Moc04g24960 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g24960
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr4: 18111335 .. 18112951 (+)
RNA-Seq Expression	Moc04g24960
Synteny	Moc04g24960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCGGAGAAAAGTCCACAATGCTCTGATGACGATTGTCATCCAAGAAGGAGGCTCAACAGGGATGATCCTCAAATAGGAGGAGCTGGAGACGGAACGAGCCAACTAGGAGGCCGAGAACTGCTCGAGATCCGTGTTACCGCCGTCCCGGAGCAATTCCAGAGTAAGTTTGCAGCCCTGGAAGAAAAGGTGGAAAGAATGTTTCAGCGCATGACCCAAGTACTCAAACAATTAGAGTAGCGAGAGACAGATCAATCACCTCTTCTCAAGGATCCCCGAAAGGGAAAAGGTCTTGTACCAAGCGAGGTTGAAGAATTGACAAACAACGCGTAGAGCATATTGAGGCTGAGAGGAAAGGACAAGAGATGCACCCGAATTCTTGACTGTTGGAGTCCACAGAAGGACAAAAGGCAAACAAAGTCCCCAGTACAAAATGAAGGCAAAGGCGACCAAAATAGCCCAGATCTCGAATCATTAGATTTCGACAAGGAGAAACCAGAAGAACGACCCGAGCCATCAGAAAGACAATTAGGTCAGAAAGTGAAAGAGTTTGATCTCGAAGAGCTACTAGACCAAGCTGATTCGCCATTTACAGAAGAGATCATGGAGGAGAAGGTACCTCCAAAATACAAACTGCCAACTATAAAGCAGTTTGACGGGTCGGCCGATCCGGTGGATCACCTTGATACCTTTCGAGAATGGATGGAAATATATGGAGTGTCGGAAGCAATACGGTGTCGAGTGTTCTCCTTCACCCTTAGCGGGTTAGCCGGAGTATGGTTTCGACAGCTAAAACGAGGTTCGATCTCCAACTTCAAAAGTTTGGCAAGGGCATTTGTGACCTAGTTTGTGGGAGGACGAAGTCGAAGCCGACCCGTGGCCTACCTTCTAACAATCAAGCAGAGGACAACAGAGAGCCTTGACAACTACGTTGCTCGGTTTAACTAAAAAAAGCTACAGGTTGAGGGTCTAACTGATGCGGTGTCCCTATTAGCATTCATGTCTAGAATGAAAGGATGAACACTTGTCATTCTCATTCGGAAAGAAAACTCGAGCACTTTTTCAGAGGCTCTGAGCCGAGCCCAGAAATATATGAGGGCAGGGGAATTCTTCCATTCGAAAAAGGAGTCCGAAGGAAAGCGGTTCGACCAGAAAAGGGAACAGACAGGAGATAAACAACAAGGATCAAGGTGGGAGAAGCGCGATCGAACCAGCTAGAAAGAGCTACCCCAGAAATTTGAGAAGTACACTCCCACAATAGTCCCACTTGAACAGGTGTTAATGGAAATCAAGGACCAGAAAATGAAAGCACCTTTTAGTAAGAGAAGTAAGGGGAAATACTGTCTTTTCCACCGAGACCACAGCCACGCCACCCAAGACTGTTTTGACCTCAAAGAAGAGGTGGAGGGACTCATTCGGAGAGAATATCTCAAAGCATATTTGGAGAACTCTAAAGCAACACTAATTGAAGAGAATGACAACAAGTCACATGACAAGAAAATCCGAACAATCATGGGTGGTCCAACGGTGTCTGGTCGGAAGAGAAAGGCCAGTGTACGGGAAGCAAGGACAAGTTATGATCAACATGAAGTATACCATGCCTTTCAAGCATGA

mRNA sequence

ATGACTCCGGAGAAAAGTCCACAATGCTCTGATGACGATTGTCATCCAAGAAGGAGGCTCAACAGGGATGATCCTCAAATAGGAGGAGCTGGAGACGGAACGAGCCAACTAGGAGGCCGAGAACTGCTCGAGATCCGTGTTACCGCCGTCCCGGAGCAATTCCAGAGTAAGTTTGCAGCCCTGGAAGAAAAGGTGGAAAGAATGTTTCAGCGCATGACCCAAAGCATATTGAGGCTGAGAGGAAAGGACAAGAGATGCACCCGAATTCTTGACTGTTGGAGTCCACAGAAGGACAAAAGGCAAACAAAGTCCCCAGTACAAAATGAAGGCAAAGGCGACCAAAATAGCCCAGATCTCGAATCATTAGATTTCGACAAGGAGAAACCAGAAGAACGACCCGAGCCATCAGAAAGACAATTAGGTCAGAAAGTGAAAGAGTTTGATCTCGAAGAGCTACTAGACCAAGCTGATTCGCCATTTACAGAAGAGATCATGGAGGAGAAGGTACCTCCAAAATACAAACTGCCAACTATAAAGCAGTTTGACGGGTCGGCCGATCCGGTGGATCACCTTGATACCTTTCGAGAATGGATGGAAATATATGGAGTGTCGGAAGCAATACGGTGTCGAGTGTTCTCCTTCACCCTTAGCGGGTTAGCCGGAGTGTTAATGGAAATCAAGGACCAGAAAATGAAAGCACCTTTTAGTAAGAGAAGTAAGGGGAAATACTGTCTTTTCCACCGAGACCACAGCCACGCCACCCAAGACTGTTTTGACCTCAAAGAAGAGGTGGAGGGACTCATTCGGAGAGAATATCTCAAAGCATATTTGGAGAACTCTAAAGCAACACTAATTGAAGAGAATGACAACAAGTCACATGACAAGAAAATCCGAACAATCATGGGTGGTCCAACGGTGTCTGGTCGGAAGAGAAAGGCCAGTGTACGGGAAGCAAGGACAAGTTATGATCAACATGAAGTATACCATGCCTTTCAAGCATGA

Coding sequence (CDS)

ATGACTCCGGAGAAAAGTCCACAATGCTCTGATGACGATTGTCATCCAAGAAGGAGGCTCAACAGGGATGATCCTCAAATAGGAGGAGCTGGAGACGGAACGAGCCAACTAGGAGGCCGAGAACTGCTCGAGATCCGTGTTACCGCCGTCCCGGAGCAATTCCAGAGTAAGTTTGCAGCCCTGGAAGAAAAGGTGGAAAGAATGTTTCAGCGCATGACCCAAAGCATATTGAGGCTGAGAGGAAAGGACAAGAGATGCACCCGAATTCTTGACTGTTGGAGTCCACAGAAGGACAAAAGGCAAACAAAGTCCCCAGTACAAAATGAAGGCAAAGGCGACCAAAATAGCCCAGATCTCGAATCATTAGATTTCGACAAGGAGAAACCAGAAGAACGACCCGAGCCATCAGAAAGACAATTAGGTCAGAAAGTGAAAGAGTTTGATCTCGAAGAGCTACTAGACCAAGCTGATTCGCCATTTACAGAAGAGATCATGGAGGAGAAGGTACCTCCAAAATACAAACTGCCAACTATAAAGCAGTTTGACGGGTCGGCCGATCCGGTGGATCACCTTGATACCTTTCGAGAATGGATGGAAATATATGGAGTGTCGGAAGCAATACGGTGTCGAGTGTTCTCCTTCACCCTTAGCGGGTTAGCCGGAGTGTTAATGGAAATCAAGGACCAGAAAATGAAAGCACCTTTTAGTAAGAGAAGTAAGGGGAAATACTGTCTTTTCCACCGAGACCACAGCCACGCCACCCAAGACTGTTTTGACCTCAAAGAAGAGGTGGAGGGACTCATTCGGAGAGAATATCTCAAAGCATATTTGGAGAACTCTAAAGCAACACTAATTGAAGAGAATGACAACAAGTCACATGACAAGAAAATCCGAACAATCATGGGTGGTCCAACGGTGTCTGGTCGGAAGAGAAAGGCCAGTGTACGGGAAGCAAGGACAAGTTATGATCAACATGAAGTATACCATGCCTTTCAAGCATGA

Protein sequence

MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQLGGRELLEIRVTAVPEQFQSKFAALEEKVERMFQRMTQSILRLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQFDGSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLAGVLMEIKDQKMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGPTVSGRKRKASVREARTSYDQHEVYHAFQA

Homology

[Close]

BLAST of Moc04g24960 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 303.5 bits (776), Expect = 2.2e-78
Identity = 213/530 (40.19%), Postives = 249/530 (46.98%), Query Frame = 0


Query: 1   MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQLGGRE---LLEIRVTAVPEQFQSK 60
           MTPE+SP+ SDDDC  +RRLN  DPQ+GG  DGTSQ        L E      PE FQ +
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAALEEK-----------------VERMFQRMTQSI---LRLRGKDKRCTRILDCWSPQK 120
           FA LE+K                  E   +  T S+   LR+ G  ++ TRI D   P+K
Sbjct: 61  FAVLEDKESDEVPLVRDPKKGKGPTESDTEESTNSVGSKLRIGGNTRQRTRIFD---PRK 120

Query: 121 DKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQAD 180
            K+Q KSP  N GK D +  + E +  DK KP +RPE SE++   K K FDLEELLDQAD
Sbjct: 121 TKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGFDLEELLDQAD 180

Query: 181 SPFTEEIMEEKVPPKYKLPTIKQFDGSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLS 240
           SPFTEEIM EKVPPK+KLPT+KQFD + DPVDHLD +REWM+IYGVSEA+RCRVFS TL+
Sbjct: 181 SPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLN 240

Query: 241 GLA--------------------------------------------------------- 300
           G A                                                         
Sbjct: 241 GSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARF 300

Query: 301 ------------------------------------------------------------ 332
                                                                       
Sbjct: 301 NEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSK 360

[Close]

BLAST of Moc04g24960 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 176.4 bits (446), Expect = 4.1e-40
Identity = 132/312 (42.31%), Postives = 157/312 (50.32%), Query Frame = 0


Query: 100 RQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSP 159
           +Q KSP  N GK D      E +  DK KP +RPE SE++  QK K FDLEELLDQADSP
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSP 100

Query: 160 FTEEIMEEKVPPKYKLPTIKQF-------DGSADPV-----------DHL---------D 219
           FTEEIM EK   +     + +F       +G  D V           +HL          
Sbjct: 101 FTEEIMREKRTTESLHDYVTRFNKEKLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPS 160

Query: 220 TFREWME-----------IYGVSEAIRCRV------------------------------ 279
           TF E +             Y   E+   R                               
Sbjct: 161 TFSEALSRAQRYMSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQK 220

Query: 280 ---FSFTLSGLAGVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLK 332
              ++ T   L  VLMEIK+Q       +M A  +KRSKG+YCLFH DH HATQDCFDLK
Sbjct: 221 FEKYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLK 280

[Close]

BLAST of Moc04g24960 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 159.5 bits (402), Expect = 5.2e-35
Identity = 85/140 (60.71%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 83  DKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQ 142
           ++R TRI D    QK K+Q KS   N  K D ++ + E +  +K KP +RPE SE++  Q
Sbjct: 11  ERRRTRIFD---SQKIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQ 70

Query: 143 KVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQFDGSADPVDHLDTFREWMEIYG 202
           K K FDLEELL QADSPFTEEIM EKVPPK+KLPT+K FDG  +PVDHLD +REWM+IYG
Sbjct: 71  KEKGFDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYG 130

Query: 203 VSEAIRCRVFSFTLSGLAGV 223
           VS+AIRCRVFS TL+G A +
Sbjct: 131 VSDAIRCRVFSTTLNGSARI 147

[Close]

BLAST of Moc04g24960 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 156.4 bits (394), Expect = 4.4e-34
Identity = 104/221 (47.06%), Postives = 126/221 (57.01%), Query Frame = 0


Query: 1   MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQ--LGGRE-LLEIRVTAVPEQFQSK 60
           MTPE+SP+ SDD+C  +RRLN DDPQ+GG  DGTSQ  L  +E L E      PE  Q +
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAALEEKVERMFQRMTQ--------------------------------------SILRL 120
           FA LE+KVE M QRMTQ                                      S LR+
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120

Query: 121 RGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQ 180
            G  +R T+I D    QK K+Q K    N G+ D +  + E +  DK KP ++PE SE++
Sbjct: 121 GGNTRRRTQIFD---SQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKR 180

[Close]

BLAST of Moc04g24960 vs. NCBI nr
Match: XP_022150028.1 (uncharacterized protein LOC111018300 [Momordica charantia])

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-31
Identity = 80/124 (64.52%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 219 LAGVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRRE 278
           L  VLMEIK Q       +M AP SKRSKG+YCLFHRDH HATQDCFDLK+EV+ LI+R 
Sbjct: 4   LEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQRG 63

Query: 279 YLKAYLENSKATLIEENDNKSHDKKIRTIMGGPTVS--GRKRKASVREARTSYDQHEVYH 334
           YLK Y+E+ KAT   END+KS  ++IRTIMGGP     GRKRKAS+RE RTS  QHE+YH
Sbjct: 64  YLKEYVEDPKATQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIRETRTSQVQHEIYH 123

[Close]

BLAST of Moc04g24960 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 213/530 (40.19%), Postives = 249/530 (46.98%), Query Frame = 0


Query: 1   MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQLGGRE---LLEIRVTAVPEQFQSK 60
           MTPE+SP+ SDDDC  +RRLN  DPQ+GG  DGTSQ        L E      PE FQ +
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAALEEK-----------------VERMFQRMTQSI---LRLRGKDKRCTRILDCWSPQK 120
           FA LE+K                  E   +  T S+   LR+ G  ++ TRI D   P+K
Sbjct: 61  FAVLEDKESDEVPLVRDPKKGKGPTESDTEESTNSVGSKLRIGGNTRQRTRIFD---PRK 120

Query: 121 DKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQAD 180
            K+Q KSP  N GK D +  + E +  DK KP +RPE SE++   K K FDLEELLDQAD
Sbjct: 121 TKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGFDLEELLDQAD 180

Query: 181 SPFTEEIMEEKVPPKYKLPTIKQFDGSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLS 240
           SPFTEEIM EKVPPK+KLPT+KQFD + DPVDHLD +REWM+IYGVSEA+RCRVFS TL+
Sbjct: 181 SPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLN 240

Query: 241 GLA--------------------------------------------------------- 300
           G A                                                         
Sbjct: 241 GSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARF 300

Query: 301 ------------------------------------------------------------ 332
                                                                       
Sbjct: 301 NEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSK 360

[Close]

BLAST of Moc04g24960 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-40
Identity = 132/312 (42.31%), Postives = 157/312 (50.32%), Query Frame = 0


Query: 100 RQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSP 159
           +Q KSP  N GK D      E +  DK KP +RPE SE++  QK K FDLEELLDQADSP
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSP 100

Query: 160 FTEEIMEEKVPPKYKLPTIKQF-------DGSADPV-----------DHL---------D 219
           FTEEIM EK   +     + +F       +G  D V           +HL          
Sbjct: 101 FTEEIMREKRTTESLHDYVTRFNKEKLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPS 160

Query: 220 TFREWME-----------IYGVSEAIRCRV------------------------------ 279
           TF E +             Y   E+   R                               
Sbjct: 161 TFSEALSRAQRYMSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQK 220

Query: 280 ---FSFTLSGLAGVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLK 332
              ++ T   L  VLMEIK+Q       +M A  +KRSKG+YCLFH DH HATQDCFDLK
Sbjct: 221 FEKYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLK 280

[Close]

BLAST of Moc04g24960 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-35
Identity = 85/140 (60.71%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 83  DKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQ 142
           ++R TRI D    QK K+Q KS   N  K D ++ + E +  +K KP +RPE SE++  Q
Sbjct: 11  ERRRTRIFD---SQKIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQ 70

Query: 143 KVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQFDGSADPVDHLDTFREWMEIYG 202
           K K FDLEELL QADSPFTEEIM EKVPPK+KLPT+K FDG  +PVDHLD +REWM+IYG
Sbjct: 71  KEKGFDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYG 130

Query: 203 VSEAIRCRVFSFTLSGLAGV 223
           VS+AIRCRVFS TL+G A +
Sbjct: 131 VSDAIRCRVFSTTLNGSARI 147

[Close]

BLAST of Moc04g24960 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-34
Identity = 104/221 (47.06%), Postives = 126/221 (57.01%), Query Frame = 0


Query: 1   MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQ--LGGRE-LLEIRVTAVPEQFQSK 60
           MTPE+SP+ SDD+C  +RRLN DDPQ+GG  DGTSQ  L  +E L E      PE  Q +
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAALEEKVERMFQRMTQ--------------------------------------SILRL 120
           FA LE+KVE M QRMTQ                                      S LR+
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120

Query: 121 RGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQ 180
            G  +R T+I D    QK K+Q K    N G+ D +  + E +  DK KP ++PE SE++
Sbjct: 121 GGNTRRRTQIFD---SQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKR 180

[Close]

BLAST of Moc04g24960 vs. ExPASy TrEMBL
Match: A0A6J1D8C9 (uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018300 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.8e-32
Identity = 80/124 (64.52%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 219 LAGVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRRE 278
           L  VLMEIK Q       +M AP SKRSKG+YCLFHRDH HATQDCFDLK+EV+ LI+R 
Sbjct: 4   LEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQRG 63

Query: 279 YLKAYLENSKATLIEENDNKSHDKKIRTIMGGPTVS--GRKRKASVREARTSYDQHEVYH 334
           YLK Y+E+ KAT   END+KS  ++IRTIMGGP     GRKRKAS+RE RTS  QHE+YH
Sbjct: 64  YLKEYVEDPKATQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIRETRTSQVQHEIYH 123

The following BLAST results are available for this feature:

BLAST of Moc04g24960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	2.2e-78	40.19	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022142767.1	4.1e-40	42.31	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022159109.1	5.2e-35	60.71	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022145129.1	4.4e-34	47.06	uncharacterized protein LOC111014646 [Momordica charantia]	[more]
XP_022150028.1	2.0e-31	64.52	uncharacterized protein LOC111018300 [Momordica charantia]	[more]

BLAST of Moc04g24960 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g24960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	1.1e-78	40.19	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	2.0e-40	42.31	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1E1E7	2.5e-35	60.71	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CUA7	2.1e-34	47.06	uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1D8C9	9.8e-32	64.52	uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Moc04g24960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g24960.1	Moc04g24960.1	mRNA