCAGGGGTCGGGATCGAGCCTTCTCGGCCCGGTTAGTTCTCCGTCGGTCGCTTTCCTTGTTCTCTGCCCCGGCGCTAGGTCGTTCTTTGGGCCGGCCCGTTAAGTCATGGGCTAGTCTCCCCCAATCGATGATCTCAAGCTTCAACTCCTTGTCCCGTTTCGGGTCGTTTTTGTTCTCCATAACAATGGCCCTCACTCTCAAAACAAAAGACGAATAATTGTGTAAAGATCTTTGTTTTGAGAGTACTTGTCGCTTGTCGTTACCATGAGATCATTGTATATCAGTGGCTAAAAATTTGAAGGTTGCTAACGCACAGGGCTTCTACCAAAAGGTTTCGATCCAATTTTGGATTTTAGTGCTTGGTTCCTGCCACTGATTTTGTGCCTTGAACTTGTCAATACTATTTATGAATCGGAAGTTTTTCCAATTTTCGTTGACCACAATCAAGTCTCCTGAGCCTGGTTTTATTCTCATCTGAGTTTAAACCATTTACTTTTGGCCTTGAGATCTAACTTTAACAGAACTAATGTCGATACCTTTGGGTTTCTAACCTATTTGGCTTTTGCCCATGTTTTATACCTCAGGATTTACTCTCGGGTTTCTAACCCACTTGGCTTTTGCCAATGGCTTTTATACTCTGAGTTTAGTCGGCATCCTTAGGTTTCTAACATATTTGGCTTCTGCCGGTTTTTTACCCCAAGTTAAATCAACACCCTCAGGTTTTTAACCTATTTTGGCTTTTGCCATATGATTTTCTACCCGTGGGTTTCGTTGATCGGTTAGGCTTGCCTATTTTCTGTTTTAACCTTGCTGGGCATGTACGCATGCCTTTTCAGCACCTCGGGATTCTTTTCCCTGGTTTCACTGATTGACTTTTTGCTTATCAGCCTGCTTCTAGGTCCGTCCCAATTTTGAGTTTCTTGATTGGTCGTAGATATGTAGATATTCAGGTCGTAGATATGTAGATATTCATATGATGCCCCCTACTTGAGAAATTTATTTCAGAATGAACATAAAAACTCAAGTATCACGTCGAATGTCGAATACTTTATTAGTAAGAAGATCGTCCTGTCGAAGATTTAGTTACAATAACCTTAGTTGGTCCAAATAATGGAAAAACATAAAAATGTCCAGAAATATGTCAAACTAGTGGTAGTATCTTTTGAGGTGTTGGGCGTGCCATGGGTGTAGTAAGGTCTTCCCCCGTTGGTCTTCTAAAGCATAAGTGCCTATTCGTACCACTTTAGTGACTTTGTATGGGCCCTCTCATGTTGGCCCGAATGCACCGTTAGTTGAATCTTTAGTATTAGGCATAATATTTCTTAACACCAGATCACCTTCTTTAAAGTCACGTTTCTTAACCTTCGAGTTCTAGTATCGAGCTATTTGATTTTTGTATTCAGCCGTTCGTAGCCGTGTTGTTTCTCGATGTTCTTCTAATAGGTCGAGGTTGAGCTTTACGGATTCGTTGTTGTCAAGTAGACTGAACTGCTCTACCCTTGGGGAGGGGAGTTCAATTTCGACTGGTACTACCGCTTCAGAGCCAAATGATAATGAAAATGGTGTTTCTCCTGTCGAAGTACAAGGTGTTGTTCTGTAGGCCCATAATGCGTTGGGAAGTTCCTCTGCCCACAACCCTTTGAGCTTTTCTAATCTGGTATTTAGAGTTCTTTTGATGATTTTTTTGACTGCTTTAACTTGCCCATTAGCCTGCGGATGTGCTGGCGAGGAACAGATGTGCTTAATGCCCAACTCCTTGCAAAATTCTCGAAAGGCAGCATTGTCGAACTGCTTCTCATTATCACTGATAATGGTGTAGGGTATTCCGAAGCGGCAAATTATGTTCTTCCAGATGAAGTCGGTGACTTTTTTCTCAGTAATTATAGCTAGGGCTTTGGCTTCGGCCCATTTAGTAAAATAGTCGACTGCCACTACTGCAAATTTGGTCTGGCCCTTTCCTAGTGGGAGAGGCCCTATAAGGTCTATTCCCCACTGAGCAAAGGGCCAAGGACTCATTATGCTTGTTAGAGGCTTTGGCGGTTGTCTAGGTACTGTTGCAAACCGTTGGCCTTTGTCGCATTTTTTGGTGAATTGCTTCGTGTCATTCAGCATGGTCAGTCAATAGTACCCTTGTCGAACTATTTTGTGACTTAGGGATCGTGCTCCATAATGGCTCCCACAAACACCCTCATGTATCTCTCTCATGACGTAGTCGGCTTCATCAGGCGTTAGACATTTTAAAAGCGGCAACGAGTAGCCTCTTTTGTACAGATTGTCGTCTTTAAGCACATATCTGGCTGCTCGTCGTTGTAGCTGCTGGGCCTCTATCTTTTCAGTAGGCAGGATCCCGTCTCTCAAATATTTGATCAAAGGGCCCTTCCAGTTTTCTTCTGGTTGCCCTTACTCGTTGATATCCATGACTTCCTGAGCTTCTATGCTTGGCTCAGGTAGAATATCGACCGGTACAGTTCTGCCTAGGTCGATTTCATAAGTTGCAGCTAGTCGAGCTAACGCATCAGCGTTGACGTTTTGAGCACGTGGAATTTGTCGAATCTCATATTTTGAGAACTAATCGAGCTGGTTTCTTACCTGTGAAAGGTATTTCGCCATTCGCGGTTCTCTAGCTTGGAACTCCTCTTTCACCTGACCTACAATCAGCTGTGAATCACTGAGTATCAGTATGTTCCTGACCCCAACGTATCTGGCCACTTTTAGTCCTGCTAGTAGAGCTTCATACTCGGCTTCGTCGTTCGATGCATGAAAGCTGAATCACAGCGCATATTTGAATCTTTCTTTATCTGGAGAGATTAGTAGGAGTCCTGCCCCGCATCCTCGAAAATTTGAGGACCTATCTACGTAGAGTGTCCAGAGAGTCTCTTCCCCAACCACTTGTGGGTCGATACTATATACTTGAGGTTCTGTTGGTGTTAATTCCGCTATGAAGTTTGCCCAGCCTGCCCTTTCATGGCAGTTCTTGGCTTATAGTGAATGTCGTATTCGCTGAGCTCTACAGCCCACTTTACCAGTCGCCCAGAAGTGTCTGGCTTTTGCAAGATCTGCCTAAGGGAAAGTTGGTGAGGACAATTATTCTGTGAGCTTGGAAATACGGGCGTAGTCTCCGAGCTGAAGTGACCAATGCCAATGCCAGCTTCTCCATTTGTGGGTATCTAAGCTCTGCATCTACCATTGCTTTGCTTGTGTAGTAGATTGGAGACTGTCGTCCATCTTCTTCCTTTATTAACGCGGAACTCACTGCAGTGTTGGATACAGCTAAGTATAAGTAGAGTTCATCACCCACGATCGGCTTTGAGAGGAGTGGAGCTGCCCCCAAGTACTGTTTCAGCTCCTTAAAGGCAGCCTCACACTCTTCCGTCCATTCAAATTGCCTTTTCTTCCTTAAGATTTTGAAGAATGGCAGGCACTTGTCAGTTGAACGGCTAATGAATCTGTTGAGTGCTGCTATCCTTCCATTGAGTCCCTACAGCTGCTTTAGAGTTTTAGGTGGATCTATCTCCAGAACAGCTTTGATCTTATCTGGATTGGCTTCGATTCCCCTTTGGTGTACTAAAAATCCCAGGAACTTGCCTAAGGTCACTCCAAACGTGCAATTGGTGGGATTCAGCTTCATCTTGTACTTTCGCAAAATGTTGAATGCTTCTGCCAAATCATCCTCGCGTCGCTCGTTCTTTCGACTCTTTACCAGCATGTCGTCTACATAGACTTCCATATTTTTGCCGATTAAGGCTGCAAACATCCGATTCACCATTTGTTGGTAGGTTGCACCTGCATTCTTCAATCCGAACGACATCACGGTATAGCAATACAAGCCTCGACTCGTGACAAAAAAGGTTTTCTCCTGATTCGGTACATGCATCTCGATTTGATTATATTCAGAGTAGGCATCCATGAAACTCAATCTTTCATGTCCTGCAGTGGCATCAACCAGTTGATCTATTCGAGGCAAAGGAAAATAATCCTTTGGACAGGTCTTATTTAGGTCTGTGAAGTCGATGCACATTCTCAATTTGTCATTTGGCTTCTTTACCAGCACTACGTTGGATATCCACTGGGGATAATGTACTCCCCGAATGAAGCCTGTTTTCAGTAGCTCCTCCACCTGTTCAACTACAATCTCATTCCTTTCTTGGTTGAACACGCGACGCTTCTGTTTTACTGGCTTACAGCTCTCGTCAACGTTGAGTCGATGTACCATAACTCCTCGATCGATTCCCGACATGTCCTCCGGTGACCATGCGAACACATCGGCGTTGCTTCTGAGGAAGTTTATAAGGCTTTCTCTTTCCTCATTCCCAAACTTGGTTCCGATGTTGACCCATCGATCTTCTGCTGTCAGAGGGACAAATTCGACCTCCTCAGTCGGTTCTCCCCTTTCAAGGGTGGTCGAATTAAGTCGATGACCAAGGCTCGGCCTTGCCTCTCCCGAGAGGTCTGTCGCTTTATTCAGGACAGACGCTGGTTCTCCCCTGTCAAGGGTGGTCGGATTAAGTTGATGATCAGGGCTCGGTCTTGCCTTATCTGAGTGATCGGCCGCTTCTTTCAGGCTCTTCTTTTCGAAGCACCGATGGCTCTCATCAAGATTCATGTCGCTTTTGGACCAAGTCGACGATCAAGGCTCGGTCCTACCTTGCCTGAATGGTCGGCCGCTGCACTCTACATGCCTCGGTCAAAATTTCACCTCAGATCGGGATTTCGCTTCGATGAAGCTCGCTTTACTTTATCATCCCCACAGACGACGACAATTGTTGATGCGTGGATTTTGACCCTCCGTCTCTTCTTCTCGCACACACCAAACTCGATGATAAGGGAATCGATACCTGCAAAATCAAACCGATTTAAACCGGTGTGACCTTAGTCACACGGGCTCCGATGCTTAAGTTAGCGAGGGAGAGTTGAGAAAATAATTACCTAAGGATTAATCACCTGCCTCTTCAGGGTTGGATCTCACTGCTACTTATAGCTGTAAAGATGATTCCAAAACCTCCGTAGTCAAACCCTAATTCAGCGTTGGAGGGCCCGAGGGATCGTAGATCGTAGGCGAGAGATTCATGGGTTGGGTCATGGGCCGAGCAGGGGTCGGGACCGAGAAGTGGTCGGGACCGAGAAGTGGTCGGGACCAAGAAGGGGTCGGGACCGAGCCCTCTCGGCCCGGTTAGTTCTCCGCCGGTCGCTTTCCTCGTTCTCTGCCCCGGCGCTAGGTCGTTCTTTGAGCCGGCCCGTTACGTCATGGACCGATCTCCCCCAATCGATGATCTCAGGCTTCAACTCCTTGTCCCGTTTTGGGTCATTTTTGTTCTCCATAACATCTTCTGTTAGGATTTGAGATAGATTTTATCCCTAACAAAACTGGTATCAGAGCCTCGGCAGCAAGTTTTGTCACTCAACAATAGCAAGAAACGTAAAATGGCATTTGCAAGATTTGAAATTGAAAAGTAGGACGGAAAGGGTGATTTCAAGCTAAGGAAAGCCAAGATCAAGACAGTTCTTGGACAATAGAAGGCATCAAAAGCCATTCTTGATCCAGAAAAATTACCACAGTCGATGAACAAGGAAGAGAAAGAAATCATGGAGGAAATTGCATACGGAACAATCATTATGAACCTGAGTGATAGTGTTCTGCAGCAGCTAATTGATCTAAAAACTGCGTATGAGATATGTAATAAGATAGACACCATTTTTCTTGTAAAAGATCTTCCAGACAAAGCCTATCTAAGAGACAGGTTCTTTACCTACAAGATGGACTACTCTAAACCACTGTGTGAGAATGTTATGGATGAGATTTTCTACAATTCAAATTTCCTTTATTTAAGGAATTCAAAAGGGGAGATATCTTGATGACCTTATGATTCAGGAGAAGATATCTTACATAAGGAGGAAATATCCTGATTGCCTCAAGATTCTCCAAAGATTCAGATAACCAGATTTTCTAGATGTATCAGGATTCAAATTCAACAATTCCTAGAAGGATCAGGATTCAACTCCTATAAATAGGGAAGTAATCCAAATCCTAAGATATGCTCACAACACCCTACACTTTATACTCAACCACTCTGATTCTGACTTAAGTATCAGAGCCTGTGTGGCAAGAGCCACACCGGTCTTCAGTGCTATTATGTTTTGCAGGTCTTGTCGATCCCTTTTATTCTTGAAGATTAGTGCAAATTTGGCGGAATTCGAGGAGACCAAATTTCTGCATCAATAATTGGCACCGTTTGTGGGGACGACTAGAGATTGCAGATTTGTCAACATGAGTTCGGGAAGAAGTCCACAACATTCTGATGAAGAGTGCCGCCACATGAGGAAAGTTGATAGGGGCACACCTCCGCCCGAGGCAGTCGAAAGAGAGATTGACCGACCAGTTCTCAGAGATACCGACCGACTAGATGATGGACAGAAGGCTACTAGTCGACCAGTTCTCGGACAGAAAGACAAACCGGTCGAAGGTCCGGATCAACAAGGTGACAAGATGGCCGCCTTAGAAGAGTAG

mRNA sequence

ATGGGTTGGGCCGTGGGCCGAGCAAGGGTCGGGACTGAGAAGTGGTCGGGACCGAGAAGGGGTCGGGACCGAGCAGGGGTCGGGATCGAGCCTTCTCGGCCCGGATTTACTCTCGGGTTTCTAACCCACTTGGCTTTTGCCAATGGCTTTTATACTCTGAGTTTAGTCGGCATCCTTAGGTCCGTCCCAATTTTGAGTTTCTTGATTGGTCGTAGATATGTAGATATTCAGAGGGACAAATTCGACCTCCTCAGTCGGTTCTCCCCTTTCAAGGGTGGTCGAATTAAGTCGATGACCAAGGCTCGGCCTTGCCTCTCCCGAGAGGCTCTTCTTTTCGAAGCACCGATGGCTCTCATCAAGATTCATGTCGCTTTTGGACCAAGTCGACGATCAAGGCTCGGTCCTACCTTGCCTGAATGGTCGGCCGCTGCACTCTACATGCCTCGGTCAAAATTTCACCTCAGATCGGGATTTCGCTTCGATGAAGCTCGCTTTACTTTATCATCCCCACAGACGACGACAATTGTTGATGCGTGGATTTTGACCCTCCGTCTCTTCTTCTCGCACACACCAAACTCGATGATAAGGGAATCGATACCTGCAAAATCAAACCGATTTAAACCGGGGTCGGGACCGAGAAGTGGTCGGGACCGAGAAGTGGTCGGGACCAAGAAGGGGTCGGGACCGAGCCCTCTCGGCCCGGTTAGTTCTCCGCCGGTCGCTTTCCTCGTTCTCTGCCCCGGCGCTAGGTCGTTCTTTGAGCCGGCCCGTTACGTCATGGACCGATCTCCCCCAATCGATGATCTCAGGCTTCAACTCCTTGCATCAAAAGCCATTCTTGATCCAGAAAAATTACCACAGTCGATGAACAAGGAAGAGAAAGAAATCATGGAGGAAATTGCATACGGAACAATCATTATGAACCTGAGTGATAGTGTTCTGCAGCAGCTAATTGATCTAAAAACTGCGTATGAGATATGTAATAAGATAGACACCATTTTTCTTGTAAAAGATCTTCCAGACAAAGCCTATCTAAGAGACAGATTTGTCAACATGAGTTCGGGAAGAAGTCCACAACATTCTGATGAAGAGTGCCGCCACATGAGGAAAGTTGATAGGGGCACACCTCCGCCCGAGGCAGTCGAAAGAGAGATTGACCGACCAGTTCTCAGAGATACCGACCGACTAGATGATGGACAGAAGGCTACTAGTCGACCAGTTCTCGGACAGAAAGACAAACCGGTCGAAGGTCCGGATCAACAAGGTGACAAGATGGCCGCCTTAGAAGAGTAG

Coding sequence (CDS)

ATGGGTTGGGCCGTGGGCCGAGCAAGGGTCGGGACTGAGAAGTGGTCGGGACCGAGAAGGGGTCGGGACCGAGCAGGGGTCGGGATCGAGCCTTCTCGGCCCGGATTTACTCTCGGGTTTCTAACCCACTTGGCTTTTGCCAATGGCTTTTATACTCTGAGTTTAGTCGGCATCCTTAGGTCCGTCCCAATTTTGAGTTTCTTGATTGGTCGTAGATATGTAGATATTCAGAGGGACAAATTCGACCTCCTCAGTCGGTTCTCCCCTTTCAAGGGTGGTCGAATTAAGTCGATGACCAAGGCTCGGCCTTGCCTCTCCCGAGAGGCTCTTCTTTTCGAAGCACCGATGGCTCTCATCAAGATTCATGTCGCTTTTGGACCAAGTCGACGATCAAGGCTCGGTCCTACCTTGCCTGAATGGTCGGCCGCTGCACTCTACATGCCTCGGTCAAAATTTCACCTCAGATCGGGATTTCGCTTCGATGAAGCTCGCTTTACTTTATCATCCCCACAGACGACGACAATTGTTGATGCGTGGATTTTGACCCTCCGTCTCTTCTTCTCGCACACACCAAACTCGATGATAAGGGAATCGATACCTGCAAAATCAAACCGATTTAAACCGGGGTCGGGACCGAGAAGTGGTCGGGACCGAGAAGTGGTCGGGACCAAGAAGGGGTCGGGACCGAGCCCTCTCGGCCCGGTTAGTTCTCCGCCGGTCGCTTTCCTCGTTCTCTGCCCCGGCGCTAGGTCGTTCTTTGAGCCGGCCCGTTACGTCATGGACCGATCTCCCCCAATCGATGATCTCAGGCTTCAACTCCTTGCATCAAAAGCCATTCTTGATCCAGAAAAATTACCACAGTCGATGAACAAGGAAGAGAAAGAAATCATGGAGGAAATTGCATACGGAACAATCATTATGAACCTGAGTGATAGTGTTCTGCAGCAGCTAATTGATCTAAAAACTGCGTATGAGATATGTAATAAGATAGACACCATTTTTCTTGTAAAAGATCTTCCAGACAAAGCCTATCTAAGAGACAGATTTGTCAACATGAGTTCGGGAAGAAGTCCACAACATTCTGATGAAGAGTGCCGCCACATGAGGAAAGTTGATAGGGGCACACCTCCGCCCGAGGCAGTCGAAAGAGAGATTGACCGACCAGTTCTCAGAGATACCGACCGACTAGATGATGGACAGAAGGCTACTAGTCGACCAGTTCTCGGACAGAAAGACAAACCGGTCGAAGGTCCGGATCAACAAGGTGACAAGATGGCCGCCTTAGAAGAGTAG

Protein sequence

MGWAVGRARVGTEKWSGPRRGRDRAGVGIEPSRPGFTLGFLTHLAFANGFYTLSLVGILRSVPILSFLIGRRYVDIQRDKFDLLSRFSPFKGGRIKSMTKARPCLSREALLFEAPMALIKIHVAFGPSRRSRLGPTLPEWSAAALYMPRSKFHLRSGFRFDEARFTLSSPQTTTIVDAWILTLRLFFSHTPNSMIRESIPAKSNRFKPGSGPRSGRDREVVGTKKGSGPSPLGPVSSPPVAFLVLCPGARSFFEPARYVMDRSPPIDDLRLQLLASKAILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIFLVKDLPDKAYLRDRFVNMSSGRSPQHSDEECRHMRKVDRGTPPPEAVEREIDRPVLRDTDRLDDGQKATSRPVLGQKDKPVEGPDQQGDKMAALEE

Homology

[Close]

BLAST of Moc04g25010 vs. NCBI nr
Match: XP_038885928.1 (uncharacterized protein LOC120076236 [Benincasa hispida])

HSP 1 Score: 83.6 bits (205), Expect = 4.6e-12
Identity = 40/72 (55.56%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 278 AILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIFLVK 337
           AI DP K P+ + K EKE +E  AYGTI++N+ DSVL+Q++D  TAY + NK++ I+L K
Sbjct: 36  AITDPAKYPKILFKAEKETIESNAYGTIVLNVIDSVLRQIVDRPTAYALWNKLNDIYLNK 95

Query: 338 DLPDKAYLRDRF 350
           DLP+KA+LR+RF
Sbjct: 96  DLPNKAFLRERF 107

[Close]

BLAST of Moc04g25010 vs. NCBI nr
Match: XP_038902421.1 (uncharacterized protein LOC120089066 [Benincasa hispida])

HSP 1 Score: 83.2 bits (204), Expect = 6.1e-12
Identity = 38/72 (52.78%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 278 AILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIFLVK 337
           AI DP K P+++   EK I+E  AYGTI++N++DSVL+Q++D +TA++ CNK++ I+L K
Sbjct: 36  AITDPTKYPKTLTDAEKGIIEVNAYGTIVLNITDSVLRQIVDQQTAFDHCNKLNEIYLNK 95

Query: 338 DLPDKAYLRDRF 350
           DLP+KA+LR+ F
Sbjct: 96  DLPNKAFLREIF 107

[Close]

BLAST of Moc04g25010 vs. NCBI nr
Match: XP_038880370.1 (uncharacterized protein LOC120072018 [Benincasa hispida])

HSP 1 Score: 83.2 bits (204), Expect = 6.1e-12
Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 257 RYVMDRSPPIDDLRLQLLASKAIL----------DPEKLPQSMNKEEKEIMEEIAYGTII 316
           RY +++     D  LQ    KA+L          DP K P+++++ +KE +E  AYGTII
Sbjct: 5   RYEIEKFDGKIDFELQKAKIKAVLGQQKTLLAITDPTKYPETLSEADKETIELNAYGTII 64

Query: 317 MNLSDSVLQQLIDLKTAYEICNKIDTIFLVKDLPDKAYLRDRF 350
           +N++DS+L+Q++D  TAY + NK++ I+L KDLP+KA+ R+RF
Sbjct: 65  LNVTDSILRQIVDQPTAYALWNKLNEIYLNKDLPNKAFFRERF 107

[Close]

BLAST of Moc04g25010 vs. NCBI nr
Match: XP_038887098.1 (uncharacterized protein LOC120077280 [Benincasa hispida])

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-11
Identity = 39/78 (50.00%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 272 QLLASKAILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKID 331
           Q  A  AI DP K P+++++ EKE +E  AYGTII+N++DSVL+Q++D  T Y + NK++
Sbjct: 30  QQKALLAITDPSKYPETLSEAEKETIESNAYGTIILNVTDSVLRQIMDQPTVYALWNKLN 89

Query: 332 TIFLVKDLPDKAYLRDRF 350
            I+L KD P+K +LR+RF
Sbjct: 90  EIYLNKDFPNKNFLRERF 107

[Close]

BLAST of Moc04g25010 vs. NCBI nr
Match: KAA0060586.1 (putative gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 8.8e-11
Identity = 39/83 (46.99%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 277 KAILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIFLV 336
           KAI+DP++LP+++ KE+ E ME   YGTI++ LSD+VL ++ID +T YEI  K++ ++L 
Sbjct: 24  KAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLT 83

Query: 337 KDLPDKAYLRDRF--VNMSSGRS 358
           +DL ++AYL ++F   NM S  S
Sbjct: 84  RDLSNRAYLGEKFFTYNMDSNES 106

[Close]

BLAST of Moc04g25010 vs. ExPASy TrEMBL
Match: A0A5D3BSZ6 (Putative gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00930 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.2e-11
Identity = 39/83 (46.99%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 277 KAILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIFLV 336
           KAI+DP++LP+++ KE+ E ME   YGTI++ LSD+VL ++ID +T YEI  K++ ++L 
Sbjct: 24  KAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLT 83

Query: 337 KDLPDKAYLRDRF--VNMSSGRS 358
           +DL ++AYL ++F   NM S  S
Sbjct: 84  RDLSNRAYLGEKFFTYNMDSNES 106

[Close]

BLAST of Moc04g25010 vs. ExPASy TrEMBL
Match: A0A5A7V269 (Putative gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004590 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.2e-11
Identity = 39/83 (46.99%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 277 KAILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIFLV 336
           KAI+DP++LP+++ KE+ E ME   YGTI++ LSD+VL ++ID +T YEI  K++ ++L 
Sbjct: 24  KAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLT 83

Query: 337 KDLPDKAYLRDRF--VNMSSGRS 358
           +DL ++AYL ++F   NM S  S
Sbjct: 84  RDLSNRAYLGEKFFTYNMDSNES 106

[Close]

BLAST of Moc04g25010 vs. ExPASy TrEMBL
Match: A0A5A7TAZ3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00070 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-10
Identity = 35/83 (42.17%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 275 ASKAILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIF 334
           A K I DP+ LP +MN+ +K+ MEE  Y  +I+N++D+VL+Q+I+  T YEIC K+  ++
Sbjct: 33  ALKDIQDPKNLPATMNEVDKQSMEETTYEILILNITDNVLRQVINENTTYEICEKLTALY 92

Query: 335 LVKDLPDKAYLRDRFVNMSSGRS 358
             KDLP K Y+R++  +    +S
Sbjct: 93  DKKDLPSKLYMREKLFSFKMNQS 115

[Close]

BLAST of Moc04g25010 vs. ExPASy TrEMBL
Match: A0A5A7U6R2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00930 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-09
Identity = 34/97 (35.05%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 275 ASKAILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIF 334
           A KA+ DP++LP ++ K E+E +EE+AY T+IMN++D+VL+Q+I+  TA+    K+ +++
Sbjct: 33  ALKALEDPKELPATLTKSERETLEEVAYSTLIMNITDNVLRQVIEETTAFATWEKLKSLY 92

Query: 335 LVKDLPDKAYLRDRFVNMSSGRSPQHSDEECRHMRKV 372
             KDLP+K +++++  +    ++ ++ DE     +K+
Sbjct: 93  EKKDLPNKMFIKEKLFSFKKNQN-KNLDENLDEFKKL 128

[Close]

BLAST of Moc04g25010 vs. ExPASy TrEMBL
Match: A0A5C7HB65 (gag_pre-integrs domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019315 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-09
Identity = 36/72 (50.00%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 277 KAILDPEKLPQSMNKEEKEIMEEIAYGTIIMNLSDSVLQQLIDLKTAYEICNKIDTIFLV 336
           KAI  PEKLP S+  E+K+ M E+A GTII+NLSD+VL+++ D KTA ++  K+++++L 
Sbjct: 106 KAIEGPEKLPDSLTVEQKDDMLEMALGTIILNLSDNVLREINDEKTACDVWKKLESLYLT 165

Query: 337 KDLPDKAYLRDR 349
           K L +K YL++R
Sbjct: 166 KSLTNKIYLKER 177

The following BLAST results are available for this feature:

BLAST of Moc04g25010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885928.1	4.6e-12	55.56	uncharacterized protein LOC120076236 [Benincasa hispida]	[more]
XP_038902421.1	6.1e-12	52.78	uncharacterized protein LOC120089066 [Benincasa hispida]	[more]
XP_038880370.1	6.1e-12	41.75	uncharacterized protein LOC120072018 [Benincasa hispida]	[more]
XP_038887098.1	2.3e-11	50.00	uncharacterized protein LOC120077280 [Benincasa hispida]	[more]
KAA0060586.1	8.8e-11	46.99	putative gag protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc04g25010 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g25010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSZ6	4.2e-11	46.99	Putative gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G...	[more]
A0A5A7V269	4.2e-11	46.99	Putative gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G...	[more]
A0A5A7TAZ3	2.7e-10	42.17	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U6R2	1.0e-09	35.05	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5C7HB65	1.8e-09	50.00	gag_pre-integrs domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62...	[more]

BLAST of Moc04g25010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..430
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..430
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g25010.1	Moc04g25010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0046872	metal ion binding