Moc04g24920 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g24920
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr4: 18047010 .. 18050077 (-)
RNA-Seq Expression	Moc04g24920
Synteny	Moc04g24920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTGGCTGCAAAAGATGGGAAAGATGAAGGTGGATTGGCCCGCGCTTACCTTGGTGTTTAAAATGGAAGGGAAGAATATTCAACTTAGGGGTGATCTGACTTTAACTAAGCTTGAAGTATCTTTCAAGAGGCCGTCTCGAGTTTGGGAAAGCCATGATCAGGGTTATCTAGTGGAAATGTGGGCATTACAGGCGATGGCTGAAGGACACCCGAAGGACAATTTAGTTAATCCACCCACTCATCCTCGATCGATTATGAGGCTTCTAGAGGAGTATTCCTCTGTTTTTCATCTTCCAGAAACATTACCCCTAAGCAGGGCCATAGACCACCGTATACTGCTGAAAGAAGGCACCGACCCTGTGAATGTTCGTCCGTATCGTACCAGTATCCCCAGGTGCAGAAAGCAGAGATCGAACGACTGGTGGCAGAAATGTTGGACGCAGGGATTATTCGTCCTAGTGTTAGTCCTTATTCTAGTCCTTATTCTAGTCCTATTATGCTGGTAAAGAAAAAAGATGGTAGCGGGAGGTTTTGTGTAGATTATCGGGCTCTAAATAATGCGACCATACCTGATAAGTTTCCCATACCGGTGATCGAGGAACTTTTGGATGAGCTACATGGGTCATGCATATCAAAGATTGACCTCAAGTCTGGGTACCACCAGATTCGGGTTGCCTCAGAAGATGTACCTAAGACTGCGTTTCGCACACATGAGGTTACGAGTTTTTAGTAATGCCTTTTGGCTTGACAAACGCACCCTCGACGTTTCAAGCACTTATAATTCAGGTATTCCATCCCTTCTTACGCAAGTTTATCCCGGTTTTCTTTGACGACATTTTAGTATATAGCCCGAACTTAGAGAGTCATGTGACCCATTTAACCGTGGTGTTTAACCTGCCGAGGGACCATGAATTGTATGCAAACTTGAAGAAGTGTCAATTTGCTCAGGACCGGATTGAATACTTAGGCCATTGGGTTTCTGCCAACGGAGTGGAGGCTGATCCGGAGAAGGTGCGTGCGATGCTCCAATGGCCGATACCGGTGAATATAAAGGAGTTACGGGGATTTCTGGGGTTGACCGGCTATTACCGACGGTTTGTAGCAAACTATGGGTCCTTGGTGTCATGGTCATGCTTGTCCAGGGCCTGTTGCCCGTGGCCGCATGCCTATAACAACCTCTTTCCACATGCTTTCATGCCATGTATTTAGTTTTGCTTGTTATTTAGTTTTCCTTGTACTTTTGGTGGCAAGTGACTCCTCGCCACTTTGCATGTTCACGCCTGCCAAAGGCAAAATGCTTTATAATCTATCTTAGGGGGGTACACCTAGTCTCCTCCCTACATTGCGTTGTATTCTTGTCTTGCCGCTAATCTATTCTCTTGCATTCAAGCTTACAACAACTTCCAAAATGCTTACAAACGTTTTCCAAAACCTTTTTCTCTAACCCCGTTTTCCAAAACCGTTTTCCCGAAAACGGGGGTGGAGGTTGCGCCATATAGCCTTTGTGCCACCGACTATTTGTTTCCGCATTGGCTGACTTGCTAGAGGGTGAAAGCAAGTGCCGCACAATCGCTTCCCGAGTCCCGTTAAAGTGCGACTGTGACAGTTGGTATCAGAGCCTAGTTGGCTCCTCGAGTTGGAAAACAGTAACCATGTCCGTGACAAAGCAGTTGGGCAAGTCCCACGTCGACGACTCGTCGAGATCGAAGAACAGCTGTTGTTCTTGAGGGAAATCCCTGACAACCTTAGATATGTGGAATCTCGGCTGGATGAGATCTCCACCAAAGCTGACGGAATTGACGTCGTGAATGCCCGCATAGACGGGCTTGCTATACGTGAGTTAATGCTTCGGATTGAGACCTTTGAAGACAAGGTTAAGCGTACTGATAACCTTGAGCGTGGCGAAAGCTCATCGAGCTCAATCGCCCACATGGAGGAGCGTGTCGAAGAAATAGACATCTCCCAAAAGACTATTGTGCAGATGGTCAGTGAGCTGACCGACAACTTCAAAGCCACCATCGACGAAATGAGGGCAGAGATTGCCGAATTAGGCACCAAAGTAAATCTCACCATGAGAGCGGTGGGAAACCAGGCCCCAGCTGGGGGACCGATTCAGTTCAACAAGGTGAAAGTTCCCGAACCCAAGCCCTTCTGTGGGGCGCGAGATGCTAAAGCTCTTGAGAACTTCATCTTCGACCTTGAGCAGTACTTCAAGGCGACAAGCACGGTGACAGAGGAATCGAAAGTCACACTAGCCACAATGCATCTTGCTGACGATGCGAAGTTGTGGTGGAGAGCGAGATACGTGGATGTACAAGAGGGCAAATGTACCATCGACACGTGGGAAAAACTAAAGCAGGAACTCAGATCCCAATTTTTCCCGGAGAATGTAGAGATTCTTGCTCGTCGTAAACTGCGTGAATTACGACACACAGGAAATATTCGAGACTACGTAAAGCAGTTTTCAGGGTTGATGTTGGATATCCGCGATATGTCCGAGAAAGACAAGGTCTTCGCCTTCGTGGAGGGCTTGAAACCATGGGCCCGAGCCAAACTATATGAACAGAAGGTACAAGATATCTCTACTGCTTACGCAACAGCCGAACGACTGTTCGATCTTAGCAACGACACGTCACAAGAGCAGAGGAAGACCCAAGCTTCTTCCAGTAGTGGAAACAGACCCGCTAGATCGGGGTCCCCTAAAAATGGGGGAGCTGACAGAAATGGAGGAGGAGACTGCAGACCCTTCCAGCAGAGAGGGGGAAATACGTGGAGAGGGCCGAACCCACCAAACAATAACAATCGAACAGGACCATCCTGCTTCATTTGTAAGGGACTGCACAGAGTATACGAGTGTCCGAATCGAGCTGCTCTCCGGGCCTTCCAAGCCACACTGACGAACGACCGAGCGATCGAACCGGGAGGCCCCGAAACAGATACTCCTCCCAAAGACGCCGATGACAACCCTCGTATGGGAGCACTCAAATTCTTATCGGCGCTTCAGAAGAAAGCCGAGGAAGTGAAGGAACCCCTGGAACGTGGTCTGATGTATGTGGAAACATGA

mRNA sequence

ATGCAGTGGCTGCAAAAGATGGGAAAGATGAAGGTGGATTGGCCCGCGCTTACCTTGGTGTTTAAAATGGAAGGGAAGAATATTCAACTTAGGGGTGATCTGACTTTAACTAAGCTTGAAGTATCTTTCAAGAGGCCGTCTCGAGTTTGGGAAAGCCATGATCAGGGTTATCTAGTGGAAATGTGGGCATTACAGGCGATGGCTGAAGGACACCCGAAGGACAATTTAGTTAATCCACCCACTCATCCTCGATCGATTATGAGGCTTCTAGAGGAGTATTCCTCTGTTTTTCATCTTCCAGAAACATTACCCCTAAGCAGGGCCATAGACCACCGTATACTGCTGAAAGAAGGCACCGACCCTGTGAATGTTCGTCCGTATCGTACCAAGCCTAGTTGGCTCCTCGAGTTGGAAAACAGTAACCATGTCCGTGACAAAGCAGTTGGGCAAGTCCCACGTCGACGACTCGTCGAGATCGAAGAACAGCTGTTGTTCTTGAGGGAAATCCCTGACAACCTTAGATATGTGGAATCTCGGCTGGATGAGATCTCCACCAAAGCTGACGGAATTGACGTCGTGAATGCCCGCATAGACGGGCTTGCTATACGTGAGTTAATGCTTCGGATTGAGACCTTTGAAGACAAGGTTAAGCGTACTGATAACCTTGAGCGTGGCGAAAGCTCATCGAGCTCAATCGCCCACATGGAGGAGCGTGTCGAAGAAATAGACATCTCCCAAAAGACTATTGTGCAGATGGTCAGTGAGCTGACCGACAACTTCAAAGCCACCATCGACGAAATGAGGGCAGAGATTGCCGAATTAGGCACCAAAGTAAATCTCACCATGAGAGCGGTGGGAAACCAGGCCCCAGCTGGGGGACCGATTCAGTTCAACAAGGTGAAAGTTCCCGAACCCAAGCCCTTCTGTGGGGCGCGAGATGCTAAAGCTCTTGAGAACTTCATCTTCGACCTTGAGCAGTACTTCAAGGCGACAAGCACGGTGACAGAGGAATCGAAAGTCACACTAGCCACAATGCATCTTGCTGACGATGCGAAGTTGTGGTGGAGAGCGAGATACGTGGATGTACAAGAGGGCAAATGTACCATCGACACGTGGGAAAAACTAAAGCAGGAACTCAGATCCCAATTTTTCCCGGAGAATGTAGAGATTCTTGCTCGTCGTAAACTGCGTGAATTACGACACACAGGAAATATTCGAGACTACGTAAAGCAGTTTTCAGGGTTGATGTTGGATATCCGCGATATGTCCGAGAAAGACAAGGTCTTCGCCTTCGTGGAGGGCTTGAAACCATGGGCCCGAGCCAAACTATATGAACAGAAGGTACAAGATATCTCTACTGCTTACGCAACAGCCGAACGACTGTTCGATCTTAGCAACGACACGTCACAAGAGCAGAGGAAGACCCAAGCTTCTTCCAGTAGTGGAAACAGACCCGCTAGATCGGGGTCCCCTAAAAATGGGGGAGCTGACAGAAATGGAGGAGGAGACTGCAGACCCTTCCAGCAGAGAGGGGGAAATACGTGGAGAGGGCCGAACCCACCAAACAATAACAATCGAACAGGACCATCCTGCTTCATTTGTAAGGGACTGCACAGAGTATACGAGTGTCCGAATCGAGCTGCTCTCCGGGCCTTCCAAGCCACACTGACGAACGACCGAGCGATCGAACCGGGAGGCCCCGAAACAGATACTCCTCCCAAAGACGCCGATGACAACCCTCGTATGGGAGCACTCAAATTCTTATCGGCGCTTCAGAAGAAAGCCGAGGAAGTGAAGGAACCCCTGGAACGTGGTCTGATGTATGTGGAAACATGA

Coding sequence (CDS)

ATGCAGTGGCTGCAAAAGATGGGAAAGATGAAGGTGGATTGGCCCGCGCTTACCTTGGTGTTTAAAATGGAAGGGAAGAATATTCAACTTAGGGGTGATCTGACTTTAACTAAGCTTGAAGTATCTTTCAAGAGGCCGTCTCGAGTTTGGGAAAGCCATGATCAGGGTTATCTAGTGGAAATGTGGGCATTACAGGCGATGGCTGAAGGACACCCGAAGGACAATTTAGTTAATCCACCCACTCATCCTCGATCGATTATGAGGCTTCTAGAGGAGTATTCCTCTGTTTTTCATCTTCCAGAAACATTACCCCTAAGCAGGGCCATAGACCACCGTATACTGCTGAAAGAAGGCACCGACCCTGTGAATGTTCGTCCGTATCGTACCAAGCCTAGTTGGCTCCTCGAGTTGGAAAACAGTAACCATGTCCGTGACAAAGCAGTTGGGCAAGTCCCACGTCGACGACTCGTCGAGATCGAAGAACAGCTGTTGTTCTTGAGGGAAATCCCTGACAACCTTAGATATGTGGAATCTCGGCTGGATGAGATCTCCACCAAAGCTGACGGAATTGACGTCGTGAATGCCCGCATAGACGGGCTTGCTATACGTGAGTTAATGCTTCGGATTGAGACCTTTGAAGACAAGGTTAAGCGTACTGATAACCTTGAGCGTGGCGAAAGCTCATCGAGCTCAATCGCCCACATGGAGGAGCGTGTCGAAGAAATAGACATCTCCCAAAAGACTATTGTGCAGATGGTCAGTGAGCTGACCGACAACTTCAAAGCCACCATCGACGAAATGAGGGCAGAGATTGCCGAATTAGGCACCAAAGTAAATCTCACCATGAGAGCGGTGGGAAACCAGGCCCCAGCTGGGGGACCGATTCAGTTCAACAAGGTGAAAGTTCCCGAACCCAAGCCCTTCTGTGGGGCGCGAGATGCTAAAGCTCTTGAGAACTTCATCTTCGACCTTGAGCAGTACTTCAAGGCGACAAGCACGGTGACAGAGGAATCGAAAGTCACACTAGCCACAATGCATCTTGCTGACGATGCGAAGTTGTGGTGGAGAGCGAGATACGTGGATGTACAAGAGGGCAAATGTACCATCGACACGTGGGAAAAACTAAAGCAGGAACTCAGATCCCAATTTTTCCCGGAGAATGTAGAGATTCTTGCTCGTCGTAAACTGCGTGAATTACGACACACAGGAAATATTCGAGACTACGTAAAGCAGTTTTCAGGGTTGATGTTGGATATCCGCGATATGTCCGAGAAAGACAAGGTCTTCGCCTTCGTGGAGGGCTTGAAACCATGGGCCCGAGCCAAACTATATGAACAGAAGGTACAAGATATCTCTACTGCTTACGCAACAGCCGAACGACTGTTCGATCTTAGCAACGACACGTCACAAGAGCAGAGGAAGACCCAAGCTTCTTCCAGTAGTGGAAACAGACCCGCTAGATCGGGGTCCCCTAAAAATGGGGGAGCTGACAGAAATGGAGGAGGAGACTGCAGACCCTTCCAGCAGAGAGGGGGAAATACGTGGAGAGGGCCGAACCCACCAAACAATAACAATCGAACAGGACCATCCTGCTTCATTTGTAAGGGACTGCACAGAGTATACGAGTGTCCGAATCGAGCTGCTCTCCGGGCCTTCCAAGCCACACTGACGAACGACCGAGCGATCGAACCGGGAGGCCCCGAAACAGATACTCCTCCCAAAGACGCCGATGACAACCCTCGTATGGGAGCACTCAAATTCTTATCGGCGCTTCAGAAGAAAGCCGAGGAAGTGAAGGAACCCCTGGAACGTGGTCTGATGTATGTGGAAACATGA

Protein sequence

MQWLQKMGKMKVDWPALTLVFKMEGKNIQLRGDLTLTKLEVSFKRPSRVWESHDQGYLVEMWALQAMAEGHPKDNLVNPPTHPRSIMRLLEEYSSVFHLPETLPLSRAIDHRILLKEGTDPVNVRPYRTKPSWLLELENSNHVRDKAVGQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELMLRIETFEDKVKRTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATIDEMRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLEQYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFPENVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYEQKVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCRPFQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPGGPETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET

Homology

[Close]

BLAST of Moc04g24920 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 741.5 bits (1913), Expect = 5.8e-210
Identity = 394/465 (84.73%), Postives = 410/465 (88.17%), Query Frame = 0


Query: 146 KAVGQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIREL 205
           K +G+    RLVEIEE+LLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIREL
Sbjct: 5   KQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIREL 64

Query: 206 MLRIETFEDKVKRTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATID 265
           MLR+ET EDKVKRTDNLERGESSSSSIAHMEERVEEIDIS+KTIVQMVSELTD+FKAT+D
Sbjct: 65  MLRVETLEDKVKRTDNLERGESSSSSIAHMEERVEEIDISKKTIVQMVSELTDDFKATVD 124

Query: 266 EMRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLE 325
           EMRAEIAELGT                             KPFCGARDAKALENFIFDLE
Sbjct: 125 EMRAEIAELGT-----------------------------KPFCGARDAKALENFIFDLE 184

Query: 326 QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFP 385
           QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQ   
Sbjct: 185 QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQ--- 244

Query: 386 ENVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE 445
            ++  +          TGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE
Sbjct: 245 -SINFVN-------YDTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE 304

Query: 446 QKVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCR 505
           QKVQDI TAYATAE+LF+LS+DTSQEQRKTQASSSSG+RPARSGSPKNGGAD+NGGGD R
Sbjct: 305 QKVQDIPTAYATAEQLFNLSSDTSQEQRKTQASSSSGHRPARSGSPKNGGADKNGGGDRR 364

Query: 506 PFQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPG 565
           PFQQRGGNTWRGPNPPNNNNRTGPSCFICKG HRVYECPNRAALRAFQATLTNDRAIEP 
Sbjct: 365 PFQQRGGNTWRGPNPPNNNNRTGPSCFICKGPHRVYECPNRAALRAFQATLTNDRAIEPE 424

Query: 566 GPETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVE 611
           GPETDTPP+DADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVE
Sbjct: 425 GPETDTPPEDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVE 429

[Close]

BLAST of Moc04g24920 vs. NCBI nr
Match: KAA0032849.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 581.6 bits (1498), Expect = 7.7e-162
Identity = 294/465 (63.23%), Postives = 375/465 (80.65%), Query Frame = 0


Query: 149 GQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELMLR 208
           G+  + RLVE+EEQ+L+L E+PD++RY+ESRL+EIS K + ID V  R++G  I+ELM R
Sbjct: 8   GKAQKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPIQELMTR 67

Query: 209 IETFEDKVK--RTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATIDE 268
           ++  E  V   RT N ERG+SS+ S+AH+EERV+E+D SQKT+++M++ ++++F+AT+D 
Sbjct: 68  VDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDV 127

Query: 269 MRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLEQ 328
           +R EIA++  +++LTMRA+ NQAPAGG I  ++VK+PEPKPFCGARDAKALEN+IFDLEQ
Sbjct: 128 VRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLEQ 187

Query: 329 YFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFPE 388
           YF+AT+TVTEE+KVTLATMHL++DAKLWWR+R+VD+Q+G+CTIDTW+ LK+ELRSQFFPE
Sbjct: 188 YFRATNTVTEEAKVTLATMHLSEDAKLWWRSRFVDIQKGRCTIDTWDALKRELRSQFFPE 247

Query: 389 NVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYEQ 448
           NVEILARRKLREL+HTG+IR+YVKQF+GLMLDIRDMSEKDKVF FVEGLKPWA+ KLYEQ
Sbjct: 248 NVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQ 307

Query: 449 KVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCRP 508
           +VQD+++AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR   GD R 
Sbjct: 308 RVQDLTSAYAAAERLFDLSND-SQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFSGDRRS 367

Query: 509 FQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPGG 568
           +Q   GN+WRG N  N +NR   SCFICKG H   ECPN+ A  AFQA+LT+D   +   
Sbjct: 368 YQSNTGNSWRGSNNQNLSNRP-LSCFICKGPHMARECPNKTAFNAFQASLTSDSDNQQSQ 427

Query: 569 PETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET 612
            E +    +  DNPRMGALKFLS+LQKK  E   P+ERGLMYV+T
Sbjct: 428 TEGEVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470

[Close]

BLAST of Moc04g24920 vs. NCBI nr
Match: KAA0045217.1 (uncharacterized protein E6C27_scaffold30G002260 [Cucumis melo var. makuwa])

HSP 1 Score: 580.5 bits (1495), Expect = 1.7e-161
Identity = 295/465 (63.44%), Postives = 374/465 (80.43%), Query Frame = 0


Query: 149 GQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELMLR 208
           G+  + RLVE+EEQ+L+L E+PD++RY+ESRL+EIS K + ID V  R++G  I ELM R
Sbjct: 8   GKASKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPILELMTR 67

Query: 209 IETFEDKVK--RTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATIDE 268
           ++  E  V   RT N ERG+SS+ S+AH+EERV+E+D SQKT+++M++ ++++F+AT+D 
Sbjct: 68  VDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDV 127

Query: 269 MRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLEQ 328
           +R EIA++  +++LTMRA+ NQAPAGG I  ++VK+PEPKPFCGARDAKALEN+IFDLEQ
Sbjct: 128 VRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLEQ 187

Query: 329 YFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFPE 388
           YF+AT+TVTEE+KVTLATMHL++DAKLWWR+R+VD+QEG CTIDTW+ LK+ELRSQFFPE
Sbjct: 188 YFRATNTVTEEAKVTLATMHLSEDAKLWWRSRFVDIQEGHCTIDTWDALKRELRSQFFPE 247

Query: 389 NVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYEQ 448
           NVEILARRKLREL+HTG+IR+YVKQF+GLMLDIRDMSEKDKVF FVEGLKPWA+ KLYEQ
Sbjct: 248 NVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQ 307

Query: 449 KVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCRP 508
           +VQD+++AYATAERLFDLSN+ SQ+ R+  +SSS G+R  R  SPK  G DR   GD R 
Sbjct: 308 RVQDLTSAYATAERLFDLSNN-SQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFNGDRRS 367

Query: 509 FQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPGG 568
            Q   GN+WRGP+  N +NR   SCFICKG H   ECPN+ A  AFQA+LT+D   +   
Sbjct: 368 HQSNTGNSWRGPSNQNLSNRP-LSCFICKGPHMARECPNKTAFNAFQASLTSDLDNQQSQ 427

Query: 569 PETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET 612
            E +    +  DNPRMGALKFLS+LQKK  E   P+ERGLMYV+T
Sbjct: 428 TEREVDQIEEADNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470

[Close]

BLAST of Moc04g24920 vs. NCBI nr
Match: KAA0037573.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 580.1 bits (1494), Expect = 2.2e-161
Identity = 295/466 (63.30%), Postives = 375/466 (80.47%), Query Frame = 0


Query: 148 VGQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELML 207
           +G+  + RLVE+EEQ+L+L E+PD++RY+ESRL+EIS K + ID V  R++G  I+ELM 
Sbjct: 7   LGKAQKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPIQELMT 66

Query: 208 RIETFEDKVK--RTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATID 267
           R++  E  V   RT N ERG+SS+ S+AH+EERV+E+D SQKT ++M++ ++++F+AT+D
Sbjct: 67  RVDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTRLEMINGMSEDFRATLD 126

Query: 268 EMRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLE 327
            +R EIA++  +++LTMRA+ NQAPAGG I  ++VK+PEPKPFCGARDAKALEN+IFDLE
Sbjct: 127 VVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLE 186

Query: 328 QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFP 387
           QYF+AT+TVTEE+KVTLATMHL++DAKLWWR+R+VD+QEG+CTIDTW+ LK+ELRSQFFP
Sbjct: 187 QYFRATNTVTEEAKVTLATMHLSEDAKLWWRSRFVDIQEGRCTIDTWDALKRELRSQFFP 246

Query: 388 ENVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE 447
           ENVEILARRKLREL+HTG+IR+YVKQF+GLMLDIRDMSEKDKVF FVEGLKPWA+ KLYE
Sbjct: 247 ENVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYE 306

Query: 448 QKVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCR 507
           Q+VQD+++AYATAERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR   GD R
Sbjct: 307 QRVQDLTSAYATAERLFDLSND-SQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFNGDRR 366

Query: 508 PFQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPG 567
             Q   GN+WRG +  N +NR   SCFICKG H   ECPN+ A  AFQA+LT+D   +  
Sbjct: 367 SHQSNTGNSWRGSSNQNLSNRP-LSCFICKGPHMTRECPNKTAFNAFQASLTSDSDNQQS 426

Query: 568 GPETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET 612
             E +    +  DNPRMGALKFLS+LQKK  E   P+ERGLMYV+T
Sbjct: 427 QTEGEVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470

[Close]

BLAST of Moc04g24920 vs. NCBI nr
Match: TYK03099.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 580.1 bits (1494), Expect = 2.2e-161
Identity = 294/466 (63.09%), Postives = 375/466 (80.47%), Query Frame = 0


Query: 148 VGQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELML 207
           +G+  + RLVE+EEQ+L+L E+PD++RY+ESRL+EIS K + ID V  R++G  I+ELM 
Sbjct: 7   LGKAQKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPIQELMT 66

Query: 208 RIETFEDKVK--RTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATID 267
           R++  E  V   RT N ERG+SS+ S+AH+EERV+E+D SQKT+++M++ ++++F+AT+D
Sbjct: 67  RVDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLD 126

Query: 268 EMRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLE 327
            +R EIA++  +++LTMRA+ NQAPAGG I  ++VK+PEPKPFCGARDAKALEN+IFDLE
Sbjct: 127 VVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLE 186

Query: 328 QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFP 387
           QYF+AT+TVTEE+KVTLATMHL++DAKLWWR+R+VD+QEG+CTIDTW+ LK+ELRSQFFP
Sbjct: 187 QYFRATNTVTEEAKVTLATMHLSEDAKLWWRSRFVDIQEGRCTIDTWDALKRELRSQFFP 246

Query: 388 ENVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE 447
           ENVEILARRKLREL+HTG+IR+YVKQF+GLMLDIRDMSEKDKVF FVEGLKPWA+ KLYE
Sbjct: 247 ENVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYE 306

Query: 448 QKVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCR 507
           Q+VQD+++AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR   GD R
Sbjct: 307 QRVQDLTSAYAAAERLFDLSND-SQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFSGDRR 366

Query: 508 PFQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPG 567
             Q   GN+WRG +  N +NR   SCFICKG H   ECPN+ A  AFQA+LT+D   +  
Sbjct: 367 SHQSNTGNSWRGSSNQNLSNRP-LSCFICKGPHMARECPNKTAFNAFQASLTSDSDNQQS 426

Query: 568 GPETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET 612
             E +    +  DNPRMGALKFLS+LQKK  E   P+ERGLMYV+T
Sbjct: 427 QTEGEVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470

[Close]

BLAST of Moc04g24920 vs. ExPASy TrEMBL
Match: A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 2.8e-210
Identity = 394/465 (84.73%), Postives = 410/465 (88.17%), Query Frame = 0


Query: 146 KAVGQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIREL 205
           K +G+    RLVEIEE+LLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIREL
Sbjct: 5   KQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIREL 64

Query: 206 MLRIETFEDKVKRTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATID 265
           MLR+ET EDKVKRTDNLERGESSSSSIAHMEERVEEIDIS+KTIVQMVSELTD+FKAT+D
Sbjct: 65  MLRVETLEDKVKRTDNLERGESSSSSIAHMEERVEEIDISKKTIVQMVSELTDDFKATVD 124

Query: 266 EMRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLE 325
           EMRAEIAELGT                             KPFCGARDAKALENFIFDLE
Sbjct: 125 EMRAEIAELGT-----------------------------KPFCGARDAKALENFIFDLE 184

Query: 326 QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFP 385
           QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQ   
Sbjct: 185 QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQ--- 244

Query: 386 ENVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE 445
            ++  +          TGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE
Sbjct: 245 -SINFVN-------YDTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE 304

Query: 446 QKVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCR 505
           QKVQDI TAYATAE+LF+LS+DTSQEQRKTQASSSSG+RPARSGSPKNGGAD+NGGGD R
Sbjct: 305 QKVQDIPTAYATAEQLFNLSSDTSQEQRKTQASSSSGHRPARSGSPKNGGADKNGGGDRR 364

Query: 506 PFQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPG 565
           PFQQRGGNTWRGPNPPNNNNRTGPSCFICKG HRVYECPNRAALRAFQATLTNDRAIEP 
Sbjct: 365 PFQQRGGNTWRGPNPPNNNNRTGPSCFICKGPHRVYECPNRAALRAFQATLTNDRAIEPE 424

Query: 566 GPETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVE 611
           GPETDTPP+DADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVE
Sbjct: 425 GPETDTPPEDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVE 429

[Close]

BLAST of Moc04g24920 vs. ExPASy TrEMBL
Match: A0A5A7SUK4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G00100 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 3.7e-162
Identity = 294/465 (63.23%), Postives = 375/465 (80.65%), Query Frame = 0


Query: 149 GQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELMLR 208
           G+  + RLVE+EEQ+L+L E+PD++RY+ESRL+EIS K + ID V  R++G  I+ELM R
Sbjct: 8   GKAQKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPIQELMTR 67

Query: 209 IETFEDKVK--RTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATIDE 268
           ++  E  V   RT N ERG+SS+ S+AH+EERV+E+D SQKT+++M++ ++++F+AT+D 
Sbjct: 68  VDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDV 127

Query: 269 MRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLEQ 328
           +R EIA++  +++LTMRA+ NQAPAGG I  ++VK+PEPKPFCGARDAKALEN+IFDLEQ
Sbjct: 128 VRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLEQ 187

Query: 329 YFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFPE 388
           YF+AT+TVTEE+KVTLATMHL++DAKLWWR+R+VD+Q+G+CTIDTW+ LK+ELRSQFFPE
Sbjct: 188 YFRATNTVTEEAKVTLATMHLSEDAKLWWRSRFVDIQKGRCTIDTWDALKRELRSQFFPE 247

Query: 389 NVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYEQ 448
           NVEILARRKLREL+HTG+IR+YVKQF+GLMLDIRDMSEKDKVF FVEGLKPWA+ KLYEQ
Sbjct: 248 NVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQ 307

Query: 449 KVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCRP 508
           +VQD+++AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR   GD R 
Sbjct: 308 RVQDLTSAYAAAERLFDLSND-SQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFSGDRRS 367

Query: 509 FQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPGG 568
           +Q   GN+WRG N  N +NR   SCFICKG H   ECPN+ A  AFQA+LT+D   +   
Sbjct: 368 YQSNTGNSWRGSNNQNLSNRP-LSCFICKGPHMARECPNKTAFNAFQASLTSDSDNQQSQ 427

Query: 569 PETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET 612
            E +    +  DNPRMGALKFLS+LQKK  E   P+ERGLMYV+T
Sbjct: 428 TEGEVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470

[Close]

BLAST of Moc04g24920 vs. ExPASy TrEMBL
Match: A0A5A7TTJ4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G002260 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 8.3e-162
Identity = 295/465 (63.44%), Postives = 374/465 (80.43%), Query Frame = 0


Query: 149 GQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELMLR 208
           G+  + RLVE+EEQ+L+L E+PD++RY+ESRL+EIS K + ID V  R++G  I ELM R
Sbjct: 8   GKASKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPILELMTR 67

Query: 209 IETFEDKVK--RTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATIDE 268
           ++  E  V   RT N ERG+SS+ S+AH+EERV+E+D SQKT+++M++ ++++F+AT+D 
Sbjct: 68  VDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDV 127

Query: 269 MRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLEQ 328
           +R EIA++  +++LTMRA+ NQAPAGG I  ++VK+PEPKPFCGARDAKALEN+IFDLEQ
Sbjct: 128 VRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLEQ 187

Query: 329 YFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFPE 388
           YF+AT+TVTEE+KVTLATMHL++DAKLWWR+R+VD+QEG CTIDTW+ LK+ELRSQFFPE
Sbjct: 188 YFRATNTVTEEAKVTLATMHLSEDAKLWWRSRFVDIQEGHCTIDTWDALKRELRSQFFPE 247

Query: 389 NVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYEQ 448
           NVEILARRKLREL+HTG+IR+YVKQF+GLMLDIRDMSEKDKVF FVEGLKPWA+ KLYEQ
Sbjct: 248 NVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQ 307

Query: 449 KVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCRP 508
           +VQD+++AYATAERLFDLSN+ SQ+ R+  +SSS G+R  R  SPK  G DR   GD R 
Sbjct: 308 RVQDLTSAYATAERLFDLSNN-SQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFNGDRRS 367

Query: 509 FQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPGG 568
            Q   GN+WRGP+  N +NR   SCFICKG H   ECPN+ A  AFQA+LT+D   +   
Sbjct: 368 HQSNTGNSWRGPSNQNLSNRP-LSCFICKGPHMARECPNKTAFNAFQASLTSDLDNQQSQ 427

Query: 569 PETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET 612
            E +    +  DNPRMGALKFLS+LQKK  E   P+ERGLMYV+T
Sbjct: 428 TEREVDQIEEADNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470

[Close]

BLAST of Moc04g24920 vs. ExPASy TrEMBL
Match: A0A5D3BYE6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00260 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161
Identity = 294/466 (63.09%), Postives = 375/466 (80.47%), Query Frame = 0


Query: 148 VGQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELML 207
           +G+  + RLVE+EEQ+L+L E+PD++RY+ESRL+EIS K + ID V  R++G  I+ELM 
Sbjct: 7   LGKAQKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPIQELMT 66

Query: 208 RIETFEDKVK--RTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATID 267
           R++  E  V   RT N ERG+SS+ S+AH+EERV+E+D SQKT+++M++ ++++F+AT+D
Sbjct: 67  RVDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLD 126

Query: 268 EMRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLE 327
            +R EIA++  +++LTMRA+ NQAPAGG I  ++VK+PEPKPFCGARDAKALEN+IFDLE
Sbjct: 127 VVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLE 186

Query: 328 QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFP 387
           QYF+AT+TVTEE+KVTLATMHL++DAKLWWR+R+VD+QEG+CTIDTW+ LK+ELRSQFFP
Sbjct: 187 QYFRATNTVTEEAKVTLATMHLSEDAKLWWRSRFVDIQEGRCTIDTWDALKRELRSQFFP 246

Query: 388 ENVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE 447
           ENVEILARRKLREL+HTG+IR+YVKQF+GLMLDIRDMSEKDKVF FVEGLKPWA+ KLYE
Sbjct: 247 ENVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYE 306

Query: 448 QKVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCR 507
           Q+VQD+++AYA AERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR   GD R
Sbjct: 307 QRVQDLTSAYAAAERLFDLSND-SQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFSGDRR 366

Query: 508 PFQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPG 567
             Q   GN+WRG +  N +NR   SCFICKG H   ECPN+ A  AFQA+LT+D   +  
Sbjct: 367 SHQSNTGNSWRGSSNQNLSNRP-LSCFICKGPHMARECPNKTAFNAFQASLTSDSDNQQS 426

Query: 568 GPETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET 612
             E +    +  DNPRMGALKFLS+LQKK  E   P+ERGLMYV+T
Sbjct: 427 QTEGEVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470

[Close]

BLAST of Moc04g24920 vs. ExPASy TrEMBL
Match: A0A5A7T3M3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002020 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161
Identity = 295/466 (63.30%), Postives = 375/466 (80.47%), Query Frame = 0


Query: 148 VGQVPRRRLVEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLAIRELML 207
           +G+  + RLVE+EEQ+L+L E+PD++RY+ESRL+EIS K + ID V  R++G  I+ELM 
Sbjct: 7   LGKAQKDRLVELEEQMLYLVEVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPIQELMT 66

Query: 208 RIETFEDKVK--RTDNLERGESSSSSIAHMEERVEEIDISQKTIVQMVSELTDNFKATID 267
           R++  E  V   RT N ERG+SS+ S+AH+EERV+E+D SQKT ++M++ ++++F+AT+D
Sbjct: 67  RVDALETTVNIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTRLEMINGMSEDFRATLD 126

Query: 268 EMRAEIAELGTKVNLTMRAVGNQAPAGGPIQFNKVKVPEPKPFCGARDAKALENFIFDLE 327
            +R EIA++  +++LTMRA+ NQAPAGG I  ++VK+PEPKPFCGARDAKALEN+IFDLE
Sbjct: 127 VVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLE 186

Query: 328 QYFKATSTVTEESKVTLATMHLADDAKLWWRARYVDVQEGKCTIDTWEKLKQELRSQFFP 387
           QYF+AT+TVTEE+KVTLATMHL++DAKLWWR+R+VD+QEG+CTIDTW+ LK+ELRSQFFP
Sbjct: 187 QYFRATNTVTEEAKVTLATMHLSEDAKLWWRSRFVDIQEGRCTIDTWDALKRELRSQFFP 246

Query: 388 ENVEILARRKLRELRHTGNIRDYVKQFSGLMLDIRDMSEKDKVFAFVEGLKPWARAKLYE 447
           ENVEILARRKLREL+HTG+IR+YVKQF+GLMLDIRDMSEKDKVF FVEGLKPWA+ KLYE
Sbjct: 247 ENVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYE 306

Query: 448 QKVQDISTAYATAERLFDLSNDTSQEQRKTQASSSSGNRPARSGSPKNGGADRNGGGDCR 507
           Q+VQD+++AYATAERLFDLSND SQ+ R+  +SSS G+R  R  SPK  G DR   GD R
Sbjct: 307 QRVQDLTSAYATAERLFDLSND-SQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFNGDRR 366

Query: 508 PFQQRGGNTWRGPNPPNNNNRTGPSCFICKGLHRVYECPNRAALRAFQATLTNDRAIEPG 567
             Q   GN+WRG +  N +NR   SCFICKG H   ECPN+ A  AFQA+LT+D   +  
Sbjct: 367 SHQSNTGNSWRGSSNQNLSNRP-LSCFICKGPHMTRECPNKTAFNAFQASLTSDSDNQQS 426

Query: 568 GPETDTPPKDADDNPRMGALKFLSALQKKAEEVKEPLERGLMYVET 612
             E +    +  DNPRMGALKFLS+LQKK  E   P+ERGLMYV+T
Sbjct: 427 QTEGEVNQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDT 470

The following BLAST results are available for this feature:

BLAST of Moc04g24920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155185.1	5.8e-210	84.73	uncharacterized protein LOC111022320 [Momordica charantia]	[more]
KAA0032849.1	7.7e-162	63.23	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0045217.1	1.7e-161	63.44	uncharacterized protein E6C27_scaffold30G002260 [Cucumis melo var. makuwa]	[more]
KAA0037573.1	2.2e-161	63.30	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK03099.1	2.2e-161	63.09	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Moc04g24920 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g24920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLQ6	2.8e-210	84.73	uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5A7SUK4	3.7e-162	63.23	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81...	[more]
A0A5A7TTJ4	8.3e-162	63.44	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3BYE6	1.1e-161	63.09	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5A7T3M3	1.1e-161	63.30	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]

BLAST of Moc04g24920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 202..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..526
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 512..526
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 560..580
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 251..546
None	No IPR available	PANTHER	PTHR34482:SF18	RETROTRANSPOSON GAG DOMAIN, ASPARTIC PEPTIDASE DOMAIN PROTEIN-RELATED	coord: 251..546
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 342..437 e-value: 6.7E-18 score: 64.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g24920.1	Moc04g24920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding