Moc04g09280 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCGTACGATTTACAGTCCTTGCCCTAATGGCGCTCATACTGATAACCTCCGCCGCCGCTCAGTCTCCGAAGAAACATTCGCACGCCGCTTCTCCTTCGCCGGCCGCCGATTCGCCTAGGGTTTCGCCGAAATCCGCGCCGTCGCCGGCCACCGGTAAGCATTCTCTCGCTGGTCCGCCTTCGTCTTCTCCGTCACCGGCCCTCCCTCCATCCTCCATCTCCTCCCCTCCCGCCGATGCTCCGGCTGCTGCCGGAAACACTGCTGCTTCCAATTCTTTCGCCGTCGCCGGTTCTCTCTTCGCCGCGGCTTTCCTCATGTAG ATGGCTTCCGTACGATTTACAGTCCTTGCCCTAATGGCGCTCATACTGATAACCTCCGCCGCCGCTCAGTCTCCGAAGAAACATTCGCACGCCGCTTCTCCTTCGCCGGCCGCCGATTCGCCTAGGGTTTCGCCGAAATCCGCGCCGTCGCCGGCCACCGGTAAGCATTCTCTCGCTGGTCCGCCTTCGTCTTCTCCGTCACCGGCCCTCCCTCCATCCTCCATCTCCTCCCCTCCCGCCGATGCTCCGGCTGCTGCCGGAAACACTGCTGCTTCCAATTCTTTCGCCGTCGCCGGTTCTCTCTTCGCCGCGGCTTTCCTCATGTAG ATGGCTTCCGTACGATTTACAGTCCTTGCCCTAATGGCGCTCATACTGATAACCTCCGCCGCCGCTCAGTCTCCGAAGAAACATTCGCACGCCGCTTCTCCTTCGCCGGCCGCCGATTCGCCTAGGGTTTCGCCGAAATCCGCGCCGTCGCCGGCCACCGGTAAGCATTCTCTCGCTGGTCCGCCTTCGTCTTCTCCGTCACCGGCCCTCCCTCCATCCTCCATCTCCTCCCCTCCCGCCGATGCTCCGGCTGCTGCCGGAAACACTGCTGCTTCCAATTCTTTCGCCGTCGCCGGTTCTCTCTTCGCCGCGGCTTTCCTCATGTAG MASVRFTVLALMALILITSAAAQSPKKHSHAASPSPAADSPRVSPKSAPSPATGKHSLAGPPSSSPSPALPPSSISSPPADAPAAAGNTAASNSFAVAGSLFAAAFLM Homology
BLAST of Moc04g09280 vs. NCBI nr
Match: XP_022141985.1 (classical arabinogalactan protein 1-like [Momordica charantia]) HSP 1 Score: 178.3 bits (451), Expect = 3.5e-41 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Moc04g09280 vs. NCBI nr
Match: KAG7030900.1 (hypothetical protein SDJN02_04937, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 60.8 bits (146), Expect = 8.1e-06 Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 0
BLAST of Moc04g09280 vs. NCBI nr
Match: KAA0061155.1 (classical arabinogalactan protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 60.5 bits (145), Expect = 1.1e-05 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of Moc04g09280 vs. NCBI nr
Match: PQQ16428.1 (classical arabinogalactan protein 1 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 59.3 bits (142), Expect = 2.4e-05 Identity = 56/124 (45.16%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of Moc04g09280 vs. NCBI nr
Match: XP_023542663.1 (classical arabinogalactan protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 58.5 bits (140), Expect = 4.0e-05 Identity = 54/116 (46.55%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of Moc04g09280 vs. ExPASy TrEMBL
Match: A0A6J1CJM5 (classical arabinogalactan protein 1-like OS=Momordica charantia OX=3673 GN=LOC111012223 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Moc04g09280 vs. ExPASy TrEMBL
Match: A0A5A7V5Q9 (Classical arabinogalactan protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00230 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.1e-06 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of Moc04g09280 vs. ExPASy TrEMBL
Match: A0A314ZGT3 (Classical arabinogalactan protein 1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_11060 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05 Identity = 56/124 (45.16%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of Moc04g09280 vs. ExPASy TrEMBL
Match: A0A6J1FW49 (classical arabinogalactan protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447861 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05 Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 0
BLAST of Moc04g09280 vs. ExPASy TrEMBL
Match: A0A6J1E9Q3 (classical arabinogalactan protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430664 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 3.3e-05 Identity = 58/110 (52.73%), Postives = 70/110 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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