Moc04g05630 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g05630
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein RADIALIS-like 1
Location	chr4: 3810468 .. 3810701 (-)
RNA-Seq Expression	Moc04g05630
Synteny	Moc04g05630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATGTCTGCTCATGGGTCGGATGGTGCATGGAGTGCAATGCAAAACAAGGCGTTTGAAAGGGCTTTGGCAGTGTATGATGAAGACACACCTCAGCGATGGCTGAATGTTGCAAATGCCATTGGTGGCAAAACTGAAGAGGAAGTCAATAGGCACTACCAGCTTCTTGTGGAGGATGTTAAGAATATTGAGTCTGGTGAAGTTTCTTTCCCCTCCAGAAGCCAATAA

mRNA sequence

ATGGCTTCAATGTCTGCTCATGGGTCGGATGGTGCATGGAGTGCAATGCAAAACAAGGCGTTTGAAAGGGCTTTGGCAGTGTATGATGAAGACACACCTCAGCGATGGCTGAATGTTGCAAATGCCATTGGTGGCAAAACTGAAGAGGAAGTCAATAGGCACTACCAGCTTCTTGTGGAGGATGTTAAGAATATTGAGTCTGGTGAAGTTTCTTTCCCCTCCAGAAGCCAATAA

Coding sequence (CDS)

ATGGCTTCAATGTCTGCTCATGGGTCGGATGGTGCATGGAGTGCAATGCAAAACAAGGCGTTTGAAAGGGCTTTGGCAGTGTATGATGAAGACACACCTCAGCGATGGCTGAATGTTGCAAATGCCATTGGTGGCAAAACTGAAGAGGAAGTCAATAGGCACTACCAGCTTCTTGTGGAGGATGTTAAGAATATTGAGTCTGGTGAAGTTTCTTTCCCCTCCAGAAGCCAATAA

Protein sequence

MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVEDVKNIESGEVSFPSRSQ

Homology

[Close]

BLAST of Moc04g05630 vs. NCBI nr
Match: XP_022135933.1 (transcription factor RADIALIS-like [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 7.7e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE
Sbjct: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60

Query: 61 DVKNIESGEVSFPSRSQ 78
          DVKNIESGEVSFPSRSQ
Sbjct: 61 DVKNIESGEVSFPSRSQ 77

[Close]

BLAST of Moc04g05630 vs. NCBI nr
Match: XP_022136072.1 (protein RADIALIS-like 1 [Momordica charantia])

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEV RHYQLLVE
Sbjct: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKNIESGEVSFPSRS 77
          DVK+IESGEV FP RS
Sbjct: 61 DVKHIESGEVPFPYRS 76

[Close]

BLAST of Moc04g05630 vs. NCBI nr
Match: XP_022136067.1 (protein RADIALIS-like 1 [Momordica charantia])

HSP 1 Score: 129.8 bits (325), Expect = 1.0e-26
Identity = 66/75 (88.00%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASMSAHGS G+W+AMQNKAFERALAVYDEDTPQRWLNVA AIG KTEEEV RHYQLLVE
Sbjct: 1  MASMSAHGS-GSWTAMQNKAFERALAVYDEDTPQRWLNVAKAIGEKTEEEVKRHYQLLVE 60

Query: 61 DVKNIESGEVSFPSR 76
          DVK+IE GEVSFP R
Sbjct: 61 DVKHIEFGEVSFPYR 74

[Close]

BLAST of Moc04g05630 vs. NCBI nr
Match: XP_022952074.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572044.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011711.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.1 bits (318), Expect = 6.6e-26
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASMSAHGS G+W+A QNKAFE+ALAVYD+DTP+RWLNVA AIGGKTEEEV RHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKNIESGEVSFP 74
          DVK IESGEV FP
Sbjct: 61 DVKQIESGEVPFP 73

[Close]

BLAST of Moc04g05630 vs. NCBI nr
Match: KAA0036165.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 124.4 bits (311), Expect = 4.3e-25
Identity = 59/75 (78.67%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASM+AHG    W+A QNKAFE+ALAVYD+DTP+RWLNVA AIGGKTEEEV RHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKNIESGEVSFPSR 76
          DVK+IESGE+ FP R
Sbjct: 61 DVKHIESGEIPFPYR 75

[Close]

BLAST of Moc04g05630 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.6e-21
Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 5  SAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVEDVKN 64
          S  GS   WSA +NKAFERALAVYD+DTP RW NVA A+ G+T EEV +HY++LVED+K 
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGEVSFPS 75
          IESG+V FP+
Sbjct: 63 IESGKVPFPN 72

[Close]

BLAST of Moc04g05630 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 2  ASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVED 61
          +SMS+  S G+W+A QNKAFE+ALA YD+DTP RW NVA  +GGKT EEV RHY+LLV+D
Sbjct: 4  SSMSSQ-SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKNIESGEVSFPS 75
          + +IE+G V FP+
Sbjct: 64 INSIENGHVPFPN 75

[Close]

BLAST of Moc04g05630 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-20
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 3  SMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVEDV 62
          SMS++GS G+W+  QNKAFERALAVYD+DTP RW NVA A+GGKT EE  R Y LLV D+
Sbjct: 5  SMSSYGS-GSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KNIESGEVSFP 74
          ++IE+G V FP
Sbjct: 65 ESIENGHVPFP 74

[Close]

BLAST of Moc04g05630 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-18
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MAS ++  S   W+  QNK FERALAVYD+DTP RW NVA A+GGKT EEV RHY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKNIESGEVSFPS 75
          D+ NIE+G V  P+
Sbjct: 61 DLINIETGRVPLPN 73

[Close]

BLAST of Moc04g05630 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.6e-17
Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MAS S   S  +W+  +NK FERALA YD+DTP RW NVA A+GGK+ EEV RHY+LL+ 
Sbjct: 1  MASNSM-SSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIR 60

Query: 61 DVKNIESGEVSFPS 75
          DV +IESG    P+
Sbjct: 61 DVNDIESGRYPHPN 73

[Close]

BLAST of Moc04g05630 vs. ExPASy TrEMBL
Match: A0A6J1C686 (transcription factor RADIALIS-like OS=Momordica charantia OX=3673 GN=LOC111007765 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.7e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE
Sbjct: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60

Query: 61 DVKNIESGEVSFPSRSQ 78
          DVKNIESGEVSFPSRSQ
Sbjct: 61 DVKNIESGEVSFPSRSQ 77

[Close]

BLAST of Moc04g05630 vs. ExPASy TrEMBL
Match: A0A6J1C4J2 (protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007855 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.1e-32
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEV RHYQLLVE
Sbjct: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKNIESGEVSFPSRS 77
          DVK+IESGEV FP RS
Sbjct: 61 DVKHIESGEVPFPYRS 76

[Close]

BLAST of Moc04g05630 vs. ExPASy TrEMBL
Match: A0A6J1C4I7 (protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007851 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.9e-27
Identity = 66/75 (88.00%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASMSAHGS G+W+AMQNKAFERALAVYDEDTPQRWLNVA AIG KTEEEV RHYQLLVE
Sbjct: 1  MASMSAHGS-GSWTAMQNKAFERALAVYDEDTPQRWLNVAKAIGEKTEEEVKRHYQLLVE 60

Query: 61 DVKNIESGEVSFPSR 76
          DVK+IE GEVSFP R
Sbjct: 61 DVKHIEFGEVSFPYR 74

[Close]

BLAST of Moc04g05630 vs. ExPASy TrEMBL
Match: A0A6J1GKK4 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.2e-26
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASMSAHGS G+W+A QNKAFE+ALAVYD+DTP+RWLNVA AIGGKTEEEV RHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKNIESGEVSFP 74
          DVK IESGEV FP
Sbjct: 61 DVKQIESGEVPFP 73

[Close]

BLAST of Moc04g05630 vs. ExPASy TrEMBL
Match: A0A5A7T3V4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00070 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-25
Identity = 59/75 (78.67%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MASM+AHG    W+A QNKAFE+ALAVYD+DTP+RWLNVA AIGGKTEEEV RHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKNIESGEVSFPSR 76
          DVK+IESGE+ FP R
Sbjct: 61 DVKHIESGEIPFPYR 75

[Close]

BLAST of Moc04g05630 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 100.1 bits (248), Expect = 8.0e-22
Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 2  ASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVED 61
          +SMS+  S G+W+A QNKAFE+ALA YD+DTP RW NVA  +GGKT EEV RHY+LLV+D
Sbjct: 4  SSMSSQ-SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKNIESGEVSFPS 75
          + +IE+G V FP+
Sbjct: 64 INSIENGHVPFPN 75

[Close]

BLAST of Moc04g05630 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-21
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 3  SMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVEDV 62
          SMS++GS G+W+  QNKAFERALAVYD+DTP RW NVA A+GGKT EE  R Y LLV D+
Sbjct: 5  SMSSYGS-GSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KNIESGEVSFP 74
          ++IE+G V FP
Sbjct: 65 ESIENGHVPFP 74

[Close]

BLAST of Moc04g05630 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-19
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MAS ++  S   W+  QNK FERALAVYD+DTP RW NVA A+GGKT EEV RHY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKNIESGEVSFPS 75
          D+ NIE+G V  P+
Sbjct: 61 DLINIETGRVPLPN 73

[Close]

BLAST of Moc04g05630 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-19
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MAS ++  S   W+  QNK FERALAVYD+DTP RW NVA A+GGKT EEV RHY +LVE
Sbjct: 1  MAS-NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 60

Query: 61 DVKNIESGEVSFPS 75
          D+ NIE+G V  P+
Sbjct: 61 DLINIETGRVPLPN 73

[Close]

BLAST of Moc04g05630 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-18
Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVNRHYQLLVE 60
          MAS S+  S  +W++ QNK FERALAVYD+DTP RW NVA A+G K+ EEV RHY +LVE
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVE 60

Query: 61 DVKNIESGEVSFP 74
          D+ NIE   V  P
Sbjct: 61 DLMNIEQDLVPLP 72

The following BLAST results are available for this feature:

BLAST of Moc04g05630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135933.1	7.7e-35	100.00	transcription factor RADIALIS-like [Momordica charantia]	[more]
XP_022136072.1	1.0e-31	94.74	protein RADIALIS-like 1 [Momordica charantia]	[more]
XP_022136067.1	1.0e-26	88.00	protein RADIALIS-like 1 [Momordica charantia]	[more]
XP_022952074.1	6.6e-26	82.19	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-li...	[more]
KAA0036165.1	4.3e-25	78.67	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-...	[more]

BLAST of Moc04g05630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q58FS3	6.6e-21	65.71	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
F4JVB8	1.1e-20	63.01	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	1.9e-20	66.20	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q1A173	3.1e-18	62.16	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q6NNN0	2.6e-17	58.11	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]

BLAST of Moc04g05630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C686	3.7e-35	100.00	transcription factor RADIALIS-like OS=Momordica charantia OX=3673 GN=LOC11100776...	[more]
A0A6J1C4J2	5.1e-32	94.74	protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007855 PE=4 SV=1	[more]
A0A6J1C4I7	4.9e-27	88.00	protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007851 PE=4 SV=1	[more]
A0A6J1GKK4	3.2e-26	82.19	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1	[more]
A0A5A7T3V4	2.1e-25	78.67	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Moc04g05630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	8.0e-22	63.01	RAD-like 1	[more]
AT2G21650.1	1.4e-21	66.20	Homeodomain-like superfamily protein	[more]
AT1G75250.1	2.2e-19	62.16	RAD-like 6	[more]
AT1G75250.2	2.2e-19	62.16	RAD-like 6	[more]
AT1G19510.1	1.8e-18	60.27	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..61 e-value: 5.5E-4 score: 29.2
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..59 e-value: 1.03083E-4 score: 34.0882
None	No IPR available	GENE3D	1.10.10.60		coord: 4..72 e-value: 2.4E-21 score: 77.3
None	No IPR available	PANTHER	PTHR43952:SF53	TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED	coord: 1..74
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..74
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g05630.1	Moc04g05630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity