Moc04g02420 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g02420
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Vascular-related unknown protein 1
Location	chr4: 1490845 .. 1494117 (-)
RNA-Seq Expression	Moc04g02420
Synteny	Moc04g02420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAACAAGGATGCGCCGCCGCTGGAAGAGCCCTCCGCCGCCGCCGCCAATTCCGGCGGAGGAGGAGGAGAAGAAGAAGAGAGCGGTTGGACGGATTACTTGGAAGATTATTTCAGCTCCTCAGATATTGAGAGAGAGAAGAGTTTTTTGTGTTCGAGTATTGGGAGCTGTTCAGACGATGGCAATACGACGACCAATGTTTTAAGTCCAACGTTGTGTTCTGTTGGGGAAGTTTTTTTGGATTCTCCTAAGAAGCTAATTTGTTTCAAGAAATTAACAAGAACCCAGAAGATTTTTCAAGATGATTCCTTGGAAGATACCGCTACTTCTCCTGTCCACAGTCCAAAAGTAATTGCCACATAATTATTTAATCTATTTTTTTCTTTCTTTCTATGCATATTCTTTATCAGATTTTGGAATTATATCTTTCTTAGGTTGCTGATTTGAAAGTGAAAACAAAACATGTAAATCTGAAGTTTGATGATCACGCGATGATTCGTGGCTCCATGGTAATTTATCTTTCTCGAGTGACATCTGGAACAATGTTACTGAATAATTCTATACTGATTTTTCTTTTTCGTGATTTTGAGGAATTTAAATTTTAAAACTTTTGAGTTTTTTTTAGGGGAGCGATTACTCAGAGGGAGAAAAAGGTGTTTGTACAGCTGCTGGTGGAGACCTAAAGCAAAGAGGCCTTTGCTTGTTTCCTTTTTCCATGCTTCTTCATTACCAAGGTTGAGCTTATCATTATACTCTTTGTAAAACTCAAATTCTCTTTTTCTCTCTGTTTAAGGTTACTTAAACCCTAGTCTAAGATTTAATTATCTATAAGTTATTTGAGTGTAAATTCCAATTCCCATGCAACATGGTTTAATTTTCTTTGTCATTTTCATGATTATTTTAGTTTATAAAAACTTGGATGTCAAGTTTCGATCTTTTGATCATTGTTAAGGATCTCACATTGAAATGATAAGAGACATGACACAAAGGTTTATAGTATATTTGAGCTACTCTTCTAAAACAACAACTAATTTTGAAATGCAACCTCATGAATATTGATAATATTACATATGAACTTTAAAGCTAATATTCATAATTAATTCCATTCAAGAAGAAAAAACATATTCAATGTGTTGAGATGAAAACATGTATATAAGTTTATGTCACATCGCTCAATCAAATAACATTAATAAATGTCATCTTTGTTTTTTCTTGTTAGAATATCAAATCCAAGCAAAGAGAAAGGAAGATAACAAGAGATTTGCCGCAGAATAATGAAATATGAAATCTCTCTTATTAAATTAAATTGAATCTTACGTTTCGGTATGGTTAATAAAACTTGCATTGCGTAGTACGAGCGGAAGAGTGTTATAAAGCAATGACGTGCAACGACACATGCCATTTTTTTTAAACGATGTTGAAAAGGTATGATGTTGGGTTTCAAAATGGTATGTTTTGGACCAAAAATTGTACTAAGAGAAAGAAGAGGGGAAAAAAATGACATAAAAGTATTGGTGTTTCCACAAGGAAGAGTTTAAAGGCTGTTGAATTTTGATGGATGGATGGGTGGGTGGCATTGCCCATATTTTCTTTCACCTATAAAATTTTAGTGAGAGTTTAGGAAATTTTTCTTTGGCTTTTCTTCTCTCCACTAAAATGGTAATGATTTACAAGGGAAAAGAAGATCCCAAAAAAGTTTTCTTTGGGATTTTGCTTGATGCATCTCCCAAGATTGGGTCCCACATGTTCATGATTGGACCAATTAGAGACTGACAAATTAATTCTTGTATGGACCACCCAAATATATTTATTATCAAATAATTGTTTAATGAAATTTATCCACATATCTTTCAAATTTAAATATTAGATATAAAAGTCTTTTAATATAGTTGAACTGATCCAAGACATATATAATCTATTAGAAGATACAATGCTTATATGATTAAACTCAAAATCTTAAATATAAGAGAGGAATTTAAAAAAATCATATATTAATAGTTATAGGAGAACCTAATAACACATATGACTAGACATTTCTAAAAAATTGGAGAGAATCAATGTCACCTCCTTAGTCATGGATACATATTATACGCTAATTATAAGTTTGATATTTTATCTTTTTGATTCCGGTCTATTATGTCCTTGAATTTTAAAAAATTTCTAATAAGTTTTTTAATTTTCAATTTTATATCTAAAAATAAGTCTCTATGCTAACTTCATTTAGTTCCTTCCGTTTAAAATCAATTCATCATGTATTCATTGAATCATACAGACACAACATGTGATAAACTAATGGAGTTAACGATACATAACCCAATTAGACACAAACTTAAAAGTTCTCGAATCTATAATAAGAAACTTCTTTAAAGTGGAATTTAATACGGGAGGCACCTTGATAAAGCTAAAGGACTAATATTGTAACTGAACCAAAAATTTAGATTACCAAACTAAATTGTACTACTTAAAACTCTTAACAAAAATGCATTATTTTATGCAGTTTTAAAGAGGATATGTATGGTGTCTTGTAAGCTGATGCAATGACAAATGGGTCCAAGAAAAGTCCTCAAAACAGTAATTTAGAATATGTTTGCTTTAAAAGAAAAAAAAATATATATACATGTAAGAAAATACATAGAATATGGATGATGAGTCTGAAAATTAAATATATAAAAGTAGAGGGGGCAGTGATTTAAATAAAAAAAAATGAGAAGGGGCTGCAAAGTGAGAGACCCCTCCATGTGCAGAGGCAGTTGAGAGAACAGATGGGTGAGGACATTGAGCTTAATGAAATTTGTACATTTATCAATTCCATTAATTTTTCTGCCTTGACTCACTGTTTATGTCACCTTTCTACACATTTTTAGATGTATATCTTTAATAATCTTTGTCCAAATATAATTCCTTTTTTTGTTAAAAAAAAAATGTGTGTTCTGTTCCTTTATCTTTAATCCTTTAGTTCTTGCCTGTTGGATCAAACAGTGCGGCGTGTAATAAAATCTATGTCCAAAATGGCTTTTATCTACAGCAACTACACTTTCACTTTTGTTTTTTGGATTAATTTTTTTGTCAATATATTGCTCCACTGTACTTCACTTGTTGAAAGTTTAATACTTTCTTTTTGTGGTTTATGGAGATTTCATGTGTGGGGGTAAAACCAAGTGTCCTCTCCTGTTGAGATCAGCGCAAAACTCTTATGTTGAGATGCGTGTGTCCGAGCTTCGCGCTGAGGATGAAGAGACAATGGCCCAAGAACAGAGTTCAACTTAA

mRNA sequence

ATGGAGAAGAACAAGGATGCGCCGCCGCTGGAAGAGCCCTCCGCCGCCGCCGCCAATTCCGGCGGAGGAGGAGGAGAAGAAGAAGAGAGCGGTTGGACGGATTACTTGGAAGATTATTTCAGCTCCTCAGATATTGAGAGAGAGAAGAGTTTTTTGTGTTCGAGTATTGGGAGCTGTTCAGACGATGGCAATACGACGACCAATGTTTTAAGTCCAACGTTGTGTTCTGTTGGGGAAGTTTTTTTGGATTCTCCTAAGAAGCTAATTTGTTTCAAGAAATTAACAAGAACCCAGAAGATTTTTCAAGATGATTCCTTGGAAGATACCGCTACTTCTCCTGTCCACAGTCCAAAAGTTGCTGATTTGAAAGTGAAAACAAAACATGTAAATCTGAAGTTTGATGATCACGCGATGATTCGTGGCTCCATGGGGAGCGATTACTCAGAGGGAGAAAAAGGTGTTTGTACAGCTGCTGGTGGAGACCTAAAGCAAAGAGGCCTTTGCTTGTTTCCTTTTTCCATGCTTCTTCATTACCAAGATTTCATGTGTGGGGGTAAAACCAAGTGTCCTCTCCTGTTGAGATCAGCGCAAAACTCTTATGTTGAGATGCGTGTGTCCGAGCTTCGCGCTGAGGATGAAGAGACAATGGCCCAAGAACAGAGTTCAACTTAA

Coding sequence (CDS)

ATGGAGAAGAACAAGGATGCGCCGCCGCTGGAAGAGCCCTCCGCCGCCGCCGCCAATTCCGGCGGAGGAGGAGGAGAAGAAGAAGAGAGCGGTTGGACGGATTACTTGGAAGATTATTTCAGCTCCTCAGATATTGAGAGAGAGAAGAGTTTTTTGTGTTCGAGTATTGGGAGCTGTTCAGACGATGGCAATACGACGACCAATGTTTTAAGTCCAACGTTGTGTTCTGTTGGGGAAGTTTTTTTGGATTCTCCTAAGAAGCTAATTTGTTTCAAGAAATTAACAAGAACCCAGAAGATTTTTCAAGATGATTCCTTGGAAGATACCGCTACTTCTCCTGTCCACAGTCCAAAAGTTGCTGATTTGAAAGTGAAAACAAAACATGTAAATCTGAAGTTTGATGATCACGCGATGATTCGTGGCTCCATGGGGAGCGATTACTCAGAGGGAGAAAAAGGTGTTTGTACAGCTGCTGGTGGAGACCTAAAGCAAAGAGGCCTTTGCTTGTTTCCTTTTTCCATGCTTCTTCATTACCAAGATTTCATGTGTGGGGGTAAAACCAAGTGTCCTCTCCTGTTGAGATCAGCGCAAAACTCTTATGTTGAGATGCGTGTGTCCGAGCTTCGCGCTGAGGATGAAGAGACAATGGCCCAAGAACAGAGTTCAACTTAA

Protein sequence

MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQDFMCGGKTKCPLLLRSAQNSYVEMRVSELRAEDEETMAQEQSST

Homology

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BLAST of Moc04g02420 vs. NCBI nr
Match: XP_022136166.1 (uncharacterized protein LOC111007924 [Momordica charantia])

HSP 1 Score: 360.9 bits (925), Expect = 7.8e-96
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS 60
           MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS
Sbjct: 1   MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS 60

Query: 61  DDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVA 120
           DDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVA
Sbjct: 61  DDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVA 120

Query: 121 DLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ 180
           DLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ
Sbjct: 121 DLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ 179

[Close]

BLAST of Moc04g02420 vs. NCBI nr
Match: XP_038888852.1 (vascular-related unknown protein 1-like [Benincasa hispida])

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-35
Identity = 99/194 (51.03%), Postives = 126/194 (64.95%), Query Frame = 0


Query: 1   MEKN------KDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCS 60
           MEKN       D+PP    ++++A +  G  E+EESGWTDYLEDYFSS     E S+LCS
Sbjct: 1   MEKNNATAEGSDSPPENSSTSSSAAAAAGAEEQEESGWTDYLEDYFSS-----ESSYLCS 60

Query: 61  SIGSCSDDGNTTTNVLSPT-----LCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDT 120
           SIGSCS   N   N+ +P         +G++  D P KL  FKK TRTQKIF+DDSL+DT
Sbjct: 61  SIGSCS---NWDHNISNPNYDINKTNHIGKMIFDVPNKL-TFKK-TRTQKIFEDDSLQDT 120

Query: 121 ATSPVHSPKVADLKVKTKHVNLKFDDHAMIRGS---MGSDYSEGEKGVCTAAGGDLKQRG 180
           ATSP+HSPKVADLKVKT H N +FD    + GS   +G  YS+ E GV ++     +++G
Sbjct: 121 ATSPIHSPKVADLKVKTSHENPRFDVITNLTGSERQLGKYYSDKENGVYSS-----EKKG 179

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BLAST of Moc04g02420 vs. NCBI nr
Match: XP_008455422.1 (PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo])

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-33
Identity = 101/193 (52.33%), Postives = 120/193 (62.18%), Query Frame = 0


Query: 4   NKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--D 63
           N +A P    S    +S  G  E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS  D
Sbjct: 8   NNNATPQAPDSPPENSSAAGAEEQEESGWTDYLEDYFNSELVERESSFLCSSIGSCSNWD 67

Query: 64  DGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLTRTQKIFQ-DDSLEDTATSPV 123
           D N   N+  P        +VG V + D PK      K TRTQKIF+ DDSL+DTATSP+
Sbjct: 68  DLN---NISYPNYDINYNINVGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPI 127

Query: 124 HSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGL 181
           HSPKV DLKV+T   N +FDDH  I     GS   MG  YS  EK V +A     +++GL
Sbjct: 128 HSPKVVDLKVRTSQENPRFDDHITIFANSTGSGRQMGKYYSNKEKSVYSA-----EKKGL 187

[Close]

BLAST of Moc04g02420 vs. NCBI nr
Match: XP_011658705.1 (vascular-related unknown protein 1 [Cucumis sativus] >KGN43534.1 hypothetical protein Csa_020147 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-33
Identity = 102/196 (52.04%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 1   MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS 60
           ME N  A    + S    +S     E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS
Sbjct: 1   MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS 60

Query: 61  --DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLTRTQKIFQ-DDSLEDTAT 120
             DD N   N+  P+       ++G V + D PK      K TRTQKIF+ DDSL+DTAT
Sbjct: 61  NWDDRN---NISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTAT 120

Query: 121 SPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQ 180
           SP+HSPKV DLKV+T   N  FDDH  I     GS   MG  YS  EKGV +A     ++
Sbjct: 121 SPIHSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSA-----EK 180

[Close]

BLAST of Moc04g02420 vs. NCBI nr
Match: XP_022930798.1 (vascular-related unknown protein 1-like [Cucurbita moschata] >XP_022930799.1 vascular-related unknown protein 1-like [Cucurbita moschata])

HSP 1 Score: 108.6 bits (270), Expect = 7.0e-20
Identity = 73/128 (57.03%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 2   EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCS 61
           +KN  A  ++ P   ++++  G  E  ESGWT+YLEDY   S+IER+ SFL CSS GSCS
Sbjct: 3   KKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCS 62

Query: 62  DD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHS 121
            D         N LSP  CSVGEV LD+P KL  FKK T TQ+IF DDSLEDTATSPV +
Sbjct: 63  WDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TTTQRIFDDDSLEDTATSPVLT 122

Query: 122 PKVADLKV 125
           PKVADL V
Sbjct: 123 PKVADLNV 126

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BLAST of Moc04g02420 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 59/189 (31.22%), Postives = 88/189 (46.56%), Query Frame = 0


Query: 23  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLC 82
           GG  +EESGWT YL+D+ +         +  ++KS       S S   +  T+  S    
Sbjct: 31  GGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFS---- 90

Query: 83  SVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVADLKVKTKHVNL--- 142
             G+ F ++ P KL   +   RT+KI +DDSLEDTA+SPV+SPKV+      +H+     
Sbjct: 91  --GKSFPVNFPAKLKFGR--GRTKKICEDDSLEDTASSPVNSPKVSHF----EHIQTPPR 150

Query: 143 KFDDHAMIRGSMGSDYSEGEKGVCTAAGG----------------------DLKQRGLCL 179
           K +D+      MG+    G+  +    GG                      DL+ RGLC+
Sbjct: 151 KIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCV 207

[Close]

BLAST of Moc04g02420 vs. ExPASy TrEMBL
Match: A0A6J1C2S1 (uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007924 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.8e-96
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS 60
           MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS
Sbjct: 1   MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS 60

Query: 61  DDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVA 120
           DDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVA
Sbjct: 61  DDGNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVA 120

Query: 121 DLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ 180
           DLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ
Sbjct: 121 DLKVKTKHVNLKFDDHAMIRGSMGSDYSEGEKGVCTAAGGDLKQRGLCLFPFSMLLHYQ 179

[Close]

BLAST of Moc04g02420 vs. ExPASy TrEMBL
Match: A0A0A0K3L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-33
Identity = 102/196 (52.04%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 1   MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS 60
           ME N  A    + S    +S     E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS
Sbjct: 1   MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS 60

Query: 61  --DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLTRTQKIFQ-DDSLEDTAT 120
             DD N   N+  P+       ++G V + D PK      K TRTQKIF+ DDSL+DTAT
Sbjct: 61  NWDDRN---NISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTAT 120

Query: 121 SPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQ 180
           SP+HSPKV DLKV+T   N  FDDH  I     GS   MG  YS  EKGV +A     ++
Sbjct: 121 SPIHSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSA-----EK 180

[Close]

BLAST of Moc04g02420 vs. ExPASy TrEMBL
Match: A0A1S3C0F7 (uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-33
Identity = 101/193 (52.33%), Postives = 120/193 (62.18%), Query Frame = 0


Query: 4   NKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS--D 63
           N +A P    S    +S  G  E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS  D
Sbjct: 8   NNNATPQAPDSPPENSSAAGAEEQEESGWTDYLEDYFNSELVERESSFLCSSIGSCSNWD 67

Query: 64  DGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLTRTQKIFQ-DDSLEDTATSPV 123
           D N   N+  P        +VG V + D PK      K TRTQKIF+ DDSL+DTATSP+
Sbjct: 68  DLN---NISYPNYDINYNINVGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPI 127

Query: 124 HSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQRGL 181
           HSPKV DLKV+T   N +FDDH  I     GS   MG  YS  EK V +A     +++GL
Sbjct: 128 HSPKVVDLKVRTSQENPRFDDHITIFANSTGSGRQMGKYYSNKEKSVYSA-----EKKGL 187

[Close]

BLAST of Moc04g02420 vs. ExPASy TrEMBL
Match: A0A6J1ESI7 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-20
Identity = 73/128 (57.03%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 2   EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCS 61
           +KN  A  ++ P   ++++  G  E  ESGWT+YLEDY   S+IER+ SFL CSS GSCS
Sbjct: 3   KKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCS 62

Query: 62  DD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHS 121
            D         N LSP  CSVGEV LD+P KL  FKK T TQ+IF DDSLEDTATSPV +
Sbjct: 63  WDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TTTQRIFDDDSLEDTATSPVLT 122

Query: 122 PKVADLKV 125
           PKVADL V
Sbjct: 123 PKVADLNV 126

[Close]

BLAST of Moc04g02420 vs. ExPASy TrEMBL
Match: A0A6J1JN61 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-19
Identity = 73/128 (57.03%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 2   EKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFL-CSSIGSCS 61
           +KN    P  E S++AA    G  E EESGWT+YLEDY   S+IER+ SFL CSS GSCS
Sbjct: 3   KKNAGVDPPPEKSSSAAT---GAEEAEESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCS 62

Query: 62  DD----GNTTTNVLSPTLCSVGEVFLDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHS 121
            D         N L+P  CSVGEV LD+P KL    K T TQ IF DDSLEDTATSPV +
Sbjct: 63  WDISEANKEKINALTP-FCSVGEVILDAPNKLSL--KKTTTQTIFDDDSLEDTATSPVLT 122

Query: 122 PKVADLKV 125
           PKVAD  V
Sbjct: 123 PKVADFNV 123

[Close]

BLAST of Moc04g02420 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-10
Identity = 59/189 (31.22%), Postives = 88/189 (46.56%), Query Frame = 0


Query: 23  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLC 82
           GG  +EESGWT YL+D+ +         +  ++KS       S S   +  T+  S    
Sbjct: 31  GGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFS---- 90

Query: 83  SVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVADLKVKTKHVNL--- 142
             G+ F ++ P KL   +   RT+KI +DDSLEDTA+SPV+SPKV+      +H+     
Sbjct: 91  --GKSFPVNFPAKLKFGR--GRTKKICEDDSLEDTASSPVNSPKVSHF----EHIQTPPR 150

Query: 143 KFDDHAMIRGSMGSDYSEGEKGVCTAAGG----------------------DLKQRGLCL 179
           K +D+      MG+    G+  +    GG                      DL+ RGLC+
Sbjct: 151 KIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCV 207

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BLAST of Moc04g02420 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 23  GGGEEEESGWTDYLEDYFS-------SSDIEREKSFLCSSIGSCSDDGNTTTNVLSPTLC 82
           GG  +EESGWT YL+D+ +         +  ++KS       S S   +  T+  S    
Sbjct: 31  GGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFS---- 90

Query: 83  SVGEVF-LDSPKKLICFKKLTRTQKIFQDDSLEDTATSPVHSPKVA 121
             G+ F ++ P KL   +   RT+KI +DDSLEDTA+SPV+SPKV+
Sbjct: 91  --GKSFPVNFPAKLKFGR--GRTKKICEDDSLEDTASSPVNSPKVS 128

The following BLAST results are available for this feature:

BLAST of Moc04g02420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136166.1	7.8e-96	100.00	uncharacterized protein LOC111007924 [Momordica charantia]	[more]
XP_038888852.1	4.5e-35	51.03	vascular-related unknown protein 1-like [Benincasa hispida]	[more]
XP_008455422.1	5.5e-33	52.33	PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]	[more]
XP_011658705.1	5.5e-33	52.04	vascular-related unknown protein 1 [Cucumis sativus] >KGN43534.1 hypothetical pr...	[more]
XP_022930798.1	7.0e-20	57.03	vascular-related unknown protein 1-like [Cucurbita moschata] >XP_022930799.1 vas...	[more]

BLAST of Moc04g02420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSZ3	2.6e-09	31.22	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]

BLAST of Moc04g02420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2S1	3.8e-96	100.00	uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A0A0K3L1	2.7e-33	52.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1	[more]
A0A1S3C0F7	2.7e-33	52.33	uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=...	[more]
A0A6J1ESI7	3.4e-20	57.03	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1	[more]
A0A6J1JN61	1.7e-19	57.03	Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1	[more]

BLAST of Moc04g02420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21710.2	1.8e-10	31.22	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT3G21710.1	1.2e-06	38.68	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 19..179
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 19..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g02420.1	Moc04g02420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development