Moc04g11130 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g11130
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Locationchr4: 8385602 .. 8393510 (+)
RNA-Seq ExpressionMoc04g11130
SyntenyMoc04g11130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCCCACCATTTCACTGGCTCAAGATGGACTTCCGGTTATTGGTAGGACCATAATCGGGTTGTTCATTAGAGTATCAGTGGTACTTAAGGTCCAAGATGTAACATAGGGGTAAAACCGTAATTTGACCCAACTGTGGTTACGAACACTCGTGAAGGATTAACTTACCATTAATGGTCAAAATTCGTGGACGAGTTCAACTGTGGTCTTTAGTGGAATGACCAACAGTTAACGAATGTTAATTAATATAGTTAATATGAGTTTAATAAATTAATATCGTATCGTTGGAGATTCTAATCTATAGGTCCATTAGATCTCCTTGCTAGCTCGTAAAAGATAGTTAAGAACATGTAGTCTTGAAAAGAATTTGAATTGTTCAAATTTGTTAACATGAATTAAAGTACTTGTATGAGATGCAATTAACATAATGCATTTTGATACATTATAATACAAAGTTAATTTTGAATTAGATTCAAAATTATGAGAGAGATGAATATTTGAATTTGATTCTAATATGGTTGATTAATTTAAGTTTAATTTGATTAAATATGATTTAATTAAATTAATGGGATATGTTAATTTGGTTAAATTAAATTAAATTAAATTAAATTAGATTAAATTAAATTAATATTTTTTTTAATTAAATTAAATTAGATTTCATTAATTATTAATTTAATTAAAATTGTTTTATTAAATTAAAATAAAACAAAAAAAAGAAAAAGAAAATGGGAGGAAGATACTCCCACCATTTGGTGGGAAGTGGGGAACTGAGTAGTGAAGTGGTGACTTCCCCCTCACTCCTCCTTCCCTATAAAAGGGAGGTGCTCCCCTCTTCTTTGTGACGTTCCCTGGTTCTCGGTTGTTGAGTTTCTGAAACTCCAACTAGAAATTCTTTCTCTCGATCTCTCGGTTTCCCTTTCAATTATAAGACGGTTCCCACAAACCGAATTCTTAACTTCCAGAGGATAGTGAGGAAGACTTTTTGGTGGCATTGGTGTCTACATTGAAGAGGTGTCTTCAAAGGTATGTATCACTAACTTCCTTTACACATGCTTATGCCTTTTCTTCGTTGTAATTCTAAAACAAGATCGAAGCACACACGTTCGCGCTCTTCCACTACGGGATCTGATCCCTTCAATTAGTAATAGAGCCAAGACTCTGCTTTTGATCTTGTTTTGAATTACAAAGAAAAGAATGGTGGGTATTTCTATACATTTGATGTATGTGGTTTTCAAATAGATGTTTTCGGTTTTACAATTTTTTCGTTGATTCGATCAATGTAAGGGCCTGTTAGTTTGACCGTTTAATTCTGTAAATCGAGTATGGAAGTCCGTGTCGTTCGTGGCAAGGAATTGTTGTGAAAGAGTACCAAAGAAGTGAAGAAAAACGGAGGAACCAGGCAGACAACGCCTTGGCATGCCAGAGCTATAAAAACCCAAGAGCTCGAGCCTGCAGCAATGGGGGCAGTGTGGGCTCGGGCGCCTAGGCAACAGGTTTTTTTAAAAAAAATTGTTTTTTTTTTGTTTTTGTCATTTCTTGTAGGAAGCAAAAAACTGGTCTATTTTGCTATTTAATTATTATGTATTTTGAATATATACTTACTTAGTTGTATATGTTGCATAAAGTATGCCATATAGTTTTAAATCCCATCATAGGTTAGGCATGTTCATGCATCATATGTATATAATAGTTATAATGTATGATAGCATGATTAATTCATATAAGTGTTGTATTAATTAGCATGCTATTTTCATGATAGCATGATGAAAATAAAGTTGCATTGAGCATGACATTACTTTATATTTATGTATGTCAATGCATGATTATAGTTTCAATTTCTTTAAATTTATAAGTGTTATAAGTTTGATGAATGGAAATTAAAGTCTATAATCAAGAATTGCATGCAAACCCTAGGTCTTCAACAATTAATTTTAAAGGGGTTTGAAATTGATTATATCCTAAGTAATATACTTATTATTTTTGTTTTAAATAGGTTTAAAACGACGAAATAAAAGGTTAATATAAAATATTGCCTATAAGGGAGCACTGTCTAAGGAAGATTCTGTCTAGGTTGAGGTACTTAAGATGACCGTAAGGGAACGCCTCTACTTGGGAACCGACCTAGAGGTTGAATTAGTCAAATAATTTATATCATGCAATAACGTGGTTAGTTCGTTAAAGTGTTTAATGAACTAAGACATTTATTGTTAAACAAATCCAATATAAACGTTATATTGGGCAAACTAATAAACTTAGATAATTTCATTTAGCCGGGTTTTACCTAAGTTATAGTTGTAAAATACTAAGTGGGAGGATTACGTGTATATATAAAATATACAAAGTATATGAGATATATGTGGTGTATATATACATTATTTCCCTCACGTTCTCCGTATAAGTTCACACCGTGAGTTCCATGCTCGACCTCGTGTCGCCCTTGGCGCGGCCTCCCTACGAAAGGTGTTTGCATGGTTCAATACCAAGGTGAATGGATAAAGTATTTATAGTTAGTGGGAGAAGGACGTGTGACAAAATATCTTATGGTCTCCTCCATTCGTTTGCAACGTGAGGTTTCATACACGGCCTGCGTGTCGTCCTGGAGCGACCACCCCTATGGAGGGTCTGTTGTATGGAATCAAAATCAAGGCAAACTCCAGAAATGGATAAGGTCTCTTAGGTTTTGCACCAATATTTGTCATTCCCTACGGTAGGCTTATTGGGGCAGACCTCGAAGGTCTGAAAATAGCAGGTCACACTTATAGGAAGTTGTTAAGTTAGTTAATAACTTCTTGACCAAACAAACGATGACTTACTATTATAGAAATAAGAGTTATTCTGGTGTAATATTTAGTTAAGAATGTCTCAATTCAGTAAAGTGACTGTTCTACGGTAGCTATTTCTCTAAATCACTAAAGCATCGTAGCAAAAACAATCTTGATTGATAGGGTGCATTATTACTTTTTGCTAAAACTGATTGGGCTTTTAATGGTAGTGCAAGTATCTAATATAGATTTGTTTGTATTTCAGCATGTCTACTTCCGTTATTGCCCTACTTACCATCGAAAAAATTAACGGCAAAAATTACACACAATGGAAAACGAACCTTAACACGATACTCGTGGTAGATGATCTTAGGTTCGTCTTAACCGATGAGTGTGCTCAGGCTCCTACGCCTAATACAGCCCGAGCCAGTCGGATGCCTATGACAGATGGATCAGGCCAATGACAAGGCCAAAGTCCACATCTTGGCAAGCATATCTGATGTACTTGCCAAGAAGCATGAGAGCATGGTCACAGTAAGTGAGATTATGGACTCGTTGTGGGATACGTTTGGACAATCGTCCATTCAAGCCCGACACGATACCTTCAAGTTGATTTAAAATTCCCGCATGAGAGAGGGAACATCAGTGCGAGAACATATTCTCAATCTGATGGTCCACTTTAATGTGGTTGAAGTTAACGACACTGTTATAAACGAGGGGAGTCAGATCAGCTTTATTTTGGAATCTCTTCCGAAGAGTTTTCTTCCGCAGCAATGCTATGATGAACAAGATAGAGTACAACCTTACCACGCTCTTAAGTGAGCTACAGCTTTTTCAGTCTTATGAAAAATAAGGAACAGAAAGGGGAGACAATCGTTGTCACCTCAAAACGATTCCATCGAGGTTCGACCTCAGGAACCAAATCTGTACTTTCTTCTTCTAGAAGTAAGCCTTTCAAGAAGAAAAACAGTGGTAAGGGGATGAAAGCTGACCCTATTGCTACTGCTGCTACCAAGAAGGGCAAGCCAAAGTTGCAGACAAAGGAAAATATTTCCGCTGCAACGTGGATGGGCACTGGAAAAGAAACTGCCCGAAATAATTGGCCGAAAAGAAGAAAGCCAAATAAGGTAAATATGATTTACTTATTCTTGAAACTTGCTTAGTGGAGAGTGATGATTCTGCTTGGATATTGGATTCAGGGGCCACTAATCATGTTTGTTTTTCTTTTCAGGGAATTAGTTACTGGAGGTAGCTTAATGCTGGGGATATGACTCTCAAAGTCAGAACGGGAGATGTCATCTCACCAGTCGCAGTGGGAGACCTAAAGTTGTTTTTAGACAAGAATACATATATATTATTAGATAATGTGTATGTAATTCCCAATGTTAAACATAATGCATTTTGATATATTATAATACAAAGTTAATTTTGGATTAGATTTAAAATTATGACATAGATGAATATTAGAATTTGATTCTAATATGGTTGATTAATTTAAGTTTAATTTGATTAAATATGATTTAATTAAATTAATTGAATTAATGAGATATGTTAATCTGGTTAAATTAAATTAATTGAATTAATGATATATGTTAATCTGGTTAAATTAAATTAATAAAAAAATTTTGTAATTAATTAAATTAGACTTAATTAATTATTAATTTAATTAAATTAAAATTAAACCAAAAAAAAAAGAAAAAGAAAATGGGAGGAAAAACCTCCCACTTCCCACCATGGTGGGAAGTGGGGAAGTGAGTGGGGAAGTGGTCACTTCTACCTCACTCCTCATTCCCTATAAAAGGGAGGTGCTCACCTTTTCTTTGTGACGTTCCCCGATCCTTGGTTGTTGAGTTTCCAAAACTCCAACTTGAAAATCTCTCTCTCGATCTATCGGTTTCCCTTTCAATTATAAGACGGTTCTCACAAACCGAGTTCTTAACATCCAGAGGATAGTAAGGAAGACTTTTTGGTGGTGTTGGTGTCTACATTGAAGAGTTGAAGAGGTGTCTTCAAAGGTATGTATTACTAACTTCCTTTTATTCATGTTTATGTCTTTTTTCGTTGTAATTCTAAAACAAGATTGAAGCACACGCGTTCGTGTTCTTCCGCTGTGGGATCTGATCCCTTCACGGTGGTGGTGTTGAACGGAATCACTGGAAAATATATGAAGAAGGTCTTCAAATGTAAGTTTTTTCCCTGTATTTTTCTTTGGTTTTGTGGGTTTTTGTTCTTAAAAATTCAAGAACAAGATCTTTGTTTCTGCTGCGGGATTGACATCCTTTCAAATACAACAGTAACAGGGGACAACATAAGCCAAAATCCCAAAAGAAGGACGAACGCCCGCCGGCCATCCTCACCATCAGTGGAGGCCTGGTAGGAGGACATTCCAACAACGAACGAAAGGCATTGACCATGTCGTTACGGGTTTGCGACGTGGAGCGGCTGAATTTCTTCCCGAGAGAAGAAAAATGGAGTCGCCACCATTTTATTTATAGGGTGTGACTAGACACCCAAATGCATGGATAACTTGATCTGCACAAAAAGATTTAGATTCGGGGATGTTTTGTCTATGGGGAAAGTATTAGCACCCCACAACACTCGTTCAATAAACAATAATTTATTTTTCATATTATTTTCAAGAAAATGAACTTAAAAAATGAATTTATTTTTTATTTTTAAATGTCCCACGTTTTATTGATCATTATTCGTAAGGTAAATAATGAATAATAATTATGAGTGGCCTAAAGCCATTAAGAAAATTTTGTTTATTTGAATCCAAATTAGCCTCCCAAAATAAATTCATCACCTCAAAGAATATTAGGGAATCGACCTCTCAAATTCTCCAATCTCTGTCATAAGAAATTTTTTAGGAAAATATTAAAATAACATTTAGAAAAAGATTTTATTTTTGACTTTTAGAAATATCATTGGTGCTTTAAAAAATGTCAACTTTTTAGAAGGAAATGCATTTATGAAGATGTTTTTTTTTTAGCAAAATTTTACTTATAAAAGAAGATTTAAAAAACAAAATATATTTTTATTTTTTAAAGAAAAGATATTTATTTGCTTCAAAATATGATTTTTTTTAGGAAAAAGAAATGCAAACAATTTTGTATTAGTATTTCAATTACTTTTTAAAACTGAACAAGTGATAAATGAGAAAACGACTAAAAATACATTATTCCATTTGGAAACATATTAAAAATCAAATCTTGGCCTCTTGAAATATTGATCTTTACCCTCAAGAATCCAAGAACATCGGCCTCCCAAACATTTCAAGGTTCCATCATTGGGAGGTTCACCTTTGTAAAATTTGAGTTGAAGATATTTATTAAAATCAAGAAAAATAACATTTATTGTAGAATATTACATAATATATACATTTGCCAAATATCATACACATAATCTAAATGAACATGCTAGAAATATAATCAATAAAATCTCATCTTACAAATAGTTCAAGCAACCATAATATGAAATTGGCAATGGGGAAAAGGAAAAACAAGACGAAATAAAACAAGATAAGAAATATATCCCGAAAATAATGTCGAAAGAATTAAACATGTACTTGGAACATAGATAGGCAAAAAAAATATATGCCGAAGTACATCAACCTACTTTATTCGGCTAGAACATGGAAACTTACAGTTTTGCAAGCAAACTCTGATTCTTACCTCCTCCTTCAAATGCAGCGTGAGTCAAACGATGAAGAAGAAAATTGTGGAGAAAATAGTGATAGAGCAAAAATTGAGAGAAAGTGAATAATGAAAGGGAAAAATGTAAAACAAAAGGTAGTAACCAAAAAAAGAAAGGAAGAGGATGAAAATGAGAGAGACACCGTGGTGGAATATGAGAAACGAGTGAGATGGTGGAATAGGAGTTTGTGGGAGAATGATAAAGTGATCAATCGAGATAAAACAAAAGGAAGCAAACTTTAGAAGAGAGCAAAAAATAAAAATCATGACTAGTAGACCTCTTTTGTGATGTGTTTCCTCCGTCCCCTAAACCTAGCCACCAAGTTCCTATTTATAGTGTTTCAAAACTCTAATTTACAAATAGAAAAAATATTTTAATTCATTACACAATCAATCAAATCTTATGATTTTATTACAGATTTTGATTTTTAACCAAATTATGTTAAATCAAATTTAAAACTTTTCCACATCAGTAAGATTTTGTTTTATTTTTACTGAAAAGATTTTATTTTGAGAAAACATGAAAATTTACATTTAATAAAAAAAATATTTATTACTTTGTTACTTATTTTATTTTATTAAAAAAGATTTTGATTAAAAAAAAATAATAAGGAAATCGATATTTTAACAAAATACTATTTATTTTTTTGATAAAAAAATATTTCCCACAAAATATAAACAAAAATTATATTGAAAAATTACTATAAATTAAGTAAAGAAAAGAATGATGAAATGGAATACCGGACAAATTTAGGGGTCTACAGGCCCGATAAGCCCGAAACAGGCCAGTGTCGCATGAGGTCCTGACCACAAAAATGGTCAAGTCAGGCCTATCAGTAACCTTTACCGATGGAGAAGCTGGCATCCAGATCCAGCCATACAAGCATGCACTGGTAATCGTCGCGGGTATCAACCATGTGCCCACATACTAATTGTTGGTAGATGGGGGGAGCTCGACCAACGTCCTCCCCTTGAGGGTGCTACGCACGCTCGGGTTGGAGTCCACGAGGCTCAAAAGATGTCTGTCCCCGTTGATTGGTTTCTTAGGAGCGAGGGTCTACCTCAAAGGCAGCATTGAACTACCTTTGACCTTGGAAAAGGGGAAAGAGGCTGTCACCCAGATTGACGAGTTTGTAGTGGTAGACGGTCTCTCAGCATACAACGCCATACTGGGTAGACCAGCTATAATAACTTCAGGACTGTCTCGTCCATCTATCACTAAGTAATGAAGTTTCCAACTTCCAACGTGATGGGGACTATAGACGGACAGCAGCAGGCTTCGCGGGAGTGTTATGTCACTGTCATGAGAGAGCCAAAGACGATATATGCTATCAACGTTCAAGGCAAGCATCCCAAACCAGGCTCTCCCACGGAAAGCCTCGCCTCCAAAGAGAAATCAAATGGAGGCACTGCTGATGATGTGACCGGACAAGAAAAAAGCATTTGTTAG

mRNA sequence

ATGGACCCCACCATTTCACTGGCTCAAGATGGACTTCCGGTTATTGGTAGGACCATAATCGGGTTGTTCATTAGAGTATCAGTGAGTACCAAAGAAGTGAAGAAAAACGGAGGAACCAGGCAGACAACGCCTTGGCATGCCAGAGCTATAAAAACCCAAGAGCTCGAGCCTGCAGCAATGGGGGCAGTGTGGGCTCGGGCGCCTAGGCAACAGATGGATCAGGCCAATGACAAGGCCAAAGTCCACATCTTGGCAAGCATATCTGATGTACTTGCCAAGAAGCATGAGAGCATGGTCACAGTAATTAACGACACTGTTATAAACGAGGGGAGTCAGATCAGCTTTATTTTGGAATCTCTTCCGAAGAGTTTTCTTCCGCAGCAATGCTATGATGAACAAGATAGAGTACAACCTTACCACGCTCTTAAAAGTAAGCCTTTCAAGAAGAAAAACAGTGGTAAGGGGATGAAAGCTGACCCTATTGCTACTGCTGCTACCAAGAAGGGCAAGCCAAAGTTGCAGACAAAGGAAAATATTTCCGCTGCAACGTGGATGGGCACTGGAAAAGAAACTGCCCGAAATAATTGGCCGAAAAGAAGAAAGCCAAATAAGGGAATTAGTTACTGGAGATTGAAGCACACGCGTTCGTGTTCTTCCGCTGTGGGATCTGATCCCTTCACGGTGGTGGTGTTGAACGGAATCACTGGAAAATATATGAAGAAGGTCTTCAAATGCCTATCAGTAACCTTTACCGATGGAGAAGCTGGCATCCAGATCCAGCCATACAAGCATGCACTGGTAATCGTCGCGGGAGCGAGGGTCTACCTCAAAGGCAGCATTGAACTACCTTTGACCTTGGAAAAGGGGAAAGAGGCTGTCACCCAGATTGACGAGTTTGTAGTGGTAGACGGTCTCTCAGCATACAACGCCATACTGGACGGACAGCAGCAGGCTTCGCGGGAGTGTTATGTCACTGTCATGAGAGAGCCAAAGACGATATATGCTATCAACGTTCAAGGCAAGCATCCCAAACCAGGCTCTCCCACGGAAAGCCTCGCCTCCAAAGAGAAATCAAATGGAGGCACTGCTGATGATGTGACCGGACAAGAAAAAAGCATTTGTTAG

Coding sequence (CDS)

ATGGACCCCACCATTTCACTGGCTCAAGATGGACTTCCGGTTATTGGTAGGACCATAATCGGGTTGTTCATTAGAGTATCAGTGAGTACCAAAGAAGTGAAGAAAAACGGAGGAACCAGGCAGACAACGCCTTGGCATGCCAGAGCTATAAAAACCCAAGAGCTCGAGCCTGCAGCAATGGGGGCAGTGTGGGCTCGGGCGCCTAGGCAACAGATGGATCAGGCCAATGACAAGGCCAAAGTCCACATCTTGGCAAGCATATCTGATGTACTTGCCAAGAAGCATGAGAGCATGGTCACAGTAATTAACGACACTGTTATAAACGAGGGGAGTCAGATCAGCTTTATTTTGGAATCTCTTCCGAAGAGTTTTCTTCCGCAGCAATGCTATGATGAACAAGATAGAGTACAACCTTACCACGCTCTTAAAAGTAAGCCTTTCAAGAAGAAAAACAGTGGTAAGGGGATGAAAGCTGACCCTATTGCTACTGCTGCTACCAAGAAGGGCAAGCCAAAGTTGCAGACAAAGGAAAATATTTCCGCTGCAACGTGGATGGGCACTGGAAAAGAAACTGCCCGAAATAATTGGCCGAAAAGAAGAAAGCCAAATAAGGGAATTAGTTACTGGAGATTGAAGCACACGCGTTCGTGTTCTTCCGCTGTGGGATCTGATCCCTTCACGGTGGTGGTGTTGAACGGAATCACTGGAAAATATATGAAGAAGGTCTTCAAATGCCTATCAGTAACCTTTACCGATGGAGAAGCTGGCATCCAGATCCAGCCATACAAGCATGCACTGGTAATCGTCGCGGGAGCGAGGGTCTACCTCAAAGGCAGCATTGAACTACCTTTGACCTTGGAAAAGGGGAAAGAGGCTGTCACCCAGATTGACGAGTTTGTAGTGGTAGACGGTCTCTCAGCATACAACGCCATACTGGACGGACAGCAGCAGGCTTCGCGGGAGTGTTATGTCACTGTCATGAGAGAGCCAAAGACGATATATGCTATCAACGTTCAAGGCAAGCATCCCAAACCAGGCTCTCCCACGGAAAGCCTCGCCTCCAAAGAGAAATCAAATGGAGGCACTGCTGATGATGTGACCGGACAAGAAAAAAGCATTTGTTAG

Protein sequence

MDPTISLAQDGLPVIGRTIIGLFIRVSVSTKEVKKNGGTRQTTPWHARAIKTQELEPAAMGAVWARAPRQQMDQANDKAKVHILASISDVLAKKHESMVTVINDTVINEGSQISFILESLPKSFLPQQCYDEQDRVQPYHALKSKPFKKKNSGKGMKADPIATAATKKGKPKLQTKENISAATWMGTGKETARNNWPKRRKPNKGISYWRLKHTRSCSSAVGSDPFTVVVLNGITGKYMKKVFKCLSVTFTDGEAGIQIQPYKHALVIVAGARVYLKGSIELPLTLEKGKEAVTQIDEFVVVDGLSAYNAILDGQQQASRECYVTVMREPKTIYAINVQGKHPKPGSPTESLASKEKSNGGTADDVTGQEKSIC
Homology
[Close]
BLAST of Moc04g11130 vs. NCBI nr
Match: XP_022158513.1 (uncharacterized protein LOC111024986 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-13
Identity = 51/114 (44.74%), Postives = 65/114 (57.02%), Query Frame = 0 

Query: 266 LVIVAGARVYLKGSIELPLTLEKGKEAVTQIDEFVVVDGLSAYNAI-------------- 325
           LV  +G R++L+GSIELPLTL +GKE VT+I+EF+V+DGL AYN I              
Sbjct: 159 LVGFSGERLHLEGSIELPLTLGEGKEDVTRIEEFMVIDGLLAYNTILGRLAIHNIRAVPF 218

Query: 326 ----------------LDGQQQASRECYVTVMREPKTIYAINVQGKHPKPGSPT 350
                           LD QQ+AS ECY T M+EPK + AIN+    P+P S T
Sbjct: 219 TYHQTMKFPTLNEMRTLDEQQRASEECYATTMKEPKIVGAINILEGEPEPDSST 272

[Close]
BLAST of Moc04g11130 vs. NCBI nr
Match: KAA0051407.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 3.5e-08
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 0 

Query: 74  QANDKAKVHILASISDVLAKKHESMVTVI-------NDTVINEGSQISFILESLPKSFLP 133
           + NDKA+V+ILAS+SD+L+KKHE MVT +       N+TV +E SQ+SFIL+SLPKSFL 
Sbjct: 37  KTNDKARVYILASMSDILSKKHEIMVTALHFNVVEMNETVFDEKSQVSFILKSLPKSFLQ 96

Query: 134 QQCYDEQDRVQ 138
                E ++V+
Sbjct: 97  FHSNAEMNKVE 107

[Close]
BLAST of Moc04g11130 vs. NCBI nr
Match: KAA0041821.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK05343.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 7.9e-08
Identity = 63/196 (32.14%), Postives = 91/196 (46.43%), Query Frame = 0 

Query: 74  QANDKAKVHILASISDVLAKKHESMVTV-------------------------------- 133
           + NDKA+++ILAS+SD+L+KKHE MVT                                 
Sbjct: 37  KVNDKARLYILASMSDILSKKHEIMVTARQIMDSFREMFGQPSIQIKQEAIKYVYNARMK 96

Query: 134 --------------------INDTVINEGSQISFILESLPKSFLPQQCYDEQDRVQPYH- 193
                               +N  V +E SQ+S+IL+SL KSFL  +   E +++  Y+ 
Sbjct: 97  EGQSVTEHVLDIIINFNVVEMNGKVFDEKSQVSYILKSLSKSFLQFRSNTEINKID-YNM 156

Query: 194 --ALK--SKPFKKKNSGKGMKADPIATAATKKGKPKLQTKENISAATWMGTGKETARNNW 213
              LK  SK  +KK  GKG     IA     KGK K+ ++ENIS A WM   KET  +  
Sbjct: 157 TTLLKELSKKIQKKKGGKGKGHTSIAEG---KGKAKVASRENISTAMWMDIRKETTLSTL 216

[Close]
BLAST of Moc04g11130 vs. NCBI nr
Match: TYJ96675.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-07
Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 0 

Query: 57  PAAMGAVWARAPRQQMDQANDKAKVHILASISDVLAKKHESMVTV--------------- 116
           P A      R   ++  +AN+KA+ +ILAS+S+VL KKHESM+T                
Sbjct: 14  PTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAPSVREHVLNMMVHFN 73

Query: 117 ---INDTVINEGSQISFILESLPKSFLPQQCYDEQDRVQPYH------------ALKSKP 169
              +N  VI+E S++SFILESLP+SFL    +  +  +  +H            +  +K 
Sbjct: 74  VVGMNGAVIDEASRVSFILESLPESFLQ---FRSKAVMNKFHRGSTSGTKSVPSSSGNKK 133

[Close]
BLAST of Moc04g11130 vs. NCBI nr
Match: KAA0034863.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-07
Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 0 

Query: 57  PAAMGAVWARAPRQQMDQANDKAKVHILASISDVLAKKHESMVTV--------------- 116
           P A      R   ++  +AN+KA+ +ILAS+S+VL KKHESM+T                
Sbjct: 14  PTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAPSVREHVLNMMVHFN 73

Query: 117 ---INDTVINEGSQISFILESLPKSFLPQQCYDEQDRVQPYH------------ALKSKP 169
              +N  VI+E S++SFILESLP+SFL    +  +  +  +H            +  +K 
Sbjct: 74  VVGMNGAVIDEASRVSFILESLPESFLQ---FRSKAVMNKFHRGSTSGTKSVPSSSGNKK 133

[Close]
BLAST of Moc04g11130 vs. ExPASy TrEMBL
Match: A0A6J1DWB0 (uncharacterized protein LOC111024986 OS=Momordica charantia OX=3673 GN=LOC111024986 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-13
Identity = 51/114 (44.74%), Postives = 65/114 (57.02%), Query Frame = 0 

Query: 266 LVIVAGARVYLKGSIELPLTLEKGKEAVTQIDEFVVVDGLSAYNAI-------------- 325
           LV  +G R++L+GSIELPLTL +GKE VT+I+EF+V+DGL AYN I              
Sbjct: 159 LVGFSGERLHLEGSIELPLTLGEGKEDVTRIEEFMVIDGLLAYNTILGRLAIHNIRAVPF 218

Query: 326 ----------------LDGQQQASRECYVTVMREPKTIYAINVQGKHPKPGSPT 350
                           LD QQ+AS ECY T M+EPK + AIN+    P+P S T
Sbjct: 219 TYHQTMKFPTLNEMRTLDEQQRASEECYATTMKEPKIVGAINILEGEPEPDSST 272

[Close]
BLAST of Moc04g11130 vs. ExPASy TrEMBL
Match: A0A5A7UAF5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001500 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-08
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 0 

Query: 74  QANDKAKVHILASISDVLAKKHESMVTVI-------NDTVINEGSQISFILESLPKSFLP 133
           + NDKA+V+ILAS+SD+L+KKHE MVT +       N+TV +E SQ+SFIL+SLPKSFL 
Sbjct: 37  KTNDKARVYILASMSDILSKKHEIMVTALHFNVVEMNETVFDEKSQVSFILKSLPKSFLQ 96

Query: 134 QQCYDEQDRVQ 138
                E ++V+
Sbjct: 97  FHSNAEMNKVE 107

[Close]
BLAST of Moc04g11130 vs. ExPASy TrEMBL
Match: A0A5A7TJT4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00100 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.8e-08
Identity = 63/196 (32.14%), Postives = 91/196 (46.43%), Query Frame = 0 

Query: 74  QANDKAKVHILASISDVLAKKHESMVTV-------------------------------- 133
           + NDKA+++ILAS+SD+L+KKHE MVT                                 
Sbjct: 37  KVNDKARLYILASMSDILSKKHEIMVTARQIMDSFREMFGQPSIQIKQEAIKYVYNARMK 96

Query: 134 --------------------INDTVINEGSQISFILESLPKSFLPQQCYDEQDRVQPYH- 193
                               +N  V +E SQ+S+IL+SL KSFL  +   E +++  Y+ 
Sbjct: 97  EGQSVTEHVLDIIINFNVVEMNGKVFDEKSQVSYILKSLSKSFLQFRSNTEINKID-YNM 156

Query: 194 --ALK--SKPFKKKNSGKGMKADPIATAATKKGKPKLQTKENISAATWMGTGKETARNNW 213
              LK  SK  +KK  GKG     IA     KGK K+ ++ENIS A WM   KET  +  
Sbjct: 157 TTLLKELSKKIQKKKGGKGKGHTSIAEG---KGKAKVASRENISTAMWMDIRKETTLSTL 216

[Close]
BLAST of Moc04g11130 vs. ExPASy TrEMBL
Match: A0A5D3BDY3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00250 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.5e-08
Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 0 

Query: 57  PAAMGAVWARAPRQQMDQANDKAKVHILASISDVLAKKHESMVTV--------------- 116
           P A      R   ++  +AN+KA+ +ILAS+S+VL KKHESM+T                
Sbjct: 14  PTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAPSVREHVLNMMVHFN 73

Query: 117 ---INDTVINEGSQISFILESLPKSFLPQQCYDEQDRVQPYH------------ALKSKP 169
              +N  VI+E S++SFILESLP+SFL    +  +  +  +H            +  +K 
Sbjct: 74  VVGMNGAVIDEASRVSFILESLPESFLQ---FRSKAVMNKFHRGSTSGTKSVPSSSGNKK 133

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BLAST of Moc04g11130 vs. ExPASy TrEMBL
Match: A0A5A7SWF4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00290 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.5e-08
Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 0 

Query: 57  PAAMGAVWARAPRQQMDQANDKAKVHILASISDVLAKKHESMVTV--------------- 116
           P A      R   ++  +AN+KA+ +ILAS+S+VL KKHESM+T                
Sbjct: 14  PTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAPSVREHVLNMMVHFN 73

Query: 117 ---INDTVINEGSQISFILESLPKSFLPQQCYDEQDRVQPYH------------ALKSKP 169
              +N  VI+E S++SFILESLP+SFL    +  +  +  +H            +  +K 
Sbjct: 74  VVGMNGAVIDEASRVSFILESLPESFLQ---FRSKAVMNKFHRGSTSGTKSVPSSSGNKK 133

The following BLAST results are available for this feature:
BLAST of Moc04g11130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158513.12.1e-1344.74uncharacterized protein LOC111024986 [Momordica charantia][more]
KAA0051407.13.5e-0853.52gag/pol protein [Cucumis melo var. makuwa][more]
KAA0041821.17.9e-0832.14gag/pol protein [Cucumis melo var. makuwa] >TYK05343.1 gag/pol protein [Cucumis ... [more]
TYJ96675.11.8e-0736.62gag/pol protein [Cucumis melo var. makuwa][more]
KAA0034863.11.8e-0736.62gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Moc04g11130 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc04g11130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DWB01.0e-1344.74uncharacterized protein LOC111024986 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5A7UAF51.7e-0853.52Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00150... [more]
A0A5A7TJT43.8e-0832.14Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00100... [more]
A0A5D3BDY38.5e-0836.62Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G0025... [more]
A0A5A7SWF48.5e-0836.62Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G0029... [more]
BLAST of Moc04g11130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..366

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g11130.1Moc04g11130.1mRNA