Moc04g03720 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g03720
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Pentatricopeptide repeat-containing protein
Location	chr4: 2342456 .. 2343550 (-)
RNA-Seq Expression	Moc04g03720
Synteny	Moc04g03720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGTTGCAGTTGCAATTGCAATCTCGCCTTCGAATGTCGAAGATTGTGTCTTCATCAATTTGGAAGTGCGAAAGGCAGCTTCCTCTGCTCCACGATTCACTGCGAACGCAGGATTTCTCGCTCTTGCCGACGCAATCTCGCTGTTTCAGCTCCAATTCCATGGACGACGATTGGGCCATCTCAAATTCCGAGCCGAGGAGCAACCCGCCGCACCGGCGTTCTCCTCCGGATTCCCGCGAACCTCGTCGAGTTCCTAAATTCTCCGATGGAGTATCTGCTTCTTACCCTGGGGATGATCGGAACCGACGGATTAATAAACGTTCGGAAGGTTCCTCGTTTCGATTTGATAATGAAGGCGGCATTTCGCGGCAAAGGAGTGAGTTTCTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAGTTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACCGAGCAGAGCTCTGCTCCTCGGTTTTCTGAATCTGTCCAGGAGAAGCAGTCGCAACCGCAGCGTCCTCCTGAAGCCGATGAGATATTCAAGAAAATGAAGGAGACGGGTCTCATTCCTAATGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTCTTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGATTTACACCGCTGTAGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCCATCAGGATTTTCAGAAAAATGCAGAAAAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAATAAATTAGAGGAAGCCATAGGATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATGTAACCACTCTTGTTGGCCTAGTTGACGAGTTATGCAAAGAAAGGGGAACGGAAGAAGCTCGGAGTGTCATAGAAACCTTAAAACAAAAAGGGTTCTTGCTGAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCCCCCTTTTCACCAAATATCTGGGAAGCAATCTTTGGGAAAAAAACGAAAGAATTTTTCTGA

mRNA sequence

ATGGCGGCGTTGCAGTTGCAATTGCAATCTCGCCTTCGAATGTCGAAGATTGTGTCTTCATCAATTTGGAAGTGCGAAAGGCAGCTTCCTCTGCTCCACGATTCACTGCGAACGCAGGATTTCTCGCTCTTGCCGACGCAATCTCGCTGTTTCAGCTCCAATTCCATGGACGACGATTGGGCCATCTCAAATTCCGAGCCGAGGAGCAACCCGCCGCACCGGCGTTCTCCTCCGGATTCCCGCGAACCTCGTCGAGTTCCTAAATTCTCCGATGGAGTATCTGCTTCTTACCCTGGGGATGATCGGAACCGACGGATTAATAAACGTTCGGAAGGTTCCTCGTTTCGATTTGATAATGAAGGCGGCATTTCGCGGCAAAGGAGTGAGTTTCTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAGTTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACCGAGCAGAGCTCTGCTCCTCGGTTTTCTGAATCTGTCCAGGAGAAGCAGTCGCAACCGCAGCGTCCTCCTGAAGCCGATGAGATATTCAAGAAAATGAAGGAGACGGGTCTCATTCCTAATGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTCTTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGATTTACACCGCTGTAGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCCATCAGGATTTTCAGAAAAATGCAGAAAAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAATAAATTAGAGGAAGCCATAGGATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATGTAACCACTCTTGTTGGCCTAGTTGACGAGTTATGCAAAGAAAGGGGAACGGAAGAAGCTCGGAGTGTCATAGAAACCTTAAAACAAAAAGGGTTCTTGCTGAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCCCCCTTTTCACCAAATATCTGGGAAGCAATCTTTGGGAAAAAAACGAAAGAATTTTTCTGA

Coding sequence (CDS)

ATGGCGGCGTTGCAGTTGCAATTGCAATCTCGCCTTCGAATGTCGAAGATTGTGTCTTCATCAATTTGGAAGTGCGAAAGGCAGCTTCCTCTGCTCCACGATTCACTGCGAACGCAGGATTTCTCGCTCTTGCCGACGCAATCTCGCTGTTTCAGCTCCAATTCCATGGACGACGATTGGGCCATCTCAAATTCCGAGCCGAGGAGCAACCCGCCGCACCGGCGTTCTCCTCCGGATTCCCGCGAACCTCGTCGAGTTCCTAAATTCTCCGATGGAGTATCTGCTTCTTACCCTGGGGATGATCGGAACCGACGGATTAATAAACGTTCGGAAGGTTCCTCGTTTCGATTTGATAATGAAGGCGGCATTTCGCGGCAAAGGAGTGAGTTTCTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAGTTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACCGAGCAGAGCTCTGCTCCTCGGTTTTCTGAATCTGTCCAGGAGAAGCAGTCGCAACCGCAGCGTCCTCCTGAAGCCGATGAGATATTCAAGAAAATGAAGGAGACGGGTCTCATTCCTAATGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTCTTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGATTTACACCGCTGTAGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCCATCAGGATTTTCAGAAAAATGCAGAAAAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAATAAATTAGAGGAAGCCATAGGATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATGTAACCACTCTTGTTGGCCTAGTTGACGAGTTATGCAAAGAAAGGGGAACGGAAGAAGCTCGGAGTGTCATAGAAACCTTAAAACAAAAAGGGTTCTTGCTGAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCCCCCTTTTCACCAAATATCTGGGAAGCAATCTTTGGGAAAAAAACGAAAGAATTTTTCTGA

Protein sequence

MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

Homology

[Close]

BLAST of Moc04g03720 vs. NCBI nr
Match: XP_022136091.1 (pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_022136092.1 pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia])

HSP 1 Score: 706.4 bits (1822), Expect = 1.2e-199
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60
           MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW
Sbjct: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60

Query: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120
           AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE
Sbjct: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120

Query: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180
           GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE
Sbjct: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240
           ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC
Sbjct: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300
           KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT
Sbjct: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300

Query: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360
           TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT
Sbjct: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Moc04g03720 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 565.8 bits (1457), Expect = 2.6e-157
Identity = 292/364 (80.22%), Postives = 320/364 (87.91%), Query Frame = 0


Query: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60
           M ALQ+QLQSRLR+SKI+ S+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120
             S SEPRS+PP RRSPPD RE RRVPKF+  VSA YP D+RN+R N+  EGS  RF NE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180
           G +SR+RSE LSQKDFSFLEKFKLNTDN S+S EKTE SS+ +FSES+Q KQSQPQ PPE
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300
           KAE LDEAIRIFRKMQ NGISPNAFS+GVLIQGLYKC KLE+A+ FCIEMLESGHSPN+T
Sbjct: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360
           T VGL+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Moc04g03720 vs. NCBI nr
Match: XP_023554525.1 (pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554526.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.1 bits (1450), Expect = 1.7e-156
Identity = 290/364 (79.67%), Postives = 322/364 (88.46%), Query Frame = 0


Query: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60
           M ALQ+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120
             S SEPRS+PP RRSPPD RE RRVPKF+   SA YP D+RN+R N+ SEGSS RF NE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEGSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180
           G +SR+R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ +FSES+Q +QSQPQ PPE
Sbjct: 121 GPMSRRRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGEQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300
           KAEKLDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+T
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360
           T VGL+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKT
Sbjct: 301 TFVGLIDELCKEKGEDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Moc04g03720 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 561.6 bits (1446), Expect = 4.9e-156
Identity = 289/364 (79.40%), Postives = 319/364 (87.64%), Query Frame = 0


Query: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60
           M ALQ+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120
             S SEPRS+PP RRSPPD RE RRVPKF+  VSA YP D+RN+R N+ SEGSS RF NE
Sbjct: 61  NFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180
           G +SR R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ +FSES+Q KQSQPQ PPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300
           KAEK DEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FC EMLESGHSPN+T
Sbjct: 241 KAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT 300

Query: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360
           T VGL+DELCKE+G +EA +VIETLKQKGFL+NEK LREFLNKRAPFSP+IWE IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Moc04g03720 vs. NCBI nr
Match: XP_022952706.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] >XP_022952707.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata])

HSP 1 Score: 560.1 bits (1442), Expect = 1.4e-155
Identity = 288/364 (79.12%), Postives = 320/364 (87.91%), Query Frame = 0


Query: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60
           M ALQ+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120
             S SEPRS+PP RRSPPD RE RRVPKF+  VSA YP D+RN+R N+ SEGSS RF N+
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180
           G +SR R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ + SES+Q KQSQPQ PPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300
           KAEKLDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+T
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360
           T VGL+DELCKE+G +EA +VIETLKQKGFL+NEK LR+FLNKRAPFSP+IWE IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Moc04g03720 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.0e-76
Identity = 147/229 (64.19%), Postives = 174/229 (75.98%), Query Frame = 0


Query: 135 DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGL 194
           D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GL
Sbjct: 83  DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGGL 142

Query: 195 IPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFR 254
           IPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFR
Sbjct: 143 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 202

Query: 255 KMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTLVGLVDELCKER 314
           KMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV T V LVD LC+ +
Sbjct: 203 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVK 262

Query: 315 GTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKE 363
           G E+A+S I+TL QKGF +N KA++EF++KRAPF    WEAIF KK  E
Sbjct: 263 GVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of Moc04g03720 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 57/152 (37.50%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 181 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 240
           A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 241 GFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSP 300
           GFC A + D+  ++ R M K  ISPN  +F VLI    K  KL EA     EM++ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 301 NVTTLVGLVDELCKERGTEEARSVIETLKQKG 330
           N  T   L+D  CKE   EEA  +++ +  KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

[Close]

BLAST of Moc04g03720 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.4e-22
Identity = 59/179 (32.96%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 180 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 239
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 240 DGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHS 299
            GFC+   + EA ++F +M   G+ P++ +F  LI G  K   +++A      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 300 PNVTTLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAI 356
           PNV T   L+D LCKE   + A  ++  + + G   N       +N     S NI EA+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGNIEEAV 511

[Close]

BLAST of Moc04g03720 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.7e-21
Identity = 56/165 (33.94%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 181 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 240
           A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++IYT ++ 
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 241 GFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSP 300
           GFC A + D+  ++ R M K  I+P+  +F  LI    K  KL EA     EM++ G SP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 301 NVTTLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLN 343
           +  T   L+D  CKE   ++A  +++ +  KG   N +     +N
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

[Close]

BLAST of Moc04g03720 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.2e-21
Identity = 51/152 (33.55%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 181 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 240
           AD+  K+M+E G++PN V    +++  CK G + EA   +  + ++G + +   YT +++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600

Query: 241 GFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSP 300
           G  K +K+D+A  IFR+M+  GI+P+ FS+GVLI G  K   +++A     EM+E G +P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 301 NVTTLVGLVDELCKERGTEEARSVIETLKQKG 330
           NV     L+   C+    E+A+ +++ +  KG
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692

[Close]

BLAST of Moc04g03720 vs. ExPASy TrEMBL
Match: A0A6J1C2J3 (pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=3673 GN=LOC111007869 PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 6.0e-200
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60
           MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW
Sbjct: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60

Query: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120
           AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE
Sbjct: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120

Query: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180
           GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE
Sbjct: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240
           ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC
Sbjct: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300
           KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT
Sbjct: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300

Query: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360
           TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT
Sbjct: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Moc04g03720 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.3e-157
Identity = 292/364 (80.22%), Postives = 320/364 (87.91%), Query Frame = 0


Query: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60
           M ALQ+QLQSRLR+SKI+ S+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120
             S SEPRS+PP RRSPPD RE RRVPKF+  VSA YP D+RN+R N+  EGS  RF NE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180
           G +SR+RSE LSQKDFSFLEKFKLNTDN S+S EKTE SS+ +FSES+Q KQSQPQ PPE
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300
           KAE LDEAIRIFRKMQ NGISPNAFS+GVLIQGLYKC KLE+A+ FCIEMLESGHSPN+T
Sbjct: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360
           T VGL+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Moc04g03720 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 6.9e-156
Identity = 288/364 (79.12%), Postives = 320/364 (87.91%), Query Frame = 0


Query: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60
           M ALQ+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120
             S SEPRS+PP RRSPPD RE RRVPKF+  VSA YP D+RN+R N+ SEGSS RF N+
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180
           G +SR R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ + SES+Q KQSQPQ PPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300
           KAEKLDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+T
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360
           T VGL+DELCKE+G +EA +VIETLKQKGFL+NEK LR+FLNKRAPFSP+IWE IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Moc04g03720 vs. ExPASy TrEMBL
Match: A0A0A0K6C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 1.0e-138
Identity = 268/360 (74.44%), Postives = 300/360 (83.33%), Query Frame = 0


Query: 7   QLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSE 66
           QLQSRL++SKI+SS+I K E   PLLH+ LRT DFSL P QSR F+SNSMDDD A S+SE
Sbjct: 5   QLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDSE 64

Query: 67  PRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGISRQ 126
           P + PP RR PPD RE RRVP+   GV+ASY  D+RN+R N+ SEGSS RF NEG  S Q
Sbjct: 65  PINTPPQRRFPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRFTNEGSTSPQ 124

Query: 127 RSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQ--SSAPRFSESVQEKQSQPQRPPEADEI 186
           RSE LSQKDFSFLEKFKLNTDNQSS KEKTE+  SSAP     ++++QS+PQRPPEADEI
Sbjct: 125 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEI 184

Query: 187 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 246
           F KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 185 FGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 247 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTLVG 306
            DEAIRIFRKMQ NGI PNAFSFGVLIQGLYKC KL++A+ FC EMLESGH PN+TT VG
Sbjct: 245 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 304

Query: 307 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 365
           L+D LC E+G +EA SV+ET KQKGFL++EKALRE LNKRAPFSP+IW+  FG +   FF
Sbjct: 305 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF 360

[Close]

BLAST of Moc04g03720 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.5e-137
Identity = 270/360 (75.00%), Postives = 298/360 (82.78%), Query Frame = 0


Query: 7   QLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSE 66
           Q QSRL++SKI+SSSI K E   PLLH+ LRT DFSL P  SR FSSNSMDDD A S SE
Sbjct: 5   QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 64

Query: 67  PRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGISRQ 126
           PR+ PP RR PPD RE RRVP+   GV+ SY  D+RN+R N+ SEGSS RF NEG  SRQ
Sbjct: 65  PRNTPPQRRFPPDHREARRVPR--GGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTSRQ 124

Query: 127 RSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQ-SSAPRFSESVQEK-QSQPQRPPEADEI 186
           RSE LSQKDFSFLEKFKLNTDNQSS  EKTE+ SS+   SES+QEK QSQ QRPP ADEI
Sbjct: 125 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 184

Query: 187 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 246
           F+KMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 185 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 247 LDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTLVG 306
            DEAIRIFRKMQ  GISPNAFSFGVLIQGLYKC KL++A+ FC EMLESGH PN+TT VG
Sbjct: 245 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 304

Query: 307 LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF 365
           L+D LC E+G +EA +V+ET KQKGFL++EKALREFLNKRAPFSP+IW+  FG K   FF
Sbjct: 305 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]

BLAST of Moc04g03720 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 286.6 bits (732), Expect = 2.8e-77
Identity = 147/229 (64.19%), Postives = 174/229 (75.98%), Query Frame = 0


Query: 135 DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGL 194
           D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GL
Sbjct: 83  DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGGL 142

Query: 195 IPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFR 254
           IPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFR
Sbjct: 143 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 202

Query: 255 KMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTLVGLVDELCKER 314
           KMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV T V LVD LC+ +
Sbjct: 203 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVK 262

Query: 315 GTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKE 363
           G E+A+S I+TL QKGF +N KA++EF++KRAPF    WEAIF KK  E
Sbjct: 263 GVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of Moc04g03720 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 286.6 bits (732), Expect = 2.8e-77
Identity = 147/229 (64.19%), Postives = 174/229 (75.98%), Query Frame = 0


Query: 135 DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGL 194
           D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GL
Sbjct: 83  DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGGL 142

Query: 195 IPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFR 254
           IPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFR
Sbjct: 143 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 202

Query: 255 KMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTLVGLVDELCKER 314
           KMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV T V LVD LC+ +
Sbjct: 203 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVK 262

Query: 315 GTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKE 363
           G E+A+S I+TL QKGF +N KA++EF++KRAPF    WEAIF KK  E
Sbjct: 263 GVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of Moc04g03720 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-28
Identity = 98/313 (31.31%), Postives = 157/313 (50.16%), Query Frame = 0


Query: 63  SNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASY----PGDDRNRR---INKRSEGSSF 122
           S+S   S+P    +    +E +   +FS  + A +    P + R RR    +KR+  S F
Sbjct: 53  SSSSWWSSPDDLTASSKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSKRNSNSLF 112

Query: 123 RFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKE--------KTEQSSAPRFSES 182
            +   G  +RQ S     K  +    F L+ D+     E        K E    P    S
Sbjct: 113 PWFCGGVFARQFSS--ETKRVNTKVNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFS 172

Query: 183 VQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIP 242
            +    +P+ P    EIF KM+  G    AV M D L KDG   EA++LF  I++K  +P
Sbjct: 173 KKPAIEEPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMP 232

Query: 243 EVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKL-EEAIGF 302
           +VV +TA+V+ +  A +  E +++F +M  +G+SPNA+++ VLI+GL    K  ++A  +
Sbjct: 233 DVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKY 292

Query: 303 CIEMLESGHSPNVTTLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLN-KRA 359
            +EM+ +G SPN  T   + +   +E   E AR +++ +K KGF+ +EKA+RE L  KR 
Sbjct: 293 LLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRG 352

[Close]

BLAST of Moc04g03720 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 8.1e-24
Identity = 57/152 (37.50%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 181 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 240
           A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 241 GFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSP 300
           GFC A + D+  ++ R M K  ISPN  +F VLI    K  KL EA     EM++ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 301 NVTTLVGLVDELCKERGTEEARSVIETLKQKG 330
           N  T   L+D  CKE   EEA  +++ +  KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

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BLAST of Moc04g03720 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 5.3e-23
Identity = 59/179 (32.96%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 180 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 239
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 240 DGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHS 299
            GFC+   + EA ++F +M   G+ P++ +F  LI G  K   +++A      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 300 PNVTTLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAI 356
           PNV T   L+D LCKE   + A  ++  + + G   N       +N     S NI EA+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGNIEEAV 511

The following BLAST results are available for this feature:

BLAST of Moc04g03720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136091.1	1.2e-199	100.00	pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_...	[more]
XP_022969144.1	2.6e-157	80.22	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X...	[more]
XP_023554525.1	1.7e-156	79.67	pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita...	[more]
KAG7011839.1	4.9e-156	79.40	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022952706.1	1.4e-155	79.12	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] ...	[more]

BLAST of Moc04g03720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL5	4.0e-76	64.19	Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX...	[more]
Q9LPX2	1.1e-22	37.50	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
Q0WVK7	7.4e-22	32.96	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9ASZ8	3.7e-21	33.94	Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX...	[more]
Q9FIT7	8.2e-21	33.55	Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop...	[more]

BLAST of Moc04g03720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2J3	6.0e-200	100.00	pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=...	[more]
A0A6J1I1Q2	1.3e-157	80.22	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O...	[more]
A0A6J1GKZ0	6.9e-156	79.12	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata...	[more]
A0A0A0K6C0	1.0e-138	74.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1	[more]
A0A1S3CFW0	1.5e-137	75.00	pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Moc04g03720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38150.1	2.8e-77	64.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G38150.2	2.8e-77	64.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G03560.2	1.9e-28	31.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12775.1	8.1e-24	37.50	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G05670.1	5.3e-23	32.96	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 266..299 e-value: 2.7E-4 score: 18.9 coord: 199..227 e-value: 7.8E-5 score: 20.6 coord: 230..264 e-value: 8.5E-11 score: 39.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 227..276 e-value: 6.1E-16 score: 58.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 199..224 e-value: 5.8E-5 score: 23.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 193..227 score: 8.582755
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 228..262 score: 13.296114
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 263..297 score: 10.314641
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 143..287 e-value: 7.1E-30 score: 106.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..70
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 57..362
None	No IPR available	PANTHER	PTHR45613:SF39	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 57..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g03720.1	Moc04g03720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding