Moc04g01790 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g01790
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Pentatricopeptide repeat-containing protein
Location	chr4: 1141517 .. 1143490 (+)
RNA-Seq Expression	Moc04g01790
Synteny	Moc04g01790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGAACCCTACTCAGACCTCCATTCTTTTACTCCTCTTCCCGTCCCCTTCATTTAGTCGATCCCAAATCATGTTCTTTGTATCGCAATGGCAAATTATTTCCAGAGAATTCAGAGTCCAATGTCACCTGCGTTTTCGGCGCGAATTCCAGGTGTGTGTTCACGAACACTCTTCTCCCGCCTCCCGAATGGATAGAACCTTTTGTGGATGTCTCTGATGTAGTTTCAAGCTCCCAAGGCGTAGACCCATCTCCATGGGTGGCCCAAATTTTGAATCTTCTAGATGGGTCTCCGAACATGGAAGCCAATTTAGATTCTTTTTGTCGCAATTTTTTGATTAAGTTATCGCCTAATTTCGTTTCGTTTGTTTTACAATCCGTTGAGCTTCGCGAGAAGCCTGAAATTGCTCTGCGATTCTTCTATTGGACGGGTAAGCAGAAGAAATATGTTCATAAGCTCGAATGTTATGTGTCTTTGATTGAACTCCTGACTTTTTCGGCGGATTTGGTCAGAATCCGGTTGCTATTCCGTGAACTTAAGGATAAGGGTTTGTTGATGAGTCTATCAGCGGCGAATTCTTTAATTAAAAGCTTTGGGAATCTTGGACTTGTTGAGGAACTGCTGTGGGTATGGCGACGAATGAAGGAAAATGGGATTGAACCGAGTTTGTTTACTTATAATTTCTTGGTTAATGGATTGGTGAGCTCCATGTTTATTGAATCTGCTGAGAGGGTTTTTGAGGTTATGGATAGTGGAAAAATTGTGCCAGATACTGTGACATATAACATTATGATGAAAGGATACTGCAGGGCTGGGAAAACTCAGAAGGCAATGGAGAAATTTAGAGATATGGAAATGAAGAATGTGAAACCTGATAAGATTACATACATGACATTGATCCAGGCATGCTATTCTGAAGGGGATTTTGATTCGTGTTTGAGTCTTTACCTTGAAATGGAAGAAAAAGGGGTGGAAATTCCTTCTCATTCTTATAGTTTGGTCATCGGTGGGCTCTGTAAGCAAGGAAAATGTATGGAAGCTTATGCTGTTTTTGAGAAGATGAATCGGAAAGGTTCTAGAGCAAATGTTGCTATTTATACGGCTTTGATTGATTCGTACTCGAAAAGTGGGTGCATGGGAGAGGCCATGAGGCTCTTTGAGAGGATGAAAAATGAAGGGCTTGAACCTGATGAAGTAACTTACAGTGTTGTCGTTAATGGATTGTGCAAGAGCGGTAGATTGGAGGATGCAATGGGATATTTTGATTTCTGCCGAAGTAAAGGAGTGGCAATCAATGCCATGTTTTATGCCAGTATAATTGATGGACTTGGAAAGGCTGGGAGAATTGAAGAAGCAGAAAATCTGTTTGAAGAAATGTTCAGAAAGGGTTGTGCTCGAGATTCATATTGTTATAACGCCCTTATAGATGCTCTAGCCAAGGATGGGAAGATTGATCAAGCTTTAGCACTCTTTGGGAGAATGGAAGATGAAGGTTGTGATCAGACGGTTTATACATACACAATTCTTATCGATGGGCTGTTCAAGGAACATAGAAATGAAGAGGCCATAAAACTATGGGATACGATGATTGACAAAGGAATTGCCCCAACTGCAGCTTCTTTCAGAGCTCTTGCCATAGGGCTCTGTCTTTGCGGCAAGGTGGCCAGGGCTTGCAAAATCTTGGACGATCTAGCACCAATGGGTCTCATTCCTGAGACGGCATTTGAGGATATGATCAACACATTGTGCAAAGCTGGACGCATCAAGGAAGCCTGCAAATTGGCAGATGGGATCGTGGATCGGGGTAGGGAAATACCGGGAAGAATCCGTACTGTTCTCATCAATGGCTTGAGAAAGGCAGGTGATGCTGATTTAGCCATTAAACTGATGCATAGTAAGATTGGTATAGGATATGATCGGATGGGTAGTATCAAAAGACGAGTCAAGTTCAGAACACTTATTCAAAATTAA

mRNA sequence

ATGAGAAGAACCCTACTCAGACCTCCATTCTTTTACTCCTCTTCCCGTCCCCTTCATTTAGTCGATCCCAAATCATGTTCTTTGTATCGCAATGGCAAATTATTTCCAGAGAATTCAGAGTCCAATGTCACCTGCGTTTTCGGCGCGAATTCCAGGTGTGTGTTCACGAACACTCTTCTCCCGCCTCCCGAATGGATAGAACCTTTTGTGGATGTCTCTGATGTAGTTTCAAGCTCCCAAGGCGTAGACCCATCTCCATGGGTGGCCCAAATTTTGAATCTTCTAGATGGGTCTCCGAACATGGAAGCCAATTTAGATTCTTTTTGTCGCAATTTTTTGATTAAGTTATCGCCTAATTTCGTTTCGTTTGTTTTACAATCCGTTGAGCTTCGCGAGAAGCCTGAAATTGCTCTGCGATTCTTCTATTGGACGGGTAAGCAGAAGAAATATGTTCATAAGCTCGAATGTTATGTGTCTTTGATTGAACTCCTGACTTTTTCGGCGGATTTGGTCAGAATCCGGTTGCTATTCCGTGAACTTAAGGATAAGGGTTTGTTGATGAGTCTATCAGCGGCGAATTCTTTAATTAAAAGCTTTGGGAATCTTGGACTTGTTGAGGAACTGCTGTGGGTATGGCGACGAATGAAGGAAAATGGGATTGAACCGAGTTTGTTTACTTATAATTTCTTGGTTAATGGATTGGTGAGCTCCATGTTTATTGAATCTGCTGAGAGGGTTTTTGAGGTTATGGATAGTGGAAAAATTGTGCCAGATACTGTGACATATAACATTATGATGAAAGGATACTGCAGGGCTGGGAAAACTCAGAAGGCAATGGAGAAATTTAGAGATATGGAAATGAAGAATGTGAAACCTGATAAGATTACATACATGACATTGATCCAGGCATGCTATTCTGAAGGGGATTTTGATTCGTGTTTGAGTCTTTACCTTGAAATGGAAGAAAAAGGGGTGGAAATTCCTTCTCATTCTTATAGTTTGGTCATCGGTGGGCTCTGTAAGCAAGGAAAATGTATGGAAGCTTATGCTGTTTTTGAGAAGATGAATCGGAAAGGTTCTAGAGCAAATGTTGCTATTTATACGGCTTTGATTGATTCGTACTCGAAAAGTGGGTGCATGGGAGAGGCCATGAGGCTCTTTGAGAGGATGAAAAATGAAGGGCTTGAACCTGATGAAGTAACTTACAGTGTTGTCGTTAATGGATTGTGCAAGAGCGGTAGATTGGAGGATGCAATGGGATATTTTGATTTCTGCCGAAGTAAAGGAGTGGCAATCAATGCCATGTTTTATGCCAGTATAATTGATGGACTTGGAAAGGCTGGGAGAATTGAAGAAGCAGAAAATCTGTTTGAAGAAATGTTCAGAAAGGGTTGTGCTCGAGATTCATATTGTTATAACGCCCTTATAGATGCTCTAGCCAAGGATGGGAAGATTGATCAAGCTTTAGCACTCTTTGGGAGAATGGAAGATGAAGGTTGTGATCAGACGGTTTATACATACACAATTCTTATCGATGGGCTGTTCAAGGAACATAGAAATGAAGAGGCCATAAAACTATGGGATACGATGATTGACAAAGGAATTGCCCCAACTGCAGCTTCTTTCAGAGCTCTTGCCATAGGGCTCTGTCTTTGCGGCAAGGTGGCCAGGGCTTGCAAAATCTTGGACGATCTAGCACCAATGGGTCTCATTCCTGAGACGGCATTTGAGGATATGATCAACACATTGTGCAAAGCTGGACGCATCAAGGAAGCCTGCAAATTGGCAGATGGGATCGTGGATCGGGGTAGGGAAATACCGGGAAGAATCCGTACTGTTCTCATCAATGGCTTGAGAAAGGCAGGTGATGCTGATTTAGCCATTAAACTGATGCATAGTAAGATTGGTATAGGATATGATCGGATGGGTAGTATCAAAAGACGAGTCAAGTTCAGAACACTTATTCAAAATTAA

Coding sequence (CDS)

ATGAGAAGAACCCTACTCAGACCTCCATTCTTTTACTCCTCTTCCCGTCCCCTTCATTTAGTCGATCCCAAATCATGTTCTTTGTATCGCAATGGCAAATTATTTCCAGAGAATTCAGAGTCCAATGTCACCTGCGTTTTCGGCGCGAATTCCAGGTGTGTGTTCACGAACACTCTTCTCCCGCCTCCCGAATGGATAGAACCTTTTGTGGATGTCTCTGATGTAGTTTCAAGCTCCCAAGGCGTAGACCCATCTCCATGGGTGGCCCAAATTTTGAATCTTCTAGATGGGTCTCCGAACATGGAAGCCAATTTAGATTCTTTTTGTCGCAATTTTTTGATTAAGTTATCGCCTAATTTCGTTTCGTTTGTTTTACAATCCGTTGAGCTTCGCGAGAAGCCTGAAATTGCTCTGCGATTCTTCTATTGGACGGGTAAGCAGAAGAAATATGTTCATAAGCTCGAATGTTATGTGTCTTTGATTGAACTCCTGACTTTTTCGGCGGATTTGGTCAGAATCCGGTTGCTATTCCGTGAACTTAAGGATAAGGGTTTGTTGATGAGTCTATCAGCGGCGAATTCTTTAATTAAAAGCTTTGGGAATCTTGGACTTGTTGAGGAACTGCTGTGGGTATGGCGACGAATGAAGGAAAATGGGATTGAACCGAGTTTGTTTACTTATAATTTCTTGGTTAATGGATTGGTGAGCTCCATGTTTATTGAATCTGCTGAGAGGGTTTTTGAGGTTATGGATAGTGGAAAAATTGTGCCAGATACTGTGACATATAACATTATGATGAAAGGATACTGCAGGGCTGGGAAAACTCAGAAGGCAATGGAGAAATTTAGAGATATGGAAATGAAGAATGTGAAACCTGATAAGATTACATACATGACATTGATCCAGGCATGCTATTCTGAAGGGGATTTTGATTCGTGTTTGAGTCTTTACCTTGAAATGGAAGAAAAAGGGGTGGAAATTCCTTCTCATTCTTATAGTTTGGTCATCGGTGGGCTCTGTAAGCAAGGAAAATGTATGGAAGCTTATGCTGTTTTTGAGAAGATGAATCGGAAAGGTTCTAGAGCAAATGTTGCTATTTATACGGCTTTGATTGATTCGTACTCGAAAAGTGGGTGCATGGGAGAGGCCATGAGGCTCTTTGAGAGGATGAAAAATGAAGGGCTTGAACCTGATGAAGTAACTTACAGTGTTGTCGTTAATGGATTGTGCAAGAGCGGTAGATTGGAGGATGCAATGGGATATTTTGATTTCTGCCGAAGTAAAGGAGTGGCAATCAATGCCATGTTTTATGCCAGTATAATTGATGGACTTGGAAAGGCTGGGAGAATTGAAGAAGCAGAAAATCTGTTTGAAGAAATGTTCAGAAAGGGTTGTGCTCGAGATTCATATTGTTATAACGCCCTTATAGATGCTCTAGCCAAGGATGGGAAGATTGATCAAGCTTTAGCACTCTTTGGGAGAATGGAAGATGAAGGTTGTGATCAGACGGTTTATACATACACAATTCTTATCGATGGGCTGTTCAAGGAACATAGAAATGAAGAGGCCATAAAACTATGGGATACGATGATTGACAAAGGAATTGCCCCAACTGCAGCTTCTTTCAGAGCTCTTGCCATAGGGCTCTGTCTTTGCGGCAAGGTGGCCAGGGCTTGCAAAATCTTGGACGATCTAGCACCAATGGGTCTCATTCCTGAGACGGCATTTGAGGATATGATCAACACATTGTGCAAAGCTGGACGCATCAAGGAAGCCTGCAAATTGGCAGATGGGATCGTGGATCGGGGTAGGGAAATACCGGGAAGAATCCGTACTGTTCTCATCAATGGCTTGAGAAAGGCAGGTGATGCTGATTTAGCCATTAAACTGATGCATAGTAAGATTGGTATAGGATATGATCGGATGGGTAGTATCAAAAGACGAGTCAAGTTCAGAACACTTATTCAAAATTAA

Protein sequence

MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLLPPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNFVSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFRELKDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFIESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTLIQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGSRANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMGYFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALAKDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAASFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIVDRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN

Homology

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BLAST of Moc04g01790 vs. NCBI nr
Match: XP_022148014.1 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Momordica charantia])

HSP 1 Score: 1325.8 bits (3430), Expect = 0.0e+00
Identity = 657/657 (100.00%), Postives = 657/657 (100.00%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL
Sbjct: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL
Sbjct: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI
Sbjct: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL
Sbjct: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS
Sbjct: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG
Sbjct: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
           YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA
Sbjct: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA
Sbjct: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 657

[Close]

BLAST of Moc04g01790 vs. NCBI nr
Match: KAG6572351.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1181.8 bits (3056), Expect = 0.0e+00
Identity = 585/657 (89.04%), Postives = 614/657 (93.46%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRRTLLRP F  SSSRPL L+DPKS SLYRNGKL P +S+ NVT  FG N R VFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQ  DPSPWVAQILNLLDGS NMEANLDSFCR FLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           V+FVLQSVELRE PEIA RFFYW GKQKKYVHK+ECYVSLIELLTFSADLV+IRL+F EL
Sbjct: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           K +GLLM+LSAANSLIKSFGN GLVEELLWVWRRMKENGIEPSL+TYNFLVNGLV+SMFI
Sbjct: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAERVFEVMD GKIVPDTVTYN+M+KGYC+AGK  KAMEKFR MEMKNV PDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSEGDFD+CLSLYLEMEE+G+EIPSHSYSLVIGGLCKQGKCMEAYAV EKMN+K  
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSKSG MGEAMRLF+RMKNEGLEPD VTYSVVVNGLCKSGRLE+AM 
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
           YFDFCR+KGV INAMFYAS+IDGLGKAGRI EAENLFEEMF KGCARDSYCYNA+IDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           K GKIDQAL LFGRME+EGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI PT A
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA R+KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLINGLRKAG++DLAIKLMHSKIGIGYDRMGSIKRRVKFRTLI+N
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 657

[Close]

BLAST of Moc04g01790 vs. NCBI nr
Match: XP_022953016.1 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1181.8 bits (3056), Expect = 0.0e+00
Identity = 583/657 (88.74%), Postives = 615/657 (93.61%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRRTLLRP F  SSSRPL L+DPKS SLYRNGK+ P +S+ NVT  FG N R VFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKVSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQ  DPSPWVAQILNLLDGS NMEANLDSFCR FLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           V+FVLQSVELRE PEIA RFFYW GKQKKYVHK+ECYVSLIELLTFSADLV+IRL+F EL
Sbjct: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           K +GLLM+LSAANSLIKSFGN GLVEELLWVWRRMKENGIEPSL+TYNFLVNGLV+SMFI
Sbjct: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAERVFEVMD GKI+PDTVTYN+M+KGYC+AGK  KAMEKFR MEMKNV PDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIMPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSEGDFD+CLSLYLEMEE+G+EIPSHSYSLVIGGLCKQGKCMEAYAVFEKMN+K  
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSK+G MGEAMRLFERMKNEGLEPD VTYSVVVNGLCKSGRLE+AM 
Sbjct: 361 RANVAIYTALIDSYSKNGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
           YFDFCR+KGV INAMFYAS+IDGLGKAGRI EAENLFEEMF KGCARDSYCYNA+IDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           K GKIDQAL LFGRME+EGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI PT A
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA R+KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLINGLRKAG++DLAIKLMHSKIGIGYDRMGSIKRRVKFRTL++N
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLVEN 657

[Close]

BLAST of Moc04g01790 vs. NCBI nr
Match: KAG7011962.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1180.2 bits (3052), Expect = 0.0e+00
Identity = 584/657 (88.89%), Postives = 614/657 (93.46%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRRTLLRP F  SSSRPL L+DPKS SLYRNGKL P +S+ NVT  FG N R VFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQ  DPSPWVAQILNLLDGS NMEANLDSFC+ FLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           V+FVLQSVELRE PEIA RFFYW GKQKKYVHK+ECYVSLIELLTFSADLV+IRL+F EL
Sbjct: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           K +GLLM+LSAANSLIKSFGN GLVEELLWVWRRMKENGIEPSL+TYNFLVNGLV+SMFI
Sbjct: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAERVFEVMD GKIVPDTVTYN+M+KGYC+AGK  KAMEKFR MEMKNV PDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSEGDFD+CLSLYLEMEE+G+EIPSHSYSLVIGGLCKQGKCMEAYAV EKMN+K  
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSKSG MGEAMRLF+RMKNEGLEPD VTYSVVVNGLCKSGRLE+AM 
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
           YFDFCR+KGV INAMFYAS+IDGLGKAGRI EAENLFEEMF KGCARDSYCYNA+IDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           K GKIDQAL LFGRME+EGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI PT A
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA R+KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLINGLRKAG++DLAIKLMHSKIGIGYDRMGSIKRRVKFRTLI+N
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 657

[Close]

BLAST of Moc04g01790 vs. NCBI nr
Match: XP_023554431.1 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1180.2 bits (3052), Expect = 0.0e+00
Identity = 585/657 (89.04%), Postives = 614/657 (93.46%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRRTLLRP F  SSSR L L+DPKS SLYRNGKL P +S+ NVT  FG N R VFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRSLPLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQ  DPSPWVAQILNLLDGS NMEANLDSFCR FLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           V+FVLQSVELR+ PEIA+RFFYW GKQKKYVHK+ECYVSLIELLTFSADLV+IRL+F EL
Sbjct: 121 VAFVLQSVELRDVPEIAIRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           K KGLLM+LSAANSLIKS GN GLVEELLWVWRRMKENGIEPSL+TYNFLVNGLV+SMFI
Sbjct: 181 KGKGLLMTLSAANSLIKSLGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAERVFEVMD GKIVPDTVTYN+M+KGYC+AGK  KAMEKFR MEMKNV PDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSEGDFD+CLSLYLEMEE+G+EIPSHSYSLVIGGLCKQGKCMEAYAVFEKMN+K  
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSKSG MGEAMRLFERMKNEGLEPD VTYSVVVNGLCKSGRLE+AM 
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
           YFDFCR+KGV INAMFYAS+IDGLGKAGRI EAENLFEEMF KGCARDSYCYNA+IDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           K GKIDQAL LFGRME+EGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI PT A
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA R+KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINVLCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLINGLRKAG++DLAIKLMHSKIGIGYDRMGSIKRRVKFRTLI+N
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 657

[Close]

BLAST of Moc04g01790 vs. ExPASy Swiss-Prot
Match: Q9LR67 (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g03560 PE=2 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 4.9e-266
Identity = 444/655 (67.79%), Postives = 536/655 (81.83%), Query Frame = 0


Query: 3   RTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLLPP 62
           R   R PF        H      C LY+NG    ++S+ +       + R VF ++ LPP
Sbjct: 2   RRFYRKPFSVPLLNRPHCSSQSHC-LYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSSLPP 61

Query: 63  PEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNFVS 122
           PEWIEPF DVSD+V S++ + PSPWV+QILNLLDGS +ME+NLD FCR FLIKLSPNFVS
Sbjct: 62  PEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVS 121

Query: 123 FVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFRELKD 182
           FVL+S E+REKP+IA  FF W+ KQKKY H LECYVSL+++L  + D+ RIR +  E+K 
Sbjct: 122 FVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKK 181

Query: 183 KGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFIES 242
               M++SAAN+LIKSFG LG+VEELLWVWR+MKENGIEP+L+TYNFL+NGLVS+MF++S
Sbjct: 182 FEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 241

Query: 243 AERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTLIQ 302
           AERVFEVM+SG+I PD VTYN M+KGYC+AG+TQKAMEK RDME +  + DKITYMT+IQ
Sbjct: 242 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 301

Query: 303 ACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGSRA 362
           ACY++ DF SC++LY EM+EKG+++P H++SLVIGGLCK+GK  E Y VFE M RKGS+ 
Sbjct: 302 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 361

Query: 363 NVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMGYF 422
           NVAIYT LID Y+KSG + +A+RL  RM +EG +PD VTYSVVVNGLCK+GR+E+A+ YF
Sbjct: 362 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 421

Query: 423 DFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALAKD 482
             CR  G+AIN+MFY+S+IDGLGKAGR++EAE LFEEM  KGC RDSYCYNALIDA  K 
Sbjct: 422 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 481

Query: 483 GKIDQALALFGRM-EDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAAS 542
            K+D+A+ALF RM E+EGCDQTVYTYTIL+ G+FKEHRNEEA+KLWD MIDKGI PTAA 
Sbjct: 482 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 541

Query: 543 FRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIVD 602
           FRAL+ GLCL GKVARACKILD+LAPMG+I + A EDMINTLCKAGRIKEACKLADGI +
Sbjct: 542 FRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITE 601

Query: 603 RGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQ 657
           RGRE+PGRIRTV+IN LRK G ADLA+KLMHSKIGIGY+RMGS+KRRVKF TL++
Sbjct: 602 RGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLE 655

[Close]

BLAST of Moc04g01790 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.6e-65
Identity = 173/614 (28.18%), Postives = 288/614 (46.91%), Query Frame = 0


Query: 56  TNTLLPPPEWIEPFVDVSDVVSS--SQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFL 115
           T+  +P P     F  VS ++ +   +  D      ++L++L   PN   +     ++ +
Sbjct: 29  TDVTVPSPVTRRQFCSVSPLLRNLPEEESDSMSVPHRLLSIL-SKPNWHKS--PSLKSMV 88

Query: 116 IKLSPNFVSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLT---FSADL 175
             +SP+ VS  L S++L   P+ AL F +W  +  +Y H +  Y SL+ LL    +   +
Sbjct: 89  SAISPSHVS-SLFSLDL--DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVV 148

Query: 176 VRIRLLF-------------------------RELKDKGLLMSLSAANSLIKSFGNLGLV 235
            +IRLL                           ELK K   + +   N+L+ S    GLV
Sbjct: 149 FKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYK---LIIGCYNTLLNSLARFGLV 208

Query: 236 EELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFIESAERVFEVMDSGKIVPDTVTYNIM 295
           +E+  V+  M E+ + P+++TYN +VNG      +E A +    +    + PD  TY  +
Sbjct: 209 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL 268

Query: 296 MKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTLIQACYSEGDFDSCLSLYLEMEEKGV 355
           + GYC+      A + F +M +K  + +++ Y  LI         D  + L+++M++   
Sbjct: 269 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 328

Query: 356 EIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGSRANVAIYTALIDSYSKSGCMGEAMR 415
                +Y+++I  LC   +  EA  + ++M   G + N+  YT LIDS        +A  
Sbjct: 329 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 388

Query: 416 LFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMGYFDFCRSKGVAINAMFYASIIDGLG 475
           L  +M  +GL P+ +TY+ ++NG CK G +EDA+   +   S+ ++ N   Y  +I G  
Sbjct: 389 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 448

Query: 476 KAGRIEEAENLFEEMFRKGCARDSYCYNALIDALAKDGKIDQALALFGRMEDEGCDQTVY 535
           K+  + +A  +  +M  +    D   YN+LID   + G  D A  L   M D G     +
Sbjct: 449 KS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 508

Query: 536 TYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAASFRALAIGLCLCGKVARACKILDDL 595
           TYT +ID L K  R EEA  L+D++  KG+ P    + AL  G C  GKV  A  +L+ +
Sbjct: 509 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 568

Query: 596 APMGLIPET-AFEDMINTLCKAGRIKEACKLADGIVDRGREIPGRIRTVLINGLRKAGDA 639
                +P +  F  +I+ LC  G++KEA  L + +V  G +      T+LI+ L K GD 
Sbjct: 569 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 628

[Close]

BLAST of Moc04g01790 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 9.2e-63
Identity = 156/549 (28.42%), Postives = 265/549 (48.27%), Query Frame = 0


Query: 124 VLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFRELKDK 183
           +L S+  +     ALR F    K+  +  +   Y  ++  L  S     ++ +  ++K  
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 184 GLLMSLSAANSLIKSFGNLGLVEELLWV--WRRMKENGIEPSLFTYNFLVNGLVSSMFIE 243
              M  S    LI+S+    L +E+L V  W  + E G++P    YN ++N LV    ++
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDW-MIDEFGLKPDTHFYNRMLNLLVDGNSLK 172

Query: 244 SAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTLI 303
             E     M    I PD  T+N+++K  CRA + + A+    DM    + PD+ T+ T++
Sbjct: 173 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 232

Query: 304 QACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKM-NRKGS 363
           Q    EGD D  L +  +M E G    + S ++++ G CK+G+  +A    ++M N+ G 
Sbjct: 233 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 292

Query: 364 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 423
             +   +  L++   K+G +  A+ + + M  EG +PD  TY+ V++GLCK G +++A+ 
Sbjct: 293 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 352

Query: 424 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAE-------------------------- 483
             D   ++  + N + Y ++I  L K  ++EEA                           
Sbjct: 353 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 412

Query: 484 ---------NLFEEMFRKGCARDSYCYNALIDALAKDGKIDQALALFGRMEDEGCDQTVY 543
                     LFEEM  KGC  D + YN LID+L   GK+D+AL +  +ME  GC ++V 
Sbjct: 413 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 472

Query: 544 TYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAASFRALAIGLCLCGKVARACKILDDL 603
           TY  LIDG  K ++  EA +++D M   G++  + ++  L  GLC   +V  A +++D +
Sbjct: 473 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 532

Query: 604 APMGLIPET-AFEDMINTLCKAGRIKEACKLADGIVDRGREIPGRIRTVLINGLRKAGDA 634
              G  P+   +  ++   C+ G IK+A  +   +   G E        LI+GL KAG  
Sbjct: 533 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 592

[Close]

BLAST of Moc04g01790 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.6e-60
Identity = 143/473 (30.23%), Postives = 228/473 (48.20%), Query Frame = 0


Query: 176 LFRELKDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLV 235
           L   +  KG    +     LIK F  L  + + + V   +++ G +P +F YN L+NG  
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 170

Query: 236 SSMFIESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKI 295
               I+ A RV + M S    PDTVTYNIM+   C  GK   A++    +   N +P  I
Sbjct: 171 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 230

Query: 296 TYMTLIQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKM 355
           TY  LI+A   EG  D  L L  EM  +G++    +Y+ +I G+CK+G    A+ +   +
Sbjct: 231 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 290

Query: 356 NRKGSRANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRL 415
             KG   +V  Y  L+ +    G   E  +L  +M +E  +P+ VTYS+++  LC+ G++
Sbjct: 291 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 350

Query: 416 EDAMGYFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNAL 475
           E+AM      + KG+  +A  Y  +I    + GR++ A    E M   GC  D   YN +
Sbjct: 351 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 410

Query: 476 IDALAKDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI 535
           +  L K+GK DQAL +FG++ + GC     +Y  +   L+       A+ +   M+  GI
Sbjct: 411 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 470

Query: 536 APTAASFRALAIGLCLCGKVARACKILDDLAPMGLIPE-TAFEDMINTLCKAGRIKEACK 595
            P   ++ ++   LC  G V  A ++L D+      P    +  ++   CKA RI++A  
Sbjct: 471 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 530

Query: 596 LADGIVDRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKR 648
           + + +V  G        TVLI G+  AG    A++L +  + I      S KR
Sbjct: 531 VLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKR 582

[Close]

BLAST of Moc04g01790 vs. ExPASy Swiss-Prot
Match: Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.7e-59
Identity = 144/506 (28.46%), Postives = 250/506 (49.41%), Query Frame = 0


Query: 118 PNFVSF--VLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRL 177
           P+ +++  +L  +    K + AL+ F     +K     L  Y  LI++L  +  L     
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVF--EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE 400

Query: 178 LFRELKDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLV 237
           L   ++  GL  ++   N ++        ++E   ++  M      P   T+  L++GL 
Sbjct: 401 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 460

Query: 238 SSMFIESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKI 297
               ++ A +V+E M       +++ Y  ++K +   G+ +   + ++DM  +N  PD  
Sbjct: 461 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 520

Query: 298 TYMTLIQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKM 357
              T +   +  G+ +   +++ E++ +     + SYS++I GL K G   E Y +F  M
Sbjct: 521 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 580

Query: 358 NRKGSRANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRL 417
             +G   +   Y  +ID + K G + +A +L E MK +G EP  VTY  V++GL K  RL
Sbjct: 581 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 640

Query: 418 EDAMGYFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNAL 477
           ++A   F+  +SK + +N + Y+S+IDG GK GRI+EA  + EE+ +KG   + Y +N+L
Sbjct: 641 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 700

Query: 478 IDALAKDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI 537
           +DAL K  +I++AL  F  M++  C     TY ILI+GL K  +  +A   W  M  +G+
Sbjct: 701 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 760

Query: 538 APTAASFRALAIGLCLCGKVARACKILDDLAPMGLIPETA-FEDMINTLCKAGRIKEACK 597
            P+  S+  +  GL   G +A A  + D     G +P++A +  MI  L    R  +A  
Sbjct: 761 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 820

Query: 598 LADGIVDRGREIPGRIRTVLINGLRK 621
           L +    RG  I  +   VL++ L K
Sbjct: 821 LFEETRRRGLPIHNKTCVVLLDTLHK 844

[Close]

BLAST of Moc04g01790 vs. ExPASy TrEMBL
Match: A0A6J1D2R3 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016800 PE=4 SV=1)

HSP 1 Score: 1325.8 bits (3430), Expect = 0.0e+00
Identity = 657/657 (100.00%), Postives = 657/657 (100.00%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL
Sbjct: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL
Sbjct: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI
Sbjct: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL
Sbjct: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS
Sbjct: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG
Sbjct: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
           YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA
Sbjct: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA
Sbjct: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 657

[Close]

BLAST of Moc04g01790 vs. ExPASy TrEMBL
Match: A0A6J1GLU6 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455532 PE=4 SV=1)

HSP 1 Score: 1181.8 bits (3056), Expect = 0.0e+00
Identity = 583/657 (88.74%), Postives = 615/657 (93.61%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRRTLLRP F  SSSRPL L+DPKS SLYRNGK+ P +S+ NVT  FG N R VFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKVSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQ  DPSPWVAQILNLLDGS NMEANLDSFCR FLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           V+FVLQSVELRE PEIA RFFYW GKQKKYVHK+ECYVSLIELLTFSADLV+IRL+F EL
Sbjct: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           K +GLLM+LSAANSLIKSFGN GLVEELLWVWRRMKENGIEPSL+TYNFLVNGLV+SMFI
Sbjct: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAERVFEVMD GKI+PDTVTYN+M+KGYC+AGK  KAMEKFR MEMKNV PDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIMPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSEGDFD+CLSLYLEMEE+G+EIPSHSYSLVIGGLCKQGKCMEAYAVFEKMN+K  
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSK+G MGEAMRLFERMKNEGLEPD VTYSVVVNGLCKSGRLE+AM 
Sbjct: 361 RANVAIYTALIDSYSKNGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
           YFDFCR+KGV INAMFYAS+IDGLGKAGRI EAENLFEEMF KGCARDSYCYNA+IDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           K GKIDQAL LFGRME+EGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI PT A
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA R+KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLINGLRKAG++DLAIKLMHSKIGIGYDRMGSIKRRVKFRTL++N
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLVEN 657

[Close]

BLAST of Moc04g01790 vs. ExPASy TrEMBL
Match: A0A6J1I1D4 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111468147 PE=4 SV=1)

HSP 1 Score: 1179.5 bits (3050), Expect = 0.0e+00
Identity = 585/657 (89.04%), Postives = 613/657 (93.30%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRRTLLRP F  SSSRPL L+DP S SLYRNGKL P +S+ NVT  FG   R VFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPNSYSLYRNGKLSPNSSDCNVTRGFGEYFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQ  DPSPWVAQILNLLDGS NMEANLDSFCR FLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           V+FVLQSVELRE PEIA+RFFYW GKQKKYVHK+ECYVSLIELLTFSADLV+IRL+F EL
Sbjct: 121 VAFVLQSVELREVPEIAIRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           K KGLLM+LSAANSLIKSFGN GLVEELLWVWRRM ENGIEPSL+TYNFLVNGLV+SMFI
Sbjct: 181 KGKGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMNENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAERVFEVMD GKIVPDTVTYN+M+KGYC+AGK  KAMEKFR MEMKNVKPDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSEGDFD+CLSLYLEMEE+G+EI SHSYSLVIGGLCKQGKCMEAYAVFEKMN+K  
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIASHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSKSG MGEAMRLFERMKNEGLEPD VTYSVVVNGLCKSGRLE+AM 
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
           YFDFCR+KGV INAMFYAS+IDGLGKAGRI EAENLFEEMF KGCARDSYCYNA+IDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           K GKIDQALALFGRME+EGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI PT A
Sbjct: 481 KHGKIDQALALFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA R KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRFKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLINGLRKAG++DLAIKLMHSKIGIGYDRMGSIKRRVKFRTL++N
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLVEN 657

[Close]

BLAST of Moc04g01790 vs. ExPASy TrEMBL
Match: A0A0A0K5P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047320 PE=4 SV=1)

HSP 1 Score: 1145.6 bits (2962), Expect = 0.0e+00
Identity = 565/657 (86.00%), Postives = 606/657 (92.24%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRR LLRP F  SSSRPLHL+DPKS SLY NGKL  + S+      F  N R VFTNTLL
Sbjct: 1   MRRALLRPSFRCSSSRPLHLLDPKSYSLYGNGKLSSKGSDYG----FSQNFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDV+SSSQ +DPSPWVAQILNLLDGS NME NLDSFCR F +KLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVISSSQPLDPSPWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           V+FVLQSVELREKPE+A+RFF+W GKQKKYVHK+EC+VSLIELLTFSADLV+IRL+F EL
Sbjct: 121 VTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFEL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           KD+GLLM+ SAANSLIKSFGNLGLVEELLWVWRRMKENGI+PSL+TYNFLVNGLV+SMFI
Sbjct: 181 KDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAE+VFEVMD GKIVPDTVTYNIM+KGYC+AGK QKAMEKFRDMEMKNVKPDKITYMTL
Sbjct: 241 ESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACYSE DFD+CLSLYLEMEE+G+EIP HSYSLVIGGLCKQ KCMEAYAVFE MN+KG 
Sbjct: 301 IQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGC 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALIDSYSK+G M EAMRLFERMKNEG EPD VTYSV+VNGLCKSGRL+D M 
Sbjct: 361 RANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGME 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
            FDFCR+KGVAINAMFYAS+IDGLGKAGRIE+AENLFEEM  KGCARDSYCYNA+IDALA
Sbjct: 421 LFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALA 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           K GKIDQALALFGRME+EGCDQTVYT+TILIDGLFKEH+NEEAIK WD MIDKGI PT A
Sbjct: 481 KHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMINTLCKA RIKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLIN LRKAG++DL IKLMHSKIGIGYDRMGSIKRRVKFRTL++N
Sbjct: 601 DRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRRVKFRTLLEN 653

[Close]

BLAST of Moc04g01790 vs. ExPASy TrEMBL
Match: A0A1S3C0U2 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495528 PE=4 SV=1)

HSP 1 Score: 1125.2 bits (2909), Expect = 0.0e+00
Identity = 559/657 (85.08%), Postives = 597/657 (90.87%), Query Frame = 0


Query: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60
           MRR+LLRP F  SSSR L L D KS SLY NGKL   +S+      F  N R VFTNTLL
Sbjct: 1   MRRSLLRPSFLCSSSRSLRLPDHKSYSLYENGKLSSTSSDYG----FSQNFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120
           PPPEWIEPFVDVSDV+SSS  +DPSPWV QILNLLDGS NME NLDSFCR F IKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVISSSSPLDPSPWVTQILNLLDGSSNMEHNLDSFCRKFFIKLSPNF 120

Query: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180
           V+FVLQSVELREKPEIA+RFF+W GKQKKYVHK+ECYVSLIELLTFSADLV+IR +F EL
Sbjct: 121 VTFVLQSVELREKPEIAVRFFFWAGKQKKYVHKIECYVSLIELLTFSADLVKIRSVFFEL 180

Query: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240
           KDK LLM+  AANSLIKSFGNLGLVEELLWVWRRMKENGI+PSL+TYNFLVNGLV+SMFI
Sbjct: 181 KDKDLLMTELAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300
           ESAE+VFEVMD GK VPDTVTYNIM+KGYC+AGK QKAMEKFRDMEMKNVKPDKITYMTL
Sbjct: 241 ESAEKVFEVMDGGKTVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360
           IQACY+E DFD+CLSLYLEMEE+G+EIPSHSYSLVIGGLCKQ KCMEAYAVFE MN+KG 
Sbjct: 301 IQACYAERDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQRKCMEAYAVFETMNQKGC 360

Query: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420
           RANVAIYTALID+YSKSG M EAMRLFERMKNEG EPD VTYSV+VNGLCKSGR+ED M 
Sbjct: 361 RANVAIYTALIDTYSKSGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRVEDGME 420

Query: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480
            F FCR+KGVAINAMFYAS+IDGLGKAGRIE+AENLFEEM  KGCARDSYCYNA+IDAL 
Sbjct: 421 LFYFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALT 480

Query: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540
           K GKIDQALALFGRME+EGCDQTVYT+TILIDGLFKEH+NEEAIKLWD MIDKGI PT A
Sbjct: 481 KHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKLWDKMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMINTLCKA RIKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 658
           DRGREIPGRIRTVLIN LRKAG++DL IKLMHSKIGIGYDRMGSIKRRVKFRTL++N
Sbjct: 601 DRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRRVKFRTLLEN 653

[Close]

BLAST of Moc04g01790 vs. TAIR 10
Match: AT1G03560.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 918.3 bits (2372), Expect = 3.5e-267
Identity = 444/655 (67.79%), Postives = 536/655 (81.83%), Query Frame = 0


Query: 3   RTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLLPP 62
           R   R PF        H      C LY+NG    ++S+ +       + R VF ++ LPP
Sbjct: 2   RRFYRKPFSVPLLNRPHCSSQSHC-LYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSSLPP 61

Query: 63  PEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNFVS 122
           PEWIEPF DVSD+V S++ + PSPWV+QILNLLDGS +ME+NLD FCR FLIKLSPNFVS
Sbjct: 62  PEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVS 121

Query: 123 FVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFRELKD 182
           FVL+S E+REKP+IA  FF W+ KQKKY H LECYVSL+++L  + D+ RIR +  E+K 
Sbjct: 122 FVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKK 181

Query: 183 KGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFIES 242
               M++SAAN+LIKSFG LG+VEELLWVWR+MKENGIEP+L+TYNFL+NGLVS+MF++S
Sbjct: 182 FEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 241

Query: 243 AERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTLIQ 302
           AERVFEVM+SG+I PD VTYN M+KGYC+AG+TQKAMEK RDME +  + DKITYMT+IQ
Sbjct: 242 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 301

Query: 303 ACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGSRA 362
           ACY++ DF SC++LY EM+EKG+++P H++SLVIGGLCK+GK  E Y VFE M RKGS+ 
Sbjct: 302 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 361

Query: 363 NVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMGYF 422
           NVAIYT LID Y+KSG + +A+RL  RM +EG +PD VTYSVVVNGLCK+GR+E+A+ YF
Sbjct: 362 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 421

Query: 423 DFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALAKD 482
             CR  G+AIN+MFY+S+IDGLGKAGR++EAE LFEEM  KGC RDSYCYNALIDA  K 
Sbjct: 422 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 481

Query: 483 GKIDQALALFGRM-EDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAAS 542
            K+D+A+ALF RM E+EGCDQTVYTYTIL+ G+FKEHRNEEA+KLWD MIDKGI PTAA 
Sbjct: 482 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 541

Query: 543 FRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIVD 602
           FRAL+ GLCL GKVARACKILD+LAPMG+I + A EDMINTLCKAGRIKEACKLADGI +
Sbjct: 542 FRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITE 601

Query: 603 RGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQ 657
           RGRE+PGRIRTV+IN LRK G ADLA+KLMHSKIGIGY+RMGS+KRRVKF TL++
Sbjct: 602 RGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLE 655

[Close]

BLAST of Moc04g01790 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-66
Identity = 173/614 (28.18%), Postives = 288/614 (46.91%), Query Frame = 0


Query: 56  TNTLLPPPEWIEPFVDVSDVVSS--SQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFL 115
           T+  +P P     F  VS ++ +   +  D      ++L++L   PN   +     ++ +
Sbjct: 29  TDVTVPSPVTRRQFCSVSPLLRNLPEEESDSMSVPHRLLSIL-SKPNWHKS--PSLKSMV 88

Query: 116 IKLSPNFVSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLT---FSADL 175
             +SP+ VS  L S++L   P+ AL F +W  +  +Y H +  Y SL+ LL    +   +
Sbjct: 89  SAISPSHVS-SLFSLDL--DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVV 148

Query: 176 VRIRLLF-------------------------RELKDKGLLMSLSAANSLIKSFGNLGLV 235
            +IRLL                           ELK K   + +   N+L+ S    GLV
Sbjct: 149 FKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYK---LIIGCYNTLLNSLARFGLV 208

Query: 236 EELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFIESAERVFEVMDSGKIVPDTVTYNIM 295
           +E+  V+  M E+ + P+++TYN +VNG      +E A +    +    + PD  TY  +
Sbjct: 209 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL 268

Query: 296 MKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTLIQACYSEGDFDSCLSLYLEMEEKGV 355
           + GYC+      A + F +M +K  + +++ Y  LI         D  + L+++M++   
Sbjct: 269 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 328

Query: 356 EIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGSRANVAIYTALIDSYSKSGCMGEAMR 415
                +Y+++I  LC   +  EA  + ++M   G + N+  YT LIDS        +A  
Sbjct: 329 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 388

Query: 416 LFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMGYFDFCRSKGVAINAMFYASIIDGLG 475
           L  +M  +GL P+ +TY+ ++NG CK G +EDA+   +   S+ ++ N   Y  +I G  
Sbjct: 389 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 448

Query: 476 KAGRIEEAENLFEEMFRKGCARDSYCYNALIDALAKDGKIDQALALFGRMEDEGCDQTVY 535
           K+  + +A  +  +M  +    D   YN+LID   + G  D A  L   M D G     +
Sbjct: 449 KS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 508

Query: 536 TYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAASFRALAIGLCLCGKVARACKILDDL 595
           TYT +ID L K  R EEA  L+D++  KG+ P    + AL  G C  GKV  A  +L+ +
Sbjct: 509 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 568

Query: 596 APMGLIPET-AFEDMINTLCKAGRIKEACKLADGIVDRGREIPGRIRTVLINGLRKAGDA 639
                +P +  F  +I+ LC  G++KEA  L + +V  G +      T+LI+ L K GD 
Sbjct: 569 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 628

[Close]

BLAST of Moc04g01790 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 243.0 bits (619), Expect = 6.5e-64
Identity = 156/549 (28.42%), Postives = 265/549 (48.27%), Query Frame = 0


Query: 124 VLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFRELKDK 183
           +L S+  +     ALR F    K+  +  +   Y  ++  L  S     ++ +  ++K  
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 184 GLLMSLSAANSLIKSFGNLGLVEELLWV--WRRMKENGIEPSLFTYNFLVNGLVSSMFIE 243
              M  S    LI+S+    L +E+L V  W  + E G++P    YN ++N LV    ++
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDW-MIDEFGLKPDTHFYNRMLNLLVDGNSLK 172

Query: 244 SAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTLI 303
             E     M    I PD  T+N+++K  CRA + + A+    DM    + PD+ T+ T++
Sbjct: 173 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 232

Query: 304 QACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKM-NRKGS 363
           Q    EGD D  L +  +M E G    + S ++++ G CK+G+  +A    ++M N+ G 
Sbjct: 233 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 292

Query: 364 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 423
             +   +  L++   K+G +  A+ + + M  EG +PD  TY+ V++GLCK G +++A+ 
Sbjct: 293 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 352

Query: 424 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAE-------------------------- 483
             D   ++  + N + Y ++I  L K  ++EEA                           
Sbjct: 353 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 412

Query: 484 ---------NLFEEMFRKGCARDSYCYNALIDALAKDGKIDQALALFGRMEDEGCDQTVY 543
                     LFEEM  KGC  D + YN LID+L   GK+D+AL +  +ME  GC ++V 
Sbjct: 413 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 472

Query: 544 TYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAASFRALAIGLCLCGKVARACKILDDL 603
           TY  LIDG  K ++  EA +++D M   G++  + ++  L  GLC   +V  A +++D +
Sbjct: 473 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 532

Query: 604 APMGLIPET-AFEDMINTLCKAGRIKEACKLADGIVDRGREIPGRIRTVLINGLRKAGDA 634
              G  P+   +  ++   C+ G IK+A  +   +   G E        LI+GL KAG  
Sbjct: 533 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 592

[Close]

BLAST of Moc04g01790 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 233.8 bits (595), Expect = 4.0e-61
Identity = 143/473 (30.23%), Postives = 228/473 (48.20%), Query Frame = 0


Query: 176 LFRELKDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLV 235
           L   +  KG    +     LIK F  L  + + + V   +++ G +P +F YN L+NG  
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 170

Query: 236 SSMFIESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKI 295
               I+ A RV + M S    PDTVTYNIM+   C  GK   A++    +   N +P  I
Sbjct: 171 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 230

Query: 296 TYMTLIQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKM 355
           TY  LI+A   EG  D  L L  EM  +G++    +Y+ +I G+CK+G    A+ +   +
Sbjct: 231 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 290

Query: 356 NRKGSRANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRL 415
             KG   +V  Y  L+ +    G   E  +L  +M +E  +P+ VTYS+++  LC+ G++
Sbjct: 291 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 350

Query: 416 EDAMGYFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNAL 475
           E+AM      + KG+  +A  Y  +I    + GR++ A    E M   GC  D   YN +
Sbjct: 351 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 410

Query: 476 IDALAKDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI 535
           +  L K+GK DQAL +FG++ + GC     +Y  +   L+       A+ +   M+  GI
Sbjct: 411 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 470

Query: 536 APTAASFRALAIGLCLCGKVARACKILDDLAPMGLIPE-TAFEDMINTLCKAGRIKEACK 595
            P   ++ ++   LC  G V  A ++L D+      P    +  ++   CKA RI++A  
Sbjct: 471 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 530

Query: 596 LADGIVDRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKR 648
           + + +V  G        TVLI G+  AG    A++L +  + I      S KR
Sbjct: 531 VLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKR 582

[Close]

BLAST of Moc04g01790 vs. TAIR 10
Match: AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 230.7 bits (587), Expect = 3.3e-60
Identity = 144/506 (28.46%), Postives = 250/506 (49.41%), Query Frame = 0


Query: 118 PNFVSF--VLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRL 177
           P+ +++  +L  +    K + AL+ F     +K     L  Y  LI++L  +  L     
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVF--EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE 400

Query: 178 LFRELKDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLV 237
           L   ++  GL  ++   N ++        ++E   ++  M      P   T+  L++GL 
Sbjct: 401 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 460

Query: 238 SSMFIESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKI 297
               ++ A +V+E M       +++ Y  ++K +   G+ +   + ++DM  +N  PD  
Sbjct: 461 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 520

Query: 298 TYMTLIQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKM 357
              T +   +  G+ +   +++ E++ +     + SYS++I GL K G   E Y +F  M
Sbjct: 521 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 580

Query: 358 NRKGSRANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRL 417
             +G   +   Y  +ID + K G + +A +L E MK +G EP  VTY  V++GL K  RL
Sbjct: 581 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 640

Query: 418 EDAMGYFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNAL 477
           ++A   F+  +SK + +N + Y+S+IDG GK GRI+EA  + EE+ +KG   + Y +N+L
Sbjct: 641 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 700

Query: 478 IDALAKDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI 537
           +DAL K  +I++AL  F  M++  C     TY ILI+GL K  +  +A   W  M  +G+
Sbjct: 701 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 760

Query: 538 APTAASFRALAIGLCLCGKVARACKILDDLAPMGLIPETA-FEDMINTLCKAGRIKEACK 597
            P+  S+  +  GL   G +A A  + D     G +P++A +  MI  L    R  +A  
Sbjct: 761 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 820

Query: 598 LADGIVDRGREIPGRIRTVLINGLRK 621
           L +    RG  I  +   VL++ L K
Sbjct: 821 LFEETRRRGLPIHNKTCVVLLDTLHK 844

The following BLAST results are available for this feature:

BLAST of Moc04g01790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148014.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Momordica ...	[more]
KAG6572351.1	0.0e+00	89.04	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022953016.1	0.0e+00	88.74	pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita ...	[more]
KAG7011962.1	0.0e+00	88.89	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023554431.1	0.0e+00	89.04	pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita ...	[more]

BLAST of Moc04g01790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LR67	4.9e-266	67.79	Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidop...	[more]
Q9LSL9	2.6e-65	28.18	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q9LFF1	9.2e-63	28.42	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9SR00	5.6e-60	30.23	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]
Q9M907	4.7e-59	28.46	Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX...	[more]

BLAST of Moc04g01790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2R3	0.0e+00	100.00	pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Momordic...	[more]
A0A6J1GLU6	0.0e+00	88.74	pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucurbit...	[more]
A0A6J1I1D4	0.0e+00	89.04	pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucurbit...	[more]
A0A0A0K5P5	0.0e+00	86.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047320 PE=4 SV=1	[more]
A0A1S3C0U2	0.0e+00	85.08	pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucumis ...	[more]

BLAST of Moc04g01790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03560.1	3.5e-267	67.79	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G65560.1	1.8e-66	28.18	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53700.1	6.5e-64	28.42	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G04760.1	4.0e-61	30.23	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G06920.1	3.3e-60	28.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 176..232 e-value: 3.0E-8 score: 33.6
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 428..460 e-value: 2.2E-7 score: 30.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 257..304 e-value: 6.3E-16 score: 58.3 coord: 363..411 e-value: 5.4E-17 score: 61.7 coord: 468..516 e-value: 1.9E-14 score: 53.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 260..293 e-value: 2.3E-10 score: 38.0 coord: 330..363 e-value: 5.3E-5 score: 21.1 coord: 366..399 e-value: 1.2E-9 score: 35.8 coord: 400..433 e-value: 2.2E-5 score: 22.3 coord: 193..223 e-value: 1.2E-4 score: 20.0 coord: 505..538 e-value: 3.9E-7 score: 27.8 coord: 470..500 e-value: 2.2E-8 score: 31.7 coord: 295..326 e-value: 1.0E-5 score: 23.3 coord: 437..468 e-value: 1.8E-8 score: 32.0 coord: 225..259 e-value: 2.7E-4 score: 18.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 579..600 e-value: 0.58 score: 10.5 coord: 331..359 e-value: 6.3E-6 score: 26.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 188..222 score: 10.851745
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 468..502 score: 12.309597
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 503..537 score: 11.958836
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 293..327 score: 10.873667
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 363..397 score: 13.252269
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 433..467 score: 12.013642
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 328..362 score: 10.380408
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 398..432 score: 11.268274
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 223..257 score: 9.481582
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 258..292 score: 13.93187
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 240..286 e-value: 1.2E-12 score: 49.8 coord: 359..424 e-value: 3.5E-21 score: 77.6 coord: 496..568 e-value: 1.1E-15 score: 59.6 coord: 425..495 e-value: 3.6E-19 score: 71.0 coord: 573..634 e-value: 2.8E-6 score: 28.9 coord: 287..358 e-value: 4.5E-18 score: 67.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 88..239 e-value: 4.4E-21 score: 77.0
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 42..656
None	No IPR available	PANTHER	PTHR47934:SF12	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 42..656
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 296..536

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g01790.1	Moc04g01790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding