Moc04g04370 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g04370
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	signal recognition particle 43 kDa protein, chloroplastic
Location	chr4: 2815066 .. 2816151 (-)
RNA-Seq Expression	Moc04g04370
Synteny	Moc04g04370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCCCTTTTCCTCAACCAGTCCATTTCCCGCCTCAAAATCTCCCCCAAATCCAGCCCTCTTCCTCCCCTCTACCCCTCTCGAATTCCCAATCGCAATCTCAAATTCAGCGCCTGCGCAGTCCAAAACGACCAACGATTAGCACAGCAATCCAACGCGGCGATTTCCGCCGGGAAGTTCAACGAGGATGAAACTTACGGCGAAGTCGACGGAATCATCGGTAGCCGAGCGCTACAGGACGGCTCCGGAATGGAGTATTTAATCGCATGGAAAGACGGTCACGCCCCGTCCTGGGTGCCGTCCGATTTCATCGCCAGAGACGTGGTGGCGGAGTACGAGACGCCGTGGTGGACCGCCGCGAAGAAGGCCGACGAATCCGCGCTCAAGTCGCTGATAGACGCGGCGGACGGGCGCGATTTGGACGCAGTCGACGAGGACGGGAGGACGGCGCTGCTGTTCGTGGCGGGGCTGGGATCGGAGGCGTGCGTGAGGATGTTAGCGGAGGGCGGGGCGAACGTGGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTGAAGCCGGGGGCGGTGGAGCAATTACTGGATCTGGGAGCATATCCGGAAGTAGAGGACGAGAAGGGGCGGACGGCGCTGGAACTGGCGAGGGAGATTCTGAAGGCGACGCCGAGGATTCAGTTCGGGCGGCGGATGGGGCTGGAGAGGGTGGTCGGAGCGCTGGAGAAGGCGGTGTTTGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATCTGGTGAAGTGGAAGGATGGGGAAGACAACGAGTGGGTGAAGGCGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTCGAGGCCGGACTGGAGTACGCGGTGGCGGAGGCGGTGGCCGGAAAGAGGATGGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGACGCCACGTGGGAGCCGTTGGATAATGTGGATCCTGATCTGATTAAGGAGTTTGAAGACGCCCAAGCCCAATCCAGTAATGGTGGGCTTTGA

mRNA sequence

ATGGATGCCCTTTTCCTCAACCAGTCCATTTCCCGCCTCAAAATCTCCCCCAAATCCAGCCCTCTTCCTCCCCTCTACCCCTCTCGAATTCCCAATCGCAATCTCAAATTCAGCGCCTGCGCAGTCCAAAACGACCAACGATTAGCACAGCAATCCAACGCGGCGATTTCCGCCGGGAAGTTCAACGAGGATGAAACTTACGGCGAAGTCGACGGAATCATCGGTAGCCGAGCGCTACAGGACGGCTCCGGAATGGAGTATTTAATCGCATGGAAAGACGGTCACGCCCCGTCCTGGGTGCCGTCCGATTTCATCGCCAGAGACGTGGTGGCGGAGTACGAGACGCCGTGGTGGACCGCCGCGAAGAAGGCCGACGAATCCGCGCTCAAGTCGCTGATAGACGCGGCGGACGGGCGCGATTTGGACGCAGTCGACGAGGACGGGAGGACGGCGCTGCTGTTCGTGGCGGGGCTGGGATCGGAGGCGTGCGTGAGGATGTTAGCGGAGGGCGGGGCGAACGTGGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTGAAGCCGGGGGCGGTGGAGCAATTACTGGATCTGGGAGCATATCCGGAAGTAGAGGACGAGAAGGGGCGGACGGCGCTGGAACTGGCGAGGGAGATTCTGAAGGCGACGCCGAGGATTCAGTTCGGGCGGCGGATGGGGCTGGAGAGGGTGGTCGGAGCGCTGGAGAAGGCGGTGTTTGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATCTGGTGAAGTGGAAGGATGGGGAAGACAACGAGTGGGTGAAGGCGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTCGAGGCCGGACTGGAGTACGCGGTGGCGGAGGCGGTGGCCGGAAAGAGGATGGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGACGCCACGTGGGAGCCGTTGGATAATGTGGATCCTGATCTGATTAAGGAGTTTGAAGACGCCCAAGCCCAATCCAGTAATGGTGGGCTTTGA

Coding sequence (CDS)

ATGGATGCCCTTTTCCTCAACCAGTCCATTTCCCGCCTCAAAATCTCCCCCAAATCCAGCCCTCTTCCTCCCCTCTACCCCTCTCGAATTCCCAATCGCAATCTCAAATTCAGCGCCTGCGCAGTCCAAAACGACCAACGATTAGCACAGCAATCCAACGCGGCGATTTCCGCCGGGAAGTTCAACGAGGATGAAACTTACGGCGAAGTCGACGGAATCATCGGTAGCCGAGCGCTACAGGACGGCTCCGGAATGGAGTATTTAATCGCATGGAAAGACGGTCACGCCCCGTCCTGGGTGCCGTCCGATTTCATCGCCAGAGACGTGGTGGCGGAGTACGAGACGCCGTGGTGGACCGCCGCGAAGAAGGCCGACGAATCCGCGCTCAAGTCGCTGATAGACGCGGCGGACGGGCGCGATTTGGACGCAGTCGACGAGGACGGGAGGACGGCGCTGCTGTTCGTGGCGGGGCTGGGATCGGAGGCGTGCGTGAGGATGTTAGCGGAGGGCGGGGCGAACGTGGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTGAAGCCGGGGGCGGTGGAGCAATTACTGGATCTGGGAGCATATCCGGAAGTAGAGGACGAGAAGGGGCGGACGGCGCTGGAACTGGCGAGGGAGATTCTGAAGGCGACGCCGAGGATTCAGTTCGGGCGGCGGATGGGGCTGGAGAGGGTGGTCGGAGCGCTGGAGAAGGCGGTGTTTGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATCTGGTGAAGTGGAAGGATGGGGAAGACAACGAGTGGGTGAAGGCGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTCGAGGCCGGACTGGAGTACGCGGTGGCGGAGGCGGTGGCCGGAAAGAGGATGGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGACGCCACGTGGGAGCCGTTGGATAATGTGGATCCTGATCTGATTAAGGAGTTTGAAGACGCCCAAGCCCAATCCAGTAATGGTGGGCTTTGA

Protein sequence

MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLKFSACAVQNDQRLAQQSNAAISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFGRRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLVADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSNGGL

Homology

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BLAST of Moc04g04370 vs. NCBI nr
Match: XP_022135674.1 (signal recognition particle 43 kDa protein, chloroplastic [Momordica charantia])

HSP 1 Score: 716.8 bits (1849), Expect = 9.1e-203
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLKFSACAVQNDQRLAQQSNAAISAGK 60
           MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLKFSACAVQNDQRLAQQSNAAISAGK
Sbjct: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLKFSACAVQNDQRLAQQSNAAISAGK 60

Query: 61  FNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWWTA 120
           FNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWWTA
Sbjct: 61  FNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS 180
           AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS
Sbjct: 121 AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS 180

Query: 181 GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFGRRMGL 240
           GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFGRRMGL
Sbjct: 181 GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFGRRMGL 240

Query: 241 ERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLVADFEA 300
           ERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLVADFEA
Sbjct: 241 ERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLVADFEA 300

Query: 301 GLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSNGG 360
           GLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSNGG
Sbjct: 301 GLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSNGG 360

Query: 361 L 362
           L
Sbjct: 361 L 361

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BLAST of Moc04g04370 vs. NCBI nr
Match: XP_038888741.1 (signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 557.0 bits (1434), Expect = 1.2e-154
Identity = 283/361 (78.39%), Postives = 309/361 (85.60%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSS-PLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNA 60
           MDA+F+NQS+SRLK+SPK   P PP   SR P+ NL+     F+  AVQ+DQ L QQ+  
Sbjct: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSSRNPHLNLRRNFKHFTPYAVQSDQPLTQQTQ- 60

Query: 61  AISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYE 120
                K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYE
Sbjct: 61  -----KSEDDESYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYE 120

Query: 121 TPWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANV 180
           TPWWTAAKKADESALKSLIDA DGRD DAVDEDGRTALLFVAGLGS  CVRMLAE G N+
Sbjct: 121 TPWWTAAKKADESALKSLIDAGDGRDFDAVDEDGRTALLFVAGLGSNPCVRMLAEAGVNL 180

Query: 181 DHRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQF 240
           DHRDNSGGFTALH+AAGYVKP  VE L++LGA PE+EDEKGRT L LA+EILKATPR+QF
Sbjct: 181 DHRDNSGGFTALHLAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAKEILKATPRVQF 240

Query: 241 GRRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADL 300
            RR+GLERV+GA+EK V+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVK GLIA DL
Sbjct: 241 MRRIGLERVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDL 300

Query: 301 VADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQA 356
           VADFEAGLEYAVAEAV GKR GDDGKMEYLVKWTDI+DATWEP DNVDPDLI EFE AQA
Sbjct: 301 VADFEAGLEYAVAEAVVGKRFGDDGKMEYLVKWTDIQDATWEPQDNVDPDLIAEFEKAQA 355

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BLAST of Moc04g04370 vs. NCBI nr
Match: XP_004153574.1 (signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 551.2 bits (1419), Expect = 6.6e-153
Identity = 279/363 (76.86%), Postives = 316/363 (87.05%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNAA 60
           M+A+FLNQS+SRLK+ PK +PLP  +PS IP+ NL+     F+A AVQ+DQ + QQ+   
Sbjct: 1   MEAVFLNQSLSRLKLPPK-TPLP--FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQ-- 60

Query: 61  ISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 120
               K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYET
Sbjct: 61  ----KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 120

Query: 121 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 180
           PWWTAAKKADESALKSLID+ D RD DAVDEDGRTALLFV+GLGS  CVR+LA+ G N++
Sbjct: 121 PWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLN 180

Query: 181 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFG 240
           HRDNSGGFTALHMAAGYVKP  VE L++LGA PE++DEKGRTALELA+EILKATPR+QF 
Sbjct: 181 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFM 240

Query: 241 RRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLV 300
           RR+GLE+V+ A+EK V+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVK GLIA DLV
Sbjct: 241 RRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV 300

Query: 301 ADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQ 359
            D+EAGLEYAVAEAV GKR+GDDGKMEYLVKWTDI+DATWEPLDNVDPDLI EFE AQAQ
Sbjct: 301 GDYEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ 354

[Close]

BLAST of Moc04g04370 vs. NCBI nr
Match: XP_008447899.1 (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 549.7 bits (1415), Expect = 1.9e-152
Identity = 277/362 (76.52%), Postives = 315/362 (87.02%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSS-PLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNA 60
           M+A+FLNQS+SRLK+ PK   PLP  +PS IP+ NL+     F+A AVQ+DQ + QQ+  
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTY- 60

Query: 61  AISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYE 120
                K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYE
Sbjct: 61  -----KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYE 120

Query: 121 TPWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANV 180
           TPWWTAAKKAD+SAL+SLID+ D RD DAVDEDGRTALLFV+GLGS  CVR+LAE G N+
Sbjct: 121 TPWWTAAKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNL 180

Query: 181 DHRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQF 240
           +HRDNSGGFTALHMAAGYVKP  VE L++LGA PE+EDEKGRTALELA+EILKATPR+QF
Sbjct: 181 NHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQF 240

Query: 241 GRRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADL 300
            RR+GLE+V+GA+EK V+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVK GLIA DL
Sbjct: 241 MRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDL 300

Query: 301 VADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQA 357
           VAD+EAGLEYAVAEAV GKR+GD+GKMEYLVKWTDI+DATWEPLDNVDPDLI EFE AQA
Sbjct: 301 VADYEAGLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQA 356

[Close]

BLAST of Moc04g04370 vs. NCBI nr
Match: KAG6589032.1 (Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 532.3 bits (1370), Expect = 3.2e-147
Identity = 280/377 (74.27%), Postives = 315/377 (83.55%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNAA 60
           MDA+F+NQS+SRLK+ PK  PLP L PS I + +L+     F+A AV  ++ L QQ+   
Sbjct: 1   MDAVFVNQSLSRLKLPPK-PPLPKL-PSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQP 60

Query: 61  ISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 120
            +  +  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYET
Sbjct: 61  DNFPE--DDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 120

Query: 121 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 180
           PWWTAAKKADESALKSLIDAAD RD +AVDEDGRTALLFVAGLGSE C+R+LAE GA++D
Sbjct: 121 PWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLD 180

Query: 181 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFG 240
           HRD SGGFTALHMAAGYVKPG VE LL+LGA PEV+D+KGRT L LAREI+KATPR+QF 
Sbjct: 181 HRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFA 240

Query: 241 RRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLV 300
           RR+GLERV+GALE+ VFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVKA LIA DLV
Sbjct: 241 RRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLV 300

Query: 301 ADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFE----- 360
           ADFEAGLEYAVAEAV GKR+GDDGKMEYLVKWTDIEDATWEP  NVD DL+ EFE     
Sbjct: 301 ADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQKS 360

[Close]

BLAST of Moc04g04370 vs. ExPASy Swiss-Prot
Match: O22265 (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=2)

HSP 1 Score: 406.0 bits (1042), Expect = 4.5e-112
Identity = 213/362 (58.84%), Postives = 273/362 (75.41%), Query Frame = 0


Query: 3   ALFLNQSISRLKISP---KSSPLPPLYPSRIPNRNLK--FSACAVQNDQRLAQQSNAAIS 62
           AL ++QS+SR+K+SP    SS      P  +P R ++  F        QR  +++ +++ 
Sbjct: 12  ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVE 71

Query: 63  AGKFNED--ETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 122
             + +++   +YGEV+ IIGSR   +G+ MEYLI WKDGH+PSWVPS +IA DVV+EYET
Sbjct: 72  EAEEDDESSSSYGEVNKIIGSRTAGEGA-MEYLIEWKDGHSPSWVPSSYIAADVVSEYET 131

Query: 123 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 182
           PWWTAA+KADE AL  L+   + RD+DAVDE+GRTALLFVAGLGS+ CVR+LAE GA++D
Sbjct: 132 PWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 191

Query: 183 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPR---I 242
           HRD  GG TALHMAAGYV+P  VE L++LGA  EVEDE+G TALELAREILK TP+   +
Sbjct: 192 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 251

Query: 243 QFGRRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAA 302
           QFGRR+GLE+V+  LE  VFEYAEV+ ++EKRGKG+++EYLV+WKDG D EWVK   +A 
Sbjct: 252 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 311

Query: 303 DLVADFEAGLEYAVAEAVAGKRMGDDGK-MEYLVKWTDIEDATWEPLDNVDPDLIKEFED 354
           D+  D+E GLEYAVAE+V GKR+GDDGK +EYLVKWTD+ DATWEP DNVD  L+  ++ 
Sbjct: 312 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 369

[Close]

BLAST of Moc04g04370 vs. ExPASy Swiss-Prot
Match: Q8LSQ2 (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 8.0e-93
Identity = 197/384 (51.30%), Postives = 252/384 (65.62%), Query Frame = 0


Query: 1   MDALFLNQSISRLK-ISPKSSPLPPL-----YPSRIPNRNLKFSACAVQNDQRLAQQSNA 60
           M+A+  + S+SRLK  +P +   P L     +  R+PNR L  +A AV  DQ      N 
Sbjct: 1   MEAVLRHPSLSRLKPPNPNAQRTPALSITVPFRLRLPNRRL--TAAAVFQDQ--TNPRNP 60

Query: 61  AISAGKFNEDETYGEVDGIIGSRAL------QDGS-----GMEYLIAWKDGHAPSWVPSD 120
           A   G  ++DE YGEVD I+ SR +      +DGS       EYL+ WKDGH PSW+P++
Sbjct: 61  ASKGG--DDDEAYGEVDRIVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPAE 120

Query: 121 FIARDVVAEYETPWWTAAKKADESALKSLI-DAADGRDLDAVDEDGRTALLFVAGLGSEA 180
            IA DVVAEYETPWWTAAKKAD + + +L+ D    RD DA D  GRTA+ F AGLGSE 
Sbjct: 121 AIAADVVAEYETPWWTAAKKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSEE 180

Query: 181 CVRMLAEGGANVDHRDNS-GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALEL 240
           CVR LAE GA+V   + + GG T LH+A GY +P AV  LL+LGA PE  D +GRT LEL
Sbjct: 181 CVRALAEAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLEL 240

Query: 241 AREILKATPR---IQFGRRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKD 300
            +++L  TP+     F RR+ LE     LEKAV+E+ EVE +++ RG+G+  EYLV+W+D
Sbjct: 241 VQDVLAKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWRD 300

Query: 301 GEDNEWVKAGLIAADLVADFEAGLEYAVAEAVAGKRMG--DDGKMEYLVKWTDIEDATWE 360
           G D EWV+A  +A DLV DF+AGLEYAVAEAV  KR     +GK EYLVKW DIE+ATWE
Sbjct: 301 GGDREWVRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVKWVDIEEATWE 360

[Close]

BLAST of Moc04g04370 vs. ExPASy Swiss-Prot
Match: Q9VL06 (E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.5e-09
Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 122 KKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNSG 181
           +  D  AL+  I++  G D++ +D+ G+T L + +  G+   V  L E GA+V+    S 
Sbjct: 398 RSKDSEALREAIESG-GIDVNCMDDVGQTLLNWASAFGTLEMVEYLCEKGADVNKGQRS- 457

Query: 182 GFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREIL 227
             ++LH AA + +P   + LL  GAYP++ DE G+T L+ ARE L
Sbjct: 458 --SSLHYAACFGRPAIAKILLKFGAYPDLRDEDGKTPLDKARERL 498

[Close]

BLAST of Moc04g04370 vs. ExPASy Swiss-Prot
Match: Q06527 (Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=Alvin_1094 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.2e-09
Identity = 46/108 (42.59%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 112 EYETPWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGG 171
           E  T    AA K +   L  LI+   G DL+A D+ G TALL  A  G    V  LA  G
Sbjct: 163 EGRTALMQAASKGETGVLPLLIEG--GADLEARDKQGATALLIAADQGQAGAVETLAGLG 222

Query: 172 ANVDHRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTAL 220
           A +D  D  G  TAL +A G+     VE+LL +GA P  +D KG TAL
Sbjct: 223 AQLDAVDALGS-TALILAVGHGHVAMVERLLAMGADPNRQDRKGTTAL 267

[Close]

BLAST of Moc04g04370 vs. ExPASy Swiss-Prot
Match: Q69ZR2 (E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 6.1e-08
Identity = 35/103 (33.98%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 122 KKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNSG 181
           +  D  AL   ID     +++ +D+ G+T L + +  G++  V  L E GA+V+    S 
Sbjct: 371 RSKDTDALIDAIDTGAAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRS- 430

Query: 182 GFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELARE 225
             ++LH AA + +P   + LL  GA P++ DE G+T L+ ARE
Sbjct: 431 --SSLHYAACFGRPQVAKTLLRHGANPDLRDEDGKTPLDKARE 470

[Close]

BLAST of Moc04g04370 vs. ExPASy TrEMBL
Match: A0A6J1C248 (signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007575 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 4.4e-203
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLKFSACAVQNDQRLAQQSNAAISAGK 60
           MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLKFSACAVQNDQRLAQQSNAAISAGK
Sbjct: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLKFSACAVQNDQRLAQQSNAAISAGK 60

Query: 61  FNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWWTA 120
           FNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWWTA
Sbjct: 61  FNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS 180
           AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS
Sbjct: 121 AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS 180

Query: 181 GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFGRRMGL 240
           GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFGRRMGL
Sbjct: 181 GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFGRRMGL 240

Query: 241 ERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLVADFEA 300
           ERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLVADFEA
Sbjct: 241 ERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLVADFEA 300

Query: 301 GLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSNGG 360
           GLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSNGG
Sbjct: 301 GLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSNGG 360

Query: 361 L 362
           L
Sbjct: 361 L 361

[Close]

BLAST of Moc04g04370 vs. ExPASy TrEMBL
Match: A0A0A0K634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 3.2e-153
Identity = 279/363 (76.86%), Postives = 316/363 (87.05%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNAA 60
           M+A+FLNQS+SRLK+ PK +PLP  +PS IP+ NL+     F+A AVQ+DQ + QQ+   
Sbjct: 1   MEAVFLNQSLSRLKLPPK-TPLP--FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQ-- 60

Query: 61  ISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 120
               K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYET
Sbjct: 61  ----KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 120

Query: 121 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 180
           PWWTAAKKADESALKSLID+ D RD DAVDEDGRTALLFV+GLGS  CVR+LA+ G N++
Sbjct: 121 PWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLN 180

Query: 181 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFG 240
           HRDNSGGFTALHMAAGYVKP  VE L++LGA PE++DEKGRTALELA+EILKATPR+QF 
Sbjct: 181 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFM 240

Query: 241 RRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLV 300
           RR+GLE+V+ A+EK V+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVK GLIA DLV
Sbjct: 241 RRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV 300

Query: 301 ADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQ 359
            D+EAGLEYAVAEAV GKR+GDDGKMEYLVKWTDI+DATWEPLDNVDPDLI EFE AQAQ
Sbjct: 301 GDYEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ 354

[Close]

BLAST of Moc04g04370 vs. ExPASy TrEMBL
Match: A0A1S3BHX6 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490246 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 9.3e-153
Identity = 277/362 (76.52%), Postives = 315/362 (87.02%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSS-PLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNA 60
           M+A+FLNQS+SRLK+ PK   PLP  +PS IP+ NL+     F+A AVQ+DQ + QQ+  
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTY- 60

Query: 61  AISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYE 120
                K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYE
Sbjct: 61  -----KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYE 120

Query: 121 TPWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANV 180
           TPWWTAAKKAD+SAL+SLID+ D RD DAVDEDGRTALLFV+GLGS  CVR+LAE G N+
Sbjct: 121 TPWWTAAKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNL 180

Query: 181 DHRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQF 240
           +HRDNSGGFTALHMAAGYVKP  VE L++LGA PE+EDEKGRTALELA+EILKATPR+QF
Sbjct: 181 NHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQF 240

Query: 241 GRRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADL 300
            RR+GLE+V+GA+EK V+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVK GLIA DL
Sbjct: 241 MRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDL 300

Query: 301 VADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQA 357
           VAD+EAGLEYAVAEAV GKR+GD+GKMEYLVKWTDI+DATWEPLDNVDPDLI EFE AQA
Sbjct: 301 VADYEAGLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQA 356

[Close]

BLAST of Moc04g04370 vs. ExPASy TrEMBL
Match: A0A6J1EP65 (signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435281 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.5e-147
Identity = 280/377 (74.27%), Postives = 315/377 (83.55%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNAA 60
           MDA+F+NQS+SRLK+ PK  PLP L PS I + +L+     F+A AV  ++ L QQ+   
Sbjct: 57  MDAVFVNQSLSRLKLPPK-PPLPKL-PSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQP 116

Query: 61  ISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 120
            +  +  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYET
Sbjct: 117 DNFPE--DDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 176

Query: 121 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 180
           PWWTAAKKADESALKSLIDAAD RD +AVDEDGRTALLFVAGLGSE C+R+LAE GA++D
Sbjct: 177 PWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLD 236

Query: 181 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFG 240
           HRD SGGFTALHMAAGYVKPG VE LL+LGA PEV+D+KGRT L LAREI+KATPR+QF 
Sbjct: 237 HRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFA 296

Query: 241 RRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLV 300
           RR+GLERV+GALE+ VFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVKA LIA DLV
Sbjct: 297 RRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLV 356

Query: 301 ADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFE----- 360
           ADFEAGLEYAVAEAV GKR+GDDGKMEYLVKWTDIEDATWEP  NVD DL+ EFE     
Sbjct: 357 ADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQKS 416

[Close]

BLAST of Moc04g04370 vs. ExPASy TrEMBL
Match: A0A6J1JM92 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486468 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 7.6e-147
Identity = 280/377 (74.27%), Postives = 314/377 (83.29%), Query Frame = 0


Query: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNAA 60
           MDA+F+NQS+S LK+ PK  PLP L PS I + +L+     F+A AV  ++ L QQ+   
Sbjct: 50  MDAVFVNQSLSSLKLPPK-PPLPKL-PSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQP 109

Query: 61  ISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 120
            +  +  +DE+YGEVDGIIGSR+L D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYET
Sbjct: 110 DNFPE--DDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 169

Query: 121 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 180
           PWWTAAKKADESALKSLIDAAD RD +AVDEDGRTALLFVAGLGSE CVR+LAE GA++D
Sbjct: 170 PWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLD 229

Query: 181 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFG 240
           HRD SGGFTALHMAAGYVKPG VE LL+LGA PEV+D+KGRT L LAREI+KATPR+QF 
Sbjct: 230 HRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFA 289

Query: 241 RRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLV 300
           RR+GLERV+GALE+ VFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVKA LIA DLV
Sbjct: 290 RRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLV 349

Query: 301 ADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFE----- 360
           ADFEAGLEYAVAEAV GKR+GDDGKMEYLVKWTDIEDATWEP  NVD DLI EFE     
Sbjct: 350 ADFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQKS 409

[Close]

BLAST of Moc04g04370 vs. TAIR 10
Match: AT2G47450.1 (chloroplast signal recognition particle component (CAO) )

HSP 1 Score: 406.0 bits (1042), Expect = 3.2e-113
Identity = 213/362 (58.84%), Postives = 273/362 (75.41%), Query Frame = 0


Query: 3   ALFLNQSISRLKISP---KSSPLPPLYPSRIPNRNLK--FSACAVQNDQRLAQQSNAAIS 62
           AL ++QS+SR+K+SP    SS      P  +P R ++  F        QR  +++ +++ 
Sbjct: 12  ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVE 71

Query: 63  AGKFNED--ETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 122
             + +++   +YGEV+ IIGSR   +G+ MEYLI WKDGH+PSWVPS +IA DVV+EYET
Sbjct: 72  EAEEDDESSSSYGEVNKIIGSRTAGEGA-MEYLIEWKDGHSPSWVPSSYIAADVVSEYET 131

Query: 123 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 182
           PWWTAA+KADE AL  L+   + RD+DAVDE+GRTALLFVAGLGS+ CVR+LAE GA++D
Sbjct: 132 PWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 191

Query: 183 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPR---I 242
           HRD  GG TALHMAAGYV+P  VE L++LGA  EVEDE+G TALELAREILK TP+   +
Sbjct: 192 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 251

Query: 243 QFGRRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAA 302
           QFGRR+GLE+V+  LE  VFEYAEV+ ++EKRGKG+++EYLV+WKDG D EWVK   +A 
Sbjct: 252 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 311

Query: 303 DLVADFEAGLEYAVAEAVAGKRMGDDGK-MEYLVKWTDIEDATWEPLDNVDPDLIKEFED 354
           D+  D+E GLEYAVAE+V GKR+GDDGK +EYLVKWTD+ DATWEP DNVD  L+  ++ 
Sbjct: 312 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 369

[Close]

BLAST of Moc04g04370 vs. TAIR 10
Match: AT2G17390.1 (ankyrin repeat-containing 2B )

HSP 1 Score: 56.6 bits (135), Expect = 4.8e-08
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 121 AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS 180
           A   D   LK+ +  A G + D  D +GRTAL F  G G   C ++L + GAN +  D +
Sbjct: 228 ASLGDVEGLKAAL--ASGGNKDEEDSEGRTALHFACGYGEVRCAQVLLDAGANANAIDKN 287

Query: 181 GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAR 224
              T LH AAGY +   V  LL+ GA    ++   +  +++AR
Sbjct: 288 KN-TPLHYAAGYGRKECVSLLLENGAAVTQQNMDNKNPIDVAR 327

[Close]

BLAST of Moc04g04370 vs. TAIR 10
Match: AT4G35450.3 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 56.6 bits (135), Expect = 4.8e-08
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 121 AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS 180
           A   D   LK+ +  A G + D  D +GRTAL F  G G   C ++L + GA+V+  D +
Sbjct: 226 ASLGDVEGLKAAL--ASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 181 GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAR 224
              T LH AAGY +   V  LL+ GA   +++   +T +++A+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAK 325

[Close]

BLAST of Moc04g04370 vs. TAIR 10
Match: AT4G35450.4 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 56.6 bits (135), Expect = 4.8e-08
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 121 AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS 180
           A   D   LK+ +  A G + D  D +GRTAL F  G G   C ++L + GA+V+  D +
Sbjct: 188 ASLGDVEGLKAAL--ASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 247

Query: 181 GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAR 224
              T LH AAGY +   V  LL+ GA   +++   +T +++A+
Sbjct: 248 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAK 287

[Close]

BLAST of Moc04g04370 vs. TAIR 10
Match: AT4G35450.2 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 56.6 bits (135), Expect = 4.8e-08
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 121 AKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRDNS 180
           A   D   LK+ +  A G + D  D +GRTAL F  G G   C ++L + GA+V+  D +
Sbjct: 226 ASLGDVEGLKAAL--ASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 181 GGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAR 224
              T LH AAGY +   V  LL+ GA   +++   +T +++A+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAK 325

The following BLAST results are available for this feature:

BLAST of Moc04g04370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135674.1	9.1e-203	100.00	signal recognition particle 43 kDa protein, chloroplastic [Momordica charantia]	[more]
XP_038888741.1	1.2e-154	78.39	signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_004153574.1	6.6e-153	76.86	signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus]	[more]
XP_008447899.1	1.9e-152	76.52	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis me...	[more]
KAG6589032.1	3.2e-147	74.27	Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]

BLAST of Moc04g04370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22265	4.5e-112	58.84	Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
Q8LSQ2	8.0e-93	51.30	Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati...	[more]
Q9VL06	2.5e-09	36.19	E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2...	[more]
Q06527	3.2e-09	42.59	Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 10...	[more]
Q69ZR2	6.1e-08	33.98	E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2	[more]

BLAST of Moc04g04370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C248	4.4e-203	100.00	signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia...	[more]
A0A0A0K634	3.2e-153	76.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1	[more]
A0A1S3BHX6	9.3e-153	76.52	signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=365...	[more]
A0A6J1EP65	1.5e-147	74.27	signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita mosc...	[more]
A0A6J1JM92	7.6e-147	74.27	signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX...	[more]

BLAST of Moc04g04370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47450.1	3.2e-113	58.84	chloroplast signal recognition particle component (CAO)	[more]
AT2G17390.1	4.8e-08	34.95	ankyrin repeat-containing 2B	[more]
AT4G35450.3	4.8e-08	34.95	ankyrin repeat-containing protein 2	[more]
AT4G35450.4	4.8e-08	34.95	ankyrin repeat-containing protein 2	[more]
AT4G35450.2	4.8e-08	34.95	ankyrin repeat-containing protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 253..303 e-value: 3.1E-8 score: 43.3 coord: 66..118 e-value: 0.13 score: 21.4 coord: 304..354 e-value: 6.4E-7 score: 39.0
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 255..284 score: 8.557401
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 305..351 score: 10.367401
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 181..212 e-value: 0.39 score: 19.8 coord: 147..176 e-value: 3.4 score: 16.7 coord: 112..143 e-value: 480.0 score: 7.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 181..213 score: 9.61777
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 147..179 score: 10.44578
None	No IPR available	GENE3D	2.40.50.40		coord: 251..300 e-value: 4.2E-19 score: 69.8
None	No IPR available	GENE3D	2.40.50.40		coord: 301..353 e-value: 3.8E-25 score: 89.3 coord: 60..111 e-value: 9.0E-15 score: 56.0
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 1..355
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 147..179 score: 9.091537
None	No IPR available	CDD	cd18628	CD3_cpSRP43_like	coord: 302..350 e-value: 1.85745E-11 score: 56.6208
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 112..250 e-value: 2.6E-34 score: 119.7
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 113..224
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 120..211 e-value: 4.1E-8 score: 33.7
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 307..351 e-value: 9.9E-8 score: 31.8
IPR030300	Signal recognition particle 43kDa protein	PANTHER	PTHR24128:SF43	SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC	coord: 1..355
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 253..301
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 303..351
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 64..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g04370.1	Moc04g04370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070208	protein heterotrimerization
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0080085	signal recognition particle, chloroplast targeting
molecular_function	GO:0097718	disordered domain specific binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0030674	protein-macromolecule adaptor activity
molecular_function	GO:0005515	protein binding