Moc04g01020 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g01020
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr4: 690223 .. 690513 (+)
RNA-Seq Expression	Moc04g01020
Synteny	Moc04g01020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCGCCGCCGTCCGATCTCACTCTGGCAAGGAGAATCTCCCGCCGTTTTCTCAGAAGCCGTTTCCCCCAAATGCGAAGAAATCCACTAGAAGGAGATTGAATCGGAAGCCGCTCGCCGATATTACCTATTTGTTCGAGAACACTGTTCAATTCGGTTCGATTTTGGTTCAGGATCGATGGATCTCCTCTGAATCGGCTTGTTCTCTGTCGAATTCGAGGAAAAGGAAGGCTGCCGATGAAATTTGTTCTGCAACTGCTAAATCGCTTAGAATGGGATTCAGATAA

mRNA sequence

ATGGAGTTCGCCGCCGTCCGATCTCACTCTGGCAAGGAGAATCTCCCGCCGTTTTCTCAGAAGCCGTTTCCCCCAAATGCGAAGAAATCCACTAGAAGGAGATTGAATCGGAAGCCGCTCGCCGATATTACCTATTTGTTCGAGAACACTGTTCAATTCGGTTCGATTTTGGTTCAGGATCGATGGATCTCCTCTGAATCGGCTTGTTCTCTGTCGAATTCGAGGAAAAGGAAGGCTGCCGATGAAATTTGTTCTGCAACTGCTAAATCGCTTAGAATGGGATTCAGATAA

Coding sequence (CDS)

ATGGAGTTCGCCGCCGTCCGATCTCACTCTGGCAAGGAGAATCTCCCGCCGTTTTCTCAGAAGCCGTTTCCCCCAAATGCGAAGAAATCCACTAGAAGGAGATTGAATCGGAAGCCGCTCGCCGATATTACCTATTTGTTCGAGAACACTGTTCAATTCGGTTCGATTTTGGTTCAGGATCGATGGATCTCCTCTGAATCGGCTTGTTCTCTGTCGAATTCGAGGAAAAGGAAGGCTGCCGATGAAATTTGTTCTGCAACTGCTAAATCGCTTAGAATGGGATTCAGATAA

Protein sequence

MEFAAVRSHSGKENLPPFSQKPFPPNAKKSTRRRLNRKPLADITYLFENTVQFGSILVQDRWISSESACSLSNSRKRKAADEICSATAKSLRMGFR

Homology

[Close]

BLAST of Moc04g01020 vs. NCBI nr
Match: KAG6589263.1 (hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23
Identity = 70/97 (72.16%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MEFAAVRSHSGKENLPPFSQKPFPPNAKKS-TRRRLNRKPLADITYLFENTVQFGSILVQ 60
          MEFAAVR  SGKENLP  SQK FPPN KK  TRRRLNRKPLADIT  FE++V+F    VQ
Sbjct: 1  MEFAAVRFPSGKENLPLLSQKQFPPNQKKPITRRRLNRKPLADITNSFESSVRFS--FVQ 60

Query: 61 DRWISSESACSLSNSRKRKAADEICSATAKSLRMGFR 97
          D   S ES C   NS+KRKAADEICS TAKSLRMGFR
Sbjct: 61 DHSGSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR 95

[Close]

BLAST of Moc04g01020 vs. NCBI nr
Match: KGN47955.1 (hypothetical protein Csa_002785 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-21
Identity = 66/98 (67.35%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1   MEFAAVRSHSGKENLPPFSQKPFPPNAKKST-RRRLNRKPLADITYLFENTVQFGSILVQ 60
           MEF+AVR HS KENLPPF+ K +P   KK T RRRLNRKPL DIT  FENT++ GSI  Q
Sbjct: 61  MEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTIRLGSI--Q 120

Query: 61  DRWISS-ESACSLSNSRKRKAADEICSATAKSLRMGFR 97
           D +I+S ES C   NSRKRKA DE+ S TAKSLRMGFR
Sbjct: 121 DGFIASVESVCLQPNSRKRKAGDEVYSGTAKSLRMGFR 156

[Close]

BLAST of Moc04g01020 vs. NCBI nr
Match: OAY33953.1 (hypothetical protein MANES_13G138400v8 [Manihot esculenta])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08
Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 1   MEFAA--VRSHSGKENLPPFSQKPFPP------NAKKSTRRRLNRKPLADITYLFENTVQ 60
           MEF A     HS KEN+PPFS KP  P      ++KK  RRR+ R+PL DITY + ++VQ
Sbjct: 1   MEFTAKLCDHHSNKENIPPFSAKPANPIPASVASSKKKFRRRI-REPLEDITYFYRSSVQ 60

Query: 61  FGSILVQDRWISSESACSLSNSRKRKAADE-------ICSATAKSLRMGFR 97
                  D   +   + S SNS+KRKA+D+       +   ++KSLR GFR
Sbjct: 61  LALAQEDDSLSAISVSGSASNSKKRKASDQENEDTGAVAGPSSKSLRFGFR 110

[Close]

BLAST of Moc04g01020 vs. NCBI nr
Match: CAB4303764.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 64.3 bits (155), Expect = 6.5e-07
Identity = 52/120 (43.33%), Postives = 61/120 (50.83%), Query Frame = 0


Query: 1   MEFAAVRSHSGKENLPPFS-----QKPFPPNAKKS----TRRRLNRKPLADIT--YLFEN 60
           ME  A R HS KENLPP S       P P N   S     + RL RKPLADIT  Y++ N
Sbjct: 1   MEAIACRDHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 61  TVQFG------SILVQDRWISSESACSLSNSRKRKAADE-------ICSATAKSLRMGFR 97
              FG      S  +     SS  + S SNSRKRK+  E       + S+ +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSIVNSSNSKSLRMGFR 120

[Close]

BLAST of Moc04g01020 vs. NCBI nr
Match: CAB4273203.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 64.3 bits (155), Expect = 6.5e-07
Identity = 52/120 (43.33%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 1   MEFAAVRSHSGKENLPPFS-----QKPFPPNAKKS----TRRRLNRKPLADIT--YLFEN 60
           ME +A R HS KENLPP S       P P N   S     + RL RKPLADIT  Y++ N
Sbjct: 1   MEASACRYHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 61  TVQFG------SILVQDRWISSESACSLSNSRKRKAADE-------ICSATAKSLRMGFR 97
              FG      S  +     SS  + S SNSRKRK+  E       + S+ +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSKVNSSNSKSLRMGFR 120

[Close]

BLAST of Moc04g01020 vs. ExPASy TrEMBL
Match: A0A0A0KE31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.7e-22
Identity = 66/98 (67.35%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1   MEFAAVRSHSGKENLPPFSQKPFPPNAKKST-RRRLNRKPLADITYLFENTVQFGSILVQ 60
           MEF+AVR HS KENLPPF+ K +P   KK T RRRLNRKPL DIT  FENT++ GSI  Q
Sbjct: 61  MEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTIRLGSI--Q 120

Query: 61  DRWISS-ESACSLSNSRKRKAADEICSATAKSLRMGFR 97
           D +I+S ES C   NSRKRKA DE+ S TAKSLRMGFR
Sbjct: 121 DGFIASVESVCLQPNSRKRKAGDEVYSGTAKSLRMGFR 156

[Close]

BLAST of Moc04g01020 vs. ExPASy TrEMBL
Match: A0A2C9URL6 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G138400 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.8e-09
Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 1   MEFAA--VRSHSGKENLPPFSQKPFPP------NAKKSTRRRLNRKPLADITYLFENTVQ 60
           MEF A     HS KEN+PPFS KP  P      ++KK  RRR+ R+PL DITY + ++VQ
Sbjct: 1   MEFTAKLCDHHSNKENIPPFSAKPANPIPASVASSKKKFRRRI-REPLEDITYFYRSSVQ 60

Query: 61  FGSILVQDRWISSESACSLSNSRKRKAADE-------ICSATAKSLRMGFR 97
                  D   +   + S SNS+KRKA+D+       +   ++KSLR GFR
Sbjct: 61  LALAQEDDSLSAISVSGSASNSKKRKASDQENEDTGAVAGPSSKSLRFGFR 110

[Close]

BLAST of Moc04g01020 vs. ExPASy TrEMBL
Match: A0A7N2R9E8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.8e-08
Identity = 53/109 (48.62%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 1   MEFAAVRSHSGKENLPPFSQK---PFPPNA---KKSTRRRLNRKPLADITYLFENTVQFG 60
           ME  A    + KEN+PPFS K   P P NA   KK+ +RRL RKPLADIT LF ++ Q  
Sbjct: 1   MEGIAFCDCNNKENIPPFSTKRANPVPANALSSKKTNKRRL-RKPLADITNLFYDSFQPS 60

Query: 61  SI--LVQDRWISSESACSLSNSRKRKA-----ADEICSATAKSLRMGFR 97
           S+   V     SS S+ S+SN RKRKA     + E+ ++ +KSLRMGFR
Sbjct: 61  SVPESVYLLLSSSASSVSVSNPRKRKATLKTGSVEVATSNSKSLRMGFR 108

[Close]

BLAST of Moc04g01020 vs. ExPASy TrEMBL
Match: A0A6J5WXG2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20403 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.2e-07
Identity = 52/120 (43.33%), Postives = 61/120 (50.83%), Query Frame = 0


Query: 1   MEFAAVRSHSGKENLPPFS-----QKPFPPNAKKS----TRRRLNRKPLADIT--YLFEN 60
           ME  A R HS KENLPP S       P P N   S     + RL RKPLADIT  Y++ N
Sbjct: 1   MEAIACRDHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 61  TVQFG------SILVQDRWISSESACSLSNSRKRKAADE-------ICSATAKSLRMGFR 97
              FG      S  +     SS  + S SNSRKRK+  E       + S+ +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSIVNSSNSKSLRMGFR 120

[Close]

BLAST of Moc04g01020 vs. ExPASy TrEMBL
Match: A0A6J5UAF7 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20443 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.2e-07
Identity = 52/120 (43.33%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 1   MEFAAVRSHSGKENLPPFS-----QKPFPPNAKKS----TRRRLNRKPLADIT--YLFEN 60
           ME +A R HS KENLPP S       P P N   S     + RL RKPLADIT  Y++ N
Sbjct: 1   MEASACRYHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 61  TVQFG------SILVQDRWISSESACSLSNSRKRKAADE-------ICSATAKSLRMGFR 97
              FG      S  +     SS  + S SNSRKRK+  E       + S+ +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSKVNSSNSKSLRMGFR 120

The following BLAST results are available for this feature:

BLAST of Moc04g01020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589263.1	1.3e-23	72.16	hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN47955.1	1.6e-21	67.35	hypothetical protein Csa_002785 [Cucumis sativus]	[more]
OAY33953.1	2.0e-08	42.34	hypothetical protein MANES_13G138400v8 [Manihot esculenta]	[more]
CAB4303764.1	6.5e-07	43.33	unnamed protein product [Prunus armeniaca]	[more]
CAB4273203.1	6.5e-07	43.33	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Moc04g01020 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g01020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE31	7.7e-22	67.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1	[more]
A0A2C9URL6	9.8e-09	42.34	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G138400 PE=4 SV=...	[more]
A0A7N2R9E8	2.8e-08	48.62	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A6J5WXG2	3.2e-07	43.33	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20403 PE=...	[more]
A0A6J5UAF7	3.2e-07	43.33	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20443 PE=4 S...	[more]

BLAST of Moc04g01020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g01020.1	Moc04g01020.1	mRNA