Moc04g02560 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g02560
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionglycine-rich cell wall structural protein 1-like
Locationchr4: 1627420 .. 1628415 (+)
RNA-Seq ExpressionMoc04g02560
SyntenyMoc04g02560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGTTCTCCAAAATGGTGTTCTCTCGGTCTCCTCCTCCTCTGCATTGTGCTCCATTTGAGTGCTACCGCTCTTGGAGATAAAAAGGTTGATAAGAGTGGATTTAGGGACGATGACTGTGGATGGGGCAGGCGCTGCGGTGGCAGATTTGGAGGACGTGGACCGCGCTTCGGTAGGGGAGGTGGTTTTGGTGGCGGTCGAGGTGGCGGATTTGGTGGTGGATCGGGTCGTGGGGGTGGGTTTGGAGCTGGTGGTGGAGTAGGCGGTGGGGGTGGCGTTGGTGGAGGTGGTGGCTTCGGAGGCGGTGGAGGAGGTGGATTGGGAGGTGGGTCGGGACATGGAGGGGGATTTGGAGCCGGCGGCGGCGTTGGGGGTGGTGCTGGAGGAGGAGTGGGCGGTGGAGGAGGCGGTGGAATTGGCGGTGGGTCAGGTCATGGTGGAGGTTTTGGGGCTGGAGGAGGTTTTGGGGCTGGAGGAGGTGTTGGTGGTGGTGTTGGTGGAGGTGCTGGAGGAGGAGGAGGTGGAGGCGGAGGCGGAGGCGGAGGAGGTGGCGGCATTGGTGGCGGGTCAGGTCACGGTGGAGGTTTTGGAGCCGGAGGAGGTTTAGGTGGTGGCGCTGGTGGAGGTGGAGGTGGAGGGGGAGGTGGTGGCGGCGGCGGCGGCGGCGGCCTGGGTGGGGGATCAGGTCATGGAGGTGGATTTGGAGCAGGCGGTGGCGTAGGAGGCGGAGGAATTGGAGGCGGTGGAGGAGCAGGAGGAGGCGGTGGTGGTGGTGTAGGTGGAGGGTCTGGCCATGGCGGCGGATTTGGTGCCGGTGGAGGTATTGGAGGAGGTGCCGGAGGTGGCCTAGGAGGAGGTTCTGGGGGTGGTGCTGGTGGGGGTCACGGCGGAGGATTTGGAATCGGAATAGGGATTGGAGTAGGAATTGGTGGTGGAGCTGGTCACGGCGTTGGTGTTGGCTCTGGTTCCGGTGGAGGAGCTGGTGGCCACTGA

mRNA sequence

ATGGCTTGTTCTCCAAAATGGTGTTCTCTCGGTCTCCTCCTCCTCTGCATTGTGCTCCATTTGAGTGCTACCGCTCTTGGAGATAAAAAGGTTGATAAGAGTGGATTTAGGGACGATGACTGTGGATGGGGCAGGCGCTGCGGTGGCAGATTTGGAGGACGTGGACCGCGCTTCGGTAGGGGAGGTGGTTTTGGTGGCGGTCGAGGTGGCGGATTTGGTGGTGGATCGGGTCGTGGGGGTGGGTTTGGAGCTGGTGGTGGAGTAGGCGGTGGGGGTGGCGTTGGTGGAGGTGGTGGCTTCGGAGGCGGTGGAGGAGGTGGATTGGGAGGTGGGTCGGGACATGGAGGGGGATTTGGAGCCGGCGGCGGCGTTGGGGGTGGTGCTGGAGGAGGAGTGGGCGGTGGAGGAGGCGGTGGAATTGGCGGTGGGTCAGGTCATGGTGGAGGTTTTGGGGCTGGAGGAGGTTTTGGGGCTGGAGGAGGTGTTGGTGGTGGTGTTGGTGGAGGTGCTGGAGGAGGAGGAGGTGGAGGCGGAGGCGGAGGCGGAGGAGGTGGCGGCATTGGTGGCGGGTCAGGTCACGGTGGAGGTTTTGGAGCCGGAGGAGGTTTAGGTGGTGGCGCTGGTGGAGGTGGAGGTGGAGGGGGAGGTGGTGGCGGCGGCGGCGGCGGCGGCCTGGGTGGGGGATCAGGTCATGGAGGTGGATTTGGAGCAGGCGGTGGCGTAGGAGGCGGAGGAATTGGAGGCGGTGGAGGAGCAGGAGGAGGCGGTGGTGGTGGTGTAGGTGGAGGGTCTGGCCATGGCGGCGGATTTGGTGCCGGTGGAGGTATTGGAGGAGGTGCCGGAGGATTTGGAATCGGAATAGGGATTGGAGTAGGAATTGGTGGTGGAGCTGGTCACGGCGTTGGTGTTGGCTCTGGTTCCGGTGGAGGAGCTGGTGGCCACTGA

Coding sequence (CDS)

ATGGCTTGTTCTCCAAAATGGTGTTCTCTCGGTCTCCTCCTCCTCTGCATTGTGCTCCATTTGAGTGCTACCGCTCTTGGAGATAAAAAGGTTGATAAGAGTGGATTTAGGGACGATGACTGTGGATGGGGCAGGCGCTGCGGTGGCAGATTTGGAGGACGTGGACCGCGCTTCGGTAGGGGAGGTGGTTTTGGTGGCGGTCGAGGTGGCGGATTTGGTGGTGGATCGGGTCGTGGGGGTGGGTTTGGAGCTGGTGGTGGAGTAGGCGGTGGGGGTGGCGTTGGTGGAGGTGGTGGCTTCGGAGGCGGTGGAGGAGGTGGATTGGGAGGTGGGTCGGGACATGGAGGGGGATTTGGAGCCGGCGGCGGCGTTGGGGGTGGTGCTGGAGGAGGAGTGGGCGGTGGAGGAGGCGGTGGAATTGGCGGTGGGTCAGGTCATGGTGGAGGTTTTGGGGCTGGAGGAGGTTTTGGGGCTGGAGGAGGTGTTGGTGGTGGTGTTGGTGGAGGTGCTGGAGGAGGAGGAGGTGGAGGCGGAGGCGGAGGCGGAGGAGGTGGCGGCATTGGTGGCGGGTCAGGTCACGGTGGAGGTTTTGGAGCCGGAGGAGGTTTAGGTGGTGGCGCTGGTGGAGGTGGAGGTGGAGGGGGAGGTGGTGGCGGCGGCGGCGGCGGCGGCCTGGGTGGGGGATCAGGTCATGGAGGTGGATTTGGAGCAGGCGGTGGCGTAGGAGGCGGAGGAATTGGAGGCGGTGGAGGAGCAGGAGGAGGCGGTGGTGGTGGTGTAGGTGGAGGGTCTGGCCATGGCGGCGGATTTGGTGCCGGTGGAGGTATTGGAGGAGGTGCCGGAGGATTTGGAATCGGAATAGGGATTGGAGTAGGAATTGGTGGTGGAGCTGGTCACGGCGTTGGTGTTGGCTCTGGTTCCGGTGGAGGAGCTGGTGGCCACTGA

Protein sequence

MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFRDDDCGWGRRCGGRFGGRGPRFGRGGGFGGGRGGGFGGGSGRGGGFGAGGGVGGGGGVGGGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGGAGGFGIGIGIGVGIGGGAGHGVGVGSGSGGGAGGH
Homology
BLAST of Moc04g02560 vs. NCBI nr
Match: KAG7011907.1 (hypothetical protein SDJN02_26814, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-46
Identity = 272/334 (81.44%), Postives = 280/334 (83.83%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFRDDDCGWGRRCGGRFGGRGPRFGR 60
           M  SPKW SLGLL LCIVLHLSA ALGD K+DKS FRDDDC WGRRCGGRFGGRGPRFGR
Sbjct: 1   MGGSPKWVSLGLLALCIVLHLSAFALGDDKLDKSRFRDDDC-WGRRCGGRFGGRGPRFGR 60

Query: 61  GGGFGGGRGGGFGGGSGRGGGFGAGGGVGGGGGV--GGGGGFGGGGGGGLGGGSGHGGGF 120
           GGGFGGGRGGGFGGG G G G G+GGG GGGGGV  GGGGG GGGGGGGLGGGSG GGGF
Sbjct: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGLGGGGGGGLGGGSGQGGGF 120

Query: 121 GAGGGVGGGA--GGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGAGGGGGG 180
           GAGGGVGGGA  GGG+GGGGGGGIGGGSGHGGGFGAGGG G         GG  GGGGGG
Sbjct: 121 GAGGGVGGGAGGGGGLGGGGGGGIGGGSGHGGGFGAGGGLG---------GGAGGGGGGG 180

Query: 181 GGGGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFG 240
           GGGGGGGGGGIGGGSGHGGGFGAGGG+GGG GGG GGGGGGGGGGGGG+GGGSGHGGGFG
Sbjct: 181 GGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGIGGGSGHGGGFG 240

Query: 241 AGGGVGGGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGG----------------- 300
           AGGGVGGGG+GGGGG GGGGGGG+GGGSGHG GFGAGGGIGGG                 
Sbjct: 241 AGGGVGGGGLGGGGGGGGGGGGGLGGGSGHGSGFGAGGGIGGGGGAGGGGGIGGGSGIGH 300

Query: 301 AGGFGIGIGIGVGIGGGAGHGVGVGSGSGGGAGG 314
            GGFGIGIGIGVGIGGG+GHGVGVGSGSGGG GG
Sbjct: 301 GGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 324

BLAST of Moc04g02560 vs. NCBI nr
Match: XP_023511646.1 (glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-45
Identity = 275/348 (79.02%), Postives = 283/348 (81.32%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFRDDDCGWGRRCGGRFGGRGPRFGR 60
           M  SPKW SLGLL LCIVLHLSA ALGD K+ KS FRDDDC WGRRCGGRFGGRGPRFGR
Sbjct: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLGKSRFRDDDC-WGRRCGGRFGGRGPRFGR 60

Query: 61  GGGFGGGRGGGFGG------GSGRGGGFGAGGGV--GGGGGVGGGGGFGGGGGGGLGGGS 120
           GGGFGGGRGGGFGG      G G GGGFG GGGV  GGGGG+GGGGG GGGGGGGLGGGS
Sbjct: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGGGGGLGGGS 120

Query: 121 GHGGGFGAGGGVGGGA--GGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGA 180
           G GGGFGAGGGVGGGA  GGG+GGGGGGGIGGGSGHGGGFGAGGG G         GG  
Sbjct: 121 GQGGGFGAGGGVGGGAGGGGGLGGGGGGGIGGGSGHGGGFGAGGGVG---------GGAG 180

Query: 181 GGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGGGGGGGGGGGGGLGGGSG 240
           GGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGG+GGG GGG GGGGGGGGGGGGG+GGGSG
Sbjct: 181 GGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGIGGGSG 240

Query: 241 HGGGFGAGGGVGGGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIG--GGA-------- 300
           HGGGFGAGGGVGGGG+GGGGG GGGGGGG+GGGSGHGGGFGAGGGIG  GGA        
Sbjct: 241 HGGGFGAGGGVGGGGLGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGVGGAGGGGGLGG 300

Query: 301 ---------------GGFGIGIGIGVGIGGGAGHGVGVGSGSGGGAGG 314
                          GGFGIGIGIGVGIGGG+GHGVGVGSGSGGG GG
Sbjct: 301 GSGGGIGGGSGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 338

BLAST of Moc04g02560 vs. NCBI nr
Match: KAG6572290.1 (hypothetical protein SDJN03_29018, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.6 bits (488), Expect = 5.2e-45
Identity = 271/334 (81.14%), Postives = 279/334 (83.53%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFRDDDCGWGRRCGGRFGGRGPRFGR 60
           M  SPKW SLGLL LCIVLHLSA ALGD K+DKS FRDDDC WGRRCGGRFGGRGPRFGR
Sbjct: 1   MGGSPKWVSLGLLALCIVLHLSAFALGDDKLDKSRFRDDDC-WGRRCGGRFGGRGPRFGR 60

Query: 61  GGGFGGGRGGGFGGGSGRGGGFGAGGGVGGGGGV--GGGGGFGGGGGGGLGGGSGHGGGF 120
           GGGFGGGRGGGFGGG G G G G+GGG GGGGGV  GGGGG GGGGGGGLGGGSG GGGF
Sbjct: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGLGGGGGGGLGGGSGQGGGF 120

Query: 121 GAGGGVGGGA--GGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGAGGGGGG 180
           GAGGGVGGGA  GGG+GGGGGGGIGGGSGHGGGFGAGGG G         GG  GGGGGG
Sbjct: 121 GAGGGVGGGAGGGGGLGGGGGGGIGGGSGHGGGFGAGGGLG---------GGAGGGGGGG 180

Query: 181 GGGGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFG 240
           GGGGGGGGGGIGGGSGHGGGFGAGGG+GGG GGG GGGGGGGGGGGGG+GGGSGHGGGFG
Sbjct: 181 GGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGIGGGSGHGGGFG 240

Query: 241 AGGGVGGGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGG----------------- 300
           AGGGVGGGG+GGGG  GGGGGGG+GGGSGHG GFGAGGGIGGG                 
Sbjct: 241 AGGGVGGGGLGGGG--GGGGGGGLGGGSGHGSGFGAGGGIGGGGGAGGGGGIGGGSGVGH 300

Query: 301 AGGFGIGIGIGVGIGGGAGHGVGVGSGSGGGAGG 314
            GGFGIGIGIGVGIGGG+GHGVGVGSGSGGG GG
Sbjct: 301 GGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 322

BLAST of Moc04g02560 vs. NCBI nr
Match: XP_011659702.1 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN43514.1 hypothetical protein Csa_020488 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-36
Identity = 272/348 (78.16%), Postives = 280/348 (80.46%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFR-DDDCGWGRRCGGRFGGRGP--- 60
           M  S KW SLGLL LCIVLHLSA  LGD K++K+GFR DDDC WGRRCGGRFGGRG    
Sbjct: 1   MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGRGGF 60

Query: 61  RFGRGGGFGGGRGGGFGG------GSGRGGGFGAGGGVGG--GGGVGGGGGFGGGGGGGL 120
             GRGGGFGGGRGGG GG      G G GGGFG GGGVGG  GGGVGGGGGFGGGGGGGL
Sbjct: 61  GGGRGGGFGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120

Query: 121 GGGSGHGGGFGAGGGVGGGAGGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGG 180
           GGGSGHGGGF  GGGVGGGAGGGVGGGGG G GGG G GGG G GGG GAGGGVGGGVGG
Sbjct: 121 GGGSGHGGGF--GGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGIGAGGGVGGGVGG 180

Query: 181 GAGGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGLGGGAGG--GGGGGGGGGGGGGGGLG 240
           GA GGGGGGGGGGGGGGGIGG  GHGGGFGAGGG+GGG GG  GGGGGGGGGGGGGGG+G
Sbjct: 181 GA-GGGGGGGGGGGGGGGIGG--GHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGGGIG 240

Query: 241 GGSGHGGGFGAGGGVGGG-----GIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGGA- 300
           GGSGHGGGFGAGGGVGGG     G GGGGG GGGGGGG+GGGSGHGGGFG GGG+GGGA 
Sbjct: 241 GGSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGGGLGGGSGHGGGFGGGGGLGGGAG 300

Query: 301 --------------GGFGIGIGIGVGIGGGAGHGVGVGSGSGGGAGGH 315
                         GG GIGIGIGVGIGGG+GHGVGVGSGSGGG GGH
Sbjct: 301 GGGGIGGGAGGGHGGGIGIGIGIGVGIGGGSGHGVGVGSGSGGGGGGH 343

BLAST of Moc04g02560 vs. NCBI nr
Match: XP_022989506.1 (glycine-rich cell wall structural protein 1-like [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 7.8e-33
Identity = 247/326 (75.77%), Postives = 261/326 (80.06%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFRDDDCGWGRRCGGRFGGRGPRFGR 60
           M  SPKW SLG L++CIVLHLSA AL DKK++KS FRDDDC WGRRCGGR+GGRGPR+GR
Sbjct: 1   MGGSPKWVSLGFLVICIVLHLSALALADKKLEKSRFRDDDC-WGRRCGGRYGGRGPRYGR 60

Query: 61  GGGFGGGRGGGFGGGSGRGGGFGAGGGVGGGGGVGGGGGFGGGGGGGLGGGSGHGGGFGA 120
           GGGFGGGRGGGFGGG G G G G GG  G GGGVGGGGGFGG      GGGSGHGGGFGA
Sbjct: 61  GGGFGGGRGGGFGGGRGGGSGGGLGGDGGVGGGVGGGGGFGG------GGGSGHGGGFGA 120

Query: 121 GGGVGGGAGGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGAGGGGGGGGGG 180
           GGGVGGGAGGG GGGGGGG GGG G+GGG G GGGFGAGGG+      G+G GGGGGGGG
Sbjct: 121 GGGVGGGAGGGGGGGGGGG-GGGGGNGGGSGHGGGFGAGGGI------GSGAGGGGGGGG 180

Query: 181 GGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGG 240
           GGGGGG G GSGHGGGFGAGGG+G GAGGGGGGGGGGGGG     GGGSGHGGGFG GGG
Sbjct: 181 GGGGGGSGSGSGHGGGFGAGGGVGSGAGGGGGGGGGGGGGS----GGGSGHGGGFGVGGG 240

Query: 241 V--GGGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGG-----------AGGFGIGI 300
           V  G GG GGGGG GGGGGGG+GGGSGHGGGFGAGGG G G            GGFGIGI
Sbjct: 241 VGSGAGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGAGSGGGLGHGGGGGHGGGFGIGI 300

Query: 301 GIGVGIGGGAGHGVGVGSGSGGGAGG 314
           GIG+G+G G+G GVGVGSGSGGG GG
Sbjct: 301 GIGIGVGSGSGRGVGVGSGSGGGGGG 308

BLAST of Moc04g02560 vs. ExPASy Swiss-Prot
Match: P09789 (Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-21
Identity = 253/382 (66.23%), Postives = 269/382 (70.42%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGF-RDDDCGWGRR-C-GGRFGGRGPR 60
           M  S KW    LL   I   L+A  L D K+++S +  D+ CG+GRR C GGRFGGRGP 
Sbjct: 1   MGSSQKWVIGLLLFSSIFFELTAITLADDKLEESRWGNDNGCGFGRRGCGGGRFGGRGPS 60

Query: 61  FGR----GGGFGGGRGGGFGGGSGRGGGFGAGGGVGGGGGVGGGGGFGG----------- 120
           FGR    GGGFGGG GGG GGG G GGG G GGG GGGGG+GGGGG GG           
Sbjct: 61  FGRGRGAGGGFGGGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGGGGAGGGFGGGAGGGAG 120

Query: 121 -----------------GGGGGLGGGSGHGGGFGAGGGVGG--GAGGGVGGGGGGGIGGG 180
                            GGGGG+GGG+G GGGFGAGGGVGG  GAGGGVGGGGG G GGG
Sbjct: 121 GGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGGVGGGAGAGGGVGGGGGFGGGGG 180

Query: 181 SGHGGGFGAGGGFGAGGGVGGGVGGGAGGG-GGGGGGGGGGGGGIGGGSGHGGGFGAGGG 240
            G GGG G GGGFGAGGGVGGG GGG GGG GGGGGGG GGGGGIGGGSGHGGGFGAGGG
Sbjct: 181 GGVGGGSGHGGGFGAGGGVGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAGGG 240

Query: 241 LGGGAG----GGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGG---GGIGGGGGAGGG 300
           +GGG G    GGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGG   GG+GGGGG GGG
Sbjct: 241 VGGGVGGGAAGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGAAGGVGGGGGFGGG 300

Query: 301 GGGGVGGGSGHGGGFGAGGGIGGGAG-----------------------GFGIGIGIGVG 315
           GGGGVGGGSGHGGGFGAGGG+GGGAG                       G G+GIGIGVG
Sbjct: 301 GGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGGGAGGGGGIGGGHGGGFGVGVGIGIGVG 360

BLAST of Moc04g02560 vs. ExPASy TrEMBL
Match: A0A0A0K3J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043560 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 272/348 (78.16%), Postives = 280/348 (80.46%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFR-DDDCGWGRRCGGRFGGRGP--- 60
           M  S KW SLGLL LCIVLHLSA  LGD K++K+GFR DDDC WGRRCGGRFGGRG    
Sbjct: 1   MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGRGGF 60

Query: 61  RFGRGGGFGGGRGGGFGG------GSGRGGGFGAGGGVGG--GGGVGGGGGFGGGGGGGL 120
             GRGGGFGGGRGGG GG      G G GGGFG GGGVGG  GGGVGGGGGFGGGGGGGL
Sbjct: 61  GGGRGGGFGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120

Query: 121 GGGSGHGGGFGAGGGVGGGAGGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGG 180
           GGGSGHGGGF  GGGVGGGAGGGVGGGGG G GGG G GGG G GGG GAGGGVGGGVGG
Sbjct: 121 GGGSGHGGGF--GGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGIGAGGGVGGGVGG 180

Query: 181 GAGGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGLGGGAGG--GGGGGGGGGGGGGGGLG 240
           GA GGGGGGGGGGGGGGGIGG  GHGGGFGAGGG+GGG GG  GGGGGGGGGGGGGGG+G
Sbjct: 181 GA-GGGGGGGGGGGGGGGIGG--GHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGGGIG 240

Query: 241 GGSGHGGGFGAGGGVGGG-----GIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGGA- 300
           GGSGHGGGFGAGGGVGGG     G GGGGG GGGGGGG+GGGSGHGGGFG GGG+GGGA 
Sbjct: 241 GGSGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGGGLGGGSGHGGGFGGGGGLGGGAG 300

Query: 301 --------------GGFGIGIGIGVGIGGGAGHGVGVGSGSGGGAGGH 315
                         GG GIGIGIGVGIGGG+GHGVGVGSGSGGG GGH
Sbjct: 301 GGGGIGGGAGGGHGGGIGIGIGIGVGIGGGSGHGVGVGSGSGGGGGGH 343

BLAST of Moc04g02560 vs. ExPASy TrEMBL
Match: A0A6J1JK95 (glycine-rich cell wall structural protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486564 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-33
Identity = 247/326 (75.77%), Postives = 261/326 (80.06%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFRDDDCGWGRRCGGRFGGRGPRFGR 60
           M  SPKW SLG L++CIVLHLSA AL DKK++KS FRDDDC WGRRCGGR+GGRGPR+GR
Sbjct: 1   MGGSPKWVSLGFLVICIVLHLSALALADKKLEKSRFRDDDC-WGRRCGGRYGGRGPRYGR 60

Query: 61  GGGFGGGRGGGFGGGSGRGGGFGAGGGVGGGGGVGGGGGFGGGGGGGLGGGSGHGGGFGA 120
           GGGFGGGRGGGFGGG G G G G GG  G GGGVGGGGGFGG      GGGSGHGGGFGA
Sbjct: 61  GGGFGGGRGGGFGGGRGGGSGGGLGGDGGVGGGVGGGGGFGG------GGGSGHGGGFGA 120

Query: 121 GGGVGGGAGGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGAGGGGGGGGGG 180
           GGGVGGGAGGG GGGGGGG GGG G+GGG G GGGFGAGGG+      G+G GGGGGGGG
Sbjct: 121 GGGVGGGAGGGGGGGGGGG-GGGGGNGGGSGHGGGFGAGGGI------GSGAGGGGGGGG 180

Query: 181 GGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGG 240
           GGGGGG G GSGHGGGFGAGGG+G GAGGGGGGGGGGGGG     GGGSGHGGGFG GGG
Sbjct: 181 GGGGGGSGSGSGHGGGFGAGGGVGSGAGGGGGGGGGGGGGS----GGGSGHGGGFGVGGG 240

Query: 241 V--GGGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGG-----------AGGFGIGI 300
           V  G GG GGGGG GGGGGGG+GGGSGHGGGFGAGGG G G            GGFGIGI
Sbjct: 241 VGSGAGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGAGSGGGLGHGGGGGHGGGFGIGI 300

Query: 301 GIGVGIGGGAGHGVGVGSGSGGGAGG 314
           GIG+G+G G+G GVGVGSGSGGG GG
Sbjct: 301 GIGIGVGSGSGRGVGVGSGSGGGGGG 308

BLAST of Moc04g02560 vs. ExPASy TrEMBL
Match: A0A6J5UFK5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS22601 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 266/346 (76.88%), Postives = 277/346 (80.06%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSA-TALGDKKVDKSGFR--DDDCGWGRR-CGGRFGGRGP 60
           M  SPKW SL L++L IVL LSA + LGD KVDK+ FR  DDDC WGRR CGGRF GRGP
Sbjct: 1   MGISPKWLSLSLVVLYIVLQLSAISTLGDDKVDKTRFRGDDDDCPWGRRSCGGRF-GRGP 60

Query: 61  R--FGRGGGFGGGRGGGFGGGSGRGGGFGAGGGVGG--GGGVGGGGGFGGGGGGGLGGGS 120
           R   GRGGG GG  GGGFGGG G GGG GAGGG+GG  GGGVGGGGGFGGGGGGGLGGGS
Sbjct: 61  RGNGGRGGGIGG--GGGFGGGGGHGGGRGAGGGLGGGAGGGVGGGGGFGGGGGGGLGGGS 120

Query: 121 GHGGGFGAGGGVGGGA--GGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGA 180
           GHGGGFGAGGGVGGGA  GGG+GGGGG G GGG G GGG G GGGFGAGGGVGGG GGG 
Sbjct: 121 GHGGGFGAGGGVGGGAGGGGGLGGGGGSGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGL 180

Query: 181 GGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGG--GGGGGGGGGGGGGLGGG 240
            GGGGGGG GGGGGGG+GGGSGHGGGFGAGGG+GGG GGGG  GGGGGGG GGGGGLGGG
Sbjct: 181 -GGGGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGVGGGGGLGGGGGGGSGGGGGLGGG 240

Query: 241 SGHGGGFGAGGGVG---GGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGGA----- 300
           SGHGGGFGAGGGVG   GGG+GGGGGAGGGGGGGVGGGSGHGGGFGAGGG+GGGA     
Sbjct: 241 SGHGGGFGAGGGVGGGAGGGVGGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGIG 300

Query: 301 --------------GGFGIGIGIGVGIGGGAGHGVGVGSGSGGGAG 313
                         GGFGIGIGIGVG+G GAG G G GSGSGGG G
Sbjct: 301 GGGGAGGGGGGGHGGGFGIGIGIGVGVGAGAGSGQGSGSGSGGGGG 342

BLAST of Moc04g02560 vs. ExPASy TrEMBL
Match: A0A6A1UNB2 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G005366 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-29
Identity = 237/330 (71.82%), Postives = 254/330 (76.97%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSATALGDKKVDKSGFRDDDCGWG--RRCGGRFGGRGPRF 60
           M  S KW SL L++LCIVLH+SA  L D KVDK+ + DDDC +G  RRCGGR+GGRG   
Sbjct: 1   MGVSSKWLSLSLIVLCIVLHMSAITLSDDKVDKTRYDDDDCRFGGRRRCGGRWGGRGGGL 60

Query: 61  GRGGGFGGGRGGGFGGGSGRGGGFGAGGGVGGGGGVGGGGGFGGGGGGGLGGGSGHGGGF 120
           G GGG GGGRGGG GGG+                  GGGGG GGGGGGG+GGG+GHGGGF
Sbjct: 61  GGGGGLGGGRGGGIGGGA------------------GGGGGLGGGGGGGVGGGAGHGGGF 120

Query: 121 GAGGGVGGGAGGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGAGGGGGGGG 180
           GAGGGVGGGAGGGVGGGGG G GGG G GGG G GGGFGAGGGVGGG GGG  G GGGGG
Sbjct: 121 GAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGI-GAGGGGG 180

Query: 181 GGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG 240
           GG GGGGG+GGGSG GGGFGAGGG+GGG GGG GGGGGGGGGGGGGLGGGSGHGGGFGAG
Sbjct: 181 GGSGGGGGVGGGSGQGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGLGGGSGHGGGFGAG 240

Query: 241 GGVG-----GGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGGA------------- 300
           GGVG     GGG+GGGGGAGGGGGGGVGGGSGHGGGFGAGGG+G GA             
Sbjct: 241 GGVGGGGGVGGGLGGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGSGAGGGLGGGGGGGHG 300

Query: 301 GGFGIGIGIGVGIGGGAGHGVGVGSGSGGG 311
           GGFGIGIG+G+G+G GAG G G GSGSGGG
Sbjct: 301 GGFGIGIGVGIGVGAGAGQGTGSGSGSGGG 311

BLAST of Moc04g02560 vs. ExPASy TrEMBL
Match: A0A6J5WSF6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22343 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.0e-27
Identity = 255/338 (75.44%), Postives = 265/338 (78.40%), Query Frame = 0

Query: 1   MACSPKWCSLGLLLLCIVLHLSA-TALGDKKVDKSGFR--DDDCGWGRR-CGGRFGGRGP 60
           M  SPKW SL L++L IVL LSA + LGD KVDK+ FR  DDDC WGRR CGGRF GRGP
Sbjct: 1   MGISPKWLSLSLVVLYIVLQLSAISTLGDDKVDKTRFRGDDDDCPWGRRSCGGRF-GRGP 60

Query: 61  RFGRGGGFGGGRGGGFGGGSGRGGGFGAGGGVGGGGGVGGGGGFGGGGGGGLGGGSGHGG 120
           R    GG GGG GGG GGG G GGG G     G GGGVGGGGGFGGGGGGGLGGGSGHGG
Sbjct: 61  R--GNGGRGGGIGGGHGGGRGAGGGLGG----GAGGGVGGGGGFGGGGGGGLGGGSGHGG 120

Query: 121 GFGAGGGVGGGA--GGGVGGGGGGGIGGGSGHGGGFGAGGGFGAGGGVGGGVGGGAGGGG 180
           GFGAGGGVGGGA  GGG+GGGGG G GGG G GGG G GGGFGAGGGVGGG GGG  GGG
Sbjct: 121 GFGAGGGVGGGAGGGGGLGGGGGSGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGL-GGG 180

Query: 181 GGGGGGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGG--GGGGGGGGGGGGGLGGGSGHG 240
           GGGG GGGGGGG+GGGSGHGGGFGAGGG+GGG GGGG  GGGGGGG GGGGGLGGGSGHG
Sbjct: 181 GGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGVGGGGGLGGGGGGGSGGGGGLGGGSGHG 240

Query: 241 GGFGAGGGVG---GGGIGGGGGAGGGGGGGVGGGSGHGGGFGAGGGIGGGA--------- 300
           GGFGAGGGVG   GGG+GGGGGAGGGGGGGVGGGSGHGGGFGAGGG+GGGA         
Sbjct: 241 GGFGAGGGVGGGAGGGVGGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGIGGGGG 300

Query: 301 ----------GGFGIGIGIGVGIGGGAGHGVGVGSGSG 309
                     GGFGIGIGIGVG+G GAG G G GSGSG
Sbjct: 301 AGGGGGGGHGGGFGIGIGIGVGVGAGAGSGQGSGSGSG 330

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7011907.11.6e-4681.44hypothetical protein SDJN02_26814, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023511646.11.8e-4579.02glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo][more]
KAG6572290.15.2e-4581.14hypothetical protein SDJN03_29018, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_011659702.12.6e-3678.16glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN43514.1 hypoth... [more]
XP_022989506.17.8e-3375.77glycine-rich cell wall structural protein 1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
P097894.2e-2166.23Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 ... [more]
Match NameE-valueIdentityDescription
A0A0A0K3J81.2e-3678.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043560 PE=4 SV=1[more]
A0A6J1JK953.8e-3375.77glycine-rich cell wall structural protein 1-like OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J5UFK51.0e-3076.88Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS22601 PE=4 S... [more]
A0A6A1UNB23.3e-2971.82Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G005366 PE=4 SV=1[more]
A0A6J5WSF64.0e-2775.44Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22343 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR40903:SF1GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-LIKEcoord: 1..312
NoneNo IPR availablePANTHERPTHR40903GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-LIKEcoord: 1..312

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g02560.1Moc04g02560.1mRNA