Moc04g05830 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g05830
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	organ-specific protein P4-like
Location	chr4: 3974556 .. 3975094 (-)
RNA-Seq Expression	Moc04g05830
Synteny	Moc04g05830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGGCTTCTCTTCCTCACTTTCATCACACTTCTGTTGGTACGCAATTCTATTCCACTCCTACACTACAATTCAACTCATGTTTTAATTTTGAGTAGCATTTATGTGGCCATTTTATTGTGAAATAATATGAAACGATCGATATCGAGATTATTGTATATTGATAAAACTACATCATGCAATTCTTTAATTTGTTTTTTCTTGCTTTGCGCTCTTTGTGTGGCATTTAGTTTGCAAGTACTATAGAATCAAGACATGAGCCAGGAGATCGTCAATGGAGAAATGTGATCGAAGACGAGTCATTACCTGAAGCAATTAAAAGCCTACTTCCTATTCATTCTGAAAAGGAAATGGATTGTAATGAAACTTTAAAGCCTAAAGATGAAAAGCCTTTCGTTAAGGATATCGAGCCTCGACCGCAAGCCTCATTTTATCCAAACGACATCAAAACGAAAGAGTCTGGCAGTGACACCAATGAGAAGCCATTTGCTGAAGATTTTGAGCCAAGACCTAATCTGTCTATCTATAACAACTAA

mRNA sequence

ATGAAGGGGCTTCTCTTCCTCACTTTCATCACACTTCTGTTGTTTGCAAGTACTATAGAATCAAGACATGAGCCAGGAGATCGTCAATGGAGAAATGTGATCGAAGACGAGTCATTACCTGAAGCAATTAAAAGCCTACTTCCTATTCATTCTGAAAAGGAAATGGATTGTAATGAAACTTTAAAGCCTAAAGATGAAAAGCCTTTCGTTAAGGATATCGAGCCTCGACCGCAAGCCTCATTTTATCCAAACGACATCAAAACGAAAGAGTCTGGCAGTGACACCAATGAGAAGCCATTTGCTGAAGATTTTGAGCCAAGACCTAATCTGTCTATCTATAACAACTAA

Coding sequence (CDS)

ATGAAGGGGCTTCTCTTCCTCACTTTCATCACACTTCTGTTGTTTGCAAGTACTATAGAATCAAGACATGAGCCAGGAGATCGTCAATGGAGAAATGTGATCGAAGACGAGTCATTACCTGAAGCAATTAAAAGCCTACTTCCTATTCATTCTGAAAAGGAAATGGATTGTAATGAAACTTTAAAGCCTAAAGATGAAAAGCCTTTCGTTAAGGATATCGAGCCTCGACCGCAAGCCTCATTTTATCCAAACGACATCAAAACGAAAGAGTCTGGCAGTGACACCAATGAGAAGCCATTTGCTGAAGATTTTGAGCCAAGACCTAATCTGTCTATCTATAACAACTAA

Protein sequence

MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNETLKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN

Homology

[Close]

BLAST of Moc04g05830 vs. NCBI nr
Match: XP_022136081.1 (organ-specific protein P4-like [Momordica charantia])

HSP 1 Score: 234.6 bits (597), Expect = 4.4e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNET 60
           MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNET
Sbjct: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNET 60

Query: 61  LKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN 116
           LKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN
Sbjct: 61  LKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN 115

[Close]

BLAST of Moc04g05830 vs. NCBI nr
Match: XP_022136084.1 (uncharacterized protein LOC111007863 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 1.0e-38
Identity = 91/116 (78.45%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 1   MKG-LLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNE 60
           MKG ++F+TF +LLLFAS IESR EPGD+Q RN+I+DE+L EAIK LL  HSEK MDCNE
Sbjct: 1   MKGFVIFITFFSLLLFASRIESRPEPGDQQGRNLIKDEALLEAIKGLLS-HSEKNMDCNE 60

Query: 61  TLKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN 116
           TLKP+DEK FVKDIEPRPQA+FYPNDIKTKESG   NEKPFAEDFEPR NLSIYNN
Sbjct: 61  TLKPEDEKLFVKDIEPRPQATFYPNDIKTKESG--RNEKPFAEDFEPRSNLSIYNN 113

[Close]

BLAST of Moc04g05830 vs. NCBI nr
Match: XP_022952150.1 (uncharacterized protein LOC111454914 isoform X1 [Cucurbita moschata])

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-21
Identity = 68/132 (51.52%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIH-----SEKEM 60
           MKGL+F+ F  L+L A+TIESR+EPGD  WRN I+D+SL E I   +  +     SEKEM
Sbjct: 1   MKGLVFINFFLLILLANTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEM 60

Query: 61  -DCNETLKPKDEKPFVKDIEPRPQASF---------YPNDIKTKESGS----DTNEKPFA 114
            DC  TLK +D K FVK++EPRPQA+F         +  DIK + S S    DT +K  A
Sbjct: 61  EDCTGTLKLEDGKLFVKNLEPRPQATFDSDVVKTKLFSIDIKPRPSASFYPDDTKKKFIA 120

[Close]

BLAST of Moc04g05830 vs. NCBI nr
Match: XP_022952153.1 (organ-specific protein S2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 107.8 bits (268), Expect = 6.1e-20
Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLL-----PIHSEKEM 60
           MKGL+F+ F  L+L A+TIESRHEPGD  WRN I+++ L E I+  +      + SEKE 
Sbjct: 1   MKGLVFINFFLLILLANTIESRHEPGDHHWRNFIDNKLLHEDIEEFIHSDPNSLLSEKET 60

Query: 61  -DCNETLKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIY 114
            DC ETLK +D K FVK++EPRPQA+F  + +KT         K F++D EPRPNLS Y
Sbjct: 61  EDCTETLKIEDGKLFVKNLEPRPQATFDSDVVKT---------KLFSKDIEPRPNLSFY 110

[Close]

BLAST of Moc04g05830 vs. NCBI nr
Match: XP_022972554.1 (uncharacterized protein LOC111471093 [Cucurbita maxima])

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19
Identity = 66/134 (49.25%), Postives = 84/134 (62.69%), Query Frame = 0


Query: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLL-----PIHSEKEM 60
           MKGL+F+ F+ L+L A+TIESRHEPG+  WRN I+D+ L E I+  +      +  EKE 
Sbjct: 1   MKGLVFINFL-LILLANTIESRHEPGNHHWRNFIDDKLLHEEIQEFIHSDPNSLRYEKET 60

Query: 61  -DCNETLKPKDEKPFVKDIEPRPQASF---------YPNDIKTKESGS----DTNEKPFA 116
            DC ETLK +D K FVK+IE RPQA+F         +  DI+ + S S    DT +K  A
Sbjct: 61  EDCTETLKIEDGKLFVKNIESRPQATFDLDIVKTKLFSKDIELRPSASFYPDDTKKKFIA 120

[Close]

BLAST of Moc04g05830 vs. ExPASy TrEMBL
Match: A0A6J1C2I2 (organ-specific protein P4-like OS=Momordica charantia OX=3673 GN=LOC111007861 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.1e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNET 60
           MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNET
Sbjct: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNET 60

Query: 61  LKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN 116
           LKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN
Sbjct: 61  LKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN 115

[Close]

BLAST of Moc04g05830 vs. ExPASy TrEMBL
Match: A0A6J1C3A3 (uncharacterized protein LOC111007863 OS=Momordica charantia OX=3673 GN=LOC111007863 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.9e-39
Identity = 91/116 (78.45%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 1   MKG-LLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNE 60
           MKG ++F+TF +LLLFAS IESR EPGD+Q RN+I+DE+L EAIK LL  HSEK MDCNE
Sbjct: 1   MKGFVIFITFFSLLLFASRIESRPEPGDQQGRNLIKDEALLEAIKGLLS-HSEKNMDCNE 60

Query: 61  TLKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN 116
           TLKP+DEK FVKDIEPRPQA+FYPNDIKTKESG   NEKPFAEDFEPR NLSIYNN
Sbjct: 61  TLKPEDEKLFVKDIEPRPQATFYPNDIKTKESG--RNEKPFAEDFEPRSNLSIYNN 113

[Close]

BLAST of Moc04g05830 vs. ExPASy TrEMBL
Match: A0A6J1GKY7 (uncharacterized protein LOC111454914 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454914 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-21
Identity = 68/132 (51.52%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIH-----SEKEM 60
           MKGL+F+ F  L+L A+TIESR+EPGD  WRN I+D+SL E I   +  +     SEKEM
Sbjct: 1   MKGLVFINFFLLILLANTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEM 60

Query: 61  -DCNETLKPKDEKPFVKDIEPRPQASF---------YPNDIKTKESGS----DTNEKPFA 114
            DC  TLK +D K FVK++EPRPQA+F         +  DIK + S S    DT +K  A
Sbjct: 61  EDCTGTLKLEDGKLFVKNLEPRPQATFDSDVVKTKLFSIDIKPRPSASFYPDDTKKKFIA 120

[Close]

BLAST of Moc04g05830 vs. ExPASy TrEMBL
Match: A0A6J1GJQ3 (organ-specific protein S2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454914 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.0e-20
Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLL-----PIHSEKEM 60
           MKGL+F+ F  L+L A+TIESRHEPGD  WRN I+++ L E I+  +      + SEKE 
Sbjct: 1   MKGLVFINFFLLILLANTIESRHEPGDHHWRNFIDNKLLHEDIEEFIHSDPNSLLSEKET 60

Query: 61  -DCNETLKPKDEKPFVKDIEPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIY 114
            DC ETLK +D K FVK++EPRPQA+F  + +KT         K F++D EPRPNLS Y
Sbjct: 61  EDCTETLKIEDGKLFVKNLEPRPQATFDSDVVKT---------KLFSKDIEPRPNLSFY 110

[Close]

BLAST of Moc04g05830 vs. ExPASy TrEMBL
Match: A0A6J1IBX3 (uncharacterized protein LOC111471093 OS=Cucurbita maxima OX=3661 GN=LOC111471093 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19
Identity = 66/134 (49.25%), Postives = 84/134 (62.69%), Query Frame = 0


Query: 1   MKGLLFLTFITLLLFASTIESRHEPGDRQWRNVIEDESLPEAIKSLL-----PIHSEKEM 60
           MKGL+F+ F+ L+L A+TIESRHEPG+  WRN I+D+ L E I+  +      +  EKE 
Sbjct: 1   MKGLVFINFL-LILLANTIESRHEPGNHHWRNFIDDKLLHEEIQEFIHSDPNSLRYEKET 60

Query: 61  -DCNETLKPKDEKPFVKDIEPRPQASF---------YPNDIKTKESGS----DTNEKPFA 116
            DC ETLK +D K FVK+IE RPQA+F         +  DI+ + S S    DT +K  A
Sbjct: 61  EDCTETLKIEDGKLFVKNIESRPQATFDLDIVKTKLFSKDIELRPSASFYPDDTKKKFIA 120

The following BLAST results are available for this feature:

BLAST of Moc04g05830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136081.1	4.4e-58	100.00	organ-specific protein P4-like [Momordica charantia]	[more]
XP_022136084.1	1.0e-38	78.45	uncharacterized protein LOC111007863 [Momordica charantia]	[more]
XP_022952150.1	2.5e-21	51.52	uncharacterized protein LOC111454914 isoform X1 [Cucurbita moschata]	[more]
XP_022952153.1	6.1e-20	51.26	organ-specific protein S2-like isoform X3 [Cucurbita moschata]	[more]
XP_022972554.1	3.1e-19	49.25	uncharacterized protein LOC111471093 [Cucurbita maxima]	[more]

BLAST of Moc04g05830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g05830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2I2	2.1e-58	100.00	organ-specific protein P4-like OS=Momordica charantia OX=3673 GN=LOC111007861 PE...	[more]
A0A6J1C3A3	4.9e-39	78.45	uncharacterized protein LOC111007863 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1GKY7	1.2e-21	51.52	uncharacterized protein LOC111454914 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GJQ3	3.0e-20	51.26	organ-specific protein S2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1IBX3	1.5e-19	49.25	uncharacterized protein LOC111471093 OS=Cucurbita maxima OX=3661 GN=LOC111471093...	[more]

BLAST of Moc04g05830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PFAM	PF10950	Organ_specific	coord: 25..114 e-value: 6.9E-14 score: 52.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	PANTHER	PTHR33731	PROTEIN, PUTATIVE-RELATED	coord: 4..115
None	No IPR available	PANTHER	PTHR33731:SF2	PROTEIN, PUTATIVE-RELATED	coord: 4..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g05830.1	Moc04g05830.1	mRNA