Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACACCGAAGGTTCTTCCTCCTCAAATCTCAATACCCTAAATGCAATGCCAATAGCCACTGCAATTAACAACACCATATCGTCAAATCCCTTTGGCAACCCACTTAGTACAGTATTGGCAGTCAAGTTGGATGAAAAGAATTATCTTCTCTGGAAATCCATGATTACTGCTGCTCTTCATGGACAGAAGCTTGATGGCTACGTTATGGGAACAATTGCTCAACCTCCAGAAATGATTCAAGGTACCGGTGCAAATGCCACCACACTCATTTCAAATCCTGCGTTTGATTCATGGTCTACCACAGATCAATCGCTCCTAGCCTGGTTGTATGGATCCATAACGCCATCTGTTGCTTGTGACATCCTCAATCTACGCACATCTAGAGATGTATGGAAAGCACTAGAAGATCTCTATGGAGCAACAAACAAGGCCCGAATCACCCAACTGAAAAGAAACCTTCAAATGACGAGGAAAAATCAGTTGAAAATGAGCGAATATCTTTCAACAATGAAGCAACTCGCTCACAGTCTTGCTCTAGCAGGCGAACCGGTAAGTGAAAATTCTCTCATCACTAATGTTCTCACGGATCTTGATGCAGAATATTTACCGGTAGCTTGCCAAATCAATGGAAAAGAAAATATGACATGGCAAGAGATGCATGCCACGTTGCTAGCTTTTGAAAACACACTCATTCATCTGAATGTGGTAACCAACAACATTGATGTCACAAATGCATCAGCCAACTATGCCTCAAATAGGAGCTTTAATCAAAGAGGAAGGTCTCACTACCAAAATCAAAATCGCGGACAAGGAAGAAATCAAAGAGGAAACAACCGTGGCAGAGGAGGCCAGAACACATACCAAAGAGGAAACTCCAAACCAACCTGCCAAGTTTGTGGAAAATTTGGGCACTCTGCTGCAATTTGCTACCATAGACTTGATGAAAATTACATCGGCAGCACACCACAAGCAAACAACAAGGCTCCGGGAGCTTTTATGGCAACCCCAAATGTTGTGAATGACCAAAATTGGCTTATGGATAGTGGGGCAACCAACCACACTACAAATGATGTCACCTACCTTGGACAAAAAGATGAGTACAATGGTAATGAAATGTTGACAGTAGGTAATGGTTCTAAGTTACCAATTACTCATGTTGGATTTACTATTGTTAAATCAAAGTCTCAAAATAACTTGAGTTTAAACTTGAAAAATATGTTGCTGGTTCCACACATCAAAATAAATCTTCTAAGTATCTCTCAATTGACTGCAGACAATCATGTAATTGTTGTTTTTGACTCAAATTGTTGTTGTGTTAAGGACAAGCAATCCGGGAGAACCATACTGGAGGGGAGGCTTAGTGAAGGACTCTATCAGCTGGATCTTCCAAAGCCTAAAGCACATTTTTCTGCTTCAAATAAAGCTGTCAATTTTCGTCCAAGTCAGTTAAATTCTTATCCAAATAATTTTGTCCTATTGAGTCCTAATGTCAATGCTGTCAAAAAATTCACATCTTTGAGCAATCTTTGGCATCAAAGATTAGGCCATTTGTCTGATAAAGTTTTGAATCTCGTGTCAAAGTCTTGTGATCCAAAATTTTCTTTCAATGAAAACAGAAATTTTTGTGATGCATGTCAATATGGCAAATCACATATATTACCCTTCAATAAGTCAAAATCTCATACATTAACTCCACTTGAACTCATACATTGTGATCTTTGGGGACCATCACCAATTCCATCCACCACAGGCTACAGATTTTACATTAGCTTCGTAGATGATTTCACTCGCCTAACTTCTATTTTTCCTCTTAAACAAAAATCTGATGCATTGGTAGCTTTCAAACAATATCACAAATTGATAGAAAATAAGTTTGAAAGAAAGATCAAAACCCTTCAAACTGATTGGGGAGGGGAGTTTCGAACCTTTGTTCCATATCTTAAAGAAATTGGAGTTGAATTTAGACATCCATGCCCTCACACCAGTCAACAAAATGGGATTGTTGAGAGAAAACATAGGCACATAGTGGAAATGGGTTTAACACTCCTTGCTCAAGCATCCATGCCCTTACGATATTGGTGGGACGCTTTCTATTCAGCCACCTACATCATAAATCGACTTCCCACTCCTATCCTAAATAACATCTCACGTTGGGAAAAAGCTTACAAAATTGCACCAGACTACAACTTCTTTAAAGTCTTTGGGTGTGCATGTTTTCCTTGCCTAAGACCATACGAAACTCACAAATTTCAATTTCACTCAACCAAATGTGTGTTCTTAGGTTATAGTGACATTCATAAAGGCTACAAATGTTTGAGTTCAAGTGGAAGATTGTATATTTCTAGGAGTGTTATCTTCAATGAGTCCGAGTTTCCCTTTCAAACTGGCTTCTTCAAAACAATCTCCCCAAATGAGAGCCCTTGTGAAACAGTTATCACTTTGATGAATTTCCCAAGTCATTTGATCAGTCCTCAAAATCCATCATCCACAAATCATACTTTACTTCCACAAATGAGTCAAACAAGTCACTCCAATCCAGTTGGTACAGTCACAAAGTTAGCAACTCCTGCAGAACAAAGTTCTCCCTCAAAGTCTGTAAGTCAACAAGAAAATTTGGTTGTTAATTCTACTGCCGCTACTAATGTTTGTGGAAATGGTATAGCTTGCTTTGATGTTGAAGATCTTGGACTATCAAGTTGTGAAATGGTATAG
mRNA sequence
ATGGACACCGAAGGTTCTTCCTCCTCAAATCTCAATACCCTAAATGCAATGCCAATAGCCACTGCAATTAACAACACCATATCGTCAAATCCCTTTGGCAACCCACTTAGTACAGTATTGGCAGTCAAGTTGGATGAAAAGAATTATCTTCTCTGGAAATCCATGATTACTGCTGCTCTTCATGGACAGAAGCTTGATGGCTACGTTATGGGAACAATTGCTCAACCTCCAGAAATGATTCAAGGTACCGGTGCAAATGCCACCACACTCATTTCAAATCCTGCGTTTGATTCATGGTCTACCACAGATCAATCGCTCCTAGCCTGGTTGTATGGATCCATAACGCCATCTGTTGCTTGTGACATCCTCAATCTACGCACATCTAGAGATGTATGGAAAGCACTAGAAGATCTCTATGGAGCAACAAACAAGGCCCGAATCACCCAACTGAAAAGAAACCTTCAAATGACGAGGAAAAATCAGTTGAAAATGAGCGAATATCTTTCAACAATGAAGCAACTCGCTCACAGTCTTGCTCTAGCAGGCGAACCGGTAAGTGAAAATTCTCTCATCACTAATGTTCTCACGGATCTTGATGCAGAATATTTACCGGTAGCTTGCCAAATCAATGGAAAAGAAAATATGACATGGCAAGAGATGCATGCCACGTTGCTAGCTTTTGAAAACACACTCATTCATCTGAATGTGGTAACCAACAACATTGATGTCACAAATGCATCAGCCAACTATGCCTCAAATAGGAGCTTTAATCAAAGAGGAAGCACACCACAAGCAAACAACAAGGCTCCGGGAGCTTTTATGGCAACCCCAAATGTTGTGAATGACCAAAATTGGCTTATGGATAGTGGGGCAACCAACCACACTACAAATGATGTCACCTACCTTGGACAAAAAGATGAGTACAATGGTAATGAAATGTTGACAGACAAGCAATCCGGGAGAACCATACTGGAGGGGAGGCTTAGTGAAGGACTCTATCAGCTGGATCTTCCAAAGCCTAAAGCACATTTTTCTGCTTCAAATAAAGCTGTCAATTTTCGTCCAAGTCATCCTCAAAATCCATCATCCACAAATCATACTTTACTTCCACAAATGAGTCAAACAAGTCACTCCAATCCAGTTGGTACAGTCACAAAGTTAGCAACTCCTGCAGAACAAAGTTCTCCCTCAAAGTCTGTAAGTCAACAAGAAAATTTGGTTGTTAATTCTACTGCCGCTACTAATGTTTGTGGAAATGGTATAGCTTGCTTTGATGTTGAAGATCTTGGACTATCAAGTTGTGAAATGGTATAG
Coding sequence (CDS)
ATGGACACCGAAGGTTCTTCCTCCTCAAATCTCAATACCCTAAATGCAATGCCAATAGCCACTGCAATTAACAACACCATATCGTCAAATCCCTTTGGCAACCCACTTAGTACAGTATTGGCAGTCAAGTTGGATGAAAAGAATTATCTTCTCTGGAAATCCATGATTACTGCTGCTCTTCATGGACAGAAGCTTGATGGCTACGTTATGGGAACAATTGCTCAACCTCCAGAAATGATTCAAGGTACCGGTGCAAATGCCACCACACTCATTTCAAATCCTGCGTTTGATTCATGGTCTACCACAGATCAATCGCTCCTAGCCTGGTTGTATGGATCCATAACGCCATCTGTTGCTTGTGACATCCTCAATCTACGCACATCTAGAGATGTATGGAAAGCACTAGAAGATCTCTATGGAGCAACAAACAAGGCCCGAATCACCCAACTGAAAAGAAACCTTCAAATGACGAGGAAAAATCAGTTGAAAATGAGCGAATATCTTTCAACAATGAAGCAACTCGCTCACAGTCTTGCTCTAGCAGGCGAACCGGTAAGTGAAAATTCTCTCATCACTAATGTTCTCACGGATCTTGATGCAGAATATTTACCGGTAGCTTGCCAAATCAATGGAAAAGAAAATATGACATGGCAAGAGATGCATGCCACGTTGCTAGCTTTTGAAAACACACTCATTCATCTGAATGTGGTAACCAACAACATTGATGTCACAAATGCATCAGCCAACTATGCCTCAAATAGGAGCTTTAATCAAAGAGGAAGCACACCACAAGCAAACAACAAGGCTCCGGGAGCTTTTATGGCAACCCCAAATGTTGTGAATGACCAAAATTGGCTTATGGATAGTGGGGCAACCAACCACACTACAAATGATGTCACCTACCTTGGACAAAAAGATGAGTACAATGGTAATGAAATGTTGACAGACAAGCAATCCGGGAGAACCATACTGGAGGGGAGGCTTAGTGAAGGACTCTATCAGCTGGATCTTCCAAAGCCTAAAGCACATTTTTCTGCTTCAAATAAAGCTGTCAATTTTCGTCCAAGTCATCCTCAAAATCCATCATCCACAAATCATACTTTACTTCCACAAATGAGTCAAACAAGTCACTCCAATCCAGTTGGTACAGTCACAAAGTTAGCAACTCCTGCAGAACAAAGTTCTCCCTCAAAGTCTGTAAGTCAACAAGAAAATTTGGTTGTTAATTCTACTGCCGCTACTAATGTTTGTGGAAATGGTATAGCTTGCTTTGATGTTGAAGATCTTGGACTATCAAGTTGTGAAATGGTATAG
Protein sequence
MDTEGSSSSNLNTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITAALHGQKLDGYVMGTIAQPPEMIQGTGANATTLISNPAFDSWSTTDQSLLAWLYGSITPSVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAHSLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNVVTNNIDVTNASANYASNRSFNQRGSTPQANNKAPGAFMATPNVVNDQNWLMDSGATNHTTNDVTYLGQKDEYNGNEMLTDKQSGRTILEGRLSEGLYQLDLPKPKAHFSASNKAVNFRPSHPQNPSSTNHTLLPQMSQTSHSNPVGTVTKLATPAEQSSPSKSVSQQENLVVNSTAATNVCGNGIACFDVEDLGLSSCEMV
Homology
BLAST of Moc04g24320 vs. NCBI nr
Match:
XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])
HSP 1 Score: 272.7 bits (696), Expect = 5.5e-69
Identity = 160/384 (41.67%), Postives = 221/384 (57.55%), Query Frame = 0
Query: 1 MDTEGSSSSNL--NTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITA 60
M TE + +S++ + + + T + + FG+PL TVL VKLD+KNY LW+ M+ A
Sbjct: 1 MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60
Query: 61 ALHGQKLDGYVMGTIAQPPEMIQGTGANATT--LISNPAFDSWSTTDQSLLAWLYGSITP 120
L GQK DGYV+GT+A+PP+ + T+ L NP + W DQ+LL WL+GS+TP
Sbjct: 61 VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEYVEWQAVDQALLGWLFGSMTP 120
Query: 121 SVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAH 180
S+ACD+++ R+SR+VWKALEDLYGAT+KARI QL+ LQ T+KN LKMSEYL MKQ +
Sbjct: 121 SIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQASE 180
Query: 181 SLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNV 240
SL LAGEPV+ N L++ VL+ L+AEYLP+ CQI GK++ +WQE+ ATL+ FENTL+ LN+
Sbjct: 181 SLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMRLNI 240
Query: 241 VTNNI--DVTNASANY-------ASNRSFNQ--------RGS------------------ 300
V+ +++ S NY NR F+Q RGS
Sbjct: 241 VSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQSGQGQGRGSYNSNDAKNNVRGRGRGRF 300
Query: 301 -----------------------------------TPQANNKAPGAFMATPNVVNDQNWL 311
+NN A+MA P +V + +WL
Sbjct: 301 SPYRGNNSKPSCQLCGKYGHIAAVCYKRFDENFNNLSSSNNNRNSAYMAIPEIVAEPSWL 360
BLAST of Moc04g24320 vs. NCBI nr
Match:
XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])
HSP 1 Score: 272.7 bits (696), Expect = 5.5e-69
Identity = 160/384 (41.67%), Postives = 221/384 (57.55%), Query Frame = 0
Query: 1 MDTEGSSSSNL--NTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITA 60
M TE + +S++ + + + T + + FG+PL TVL VKLD+KNY LW+ M+ A
Sbjct: 1 MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60
Query: 61 ALHGQKLDGYVMGTIAQPPEMIQGTGANATT--LISNPAFDSWSTTDQSLLAWLYGSITP 120
L GQK DGYV+GT+A+PP+ + T+ L NP + W DQ+LL WL+GS+TP
Sbjct: 61 VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEYVEWQAVDQALLGWLFGSMTP 120
Query: 121 SVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAH 180
S+ACD+++ R+SR+VWKALEDLYGAT+KARI QL+ LQ T+KN LKMSEYL MKQ +
Sbjct: 121 SIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQASE 180
Query: 181 SLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNV 240
SL LAGEPV+ N L++ VL+ L+AEYLP+ CQI GK++ +WQE+ ATL+ FENTL+ LN+
Sbjct: 181 SLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMRLNI 240
Query: 241 VTNNI--DVTNASANY-------ASNRSFNQ--------RGS------------------ 300
V+ +++ S NY NR F+Q RGS
Sbjct: 241 VSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQSGQGQGRGSYNSNDAKNNVRGRGRGRF 300
Query: 301 -----------------------------------TPQANNKAPGAFMATPNVVNDQNWL 311
+NN A+MA P +V + +WL
Sbjct: 301 SPYRGNNSKPSCQLCGKYGHIAAVCYKRFDENFNNLSSSNNNRNSAYMAIPEIVAEPSWL 360
BLAST of Moc04g24320 vs. NCBI nr
Match:
XP_022142770.1 (uncharacterized protein LOC111012809 [Momordica charantia])
HSP 1 Score: 255.8 bits (652), Expect = 6.9e-64
Identity = 154/341 (45.16%), Postives = 193/341 (56.60%), Query Frame = 0
Query: 114 ITPSVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQ 173
++P +ACD+L++ TSRDVWKALEDLY NKARI QLK +LQ TRKNQLKMS+YLSTMKQ
Sbjct: 1 MSPIIACDVLSMATSRDVWKALEDLYETANKARINQLKTSLQTTRKNQLKMSDYLSTMKQ 60
Query: 174 LAHSLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIH 233
LA L LAGEP+S +SL+++VLT L+AEYL + CQIN KEN++WQE+HATL+ FEN LIH
Sbjct: 61 LADCLTLAGEPISTSSLLSSVLTGLNAEYLQIICQINAKENISWQEVHATLITFENILIH 120
Query: 234 LNVVTNNIDVTNASANYASNRSFNQR---------------------------------- 293
LN V + DV+ SANY N+S +Q
Sbjct: 121 LNNV-SIADVSGPSANYTYNKSVSQNWNPHQQGQGRGQGRNSRGRNRGGRFQGQRSNSSR 180
Query: 294 -------------------------GSTPQANNKAPGAFMATPNVVNDQNWLMDSGATNH 353
G+TPQ N+AP A++ P V+ D NWL+DSGATNH
Sbjct: 181 PTCQVCGKIGHLAVVCYHRLNMQYMGNTPQGGNQAPNAYITGPEVIIDPNWLIDSGATNH 240
Query: 354 TTNDVTYLGQKDEYNGNEMLT-----------------------DKQSGRTILEGRLSEG 373
TND T LGQ+ EY GNE LT DK++GR +LEG+L++G
Sbjct: 241 KTNDATNLGQQAEYQGNENLTVGNRYKLAIAHVGSTVICQKETMDKETGRIMLEGKLNQG 300
BLAST of Moc04g24320 vs. NCBI nr
Match:
TXG69253.1 (hypothetical protein EZV62_004188 [Acer yangbiense])
HSP 1 Score: 211.8 bits (538), Expect = 1.1e-50
Identity = 163/557 (29.26%), Postives = 241/557 (43.27%), Query Frame = 0
Query: 9 SNLNTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITAALHGQKLDGY 68
S+ +T + N++ S+PFGN L+ A+KLD +N++LWK+M+T + G +LDG+
Sbjct: 14 SSSSTATPTVLQEGSNSSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGH 73
Query: 69 VMGTIAQPPEMIQG-----------TGANATTLISNPAFDSWSTTDQSLLAWLYGSITPS 128
+ T PPE + G + + SNP ++ W DQ L+ WLY S+T +
Sbjct: 74 LYSTRPCPPEFLPSPTTPGVPSPTTPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTEN 133
Query: 129 VACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAHS 188
VA ++ T+ +WKALE+L+GA +K++ ++ ++Q TRK M EYL+ MK A S
Sbjct: 134 VALSVMGSTTAAGLWKALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADS 193
Query: 189 LALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNVV 248
LA+AG+P EN L N L LD+EY+P+ I +E+ TWQE++ TLL++++ L H+N V
Sbjct: 194 LAIAGDPYPENLLFANSLAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNV 253
Query: 249 ---------------------------TNNIDVTNASANYASNR---------------- 308
T+N N N A NR
Sbjct: 254 SAKGNLLSSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGR 313
Query: 309 -------------------------SFNQRGSTPQANNKA--PGAFMATPNVVNDQNWLM 368
N GS P AN+ A P F+ATP V+D W
Sbjct: 314 NNNSRPTCQVCGKFGHSASVCYFRYDDNYMGSVPTANSNANSPSVFVATPETVDDTTWYA 373
Query: 369 DSGATNHTTNDVTYLGQKDEYNGNEML--------------------------------- 414
DSGATNH TND L K +Y G+E L
Sbjct: 374 DSGATNHVTNDAGNLDLKSDYRGDESLMVGNGKQLDISHVGLKSLPSLTKHSIILKQVLH 433
BLAST of Moc04g24320 vs. NCBI nr
Match:
TXG55646.1 (hypothetical protein EZV62_020902 [Acer yangbiense])
HSP 1 Score: 210.7 bits (535), Expect = 2.6e-50
Identity = 161/562 (28.65%), Postives = 243/562 (43.24%), Query Frame = 0
Query: 3 TEGSSSSNLNTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITAALHG 62
T SSS+ T + + N++ S+PFGN L+ A+KLD +N++LWK+M+T + G
Sbjct: 10 TLAPSSSSTETPTVLQEGS--NSSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKG 69
Query: 63 QKLDGYVMGTIAQPPEMIQG---TGANATTLISNPAFDSWSTTDQSLLAWLYGSITPSVA 122
+LDG++ T PPE + G + + SNP ++ W DQ L+ WLY S+T +VA
Sbjct: 70 HRLDGHLYSTRPCPPEFLPSPTTPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVA 129
Query: 123 CDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAHSLA 182
++ T+ +WKALE+L+GA +K++ ++ ++Q TRK M EYL+ MK A SLA
Sbjct: 130 LSVMGSTTAAGLWKALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLA 189
Query: 183 LAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNVV-- 242
+AG+P EN L N+L LD+EY+P+ I +E+ TWQE++ TLL++++ L H+N V
Sbjct: 190 IAGDPYPENLLFANILAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSA 249
Query: 243 -------------------------TNNIDVTNASANYASNR------------------ 302
T+N N N A NR
Sbjct: 250 KGNLLSSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRNN 309
Query: 303 -----------------------SFNQRGSTPQANNKA--PGAFMATPNVVNDQNWLMDS 362
N GS P AN+ A P F+ATP V+D W DS
Sbjct: 310 NSRPTCQVCGKFGHSASVCYFRYDDNYMGSVPTANSNANSPSVFVATPETVDDTTWYADS 369
Query: 363 GATNHTTNDVTYLGQKDEYNGNEML----------------------------------- 422
GATNH TND L K Y G+E L
Sbjct: 370 GATNHVTNDAGNLDLKSNYRGDESLMVGNGKQLDISHVGLKSLPSLTKHSIILKQVLHVP 429
Query: 423 -----------------------------TDKQSGRTILEGRLSEGLYQLDLPKPKAHFS 424
DK + +L GRL GLYQL++P K+ F
Sbjct: 430 EIRKNLLSVSRLVNDNDVFIEFHANCCFVKDKLTRMEVLRGRLKNGLYQLEIPTTKSAF- 489
BLAST of Moc04g24320 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 1.6e-15
Identity = 85/339 (25.07%), Postives = 134/339 (39.53%), Query Frame = 0
Query: 43 KLDEKNYLLWKSMITAALHGQKLDGYVMGTIAQPPEMIQGTGANATTLISNPAFDSWSTT 102
KL NYL+W + A G +L G++ G+ PP I G +A + NP + W
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI---GTDAVPRV-NPDYTRWRRQ 84
Query: 103 DQSLLAWLYGSITPSVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQL 162
D+ + + + G+I+ SV + T+ +W+ L +Y + +TQL+ +TR +Q
Sbjct: 85 DKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLR---FITRFDQ- 144
Query: 163 KMSEYLSTMKQLAHSLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKEN-MTWQEMH 222
LAL G+P+ + + VL +L +Y PV QI K+ + E+H
Sbjct: 145 ---------------LALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIH 204
Query: 223 ATLLAFENTLIHLN-----VVTNNIDVTNASANYASNRSFNQRGSTPQANNK-------- 282
L+ E+ L+ LN +T N+ VT+ + N +NR+ N RG NN
Sbjct: 205 ERLINRESKLLALNSAEVVPITANV-VTHRNTN--TNRNQNNRGDNRNYNNNNNRSNSWQ 264
Query: 283 -------------------------------------------------------APGAF 313
P A
Sbjct: 265 PSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRAN 324
BLAST of Moc04g24320 vs. ExPASy TrEMBL
Match:
A0A6J1DU77 (uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 2.7e-69
Identity = 160/384 (41.67%), Postives = 221/384 (57.55%), Query Frame = 0
Query: 1 MDTEGSSSSNL--NTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITA 60
M TE + +S++ + + + T + + FG+PL TVL VKLD+KNY LW+ M+ A
Sbjct: 1 MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60
Query: 61 ALHGQKLDGYVMGTIAQPPEMIQGTGANATT--LISNPAFDSWSTTDQSLLAWLYGSITP 120
L GQK DGYV+GT+A+PP+ + T+ L NP + W DQ+LL WL+GS+TP
Sbjct: 61 VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEYVEWQAVDQALLGWLFGSMTP 120
Query: 121 SVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAH 180
S+ACD+++ R+SR+VWKALEDLYGAT+KARI QL+ LQ T+KN LKMSEYL MKQ +
Sbjct: 121 SIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQASE 180
Query: 181 SLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNV 240
SL LAGEPV+ N L++ VL+ L+AEYLP+ CQI GK++ +WQE+ ATL+ FENTL+ LN+
Sbjct: 181 SLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMRLNI 240
Query: 241 VTNNI--DVTNASANY-------ASNRSFNQ--------RGS------------------ 300
V+ +++ S NY NR F+Q RGS
Sbjct: 241 VSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQSGQGQGRGSYNSNDAKNNVRGRGRGRF 300
Query: 301 -----------------------------------TPQANNKAPGAFMATPNVVNDQNWL 311
+NN A+MA P +V + +WL
Sbjct: 301 SPYRGNNSKPSCQLCGKYGHIAAVCYKRFDENFNNLSSSNNNRNSAYMAIPEIVAEPSWL 360
BLAST of Moc04g24320 vs. ExPASy TrEMBL
Match:
A0A6J1DTZ7 (uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 2.7e-69
Identity = 160/384 (41.67%), Postives = 221/384 (57.55%), Query Frame = 0
Query: 1 MDTEGSSSSNL--NTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITA 60
M TE + +S++ + + + T + + FG+PL TVL VKLD+KNY LW+ M+ A
Sbjct: 1 MTTEETENSSVPPQVVTNVAVPTPNPSPQFNTSFGHPLGTVLTVKLDDKNYSLWRGMVLA 60
Query: 61 ALHGQKLDGYVMGTIAQPPEMIQGTGANATT--LISNPAFDSWSTTDQSLLAWLYGSITP 120
L GQK DGYV+GT+A+PP+ + T+ L NP + W DQ+LL WL+GS+TP
Sbjct: 61 VLRGQKFDGYVLGTLAKPPQFLVSPETEGTSDHLQVNPEYVEWQAVDQALLGWLFGSMTP 120
Query: 121 SVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAH 180
S+ACD+++ R+SR+VWKALEDLYGAT+KARI QL+ LQ T+KN LKMSEYL MKQ +
Sbjct: 121 SIACDVVDFRSSREVWKALEDLYGATSKARINQLRNVLQNTKKNSLKMSEYLGLMKQASE 180
Query: 181 SLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNV 240
SL LAGEPV+ N L++ VL+ L+AEYLP+ CQI GK++ +WQE+ ATL+ FENTL+ LN+
Sbjct: 181 SLKLAGEPVAFNYLMSCVLSGLEAEYLPIVCQIEGKDSTSWQELFATLVTFENTLMRLNI 240
Query: 241 VTNNI--DVTNASANY-------ASNRSFNQ--------RGS------------------ 300
V+ +++ S NY NR F+Q RGS
Sbjct: 241 VSTATAEGISDGSXNYVHSKQNSVGNRQFHQSQSGQGQGRGSYNSNDAKNNVRGRGRGRF 300
Query: 301 -----------------------------------TPQANNKAPGAFMATPNVVNDQNWL 311
+NN A+MA P +V + +WL
Sbjct: 301 SPYRGNNSKPSCQLCGKYGHIAAVCYKRFDENFNNLSSSNNNRNSAYMAIPEIVAEPSWL 360
BLAST of Moc04g24320 vs. ExPASy TrEMBL
Match:
A0A6J1CLV9 (uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012809 PE=4 SV=1)
HSP 1 Score: 255.8 bits (652), Expect = 3.4e-64
Identity = 154/341 (45.16%), Postives = 193/341 (56.60%), Query Frame = 0
Query: 114 ITPSVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQ 173
++P +ACD+L++ TSRDVWKALEDLY NKARI QLK +LQ TRKNQLKMS+YLSTMKQ
Sbjct: 1 MSPIIACDVLSMATSRDVWKALEDLYETANKARINQLKTSLQTTRKNQLKMSDYLSTMKQ 60
Query: 174 LAHSLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIH 233
LA L LAGEP+S +SL+++VLT L+AEYL + CQIN KEN++WQE+HATL+ FEN LIH
Sbjct: 61 LADCLTLAGEPISTSSLLSSVLTGLNAEYLQIICQINAKENISWQEVHATLITFENILIH 120
Query: 234 LNVVTNNIDVTNASANYASNRSFNQR---------------------------------- 293
LN V + DV+ SANY N+S +Q
Sbjct: 121 LNNV-SIADVSGPSANYTYNKSVSQNWNPHQQGQGRGQGRNSRGRNRGGRFQGQRSNSSR 180
Query: 294 -------------------------GSTPQANNKAPGAFMATPNVVNDQNWLMDSGATNH 353
G+TPQ N+AP A++ P V+ D NWL+DSGATNH
Sbjct: 181 PTCQVCGKIGHLAVVCYHRLNMQYMGNTPQGGNQAPNAYITGPEVIIDPNWLIDSGATNH 240
Query: 354 TTNDVTYLGQKDEYNGNEMLT-----------------------DKQSGRTILEGRLSEG 373
TND T LGQ+ EY GNE LT DK++GR +LEG+L++G
Sbjct: 241 KTNDATNLGQQAEYQGNENLTVGNRYKLAIAHVGSTVICQKETMDKETGRIMLEGKLNQG 300
BLAST of Moc04g24320 vs. ExPASy TrEMBL
Match:
A0A5C7IJ06 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004188 PE=4 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 5.6e-51
Identity = 163/557 (29.26%), Postives = 241/557 (43.27%), Query Frame = 0
Query: 9 SNLNTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITAALHGQKLDGY 68
S+ +T + N++ S+PFGN L+ A+KLD +N++LWK+M+T + G +LDG+
Sbjct: 14 SSSSTATPTVLQEGSNSSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKGHRLDGH 73
Query: 69 VMGTIAQPPEMIQG-----------TGANATTLISNPAFDSWSTTDQSLLAWLYGSITPS 128
+ T PPE + G + + SNP ++ W DQ L+ WLY S+T +
Sbjct: 74 LYSTRPCPPEFLPSPTTPGVPSPTTPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTEN 133
Query: 129 VACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAHS 188
VA ++ T+ +WKALE+L+GA +K++ ++ ++Q TRK M EYL+ MK A S
Sbjct: 134 VALSVMGSTTAAGLWKALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADS 193
Query: 189 LALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNVV 248
LA+AG+P EN L N L LD+EY+P+ I +E+ TWQE++ TLL++++ L H+N V
Sbjct: 194 LAIAGDPYPENLLFANSLAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNV 253
Query: 249 ---------------------------TNNIDVTNASANYASNR---------------- 308
T+N N N A NR
Sbjct: 254 SAKGNLLSSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGR 313
Query: 309 -------------------------SFNQRGSTPQANNKA--PGAFMATPNVVNDQNWLM 368
N GS P AN+ A P F+ATP V+D W
Sbjct: 314 NNNSRPTCQVCGKFGHSASVCYFRYDDNYMGSVPTANSNANSPSVFVATPETVDDTTWYA 373
Query: 369 DSGATNHTTNDVTYLGQKDEYNGNEML--------------------------------- 414
DSGATNH TND L K +Y G+E L
Sbjct: 374 DSGATNHVTNDAGNLDLKSDYRGDESLMVGNGKQLDISHVGLKSLPSLTKHSIILKQVLH 433
BLAST of Moc04g24320 vs. ExPASy TrEMBL
Match:
A0A5C7HHE9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1)
HSP 1 Score: 210.7 bits (535), Expect = 1.2e-50
Identity = 161/562 (28.65%), Postives = 243/562 (43.24%), Query Frame = 0
Query: 3 TEGSSSSNLNTLNAMPIATAINNTISSNPFGNPLSTVLAVKLDEKNYLLWKSMITAALHG 62
T SSS+ T + + N++ S+PFGN L+ A+KLD +N++LWK+M+T + G
Sbjct: 10 TLAPSSSSTETPTVLQEGS--NSSNESSPFGNKLNQSFAIKLDRQNFILWKTMVTTIIKG 69
Query: 63 QKLDGYVMGTIAQPPEMIQG---TGANATTLISNPAFDSWSTTDQSLLAWLYGSITPSVA 122
+LDG++ T PPE + G + + SNP ++ W DQ L+ WLY S+T +VA
Sbjct: 70 HRLDGHLYSTRPCPPEFLPSPTTPGVSDSGSCSNPEYEKWLVNDQLLMGWLYSSMTENVA 129
Query: 123 CDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQLKMSEYLSTMKQLAHSLA 182
++ T+ +WKALE+L+GA +K++ ++ ++Q TRK M EYL+ MK A SLA
Sbjct: 130 LSVMGSTTAAGLWKALENLFGAYSKSKANTIRTSIQTTRKGSSTMEEYLTQMKTWADSLA 189
Query: 183 LAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHATLLAFENTLIHLNVV-- 242
+AG+P EN L N+L LD+EY+P+ I +E+ TWQE++ TLL++++ L H+N V
Sbjct: 190 IAGDPYPENLLFANILAGLDSEYMPIVVLIEAREHFTWQEIYDTLLSYDSKLEHINNVSA 249
Query: 243 -------------------------TNNIDVTNASANYASNR------------------ 302
T+N N N A NR
Sbjct: 250 KGNLLSSPSAHLATNKPNNTPNTNKTSNQQNLNQGGNRAPNRGGFRGGGGRFRGRGGRNN 309
Query: 303 -----------------------SFNQRGSTPQANNKA--PGAFMATPNVVNDQNWLMDS 362
N GS P AN+ A P F+ATP V+D W DS
Sbjct: 310 NSRPTCQVCGKFGHSASVCYFRYDDNYMGSVPTANSNANSPSVFVATPETVDDTTWYADS 369
Query: 363 GATNHTTNDVTYLGQKDEYNGNEML----------------------------------- 422
GATNH TND L K Y G+E L
Sbjct: 370 GATNHVTNDAGNLDLKSNYRGDESLMVGNGKQLDISHVGLKSLPSLTKHSIILKQVLHVP 429
Query: 423 -----------------------------TDKQSGRTILEGRLSEGLYQLDLPKPKAHFS 424
DK + +L GRL GLYQL++P K+ F
Sbjct: 430 EIRKNLLSVSRLVNDNDVFIEFHANCCFVKDKLTRMEVLRGRLKNGLYQLEIPTTKSAF- 489
BLAST of Moc04g24320 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 60.5 bits (145), Expect = 4.0e-09
Identity = 62/270 (22.96%), Postives = 116/270 (42.96%), Query Frame = 0
Query: 40 LAVKLDEKNYLLWKSMITAALHGQKLDGYVMGTIAQPPEMIQGTGANATTLISNPAFDSW 99
+ + L++ NY +W+ + + G++ G+ + P M + W
Sbjct: 24 VTLDLNKLNYDVWRELFETLCLSFGVLGHIDGS-STPTPMTE---------------KRW 83
Query: 100 STTDQSLLAWLYGSITPSVACDILNLR-TSRDVWKALEDLYGATNKARITQLKRNLQMTR 159
D + W+YG+IT S+ I+ + T+RD+W +LE+L+ +AR Q + L+ T
Sbjct: 84 KERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTT 143
Query: 160 KNQLKMSEYLSTMKQLAHSLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENM-TW 219
+ L + EY +K L+ L P+S+ L+ ++L L +Y + I K ++
Sbjct: 144 IDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSF 203
Query: 220 QEMHATLLAFENTLIHLNVV----TNNIDVTNA-----------SANYASNRSFNQRGST 279
E + LL E+ L + + TN+ ++N Y +N S RG +
Sbjct: 204 TEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEYHNNNSNMGRGRS 263
Query: 280 PQANNKAPGAFMATPNVVNDQNWLMDSGAT 293
+ N G + N+ NW ++ T
Sbjct: 264 KKKNR---GGGSSDGRYNNNNNWRLNQPPT 274
BLAST of Moc04g24320 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 55.1 bits (131), Expect = 1.7e-07
Identity = 47/207 (22.71%), Postives = 91/207 (43.96%), Query Frame = 0
Query: 44 LDEKNYLLWKSMITAALHGQKLDGYVMGTIAQPPEMIQGTGANATTLISNPAFDSWSTTD 103
++E NY W+ + + G++ GT+ T AN +W D
Sbjct: 26 IEESNYDAWRELFLTHCLSFDVMGHIDGTLLP-------TNANDV---------NWQKRD 85
Query: 104 QSLLAWLYGSITP-SVACDILNLRTSRDVWKALEDLYGATNKARITQLKRNLQMTRKNQL 163
+ LYG++TP + TSRD+W +++ + AR +L L+ +
Sbjct: 86 GIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDM 145
Query: 164 KMSEYLSTMKQLAHSLALAGEPVSENSLITNVLTDLDAEYLPVACQINGKENMTWQEMHA 223
++++Y MK+LA SL PV++ +L+ VL L+ ++ + I ++ + A
Sbjct: 146 RVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAA 205
Query: 224 TLLAFENTLIHLNVVTNNIDVTNASAN 250
T+L E + + N V ++S++
Sbjct: 206 TMLQEEEDRLKRAIKPNPTHVDHSSSS 216
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157748.1 | 5.5e-69 | 41.67 | uncharacterized protein LOC111024384 isoform X1 [Momordica charantia] | [more] |
XP_022157750.1 | 5.5e-69 | 41.67 | uncharacterized protein LOC111024384 isoform X2 [Momordica charantia] | [more] |
XP_022142770.1 | 6.9e-64 | 45.16 | uncharacterized protein LOC111012809 [Momordica charantia] | [more] |
TXG69253.1 | 1.1e-50 | 29.26 | hypothetical protein EZV62_004188 [Acer yangbiense] | [more] |
TXG55646.1 | 2.6e-50 | 28.65 | hypothetical protein EZV62_020902 [Acer yangbiense] | [more] |
Match Name | E-value | Identity | Description | |
Q9ZT94 | 1.6e-15 | 25.07 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DU77 | 2.7e-69 | 41.67 | uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DTZ7 | 2.7e-69 | 41.67 | uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CLV9 | 3.4e-64 | 45.16 | uncharacterized protein LOC111012809 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A5C7IJ06 | 5.6e-51 | 29.26 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004188 PE=4 SV=1 | [more] |
A0A5C7HHE9 | 1.2e-50 | 28.65 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G48050.1 | 4.0e-09 | 22.96 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
AT1G34070.1 | 1.7e-07 | 22.71 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |