Moc04g01890 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g01890
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Protein TIC 20
Location	chr4: 1197706 .. 1199516 (-)
RNA-Seq Expression	Moc04g01890
Synteny	Moc04g01890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCGGGTGCTCCGAGCATCGCTCGACTCCGCTCACCGAATCCGCTCCTCCCTGCGGCTGCGCCGCCGTCGACGGCAGTCTCCGTACGGTACGTTGTCTTTTTCGATCGTTTCTTTAATTTTCCGTATTTTTGTCGTTCGTTGCTATTTCGTCGGACCGAAACTGGATCATATTTACAGTTATTGGTTTTTGGCGTTTTAATTATTTATGTTCTCATTTCTTGCCCTGCTTCATTTCTTTCGTTAATTACTGAAAATAGAGTGTATTTGGCTTGGCAAACTGTATCTTTTTCTGTTTATTTGTGTTTTAATTTTGAAGAAATGTTGGGATTATCTGCGGGAAACCTATTGAAGATGATTTGGTGGTCTTTCTATGATAATTATGTTAATCATTAACTGAATCACTTCAAGTAATGGGTATTTGGCATTACTTGACAATACTTCCTGCTGCGACCTCTGTTGTTCTCCATGTAAATTTTAGTTGAGATTGCCGTTCTCAGAAATCTGCTTCTGATTTTGTTCTTCAACACTAATTAATCTTGATTAGGTGCAAGGATGTGGTTCTGAAAAGATGTTCCAAGCCCAGCCAAGTAGCTATGCCCCAATGTCCTCGATTGGGTTATGCTAATATGGGCAGAGAACTTAAGTTATCTATTAGAAATGCTAAACAGGAATCTGGTCAGGAACTGACATTTTTTTCTTCTAGAGGTATGAACAATTTTTACTTTGCATTTTTCTTTTGATATGAAGATTTGAATTGCACAAATATTGTTCAACTCCTGCAGTGTGCGCAAATTTTGTGAAGATGAATTGTAAAAACTCTTTCTGTTTGTTTGCTCTGTCTGTGGGATCATACTCTTGATAGTCGATAAAATATAACGGGATGAGTTTAGCTTGGGAATCAGTGTTCGAACATCCCAAAACCTTGCCTCTACTCTACATATACTGGATAACTGGATGGAACTTTGGTGGGCTTTTGAAGAAGAGTGTAGATCATATTGTTCAGCCAGGATAGACTGCATAGTTCTCACTTCTCATGATATTTTAACCATCTTTTGCTATTTAATCCAGTGTAACCATGTCTGTAGTTGGAGAAGAACCTTCTAATGTTGGTACCGTAATCGTTCTATATATTATTATGATTTCCAGGAACGCCAATATCGCACCTTTCTGCAGCGTCATCCCCACATCTGTCCGGAGAACAAGGCAGTCTATTTCACAAACTTCCACTCTTACCTCCACGAAATTCTGCTTCAAAGAGTCCTCAAGCATTCAGAGATGACTCTTACCGTACAAAACTCTACTCTACGGTAAAGACAAAACCAGAATGGTGGTGGAGGACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCTAATACAGCATATTATCTCCTGCCCTTGCTGGAACACTTGGACATTGATAATTTAATATTTTACGTCCCTGGATCTGTTCAAAATTTACCATGGTGGTTTCCGATGCTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGATTGGCCACATTTCTTAAGATTCCATGTGATGATGGGGATGTTGTTAGAAACAGCGCTCAACATCGTATGGTGCACGAGCAATTTTCTGCCACTTATACATTACAATGGTACATATGCTATGCAATACTGGGCAGCAGTGGGGTTCGTCTACATTTCCATCTTGCTGGTGTGCATAAGGAGTTCTCTCTTGGGCACTTATGCCAGAATACCATTCATTTTCGATAACGCACTTATCCATACTTTTTTCAGTATAGGGCGATACTATCGGCCGTTCTAG

mRNA sequence

ATGGTTCCGGGTGCTCCGAGCATCGCTCGACTCCGCTCACCGAATCCGCTCCTCCCTGCGGCTGCGCCGCCGTCGACGGCAGTCTCCGTACGGTGCAAGGATGTGGTTCTGAAAAGATGTTCCAAGCCCAGCCAAGTAGCTATGCCCCAATGTCCTCGATTGGGTTATGCTAATATGGGCAGAGAACTTAAGTTATCTATTAGAAATGCTAAACAGGAATCTGGTCAGGAACTGACATTTTTTTCTTCTAGAGGAACGCCAATATCGCACCTTTCTGCAGCGTCATCCCCACATCTGTCCGGAGAACAAGGCAGTCTATTTCACAAACTTCCACTCTTACCTCCACGAAATTCTGCTTCAAAGAGTCCTCAAGCATTCAGAGATGACTCTTACCGTACAAAACTCTACTCTACGGTAAAGACAAAACCAGAATGGTGGTGGAGGACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCTAATACAGCATATTATCTCCTGCCCTTGCTGGAACACTTGGACATTGATAATTTAATATTTTACGTCCCTGGATCTGTTCAAAATTTACCATGGTGGTTTCCGATGCTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGATTGGCCACATTTCTTAAGATTCCATGTGATGATGGGGATGTTGTTAGAAACAGCGCTCAACATCGTATGGTGCACGAGCAATTTTCTGCCACTTATACATTACAATGGTACATATGCTATGCAATACTGGGCAGCAGTGGGGTTCGTCTACATTTCCATCTTGCTGGTGTGCATAAGGAGTTCTCTCTTGGGCACTTATGCCAGAATACCATTCATTTTCGATAACGCACTTATCCATACTTTTTTCAGTATAGGGCGATACTATCGGCCGTTCTAG

Coding sequence (CDS)

ATGGTTCCGGGTGCTCCGAGCATCGCTCGACTCCGCTCACCGAATCCGCTCCTCCCTGCGGCTGCGCCGCCGTCGACGGCAGTCTCCGTACGGTGCAAGGATGTGGTTCTGAAAAGATGTTCCAAGCCCAGCCAAGTAGCTATGCCCCAATGTCCTCGATTGGGTTATGCTAATATGGGCAGAGAACTTAAGTTATCTATTAGAAATGCTAAACAGGAATCTGGTCAGGAACTGACATTTTTTTCTTCTAGAGGAACGCCAATATCGCACCTTTCTGCAGCGTCATCCCCACATCTGTCCGGAGAACAAGGCAGTCTATTTCACAAACTTCCACTCTTACCTCCACGAAATTCTGCTTCAAAGAGTCCTCAAGCATTCAGAGATGACTCTTACCGTACAAAACTCTACTCTACGGTAAAGACAAAACCAGAATGGTGGTGGAGGACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCTAATACAGCATATTATCTCCTGCCCTTGCTGGAACACTTGGACATTGATAATTTAATATTTTACGTCCCTGGATCTGTTCAAAATTTACCATGGTGGTTTCCGATGCTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGATTGGCCACATTTCTTAAGATTCCATGTGATGATGGGGATGTTGTTAGAAACAGCGCTCAACATCGTATGGTGCACGAGCAATTTTCTGCCACTTATACATTACAATGGTACATATGCTATGCAATACTGGGCAGCAGTGGGGTTCGTCTACATTTCCATCTTGCTGGTGTGCATAAGGAGTTCTCTCTTGGGCACTTATGCCAGAATACCATTCATTTTCGATAACGCACTTATCCATACTTTTTTCAGTATAGGGCGATACTATCGGCCGTTCTAG

Protein sequence

MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYYRPF

Homology

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BLAST of Moc04g01890 vs. NCBI nr
Match: XP_022147822.1 (protein TIC 20-IV, chloroplastic-like [Momordica charantia])

HSP 1 Score: 617.8 bits (1592), Expect = 4.8e-173
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG 60
           MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG
Sbjct: 1   MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG 60

Query: 61  RELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS 120
           RELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS
Sbjct: 61  RELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS 120

Query: 121 KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL 180
           KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL
Sbjct: 121 KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL 180

Query: 181 IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF 240
           IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF
Sbjct: 181 IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF 240

Query: 241 LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY 300
           LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY
Sbjct: 241 LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY 300

Query: 301 RPF 304
           RPF
Sbjct: 301 RPF 303

[Close]

BLAST of Moc04g01890 vs. NCBI nr
Match: XP_038888476.1 (protein TIC 20-IV, chloroplastic [Benincasa hispida])

HSP 1 Score: 468.4 bits (1204), Expect = 4.7e-128
Identity = 236/301 (78.41%), Postives = 256/301 (85.05%), Query Frame = 0


Query: 6   PSIARL--RSPNPLL-PAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMGRE 65
           PS ARL   SPNPLL P A   +T  SVR KDV LKRC KPSQV +PQC R G +N+  +
Sbjct: 33  PSNARLHCNSPNPLLPPPATATATGASVRYKDVFLKRCFKPSQVVIPQCHRFGSSNLDTK 92

Query: 66  LKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKS 125
           L LSI N KQE  +EL   SS+G  IS LSAA+SPHLSGEQGSLFHKLPLLPPRN A KS
Sbjct: 93  LVLSITNTKQEPYKELKCSSSKGILISQLSAAASPHLSGEQGSLFHKLPLLPPRNCAGKS 152

Query: 126 PQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNLIF 185
           PQAFRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHLD+DNLIF
Sbjct: 153 PQAFRDDSYSVKRHSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIF 212

Query: 186 YVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLP 245
           Y+PG VQ LPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLLET L+IVW +SNF+P
Sbjct: 213 YIPGFVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETLLDIVWYSSNFMP 272

Query: 246 LIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYYRP 304
           LIHYNGTYAMQYWAAVGF+YIS LLVCIRSSLLGTYA+IPFIF+NALIHTFFSIGRYYRP
Sbjct: 273 LIHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRP 332

[Close]

BLAST of Moc04g01890 vs. NCBI nr
Match: XP_023554543.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455.7 bits (1171), Expect = 3.2e-124
Identity = 229/304 (75.33%), Postives = 255/304 (83.88%), Query Frame = 0


Query: 1   MVPGAPSIARLRSPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANM 60
           + P + +  R  SPNPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  AN+
Sbjct: 31  VAPSSGARLRCNSPNPLLAMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDCANL 90

Query: 61  GRELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSA 120
           G  L LSI N KQE  +EL F SSRG  +SHLSAA+SP L GEQGSLFHKLPLLPPR  A
Sbjct: 91  GTNLVLSISNTKQEPCKELKFSSSRGMLMSHLSAAASPTLGGEQGSLFHKLPLLPPRKYA 150

Query: 121 SKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDN 180
            KSPQAFRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DN
Sbjct: 151 RKSPQAFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLNVDN 210

Query: 181 LIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSN 240
           LIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSN
Sbjct: 211 LIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWYTSN 270

Query: 241 FLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRY 300
           F+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS GRY
Sbjct: 271 FMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFSTGRY 330

Query: 301 YRPF 304
           +RPF
Sbjct: 331 FRPF 334

[Close]

BLAST of Moc04g01890 vs. NCBI nr
Match: XP_022952618.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 453.0 bits (1164), Expect = 2.1e-123
Identity = 234/307 (76.22%), Postives = 257/307 (83.71%), Query Frame = 0


Query: 1   MVPGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
           M+  APS  ARLR  S NPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  
Sbjct: 28  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87

Query: 61  ANMGRELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPR 120
           AN+G  L LSI N KQE  +EL F SSRG  ISHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 88  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
             A KSPQ FRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
           +DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W 
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
           TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 304
           GRY+RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Moc04g01890 vs. NCBI nr
Match: XP_022969165.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 453.0 bits (1164), Expect = 2.1e-123
Identity = 227/304 (74.67%), Postives = 254/304 (83.55%), Query Frame = 0


Query: 1   MVPGAPSIARLRSPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANM 60
           + P + +  R  SPNPLL   A   +TA SVR +DVVLK C KPSQV +PQC RLG AN+
Sbjct: 31  VAPSSSARLRCNSPNPLLSMPATMMATASSVRYRDVVLKGCFKPSQVVVPQCRRLGCANL 90

Query: 61  GRELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSA 120
           G  L L I N KQE  +EL F SSRG  ISHLSAA+SP L GEQGSLFHKLPLLPPR  A
Sbjct: 91  GPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPRKYA 150

Query: 121 SKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDN 180
            KSPQAFRDDSY  K +S +  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DN
Sbjct: 151 RKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLNVDN 210

Query: 181 LIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSN 240
           LIFYVPG+VQNLPWWFPMLY NLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSN
Sbjct: 211 LIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWYTSN 270

Query: 241 FLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRY 300
           F+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSL+GTYA+IPFI +NALIHTFFS GRY
Sbjct: 271 FMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFSTGRY 330

Query: 301 YRPF 304
           +RPF
Sbjct: 331 FRPF 334

[Close]

BLAST of Moc04g01890 vs. ExPASy Swiss-Prot
Match: Q9ZQZ9 (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.9e-56
Identity = 115/262 (43.89%), Postives = 165/262 (62.98%), Query Frame = 0


Query: 52  PRLGYANM--GRELKLSIRNAKQESGQEL--------TFFSSRGTPISHLSAASSPHLSG 111
           PR+ + N+    +L+LS  +  +   +E+          F++  T  + L A   P L+ 
Sbjct: 32  PRVFFPNVDSSAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQLFANGLPPLA- 91

Query: 112 EQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQM 171
             G   H+ P+ P R          +DD ++ KL   +  +PEWWWRTLACVPYL++LQ+
Sbjct: 92  -PGLRRHRRPIEPAR--------VAKDDFFKIKL-PKIAERPEWWWRTLACVPYLISLQI 151

Query: 172 SNTAYYLLPLLE-HLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFH 231
           S+  +Y+ P LE H  I ++I+++PG++   P WF M+Y  L Y  VV+NK+ PH+LRFH
Sbjct: 152 SDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFH 211

Query: 232 VMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYAR 291
           +MMGMLLETAL ++WCTSNF PLIH+ G + M YW A+GF YI +LL CIR +L G YA+
Sbjct: 212 MMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQ 271

Query: 292 IPFIFDNALIHTFFSIGRYYRP 303
           IPF+ D A IHT F++G + RP
Sbjct: 272 IPFMTDAASIHTLFNLGGFQRP 282

[Close]

BLAST of Moc04g01890 vs. ExPASy Swiss-Prot
Match: Q8GZ79 (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.8e-48
Identity = 105/214 (49.07%), Postives = 138/214 (64.49%), Query Frame = 0


Query: 83  SRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVK 142
           SRG P+S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D   S+R   +  + 
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFR---FPPMT 120

Query: 143 TKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP 202
            KP+WWWRTLAC+PYLM L      + TAY+L P LE  D + L +   G++  LP WF 
Sbjct: 121 KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFL 180

Query: 203 MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWA 262
           M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++   S ++PL  Y G + M +W 
Sbjct: 181 MAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWT 240

Query: 263 AVGFVYISILLVCIRSSLLGTYARIPFIFDNALI 291
           AV F Y+  +L  IR +L G YA IPF+ D A I
Sbjct: 241 AVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of Moc04g01890 vs. ExPASy Swiss-Prot
Match: Q9ZST8 (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.4e-36
Identity = 83/212 (39.15%), Postives = 122/212 (57.55%), Query Frame = 0


Query: 84  RGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDS-YRTKLYSTVKTK 143
           RG   + +SA SS  LSG Q  L   +P+LP  + +S +P+A +D S +R   +  +  K
Sbjct: 42  RGMTFTDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTPRATKDSSGFR---FPPMTKK 101

Query: 144 PEWWWRTLACVPYLM----ALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPML 203
           P WWWRTL+C+PYL+    A   + TAY+L P + +       F +  ++  LP W  + 
Sbjct: 102 PRWWWRTLSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTYPFLM--AIGTLPRWSLIA 161

Query: 204 YFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAV 263
           YF +AY  +VR K+WPHF RFHV +GML+E AL +    S ++P   Y G   M +W   
Sbjct: 162 YFLIAYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRSFYWGKLGMHFWTTA 221

Query: 264 GFVYISILLVCIRSSLLGTYARIPFIFDNALI 291
            FV++   + CIR +L+G YA +PF+ D A I
Sbjct: 222 FFVFLFTTIECIRCALVGMYADVPFVCDAAYI 248

[Close]

BLAST of Moc04g01890 vs. ExPASy TrEMBL
Match: A0A6J1D3E6 (Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111016667 PE=3 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.3e-173
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG 60
           MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG
Sbjct: 1   MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG 60

Query: 61  RELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS 120
           RELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS
Sbjct: 61  RELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS 120

Query: 121 KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL 180
           KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL
Sbjct: 121 KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL 180

Query: 181 IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF 240
           IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF
Sbjct: 181 IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF 240

Query: 241 LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY 300
           LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY
Sbjct: 241 LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY 300

Query: 301 RPF 304
           RPF
Sbjct: 301 RPF 303

[Close]

BLAST of Moc04g01890 vs. ExPASy TrEMBL
Match: A0A6J1HZ71 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 9.9e-124
Identity = 227/304 (74.67%), Postives = 254/304 (83.55%), Query Frame = 0


Query: 1   MVPGAPSIARLRSPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANM 60
           + P + +  R  SPNPLL   A   +TA SVR +DVVLK C KPSQV +PQC RLG AN+
Sbjct: 31  VAPSSSARLRCNSPNPLLSMPATMMATASSVRYRDVVLKGCFKPSQVVVPQCRRLGCANL 90

Query: 61  GRELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSA 120
           G  L L I N KQE  +EL F SSRG  ISHLSAA+SP L GEQGSLFHKLPLLPPR  A
Sbjct: 91  GPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPRKYA 150

Query: 121 SKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDN 180
            KSPQAFRDDSY  K +S +  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DN
Sbjct: 151 RKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLNVDN 210

Query: 181 LIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSN 240
           LIFYVPG+VQNLPWWFPMLY NLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSN
Sbjct: 211 LIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWYTSN 270

Query: 241 FLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRY 300
           F+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSL+GTYA+IPFI +NALIHTFFS GRY
Sbjct: 271 FMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFSTGRY 330

Query: 301 YRPF 304
           +RPF
Sbjct: 331 FRPF 334

[Close]

BLAST of Moc04g01890 vs. ExPASy TrEMBL
Match: A0A6J1GL44 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 9.9e-124
Identity = 234/307 (76.22%), Postives = 257/307 (83.71%), Query Frame = 0


Query: 1   MVPGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
           M+  APS  ARLR  S NPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  
Sbjct: 28  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87

Query: 61  ANMGRELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPR 120
           AN+G  L LSI N KQE  +EL F SSRG  ISHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 88  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
             A KSPQ FRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
           +DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W 
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
           TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 304
           GRY+RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Moc04g01890 vs. ExPASy TrEMBL
Match: A0A6J1GMA4 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 9.9e-124
Identity = 234/307 (76.22%), Postives = 257/307 (83.71%), Query Frame = 0


Query: 1   MVPGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
           M+  APS  ARLR  S NPLL   A   +TA SVR +DVVLK C KPSQV +PQC RL  
Sbjct: 13  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 72

Query: 61  ANMGRELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPR 120
           AN+G  L LSI N KQE  +EL F SSRG  ISHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 73  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 132

Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
             A KSPQ FRDDSY  K +S V  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 133 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 192

Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
           +DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W 
Sbjct: 193 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 252

Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
           TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS 
Sbjct: 253 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 312

Query: 301 GRYYRPF 304
           GRY+RPF
Sbjct: 313 GRYFRPF 319

[Close]

BLAST of Moc04g01890 vs. ExPASy TrEMBL
Match: A0A6J1HX02 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.4e-122
Identity = 227/304 (74.67%), Postives = 253/304 (83.22%), Query Frame = 0


Query: 1   MVPGAPSIARLRSPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANM 60
           + P + +  R  SPNPLL   A   +TA SVR  DVVLK C KPSQV +PQC RLG AN+
Sbjct: 31  VAPSSSARLRCNSPNPLLSMPATMMATASSVR--DVVLKGCFKPSQVVVPQCRRLGCANL 90

Query: 61  GRELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSA 120
           G  L L I N KQE  +EL F SSRG  ISHLSAA+SP L GEQGSLFHKLPLLPPR  A
Sbjct: 91  GPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPRKYA 150

Query: 121 SKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDN 180
            KSPQAFRDDSY  K +S +  KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL++DN
Sbjct: 151 RKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLNVDN 210

Query: 181 LIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSN 240
           LIFYVPG+VQNLPWWFPMLY NLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W TSN
Sbjct: 211 LIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWYTSN 270

Query: 241 FLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRY 300
           F+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSL+GTYA+IPFI +NALIHTFFS GRY
Sbjct: 271 FMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFSTGRY 330

Query: 301 YRPF 304
           +RPF
Sbjct: 331 FRPF 332

[Close]

BLAST of Moc04g01890 vs. TAIR 10
Match: AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV )

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-57
Identity = 115/262 (43.89%), Postives = 165/262 (62.98%), Query Frame = 0


Query: 52  PRLGYANM--GRELKLSIRNAKQESGQEL--------TFFSSRGTPISHLSAASSPHLSG 111
           PR+ + N+    +L+LS  +  +   +E+          F++  T  + L A   P L+ 
Sbjct: 32  PRVFFPNVDSSAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQLFANGLPPLA- 91

Query: 112 EQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQM 171
             G   H+ P+ P R          +DD ++ KL   +  +PEWWWRTLACVPYL++LQ+
Sbjct: 92  -PGLRRHRRPIEPAR--------VAKDDFFKIKL-PKIAERPEWWWRTLACVPYLISLQI 151

Query: 172 SNTAYYLLPLLE-HLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFH 231
           S+  +Y+ P LE H  I ++I+++PG++   P WF M+Y  L Y  VV+NK+ PH+LRFH
Sbjct: 152 SDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFH 211

Query: 232 VMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYAR 291
           +MMGMLLETAL ++WCTSNF PLIH+ G + M YW A+GF YI +LL CIR +L G YA+
Sbjct: 212 MMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQ 271

Query: 292 IPFIFDNALIHTFFSIGRYYRP 303
           IPF+ D A IHT F++G + RP
Sbjct: 272 IPFMTDAASIHTLFNLGGFQRP 282

[Close]

BLAST of Moc04g01890 vs. TAIR 10
Match: AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20 )

HSP 1 Score: 193.4 bits (490), Expect = 2.7e-49
Identity = 105/214 (49.07%), Postives = 138/214 (64.49%), Query Frame = 0


Query: 83  SRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVK 142
           SRG P+S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D   S+R   +  + 
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFR---FPPMT 120

Query: 143 TKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP 202
            KP+WWWRTLAC+PYLM L      + TAY+L P LE  D + L +   G++  LP WF 
Sbjct: 121 KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFL 180

Query: 203 MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWA 262
           M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++   S ++PL  Y G + M +W 
Sbjct: 181 MAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWT 240

Query: 263 AVGFVYISILLVCIRSSLLGTYARIPFIFDNALI 291
           AV F Y+  +L  IR +L G YA IPF+ D A I
Sbjct: 241 AVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of Moc04g01890 vs. TAIR 10
Match: AT1G04945.3 (HIT-type Zinc finger family protein )

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-44
Identity = 96/198 (48.48%), Postives = 128/198 (64.65%), Query Frame = 0


Query: 83  SRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVK 142
           SRG P+S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D   S+R   +  + 
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFR---FPPMT 120

Query: 143 TKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP 202
            KP+WWWRTLAC+PYLM L      + TAY+L P LE  D + L +   G++  LP WF 
Sbjct: 121 KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFL 180

Query: 203 MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWA 262
           M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++   S ++PL  Y G + M +W 
Sbjct: 181 MAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWT 240

Query: 263 AVGFVYISILLVCIRSSL 275
           AV F Y+  +L  IR +L
Sbjct: 241 AVAFAYLFTVLESIRCAL 253

The following BLAST results are available for this feature:

BLAST of Moc04g01890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147822.1	4.8e-173	100.00	protein TIC 20-IV, chloroplastic-like [Momordica charantia]	[more]
XP_038888476.1	4.7e-128	78.41	protein TIC 20-IV, chloroplastic [Benincasa hispida]	[more]
XP_023554543.1	3.2e-124	75.33	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022952618.1	2.1e-123	76.22	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata]	[more]
XP_022969165.1	2.1e-123	74.67	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Moc04g01890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQZ9	2.9e-56	43.89	Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=...	[more]
Q8GZ79	3.8e-48	49.07	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ...	[more]
Q9ZST8	4.4e-36	39.15	Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1	[more]

BLAST of Moc04g01890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3E6	2.3e-173	100.00	Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111016667 PE=3 SV=1	[more]
A0A6J1HZ71	9.9e-124	74.67	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1	[more]
A0A6J1GL44	9.9e-124	76.22	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]
A0A6J1GMA4	9.9e-124	76.22	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]
A0A6J1HX02	2.4e-122	74.67	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1	[more]

BLAST of Moc04g01890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03320.1	2.1e-57	43.89	translocon at the inner envelope membrane of chloroplasts 20-IV	[more]
AT1G04940.1	2.7e-49	49.07	translocon at the inner envelope membrane of chloroplasts 20	[more]
AT1G04945.3	2.0e-44	48.48	HIT-type Zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005691	Chloroplast protein import component Tic20	PFAM	PF16166	TIC20	coord: 121..288 e-value: 4.3E-63 score: 212.4
IPR005691	Chloroplast protein import component Tic20	PANTHER	PTHR33510	PROTEIN TIC 20-II, CHLOROPLASTIC	coord: 57..303
None	No IPR available	PANTHER	PTHR33510:SF12	PROTEIN TIC 20-IV, CHLOROPLASTIC	coord: 57..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g01890.1	Moc04g01890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion