Moc04g10980 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g10980
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr4: 8231640 .. 8235246 (+)
RNA-Seq ExpressionMoc04g10980
SyntenyMoc04g10980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGGGGGTAGGGGCATGCGTTGGTGGGCGTGGGTGCACGATAGAGGGAATGCATTGGTGGGCATGCAGAAGGAGGCGCACGGAGGGTGTGCAATAGGGGGCGTTGGCATACACGTAGGGACTGCTAAAGTATCTCTCTCTTCTTTTCCTTTTTTTTTAATATTGTTTATATAAATCTTTAAATTATTTTTTAGATAATAAATCTTCAAATTATTAGTAATTATAAATTAAAATAAGAAAATTTTTTATCCGTTCTTTTGGGATTTGAAAGATATTTTGAATAGATTCTTGATTCTCTTTGAGATGATGTGAATGATACCTCTATTTATAAAGTCTTTTAGGGCCTCAAATGGATTTGAGTGGGTATTTGGAACTTTGTGCTAATTTAAGCCTTGCTAATTTGAACCTTTCGTTAATTTGAGCCTCATAGAATTTTTAATATGTTTAATTTAATTTAAAGACACTTGTCAAATTCTAATTGTTCTCGATTTAATGGCATATAATTTGTTATTATTATGTGGCAATTTATGATTGATCAAAATTTATGGTTCAAGATCTATAACACAAACAAGTTTCTTGTTAATTGCTTCGATTAATGATTTCTCACTATTTAATTCAACTATTTCGTTACCTTTTACATTTACGACCTATATTGGTTTGATTAGTTAAAATGCAAAAACAATATTTTTTTTTTGCGTATTGGTTTAGAGAGAGAGTATTTACCTTTGTTATGGGTGAAATTAAATCTTACGAGTCATGTGCATGAACCACATGAGTCAAGATCAGGAATGTAGATCAACGGATCGAGCCTCGAAGACCTAAAGGCCTGAACAGAATCTCGAGAACCAAGGCTTGATAAGCTTACTAGATCATGAGTTGTACTCTGAAGGTTGAGGCCCAAAGATAAGGCAAGCCCAAAGCTAGCGCCATGGCTCAGTTGGTTAGCCCGAGACCGACCTTTGGCCGAGATCCAAGAGTGCTCATCCTGAGCTCAATGATTCCTTCAAGTGTTGTTAAACCCTCTTGACTATAAGTTTTCCTATCTTTTAATAGAGAGAAAAGACATATAAAGAAGGTACGTGTTAACGATTTTAAACCTTTGTGCAAGTGTACACAAATCGAGTAGCAAATGATAAAAAGATCGGACCCACAAGGATGAATTTACTAAACACTTCACTAATTACTCAAGAAGTAGAAAAGCAAATAAAATGTAGTTTGATGTTTAACTAATTGTTGCTATGTAGGTAAACATGCATAAATCTTGAAATAAAGGTACTAGGAATAACCTGATTTTCAGCTTAAGATCACGAGACACAAATGAGAAGCTAAGATTCAAACGATAAGGTAGAAGAGGGGGGGGGGGGTTGTTTATTTTACTTTGACGCCACTAAACGATGCTCCAGTAACAAGGATGTTAATGTTACTGGCCAAACTAACACGACATCTTTCCAGATTGCCTAGATTCAACGCTATTCTGATTTAACTTAGAACAAAATTGATTTAGCTAAGTTTTTAACCATGGTAGACATGTATTATTCCTAAGTATCAACACATTAGATTCAAATGTAGATCTAGCACAAGTTAAAGCCACTCACTCTCTATTACAATTTCCCAAAAGTTAATAAAGAGCATCCAATATGGTGATCAAACATGTAAACAGACTTTAAAAGAAAAAGAAGAACTATCAAATTCATTTACTAATTAATAAAAAAGAAGAAAGAATAAAAGAAATCAGTAACTTCATGCTCTAAACTGCTCCTTCGGTGCTTCATCTAGTTCTTCAAGGTATCTCTCTTTGTCTTTTCGTGCTCTAGGGATTTGTGTGGAGTGAAAGGATTGAATCGAATGGAATGTTGTAGGCAGTCTTTAATGTTAGCTTTTATACCATCCTTAATTTTAGGGCAACAAAATAGATAAAGTAGGGTCGAGCTCGAATTTCAGGTGCTTGCTTCATTGCTAATGTTGTAACTCTTGGGTGACAATGTGTCGCTTTCAGCTCTCTATCTTTTCTGTTTTTGGCTCCAATGCCCGACATCAATAATATTGCCACAAAACATTGAAAGTTAGAACTAATTCGCAATAAGTCACAACATTGCTAGTGATGCAAGATCACTTTGAACTTTCATATACTAAGCCTAAGACAATGGTAATTGGAGCTTCTTTGTAAAATTTCTTATCTACCCAAGATATTTTTCCTCTAAAATAACTCTGTTATGGAGAGTTTTCAATACGTTACAAAATCCTACTTCTCTCAATTTTAACTTAAACATTGGAATGTGTGTGGCTAGCACTATAGCGACGTGTAACATTTATAGTTTGCAAGGTTTCATCGAATCTTTTTCTTAAAAAGAATTGGTGTCAATTTGGTAATTATGTTAGGCCAAATTTACGCATCAATATACCTCATAATGATTCTCTTCCAATATGTACAAAAATGCAAATTTGAAGCAACAACTTCTTTAGATTTTTGCAAGTCAAAATAAATTAAATTTTTTTTAATGATATTAACCATCTTATTCAACCCTTAAATTGTAGCAACTCTGACAAATGGTCCACGTTTCTGCATTCAATTATTATATTTGTTAAAATAAGATTTTGATTATTTATCATCATGTATACATAGATAGTCTAAGAGATATATCGTAGATTTACCACCCCCATCAATGTTCAAATTTGTTATGGGCTAAATAAATAGAACCCGACAAAGCAACCGGCCGGGTATGCGAAGGGCCAACAACTCGAACCAACAGGTTTAGACCAAGCAGGCCCAAGACACTTGGGTCGAGCTAGGCTCGATGCCGATCCTTGCTCGGTACCGAGCAGCCCTCGACCTAATGATGACTGCTATATCCTGCATGATTTGTATGATTTGTGTGAGACGACTTCTCCTAAACACCTCAGGGTTGAACCTACGTAAATCTTGAGGGAATTAGGTTTAAACCCTTATAAATAGAGAGGCAAGTGAAGCCCTAGAGGTAAGCCTGATCCTCCATTATCCATACACTATTACTCCAAATACTAACTTAAGCATCAGAGCGTGTGTGGCAGGAGCCACATCGGTTTGAGTGCTATTATGTTTTGTAGGTTTTGTCGATCCCGTTAATTTTGGTAGATTGGTGCAAGTTTGGCGAAATTCACGGAGGTCAAATTTCTGCATCAACAATTGGTGCCGTCTGTGGGGACGACTAGAGATTGAAGATATGTCGACATGAGTTCGGGAAGGAGTCCACAACTTTCTGATAAAGAGTGTCACCCTAGGAGGAGAGTTAATGGGGATACACATCTGTCCGAGACAATCGAAGGAGAAACCAGCCGACCAGTTTTCGGATAGAAGAATAAACCAATTGAAGTTCTGAATTAACAGGGAGACGAGTTGGTGGCTCTAGAAGAAAAGGTCGAGGGAATGCACCAGAACATATCTCTGCTCCTGCAAAGGCTTGAGCAACATGAAGTGGAACAGCCAGAGCTTATTCGCGATTCGCGGAAGGGTAAAGCTCCGATGATTGAAGGAGTTGGGGAATCAACCAACTATGCACAGAGCAAACTAAAGATAAGAGGAAACGACGGACCTCGAGCCAGTGTCTTCGACCGGCTAGGCCAGTAA

mRNA sequence

ATGCACGGGGGTAGGGGCATGCGTTGGTGGGCGTGGGTGCACGATAGAGGGAATGCATTGGTGGGCATGCAGAAGGAGGCGCACGGAGGGTGTGCAATAGGGGGCGTTGGCATACACGGAGACGAGTTGGTGGCTCTAGAAGAAAAGGTCGAGGGAATGCACCAGAACATATCTCTGCTCCTGCAAAGGCTTGAGCAACATGAAGTGGAACAGCCAGAGCTTATTCGCGATTCGCGGAAGGGTAAAGCTCCGATGATTGAAGGAGTTGGGGAATCAACCAACTATGCACAGAGCAAACTAAAGATAAGAGGAAACGACGGACCTCGAGCCAGTGTCTTCGACCGGCTAGGCCAGTAA

Coding sequence (CDS)

ATGCACGGGGGTAGGGGCATGCGTTGGTGGGCGTGGGTGCACGATAGAGGGAATGCATTGGTGGGCATGCAGAAGGAGGCGCACGGAGGGTGTGCAATAGGGGGCGTTGGCATACACGGAGACGAGTTGGTGGCTCTAGAAGAAAAGGTCGAGGGAATGCACCAGAACATATCTCTGCTCCTGCAAAGGCTTGAGCAACATGAAGTGGAACAGCCAGAGCTTATTCGCGATTCGCGGAAGGGTAAAGCTCCGATGATTGAAGGAGTTGGGGAATCAACCAACTATGCACAGAGCAAACTAAAGATAAGAGGAAACGACGGACCTCGAGCCAGTGTCTTCGACCGGCTAGGCCAGTAA

Protein sequence

MHGGRGMRWWAWVHDRGNALVGMQKEAHGGCAIGGVGIHGDELVALEEKVEGMHQNISLLLQRLEQHEVEQPELIRDSRKGKAPMIEGVGESTNYAQSKLKIRGNDGPRASVFDRLGQ
Homology
[Close]
BLAST of Moc04g10980 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-06
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0 

Query: 42  ELVALEEKVEGMHQNISLLLQRLEQHEVEQPELIRDSRKGKAPMIEGVGESTNYAQSKLK 101
           +   LE+KVEGM Q ++ +L++ E+ E ++  L+RD RKGK P      ESTN A SKL+
Sbjct: 60  QFAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLR 119

Query: 102 IRGNDGPRASVFD 115
           I GN   R  +FD
Sbjct: 120 IGGNTRRRTQIFD 132

[Close]
BLAST of Moc04g10980 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.1e-07
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0 

Query: 42  ELVALEEKVEGMHQNISLLLQRLEQHEVEQPELIRDSRKGKAPMIEGVGESTNYAQSKLK 101
           +   LE+KVEGM Q ++ +L++ E+ E ++  L+RD RKGK P      ESTN A SKL+
Sbjct: 60  QFAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLR 119

Query: 102 IRGNDGPRASVFD 115
           I GN   R  +FD
Sbjct: 120 IGGNTRRRTQIFD 132

The following BLAST results are available for this feature:
BLAST of Moc04g10980 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145129.11.0e-0645.21uncharacterized protein LOC111014646 [Momordica charantia][more]
BLAST of Moc04g10980 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc04g10980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CUA75.1e-0745.21uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
BLAST of Moc04g10980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g10980.1Moc04g10980.1mRNA