Moc04g24490 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g24490
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr4: 17714592 .. 17715148 (-)
RNA-Seq Expression	Moc04g24490
Synteny	Moc04g24490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCGGCTATGCCTTACTCCATCTCGACCTGGAAGCAACTACAGAAGACCTCCATGGCCCAGTTCGCGGCACATAGGGATGTCAAGCACACATATACTTACCCCTTCTCCACTCGCCAGAAGCCAAAAGAGCCTATTCGAGATTACATCAAAGGGTTTTTGGTCGAGCAAATCAAGGTGGAGAATTGTACTGACTTGCTCGCTCGTACCACATTTTGTAACGGGGTGACCTATTAGAAGTTAACTTGGTCACTCGCAAAGAAACCTAAACCCACCTTGAGGGCCTGCCTCGATTGAGCTACAAAGTTTATCAAGGGTGAAGACATCATATTGTCAAAGACCACAAGTATTCCAAACGCGGTTCTCCGCCCAAATCAAATGATAAAGATAAAGCTAAGAAAGATGAGAAAATGGAGAGGTCCAAGACCCCTCCAAAGCATGAGAATCAACTTTCAGTGATCAATACTATTCAAAGTGGGCCTAATGAGGGCCAGTCAGGCCACAAATGCAAAAAGCTAGCTCGAGAAGCTAGGCATGAGATCTACTCGCTGTAG

mRNA sequence

ATGGTTTCGGCTATGCCTTACTCCATCTCGACCTGGAAGCAACTACAGAAGACCTCCATGGCCCAGTTCGCGGCACATAGGGATGTCAAGCACACATATACTTACCCCTTCTCCACTCGCCAGAAGCCAAAAGAGCCTATTCGAGATTACATCAAAGGGTTTTTGGTCGAGCAAATCAAGGTGGAGAATTGTACTGACTTGCTCGCTCGTACCACATTTTGTAACGGGTATTCCAAACGCGGTTCTCCGCCCAAATCAAATGATAAAGATAAAGCTAAGAAAGATGAGAAAATGGAGAGGTCCAAGACCCCTCCAAAGCATGAGAATCAACTTTCAGTGATCAATACTATTCAAAGTGGGCCTAATGAGGGCCAGTCAGGCCACAAATGCAAAAAGCTAGCTCGAGAAGCTAGGCATGAGATCTACTCGCTGTAG

Coding sequence (CDS)

ATGGTTTCGGCTATGCCTTACTCCATCTCGACCTGGAAGCAACTACAGAAGACCTCCATGGCCCAGTTCGCGGCACATAGGGATGTCAAGCACACATATACTTACCCCTTCTCCACTCGCCAGAAGCCAAAAGAGCCTATTCGAGATTACATCAAAGGGTTTTTGGTCGAGCAAATCAAGGTGGAGAATTGTACTGACTTGCTCGCTCGTACCACATTTTGTAACGGGTATTCCAAACGCGGTTCTCCGCCCAAATCAAATGATAAAGATAAAGCTAAGAAAGATGAGAAAATGGAGAGGTCCAAGACCCCTCCAAAGCATGAGAATCAACTTTCAGTGATCAATACTATTCAAAGTGGGCCTAATGAGGGCCAGTCAGGCCACAAATGCAAAAAGCTAGCTCGAGAAGCTAGGCATGAGATCTACTCGCTGTAG

Protein sequence

MVSAMPYSISTWKQLQKTSMAQFAAHRDVKHTYTYPFSTRQKPKEPIRDYIKGFLVEQIKVENCTDLLARTTFCNGYSKRGSPPKSNDKDKAKKDEKMERSKTPPKHENQLSVINTIQSGPNEGQSGHKCKKLAREARHEIYSL

Homology

[Close]

BLAST of Moc04g24490 vs. NCBI nr
Match: XP_022149836.1 (uncharacterized protein LOC111018172 [Momordica charantia])

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-18
Identity = 80/219 (36.53%), Postives = 97/219 (44.29%), Query Frame = 0


Query: 7   YSISTWKQLQKTSMAQFAAHRDVKHTYTYPFSTRQKPKEPIRDYIKGFLVEQIKVENCTD 66
           YSIS+ KQL+K  +AQFAAH+D KH+ T              DYIK FL EQIKVE CTD
Sbjct: 172 YSISSLKQLRKAFIAQFAAHKDAKHSDT--------------DYIKRFLSEQIKVETCTD 231

Query: 67  LLARTTFCNG-----------------------------------------YSKRGSPPK 126
           LLAR+ FCNG                                         YS+ GSP K
Sbjct: 232 LLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEAEDIMMSKEDKYSRNGSPSK 291

Query: 127 -SNDKDKAK---------------------------------------KDEKMERSKTPP 145
              +KDK K                                       K++K ERSKT P
Sbjct: 292 IEKNKDKKKNGNGGNGRGNSFCLIRQGYFKKYVGKRDREETSNPSSSRKEQKRERSKTLP 351

[Close]

BLAST of Moc04g24490 vs. NCBI nr
Match: XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 8.8e-08
Identity = 57/200 (28.50%), Postives = 89/200 (44.50%), Query Frame = 0


Query: 8   SISTWKQLQKTSMAQFAAHRDVKHTYTYPFSTRQKPKEPIRDYIKGFLVEQIKVENCTDL 67
           SIST+ QL+K  ++QF +    + T T+  + RQK  + +++YI  F  EQ+KV +C+D 
Sbjct: 210 SISTYSQLRKEFISQFFSRHYDRKTTTHLATIRQKEGKTLKEYITRFQEEQLKVVHCSDD 269

Query: 68  LARTTFCNGYS------------------------------------------------- 127
            +   F  G +                                                 
Sbjct: 270 SSMCYFLTGLADETPTVKLGEEALATFAEVLQMEKKFIDGQELLRTKTDRPEKQIDQKKS 329

Query: 128 ---KRGSPPKSNDK--------------DKAKKDEKMERSKTPPKHENQLSVINTIQSGP 142
              KR +  KS DK              +  +K E+ +RS+TPP+ +++ +VINTI  GP
Sbjct: 330 SQDKRKADSKSKDKGSSSSNSRTDYCRSNSVEKKEERKRSRTPPRLDDRPAVINTIFGGP 389

[Close]

BLAST of Moc04g24490 vs. NCBI nr
Match: XP_022157676.1 (uncharacterized protein LOC111024332 [Momordica charantia])

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-05
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 80  RGSPP-KSNDK-DKAKKDEKMERSKTPPKHENQLSVINTIQSGPNEGQSGHKCKKLAREA 139
           RG+P  +S DK   A+K E+ +RS+TPP+  ++ +VINTI  GP+ GQSGHK K+LAREA
Sbjct: 120 RGAPERRSKDKTSSAEKKEERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKELAREA 179

Query: 140 RHEI 142
           R E+
Sbjct: 180 RREV 183

[Close]

BLAST of Moc04g24490 vs. NCBI nr
Match: XP_022143561.1 (uncharacterized protein LOC111013429 [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-05
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 75  NGYSKR-GSPPKSNDKDKAKKDEKMERSKTPPKHENQLSVINTIQSGPNEGQSGHKCKKL 134
           +GY K+    P+SN     +K E+ +RS+TPP+ E+Q +VINTI  GPN GQSG+K K+L
Sbjct: 50  DGYFKKFVGKPRSN---SVEKKEERKRSRTPPRREDQPAVINTISGGPNGGQSGNKRKEL 109

Query: 135 AREARHEI 142
           AR+AR E+
Sbjct: 110 ARKARCEV 114

[Close]

BLAST of Moc04g24490 vs. NCBI nr
Match: XP_022158414.1 (uncharacterized protein LOC111024904 [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-05
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 75  NGYSKR-GSPPKSNDKDKAKKDEKMERSKTPPKHENQLSVINTIQSGPNEGQSGHKCKKL 134
           +GY K+    P+SN     +K E+ +RS+TPP+ E++ +VINTI  GPN GQSG+K K+L
Sbjct: 262 DGYFKKFVGKPRSN---SVEKKEERKRSRTPPRREDRPAVINTIFGGPNGGQSGNKRKEL 321

Query: 135 AREARHEI 142
           AREAR E+
Sbjct: 322 AREARREV 326

[Close]

BLAST of Moc04g24490 vs. ExPASy TrEMBL
Match: A0A6J1D9M1 (uncharacterized protein LOC111018172 OS=Momordica charantia OX=3673 GN=LOC111018172 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18
Identity = 80/219 (36.53%), Postives = 97/219 (44.29%), Query Frame = 0


Query: 7   YSISTWKQLQKTSMAQFAAHRDVKHTYTYPFSTRQKPKEPIRDYIKGFLVEQIKVENCTD 66
           YSIS+ KQL+K  +AQFAAH+D KH+ T              DYIK FL EQIKVE CTD
Sbjct: 172 YSISSLKQLRKAFIAQFAAHKDAKHSDT--------------DYIKRFLSEQIKVETCTD 231

Query: 67  LLARTTFCNG-----------------------------------------YSKRGSPPK 126
           LLAR+ FCNG                                         YS+ GSP K
Sbjct: 232 LLARSAFCNGVTHEKLSWSLAKKPELTLKGCLDRATKFIEAEDIMMSKEDKYSRNGSPSK 291

Query: 127 -SNDKDKAK---------------------------------------KDEKMERSKTPP 145
              +KDK K                                       K++K ERSKT P
Sbjct: 292 IEKNKDKKKNGNGGNGRGNSFCLIRQGYFKKYVGKRDREETSNPSSSRKEQKRERSKTLP 351

[Close]

BLAST of Moc04g24490 vs. ExPASy TrEMBL
Match: A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.3e-08
Identity = 57/200 (28.50%), Postives = 89/200 (44.50%), Query Frame = 0


Query: 8   SISTWKQLQKTSMAQFAAHRDVKHTYTYPFSTRQKPKEPIRDYIKGFLVEQIKVENCTDL 67
           SIST+ QL+K  ++QF +    + T T+  + RQK  + +++YI  F  EQ+KV +C+D 
Sbjct: 210 SISTYSQLRKEFISQFFSRHYDRKTTTHLATIRQKEGKTLKEYITRFQEEQLKVVHCSDD 269

Query: 68  LARTTFCNGYS------------------------------------------------- 127
            +   F  G +                                                 
Sbjct: 270 SSMCYFLTGLADETPTVKLGEEALATFAEVLQMEKKFIDGQELLRTKTDRPEKQIDQKKS 329

Query: 128 ---KRGSPPKSNDK--------------DKAKKDEKMERSKTPPKHENQLSVINTIQSGP 142
              KR +  KS DK              +  +K E+ +RS+TPP+ +++ +VINTI  GP
Sbjct: 330 SQDKRKADSKSKDKGSSSSNSRTDYCRSNSVEKKEERKRSRTPPRLDDRPAVINTIFGGP 389

[Close]

BLAST of Moc04g24490 vs. ExPASy TrEMBL
Match: A0A6J1DYW5 (uncharacterized protein LOC111024332 OS=Momordica charantia OX=3673 GN=LOC111024332 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-05
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 80  RGSPP-KSNDK-DKAKKDEKMERSKTPPKHENQLSVINTIQSGPNEGQSGHKCKKLAREA 139
           RG+P  +S DK   A+K E+ +RS+TPP+  ++ +VINTI  GP+ GQSGHK K+LAREA
Sbjct: 120 RGAPERRSKDKTSSAEKKEERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKELAREA 179

Query: 140 RHEI 142
           R E+
Sbjct: 180 RREV 183

[Close]

BLAST of Moc04g24490 vs. ExPASy TrEMBL
Match: A0A6J1DZB9 (uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024904 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.5e-05
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 75  NGYSKR-GSPPKSNDKDKAKKDEKMERSKTPPKHENQLSVINTIQSGPNEGQSGHKCKKL 134
           +GY K+    P+SN     +K E+ +RS+TPP+ E++ +VINTI  GPN GQSG+K K+L
Sbjct: 262 DGYFKKFVGKPRSN---SVEKKEERKRSRTPPRREDRPAVINTIFGGPNGGQSGNKRKEL 321

Query: 135 AREARHEI 142
           AREAR E+
Sbjct: 322 AREARREV 326

[Close]

BLAST of Moc04g24490 vs. ExPASy TrEMBL
Match: A0A6J1DZB9 (uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024904 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.3e-01
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 8   SISTWKQLQKTSMAQFAAHRDVKHTYTYPFSTRQKPKEPIRDYIKGFLVEQIKVENCTDL 67
           SIST+ QL+K  ++QF++    + T T+  + RQK +E +R+Y+  F  EQ+KV +C+D 
Sbjct: 34  SISTYSQLRKEFISQFSSWHYDRKTATHLATIRQKERETLREYVTRFQEEQLKVAHCSDD 93

Query: 68  LARTTFCNGYSKRGSPPKSNDKDKAKKDEKMERSK 103
            A   F    +      K  ++      E ++++K
Sbjct: 94  SAMCYFLTSLADETLTVKLGEEAPTTFVEVLQKAK 128

HSP 2 Score: 59.3 bits (142), Expect = 1.5e-05
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 75  NGYSKR-GSPPKSNDKDKAKKDEKMERSKTPPKHENQLSVINTIQSGPNEGQSGHKCKKL 134
           +GY K+    P+SN     +K E+ +RS+TPP+ E+Q +VINTI  GPN GQSG+K K+L
Sbjct: 50  DGYFKKFVGKPRSN---SVEKKEERKRSRTPPRREDQPAVINTISGGPNGGQSGNKRKEL 109

Query: 135 AREARHEI 142
           AR+AR E+
Sbjct: 110 ARKARCEV 114

The following BLAST results are available for this feature:

BLAST of Moc04g24490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149836.1	2.5e-18	36.53	uncharacterized protein LOC111018172 [Momordica charantia]	[more]
XP_022156088.1	8.8e-08	28.50	uncharacterized protein LOC111023060 [Momordica charantia]	[more]
XP_022157676.1	2.4e-05	54.69	uncharacterized protein LOC111024332 [Momordica charantia]	[more]
XP_022143561.1	3.1e-05	51.47	uncharacterized protein LOC111013429 [Momordica charantia]	[more]
XP_022158414.1	3.1e-05	51.47	uncharacterized protein LOC111024904 [Momordica charantia]	[more]

Pages

BLAST of Moc04g24490 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g24490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9M1	1.2e-18	36.53	uncharacterized protein LOC111018172 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DPN4	4.3e-08	28.50	uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DYW5	1.2e-05	54.69	uncharacterized protein LOC111024332 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DZB9	1.5e-05	51.47	uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DZB9	1.3e-01	30.53	uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Moc04g24490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g24490.1	Moc04g24490.1	mRNA