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Moc04g24870 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATGATTCAAATGTGTGGCTTATCGTGTAATGAAAAAGGGGATATACAAGTTCATAGCCTCGTGGGCAATGGTCGAGGCGGTTACGTCACTACTGGGTGTCGAGGCTTCGAGAGCAAAAGGCCGGGGGTCAACAGACCAGTCTTGGTAGAGATGAGTGTCGAGGCTCCGGGTACAAAGGATCGGGGGTCGGCATGATGAGTCTATTTGATGATGAGTATTGGGTCTAGATGGGTGGCGGTCAAGGACCAATACGTTGAGTAGTCGTCGGGGCCTTGGAGATAAATGTCAAGGGCCGATGCACCGTTTAAGGCCTTGGGATAAATGACAAGGTCGAACACCAAGTTTTCGTAGAGGAGTGTCGAGGTCTTGGGGATAAATGTCAAGGGCCGATATGACTCGAGGAGTTAGACTTGGAGGACTAACATGGAGTGGTGGTTATGAGCAACAATTCAAGACCTTGGGGATAAATGGCAAGGTCGAACGCCGAACTTCTGTAGAGGGATGTCGGTACCTTGGGGATAAATGTCAATGGCCGATACGCTTGTAAAGTTAGACTTGAAGTACTAACTCAGGGTGTAGAGCGAGTAGTGGCTCGAGGGAGTTAGAGGCTAGTGGGCCGTGTGATCGAAGCCACGAGAGTCCTGGCATTTGGATGTGTGGTGGAAATTGTTGGAGATGAAAATTTCCTACTATAGAAATTTCAAGTTCTTGTATCACTAGAAGGAAATGGTCTAGAATCATATATTGATGAAGATGCAGAGATACCACCAAAGTTCTTAACCGTTACAGAAGGCACCGCCATTACACAAAAATCAAATGCTACATATCATCACTGGAAACGGCAAGATTGCCTAATTACATCATTGCTTTTAAGCTCAATGTCTGAGGACATTCTTGTAGACTTTCTTCACTGTCAAACTGCCAAAGAAATCTGGAGTAATCTTGAACAAATGTTCGCATCCAAAAATCTTGCCAAGGTACTACAATTGAGAACCAAACTTCTGAATTTCATAAAAGGGAGTCTGACTTTAAAAGTTTACATTAGAATATCAAAATACTGGTCGATTCTTTAAAAGCAACGAGTAAAATAATCACACCAGACGATCATATTCTGCATATTCTATCTGGTCTTGGTGTTGAATATGAGTCCACAATAGCTGTAATCATAGTGAAAACACCTCCTCTAACAATTCAAGAAGTCTCTTCACTTCTTTTTATCAAATGAGAGCAAAATTGAGAAAGAATCTATAACTTCAACATCGAAGGATACTTATTTACCATCTGTAAATCTAGTACATCAACCAAATCAGTCATTGTCTTTGAATGACACTGCAAGAACACAGCATACCTATGATAACAGTAGAGGAAGAGGCAGAAATTACAGAGGTGGTGGTAGACAGTGGAATTCAAGAAACAAAGTTCAATGTCAAATCTGTCACAGATGTGGCCATATAGCAGATCGATGTTATTTTCAAATGACCAACTCAGTTTATCACTCAAATAACTTGACTAGTCAATCATCTTTTACTCAACAATAGAACCAGTTCAATCCACAAACACAAATGTCAACAATGTTAGTAACACCTGACCTAAAAAAGAATACAAATTGGTATCCAGATTCAAGAGCAACAAACCATATCACTCATGATCTTGGAAACTTGACAATTAGCAATGAGATGACAAAAGGATAGTAAGTACATACAACAAATGAAGCAGGTTTGAACATCTCTCACTTTGGTTATTCCACCCTTACTACTTCATATAACCATGTCTTTCATCTACAAAACTTATTACATGTATCATATGTTACCAAAAATCTTCTAAGCGTTAGCCAATTTGCTAAAGATAACAACGTTTTCTTTGAATTTCATCCATCTTTTTATTTTGTTAAGGATCAAGCTACTGGAACTATCCTCCTCCAAGGGACTCTTCATGAAGGATTATATACACCTTTAGGTTGAATGCATCATCCTTTGCTATTCCTCAATCCCCATACTCTCTAGTTTGTAACTCTGTCATTTCATTTTGTAATTCTTCTATTGATATATGGCACAGAAGATTAGGCAATCCAACTTTAAACATCGTTACTCATATTCTCAAAACTTTTACTCCACATTTCCCTAAGAATAAAAAGATATATTTTTATCATGCTTGTGCCATTGGAAAACACCATTTTCTTCCTTTCTCTCCCTCACTAACTACATTGTCCCTCTTCAATTAGTAGTCTCTGATCTTTGGGGTCCAGCATATAAATCTTCTAGAAATGACTATAAATACTATATAAGCTTCATTTATGCTTTCTCCCGTTTTTCATGGATTTATTTTCTTGAAACTAAGTCTTAGGCCGTCTCTGCATTGCTCCAATTTAAAACTCATGTAGAAAAACTCTTGGGAGTCCCCTTCAATCTGATGATGGGGGAATGCAAAAAGCTTACTCCATACCTCAAAGCCTCCATACCTCAAAGCCAATGACATTGAACATCGATTTTTATGTCCTTACACGTCCCAACAGAATGGGATTGCAGAACGCAAACACCGTCACATTGTTGACATAAGCCTCGCTATTCTATCTCATTCTTCCATTCCTTTACCTTTCTGAGATGATGCATTCTCAACCTATGTCTACTTAATAAATAGATTATCATCTCCTAGTCTCAATTGGATCAGTCTCTTGGAAAAACTATTTCATCAAACTTCAAACTTTTCTTTCCTAAAGAACTTTGGCTGTCTCTACTACCCTTGTTTAAGACCTTATAACAACCATAAGTTTCAGCCTCGATCCATTCCCTGTACCTTCTTAGGCTATAGCAATATCCATAAAGGTTACAAATGCCTTTCTTCCGATGGTTGTTTATATTTCTCTCGACATGTCCTTTTTGACGAGTCTACTTTCCCCTTTAGCAAATCAGTTTCTTCTACATCCTCATCAACTCCCCCTAATCTTGTTACTTCAACTTTATCTTTTTCTCCCAGCTTTCCATCTGTATCTCTTCTATTACCTACCCTCAAACTTCTCCAACAAACTTATACTATACTGATACTCCACATTCAATATCTCCTATCTTACCATCCCAATCAAACATCCTCCCAAACCAACCCTCAGGTTCTTCGGTTGAAACTGCTTCTCAAATAGGTACCTCTGCTGCTCCTACACAAATTGCTCTTACTTATCCTACATCAAGTACCACTACTACTCCTACAATAGATACTTTGGTTGAGTCTTCATCTTCTGAACAGCAGGATGTTCCTTAG ATGGCTATGATTCAAATGTGTGGCTTATCGTGTAATGAAAAAGGGGATATACAAGTTCATAGCCTCGTGGGCAATGGTCGAGGCGGTTACGTCACTACTGGGTGTCGAGGCTTCGAGAGCAAAAGGCCGGGGGTCAACAGACCAGTCTTGGTAGAGATGAGTGTCGAGGCTCCGGAAGGAAATGGTCTAGAATCATATATTGATGAAGATGCAGAGATACCACCAAAGTTCTTAACCGTTACAGAAGGCACCGCCATTACACAAAAATCAAATGCTACATATCATCACTGGAAACGGCAAGATTGCCTAATTACATCATTGCTTTTAAGCTCAATGTCTGAGGACATTCTTGTAGACTTTCTTCACTGTCAAACTGCCAAAGAAATCTGGAGTAATCTTGAACAAATGTTCGCATCCAAAAATCTTGCCAAGCTTTCCATCTGTATCTCTTCTATTACCTACCCTCAAACTTCTCCAACAAACTTATACTATACTGATACTCCACATTCAATATCTCCTATCTTACCATCCCAATCAAACATCCTCCCAAACCAACCCTCAGGTTCTTCGGTTGAAACTGCTTCTCAAATAGGTACCTCTGCTGCTCCTACACAAATTGCTCTTACTTATCCTACATCAAGTACCACTACTACTCCTACAATAGATACTTTGGTTGAGTCTTCATCTTCTGAACAGCAGGATGTTCCTTAG ATGGCTATGATTCAAATGTGTGGCTTATCGTGTAATGAAAAAGGGGATATACAAGTTCATAGCCTCGTGGGCAATGGTCGAGGCGGTTACGTCACTACTGGGTGTCGAGGCTTCGAGAGCAAAAGGCCGGGGGTCAACAGACCAGTCTTGGTAGAGATGAGTGTCGAGGCTCCGGAAGGAAATGGTCTAGAATCATATATTGATGAAGATGCAGAGATACCACCAAAGTTCTTAACCGTTACAGAAGGCACCGCCATTACACAAAAATCAAATGCTACATATCATCACTGGAAACGGCAAGATTGCCTAATTACATCATTGCTTTTAAGCTCAATGTCTGAGGACATTCTTGTAGACTTTCTTCACTGTCAAACTGCCAAAGAAATCTGGAGTAATCTTGAACAAATGTTCGCATCCAAAAATCTTGCCAAGCTTTCCATCTGTATCTCTTCTATTACCTACCCTCAAACTTCTCCAACAAACTTATACTATACTGATACTCCACATTCAATATCTCCTATCTTACCATCCCAATCAAACATCCTCCCAAACCAACCCTCAGGTTCTTCGGTTGAAACTGCTTCTCAAATAGGTACCTCTGCTGCTCCTACACAAATTGCTCTTACTTATCCTACATCAAGTACCACTACTACTCCTACAATAGATACTTTGGTTGAGTCTTCATCTTCTGAACAGCAGGATGTTCCTTAG MAMIQMCGLSCNEKGDIQVHSLVGNGRGGYVTTGCRGFESKRPGVNRPVLVEMSVEAPEGNGLESYIDEDAEIPPKFLTVTEGTAITQKSNATYHHWKRQDCLITSLLLSSMSEDILVDFLHCQTAKEIWSNLEQMFASKNLAKLSICISSITYPQTSPTNLYYTDTPHSISPILPSQSNILPNQPSGSSVETASQIGTSAAPTQIALTYPTSSTTTTPTIDTLVESSSSEQQDVP Homology
BLAST of Moc04g24870 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia]) HSP 1 Score: 87.0 bits (214), Expect = 2.3e-13 Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 0
BLAST of Moc04g24870 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia]) HSP 1 Score: 85.5 bits (210), Expect = 6.7e-13 Identity = 43/91 (47.25%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of Moc04g24870 vs. NCBI nr
Match: KAA0067213.1 (keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 81.6 bits (200), Expect = 9.7e-12 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of Moc04g24870 vs. NCBI nr
Match: TYK18917.1 (keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 81.6 bits (200), Expect = 9.7e-12 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of Moc04g24870 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 2.2e-11 Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of Moc04g24870 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04 Identity = 26/81 (32.10%), Postives = 40/81 (49.38%), Query Frame = 0
BLAST of Moc04g24870 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 3.5e-04 Identity = 25/81 (30.86%), Postives = 40/81 (49.38%), Query Frame = 0
BLAST of Moc04g24870 vs. ExPASy TrEMBL
Match: A0A6J1DSS1 (uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023586 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.1e-13 Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 0
BLAST of Moc04g24870 vs. ExPASy TrEMBL
Match: A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 3.2e-13 Identity = 43/91 (47.25%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of Moc04g24870 vs. ExPASy TrEMBL
Match: A0A5D3D5T2 (Keratin, type II cytoskeletal 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001330 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.7e-12 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of Moc04g24870 vs. ExPASy TrEMBL
Match: A0A5A7VGJ8 (Keratin, type II cytoskeletal 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00160 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.7e-12 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of Moc04g24870 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.0e-11 Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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