Moc04g05710 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g05710
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr4: 3890965 .. 3891882 (+)
RNA-Seq Expression	Moc04g05710
Synteny	Moc04g05710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGCGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGTAGGTCGTCACGAATCACCGCGCCTGTCCTACTACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGATCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATACTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCGGAGGGGAGACCTCCGTGAGCATCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACCGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGAGTGATTACAAGGGAGGAGTTCGACCGACTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGGGAATCGCCCTTCACCTCAGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAAGGACCCCAAGGATTATGTTGAGGTCTTTGAAGGCCTCATGGATTTCCAAGCGGCATCAGACGCAATCAAATGCCGCGCCTTTCAGATAGCGCTTACTGGCAGCGCGTGA

mRNA sequence

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGCGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGTAGGTCGTCACGAATCACCGCGCCTGTCCTACTACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGATCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATACTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCGGAGGGGAGACCTCCGTGAGCATCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACCGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGAGTGATTACAAGGGAGGAGTTCGACCGACTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGGGAATCGCCCTTCACCTCAGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAAGGACCCCAAGGATTATGTTGAGGTCTTTGAAGGCCTCATGGATTTCCAAGCGGCATCAGACGCAATCAAATGCCGCGCCTTTCAGATAGCGCTTACTGGCAGCGCGTGA

Coding sequence (CDS)

ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGCGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGTAGGTCGTCACGAATCACCGCGCCTGTCCTACTACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGATCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTATAACGAGATGATACTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCGGAGGGGAGACCTCCGTGAGCATCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACCGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGAGTGATTACAAGGGAGGAGTTCGACCGACTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTGAACGATGGCGACTTGGGGGAATCGCCCTTCACCTCAGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAAGGACCCCAAGGATTATGTTGAGGTCTTTGAAGGCCTCATGGATTTCCAAGCGGCATCAGACGCAATCAAATGCCGCGCCTTTCAGATAGCGCTTACTGGCAGCGCGTGA

Protein sequence

MVQPANSTNTADRRTLAASDAHQREVGAAVVAGQGHDGLATEPLRRSSRITAPVLLPAHPRTSKATRGRGGISKKGARGPAPAPTSENFDALQREMEAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRRRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSA

Homology

[Close]

BLAST of Moc04g05710 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 370.2 bits (949), Expect = 1.8e-98
Identity = 202/305 (66.23%), Postives = 230/305 (75.41%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVGAAVVAGQGHDGLATEPLRRSSRITAPVLLPAHP 60
           MVQP +STNT DRR L A+D HQREVGA VV GQ H+GL TEP  RS+RIT P L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  RTSKATRGRGGISKKGARGPAPAPTSENFDALQREMEAMRTQMRSMEEMYNEMILAAGAG 120
           +  KA RGRGG S++   G APAP+ ENFDALQ+EMEAMRTQM +MEEMYNEM+ A GAG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRRRGDLREHLNRKRGSSLRKGQS 180
           SRSE+R  R +                            RGDLR+HL+RKR SSLRKG+S
Sbjct: 121 SRSEDRAARDE----------------------------RGDLRDHLSRKRSSSLRKGRS 180

Query: 181 PSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLDAQVEALKAKCEQKEGSLNDGDL 240
           PS SH++SNQQAESS+NP  P GVITREEFD+L+ + DAQVE LKA+CE K  + +DGDL
Sbjct: 181 PSCSHKNSNQQAESSYNPVVPEGVITREEFDQLKSKFDAQVETLKARCEVKGSTFDDGDL 240

Query: 241 GESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAASDAIKCRAFQIA 300
           GESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEVFEGLM FQAA+DAIK RAFQIA
Sbjct: 241 GESPFTSDILEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMGFQAATDAIKYRAFQIA 277

Query: 301 LTGSA 306
           LT SA
Sbjct: 301 LTSSA 277

[Close]

BLAST of Moc04g05710 vs. NCBI nr
Match: XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])

HSP 1 Score: 310.5 bits (794), Expect = 1.7e-80
Identity = 162/207 (78.26%), Postives = 182/207 (87.92%), Query Frame = 0


Query: 99  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTR 158
           MRTQM +ME+MY+EM+ AAGA SRSENR+ R D+ EQRG HLGPV++ HPE  E E +T 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 RRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLD 218
           +RGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP GVITREEFD+L+ + D
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPEGVITREEFDQLKSKFD 120

Query: 219 AQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEV 278
           AQVEALKAKCE+KE S +DGDLGESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEV
Sbjct: 121 AQVEALKAKCEKKESSFDDGDLGESPFTSDILEALIPLKFKTPTMKPYDGSKDPKDYVEV 180

Query: 279 FEGLMDFQAASDAIKCRAFQIALTGSA 306
           FEGLMDFQAA+DAIKCR FQIALTGSA
Sbjct: 181 FEGLMDFQAATDAIKCRDFQIALTGSA 207

[Close]

BLAST of Moc04g05710 vs. NCBI nr
Match: XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 8.8e-66
Identity = 140/210 (66.67%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 96  MEAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEG 155
           MEAMRTQMR+MEEMYN+M+  AGA SRS +++   D+ EQ   H  PV+EEH        
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEH-------- 60

Query: 156 HTRRRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRG 215
                GDLR+HLNRKR SS R  ++ +  H++SNQQAESS+NP  P GVITREEF++L+ 
Sbjct: 61  ---LGGDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPEGVITREEFNQLKS 120

Query: 216 QLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDY 275
           + DAQVEALK +CE+KE + +DGDLGESPFTSD+LEA IPPKFK PT+K YDGSKDPKDY
Sbjct: 121 KFDAQVEALKVRCEKKESAFDDGDLGESPFTSDILEASIPPKFKTPTMKSYDGSKDPKDY 180

Query: 276 VEVFEGLMDFQAASDAIKCRAFQIALTGSA 306
           VEVFEGLMDFQAA+DAIKCRAFQIALTGSA
Sbjct: 181 VEVFEGLMDFQAATDAIKCRAFQIALTGSA 199

[Close]

BLAST of Moc04g05710 vs. NCBI nr
Match: XP_022152033.1 (uncharacterized protein LOC111019842 [Momordica charantia])

HSP 1 Score: 251.9 bits (642), Expect = 7.0e-63
Identity = 129/136 (94.85%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 170 KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLDAQVEALKAKCE 229
           +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFD+LRG+LDAQVEALKAKCE
Sbjct: 28  QRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCE 87

Query: 230 QKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAAS 289
           QKEGSLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS+DPKDYVEVFEGLMDFQAAS
Sbjct: 88  QKEGSLNDGDLGESPFTSDVLEAPIPXKFKAPTVKPYDGSRDPKDYVEVFEGLMDFQAAS 147

Query: 290 DAIKCRAFQIALTGSA 306
           D IKCRAFQIALT SA
Sbjct: 148 DTIKCRAFQIALTDSA 163

[Close]

BLAST of Moc04g05710 vs. NCBI nr
Match: XP_022158652.1 (uncharacterized protein LOC111025109 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 3.2e-60
Identity = 126/138 (91.30%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 168 NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLDAQVEALKAK 227
           + KRGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITREEFD+LRG+LDAQVEALKAK
Sbjct: 3   HEKRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAK 62

Query: 228 CEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQA 287
           CEQK+ SLNDGDLGE PFTSDVLEAPIPPKFKAPTVKPYDG+KDPKDYVEVFEGLMDFQA
Sbjct: 63  CEQKDDSLNDGDLGEPPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQA 122

Query: 288 ASDAIKCRAFQIALTGSA 306
           ASDAIKCRAFQIALTGSA
Sbjct: 123 ASDAIKCRAFQIALTGSA 137

[Close]

BLAST of Moc04g05710 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 8.5e-99
Identity = 202/305 (66.23%), Postives = 230/305 (75.41%), Query Frame = 0


Query: 1   MVQPANSTNTADRRTLAASDAHQREVGAAVVAGQGHDGLATEPLRRSSRITAPVLLPAHP 60
           MVQP +STNT DRR L A+D HQREVGA VV GQ H+GL TEP  RS+RIT P L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  RTSKATRGRGGISKKGARGPAPAPTSENFDALQREMEAMRTQMRSMEEMYNEMILAAGAG 120
           +  KA RGRGG S++   G APAP+ ENFDALQ+EMEAMRTQM +MEEMYNEM+ A GAG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTRRRGDLREHLNRKRGSSLRKGQS 180
           SRSE+R  R +                            RGDLR+HL+RKR SSLRKG+S
Sbjct: 121 SRSEDRAARDE----------------------------RGDLRDHLSRKRSSSLRKGRS 180

Query: 181 PSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLDAQVEALKAKCEQKEGSLNDGDL 240
           PS SH++SNQQAESS+NP  P GVITREEFD+L+ + DAQVE LKA+CE K  + +DGDL
Sbjct: 181 PSCSHKNSNQQAESSYNPVVPEGVITREEFDQLKSKFDAQVETLKARCEVKGSTFDDGDL 240

Query: 241 GESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAASDAIKCRAFQIA 300
           GESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEVFEGLM FQAA+DAIK RAFQIA
Sbjct: 241 GESPFTSDILEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMGFQAATDAIKYRAFQIA 277

Query: 301 LTGSA 306
           LT SA
Sbjct: 301 LTSSA 277

[Close]

BLAST of Moc04g05710 vs. ExPASy TrEMBL
Match: A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 8.0e-81
Identity = 162/207 (78.26%), Postives = 182/207 (87.92%), Query Frame = 0


Query: 99  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTR 158
           MRTQM +ME+MY+EM+ AAGA SRSENR+ R D+ EQRG HLGPV++ HPE  E E +T 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 RRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLD 218
           +RGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP GVITREEFD+L+ + D
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPEGVITREEFDQLKSKFD 120

Query: 219 AQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEV 278
           AQVEALKAKCE+KE S +DGDLGESPFTSD+LEA IP KFK PT+KPYDGSKDPKDYVEV
Sbjct: 121 AQVEALKAKCEKKESSFDDGDLGESPFTSDILEALIPLKFKTPTMKPYDGSKDPKDYVEV 180

Query: 279 FEGLMDFQAASDAIKCRAFQIALTGSA 306
           FEGLMDFQAA+DAIKCR FQIALTGSA
Sbjct: 181 FEGLMDFQAATDAIKCRDFQIALTGSA 207

[Close]

BLAST of Moc04g05710 vs. ExPASy TrEMBL
Match: A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 4.3e-66
Identity = 140/210 (66.67%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 96  MEAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEG 155
           MEAMRTQMR+MEEMYN+M+  AGA SRS +++   D+ EQ   H  PV+EEH        
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEH-------- 60

Query: 156 HTRRRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRG 215
                GDLR+HLNRKR SS R  ++ +  H++SNQQAESS+NP  P GVITREEF++L+ 
Sbjct: 61  ---LGGDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPEGVITREEFNQLKS 120

Query: 216 QLDAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDY 275
           + DAQVEALK +CE+KE + +DGDLGESPFTSD+LEA IPPKFK PT+K YDGSKDPKDY
Sbjct: 121 KFDAQVEALKVRCEKKESAFDDGDLGESPFTSDILEASIPPKFKTPTMKSYDGSKDPKDY 180

Query: 276 VEVFEGLMDFQAASDAIKCRAFQIALTGSA 306
           VEVFEGLMDFQAA+DAIKCRAFQIALTGSA
Sbjct: 181 VEVFEGLMDFQAATDAIKCRAFQIALTGSA 199

[Close]

BLAST of Moc04g05710 vs. ExPASy TrEMBL
Match: A0A6J1DDS5 (uncharacterized protein LOC111019842 OS=Momordica charantia OX=3673 GN=LOC111019842 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 3.4e-63
Identity = 129/136 (94.85%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 170 KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLDAQVEALKAKCE 229
           +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFD+LRG+LDAQVEALKAKCE
Sbjct: 28  QRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRGKLDAQVEALKAKCE 87

Query: 230 QKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQAAS 289
           QKEGSLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS+DPKDYVEVFEGLMDFQAAS
Sbjct: 88  QKEGSLNDGDLGESPFTSDVLEAPIPXKFKAPTVKPYDGSRDPKDYVEVFEGLMDFQAAS 147

Query: 290 DAIKCRAFQIALTGSA 306
           D IKCRAFQIALT SA
Sbjct: 148 DTIKCRAFQIALTDSA 163

[Close]

BLAST of Moc04g05710 vs. ExPASy TrEMBL
Match: A0A6J1DXR9 (uncharacterized protein LOC111025109 OS=Momordica charantia OX=3673 GN=LOC111025109 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 126/138 (91.30%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 168 NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDRLRGQLDAQVEALKAK 227
           + KRGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITREEFD+LRG+LDAQVEALKAK
Sbjct: 3   HEKRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGIITREEFDQLRGELDAQVEALKAK 62

Query: 228 CEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQA 287
           CEQK+ SLNDGDLGE PFTSDVLEAPIPPKFKAPTVKPYDG+KDPKDYVEVFEGLMDFQA
Sbjct: 63  CEQKDDSLNDGDLGEPPFTSDVLEAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQA 122

Query: 288 ASDAIKCRAFQIALTGSA 306
           ASDAIKCRAFQIALTGSA
Sbjct: 123 ASDAIKCRAFQIALTGSA 137

The following BLAST results are available for this feature:

BLAST of Moc04g05710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159327.1	1.8e-98	66.23	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022151719.1	1.7e-80	78.26	uncharacterized protein LOC111019634 [Momordica charantia]	[more]
XP_022156088.1	8.8e-66	66.67	uncharacterized protein LOC111023060 [Momordica charantia]	[more]
XP_022152033.1	7.0e-63	94.85	uncharacterized protein LOC111019842 [Momordica charantia]	[more]
XP_022158652.1	3.2e-60	91.30	uncharacterized protein LOC111025109 [Momordica charantia]	[more]

BLAST of Moc04g05710 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g05710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZJ1	8.5e-99	66.23	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDW5	8.0e-81	78.26	uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DPN4	4.3e-66	66.67	uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DDS5	3.4e-63	94.85	uncharacterized protein LOC111019842 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DXR9	1.6e-60	91.30	uncharacterized protein LOC111025109 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc04g05710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g05710.1	Moc04g05710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane