Moc04g01310 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g01310
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L11
Location	chr4: 866694 .. 868169 (+)
RNA-Seq Expression	Moc04g01310
Synteny	Moc04g01310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTTTCTCCGATTCGTGTTTTTCTCTCCCATTAGATTGTTAAAACTTCTATAATTGTGTTTTATTCCTGCTCCCTAATCCTCTGCATCTGTTAATATGGCGCAGGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTAGTACAAACTTCACCGAGTTCTGTGCATTTTGTCTGCTGATTTGGTTGCTTCTAGTTTTTGTTTCCGCGATTTATAGTTCACTTTTCTTAGGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGGTACAACTTTTTTTTCCTCATCTCGTACCCGCTTGATTAAGACTACAAAATGGTTCGGATGAAAACGAGTAAATATATATTTGAAGAGAAATCTAGAGTCGCACCTTAGGGCTGATTAATCGTGGGATTTAGGTTTATGAGATGCAAAACTACTTATTTCGAGTTTATGATTTTATGATTCAGAACTGGAAATAAAGTTATCTTTGAAAGTCATATCACAATATTGGATCTGATAGAATAATTTGTTGGTGGGTTTTTTCTCTCTTGTGAACAATAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTAAGTTTAAGCCCAAACCCATCTGAATCTCCCTTCAATTATGTTCAAATTTTTTGTCTGAAACTTACTGCCATGTGATCAATTTCCTCAGAGATCTGTAGTCTAATTTGCTTAGGTGATTCTGTTTTGATTTGTATGCCAAAATAGTTATATTCAAATGCAACATTCATTGGGTTGAGGTATTTGTCAATGTTAAATATTTGATTAAGTATGACAACTTTTGCTGCCCAAAGGAGATGGTGATCGAAATTCCCGGTAGTTTTGGAAACAGGGAACAGGATCCCTAATCCCTGTCCTAACTGATGTGCTTGTCGGGATTGAAATGATCTGGAAGGACGGGAATAGGGGAGGGAGGGACATTCCTGACCCTTCATGAGTGATGACATCTCTATCTATGAAGTTTACCTTTAAACAATCTTGTTTGTTTATGTGCTATTGTATGACATTTCAGGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACTGGTTAA

mRNA sequence

ATGGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACTGGTTAA

Coding sequence (CDS)

ATGGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACTGGTTAA

Protein sequence

MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAITG

Homology

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BLAST of Moc04g01310 vs. NCBI nr
Match: XP_022148026.1 (60S ribosomal protein L11 isoform X2 [Momordica charantia])

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

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BLAST of Moc04g01310 vs. NCBI nr
Match: XP_022148025.1 (60S ribosomal protein L11 isoform X1 [Momordica charantia])

HSP 1 Score: 363.6 bits (932), Expect = 9.8e-97
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 61
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI
Sbjct: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 63

Query: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 64  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 123

Query: 122 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 181
           TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT
Sbjct: 124 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 183

Query: 182 G 183
           G
Sbjct: 184 G 184

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BLAST of Moc04g01310 vs. NCBI nr
Match: XP_004133952.1 (60S ribosomal protein L11-1 isoform X2 [Cucumis sativus] >XP_008438244.1 PREDICTED: 60S ribosomal protein L11-1-like isoform X2 [Cucumis melo] >XP_038886887.1 60S ribosomal protein L11-1-like isoform X2 [Benincasa hispida] >KGN56659.1 hypothetical protein Csa_011743 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 1.3e-96
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

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BLAST of Moc04g01310 vs. NCBI nr
Match: XP_004133951.1 (60S ribosomal protein L11 isoform X1 [Cucumis sativus] >XP_008438243.1 PREDICTED: 60S ribosomal protein L11-like isoform X1 [Cucumis melo] >XP_038886885.1 60S ribosomal protein L11-like isoform X1 [Benincasa hispida] >KAA0049088.1 60S ribosomal protein L11 isoform X1 [Cucumis melo var. makuwa] >TYK17475.1 60S ribosomal protein L11 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 361.7 bits (927), Expect = 3.7e-96
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 61
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI
Sbjct: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 63

Query: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 64  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 123

Query: 122 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 181
           TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ IT
Sbjct: 124 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQIT 183

Query: 182 G 183
           G
Sbjct: 184 G 184

[Close]

BLAST of Moc04g01310 vs. NCBI nr
Match: OVA17001.1 (Ribosomal protein L5 [Macleaya cordata])

HSP 1 Score: 360.5 bits (924), Expect = 8.3e-96
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

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BLAST of Moc04g01310 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 6.0e-97
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 6.0e-97
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 6.0e-97
Identity = 175/180 (97.22%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDFFVVLERPGYRVGRRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQAI
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180

[Close]

BLAST of Moc04g01310 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 345.9 bits (886), Expect = 2.8e-94
Identity = 172/181 (95.03%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLER GYRV RRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK+QA 
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 180

Query: 181 T 182
           T
Sbjct: 181 T 181

[Close]

BLAST of Moc04g01310 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 2.8e-94
Identity = 172/181 (95.03%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLER GYRV RRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK+QA 
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 180

Query: 181 T 182
           T
Sbjct: 181 T 181

[Close]

BLAST of Moc04g01310 vs. ExPASy TrEMBL
Match: A0A6J1D446 (60S ribosomal protein L11 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016813 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.6e-97
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. ExPASy TrEMBL
Match: A0A6J1D1S0 (60S ribosomal protein L11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016813 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.8e-97
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 61
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI
Sbjct: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 63

Query: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 64  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 123

Query: 122 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 181
           TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT
Sbjct: 124 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 183

Query: 182 G 183
           G
Sbjct: 184 G 184

[Close]

BLAST of Moc04g01310 vs. ExPASy TrEMBL
Match: A0A0A0L6K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127210 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.2e-97
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. ExPASy TrEMBL
Match: A0A1S3AW09 (60S ribosomal protein L11-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483409 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.2e-97
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. ExPASy TrEMBL
Match: A0A5A7U1I5 (60S ribosomal protein L11 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003400 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 61
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI
Sbjct: 4   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 63

Query: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 64  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 123

Query: 122 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 181
           TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQ IT
Sbjct: 124 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQIT 183

Query: 182 G 183
           G
Sbjct: 184 G 184

[Close]

BLAST of Moc04g01310 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 354.8 bits (909), Expect = 4.3e-98
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 354.8 bits (909), Expect = 4.3e-98
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 354.8 bits (909), Expect = 4.3e-98
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 354.8 bits (909), Expect = 4.3e-98
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 180
           STGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Moc04g01310 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 336.3 bits (861), Expect = 1.6e-92
Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 11  MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 70
           MRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACY
Sbjct: 1   MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 60

Query: 71  VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFF 130
           VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+
Sbjct: 61  VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 120

Query: 131 VVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAITG 183
           VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ ITG
Sbjct: 121 VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 172

The following BLAST results are available for this feature:

BLAST of Moc04g01310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148026.1	3.4e-97	100.00	60S ribosomal protein L11 isoform X2 [Momordica charantia]	[more]
XP_022148025.1	9.8e-97	100.00	60S ribosomal protein L11 isoform X1 [Momordica charantia]	[more]
XP_004133952.1	1.3e-96	99.45	60S ribosomal protein L11-1 isoform X2 [Cucumis sativus] >XP_008438244.1 PREDICT...	[more]
XP_004133951.1	3.7e-96	99.45	60S ribosomal protein L11 isoform X1 [Cucumis sativus] >XP_008438243.1 PREDICTED...	[more]
OVA17001.1	8.3e-96	98.35	Ribosomal protein L5 [Macleaya cordata]	[more]

BLAST of Moc04g01310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42795	6.0e-97	96.15	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]
P42794	6.0e-97	96.15	60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2	[more]
P46287	6.0e-97	97.22	60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1	[more]
A2YDY2	2.8e-94	95.03	60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S...	[more]
Q0DK10	2.8e-94	95.03	60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2...	[more]

BLAST of Moc04g01310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D446	1.6e-97	100.00	60S ribosomal protein L11 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1D1S0	4.8e-97	100.00	60S ribosomal protein L11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A0A0L6K1	6.2e-97	99.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127210 PE=3 SV=1	[more]
A0A1S3AW09	6.2e-97	99.45	60S ribosomal protein L11-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483...	[more]
A0A5A7U1I5	1.8e-96	99.45	60S ribosomal protein L11 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Moc04g01310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42740.1	4.3e-98	96.15	ribosomal protein large subunit 16A	[more]
AT3G58700.1	4.3e-98	96.15	Ribosomal L5P family protein	[more]
AT4G18730.1	4.3e-98	96.15	ribosomal protein L16B	[more]
AT5G45775.2	4.3e-98	96.15	Ribosomal L5P family protein	[more]
AT5G45775.1	1.6e-92	95.93	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031309	Ribosomal protein L5, C-terminal	PFAM	PF00673	Ribosomal_L5_C	coord: 66..164 e-value: 8.9E-21 score: 73.9
IPR031310	Ribosomal protein L5, N-terminal	PFAM	PF00281	Ribosomal_L5	coord: 9..62 e-value: 8.7E-21 score: 74.0
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 2..177 e-value: 1.8E-72 score: 244.6
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 8..173
IPR002132	Ribosomal protein L5	PIRSF	PIRSF002161	RPL5p_RPL5a_RPL11e_RPL5o	coord: 1..172 e-value: 9.4E-43 score: 143.8
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 1..181
None	No IPR available	PANTHER	PTHR11994:SF31	60S RIBOSOMAL PROTEIN L11-1	coord: 1..181
IPR020929	Ribosomal protein L5, conserved site	PROSITE	PS00358	RIBOSOMAL_L5	coord: 39..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g01310.1	Moc04g01310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome