Moc04g00020 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g00020
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DUF4283 domain-containing protein
Location	chr4: 7953 .. 8849 (+)
RNA-Seq Expression	Moc04g00020
Synteny	Moc04g00020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTTTCAAGATGTTGTTTTCATGACAAGTGGAAGCTTATTTCTCAGGCTTTAAAAGATAAATTTTCCCAAAATTGTGTTATCAATCCGTTTATGGTTGATAAAGGCCTTCTGTGTTTTGAAGATAATAGAATGTTGAAATCCTCGGAGTTATCGGGCAAGTGGAGGAAGATTGGGAGCTATCATTTGAAATTAGAAAAATGGAATCCAAAGCTTCATAGTAGAAAAGAATTCGTTTATGGTCATGGAGGATGGATTACTATAAAAGACCTACCTTTGTATTGTTGGAGCCGTGAATGTTTTGAAGCCATTGGGAGTTACTTTGGAGGATTATGGAGTATATCCTCTAAAACGTTGAATATGATTGATGTTTCTAATGCTCAAATCAAAGTTGAACAGAACGAATGCGGGTTTCTTCTTGCATCAGTGGAAATTAAGGATGCCAAGGTTGGATCTTTCATCATTAGTGTTGTGGAAGGGCGAGTTCCAGATAGAACTTCAAGATCGTCACGATTTGTTCTTGATAATCTTCATGGATTATCCAACAAACCGGATGTGGCAAGAATCAAATCTGTTTTGGAAGATGAAAGGTCAGTCTTAAAGAGTGCTGTTATTTATAAAGAAATAGGGGAGACAAAAGGTTGTAATGAAGATCTCGAAATTCCAGTGGACAGTTTGAAGAGTCCTAGCATTAACGATAACTTTCAAACAGCTGGCGCATGCATTGAACCGAATGGCAACGTGCAGGCTCCTAATATTAATGATGCACGGTCTTCCCAGGGGCCCATTAATTACCAAGAATCTCTTAATTCAATATCTGCCTCTTCAGAAAGACGGAAAGGCAGATTTAAAAGTACCCCTCTCCCCTTGGCTGTACGGAAGTCTAAAGGTTAA

mRNA sequence

ATGGTGGTTTCAAGATGTTGTTTTCATGACAAGTGGAAGCTTATTTCTCAGGCTTTAAAAGATAAATTTTCCCAAAATTGTGTTATCAATCCGTTTATGGTTGATAAAGGCCTTCTGTGTTTTGAAGATAATAGAATGTTGAAATCCTCGGAGTTATCGGGCAAGTGGAGGAAGATTGGGAGCTATCATTTGAAATTAGAAAAATGGAATCCAAAGCTTCATAGTAGAAAAGAATTCGTTTATGGTCATGGAGGATGGATTACTATAAAAGACCTACCTTTGTATTGTTGGAGCCGTGAATGTTTTGAAGCCATTGGGAGTTACTTTGGAGGATTATGGAGTATATCCTCTAAAACGTTGAATATGATTGATGTTTCTAATGCTCAAATCAAAGTTGAACAGAACGAATGCGGGTTTCTTCTTGCATCAGTGGAAATTAAGGATGCCAAGGTTGGATCTTTCATCATTAGTGTTGTGGAAGGGCGAGTTCCAGATAGAACTTCAAGATCGTCACGATTTGTTCTTGATAATCTTCATGGATTATCCAACAAACCGGATGTGGCAAGAATCAAATCTGTTTTGGAAGATGAAAGGTCAGTCTTAAAGAGTGCTGTTATTTATAAAGAAATAGGGGAGACAAAAGGTTGTAATGAAGATCTCGAAATTCCAGTGGACAGTTTGAAGAGTCCTAGCATTAACGATAACTTTCAAACAGCTGGCGCATGCATTGAACCGAATGGCAACGTGCAGGCTCCTAATATTAATGATGCACGGTCTTCCCAGGGGCCCATTAATTACCAAGAATCTCTTAATTCAATATCTGCCTCTTCAGAAAGACGGAAAGGCAGATTTAAAAGTACCCCTCTCCCCTTGGCTGTACGGAAGTCTAAAGGTTAA

Coding sequence (CDS)

ATGGTGGTTTCAAGATGTTGTTTTCATGACAAGTGGAAGCTTATTTCTCAGGCTTTAAAAGATAAATTTTCCCAAAATTGTGTTATCAATCCGTTTATGGTTGATAAAGGCCTTCTGTGTTTTGAAGATAATAGAATGTTGAAATCCTCGGAGTTATCGGGCAAGTGGAGGAAGATTGGGAGCTATCATTTGAAATTAGAAAAATGGAATCCAAAGCTTCATAGTAGAAAAGAATTCGTTTATGGTCATGGAGGATGGATTACTATAAAAGACCTACCTTTGTATTGTTGGAGCCGTGAATGTTTTGAAGCCATTGGGAGTTACTTTGGAGGATTATGGAGTATATCCTCTAAAACGTTGAATATGATTGATGTTTCTAATGCTCAAATCAAAGTTGAACAGAACGAATGCGGGTTTCTTCTTGCATCAGTGGAAATTAAGGATGCCAAGGTTGGATCTTTCATCATTAGTGTTGTGGAAGGGCGAGTTCCAGATAGAACTTCAAGATCGTCACGATTTGTTCTTGATAATCTTCATGGATTATCCAACAAACCGGATGTGGCAAGAATCAAATCTGTTTTGGAAGATGAAAGGTCAGTCTTAAAGAGTGCTGTTATTTATAAAGAAATAGGGGAGACAAAAGGTTGTAATGAAGATCTCGAAATTCCAGTGGACAGTTTGAAGAGTCCTAGCATTAACGATAACTTTCAAACAGCTGGCGCATGCATTGAACCGAATGGCAACGTGCAGGCTCCTAATATTAATGATGCACGGTCTTCCCAGGGGCCCATTAATTACCAAGAATCTCTTAATTCAATATCTGCCTCTTCAGAAAGACGGAAAGGCAGATTTAAAAGTACCCCTCTCCCCTTGGCTGTACGGAAGTCTAAAGGTTAA

Protein sequence

MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIGSYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTLNMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVVEGRVPDRTSRSSRFVLDNLHGLSNKPDVARIKSVLEDERSVLKSAVIYKEIGETKGCNEDLEIPVDSLKSPSINDNFQTAGACIEPNGNVQAPNINDARSSQGPINYQESLNSISASSERRKGRFKSTPLPLAVRKSKG

Homology

[Close]

BLAST of Moc04g00020 vs. NCBI nr
Match: XP_038904899.1 (uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida])

HSP 1 Score: 129.8 bits (325), Expect = 3.9e-26
Identity = 56/106 (52.83%), Postives = 80/106 (75.47%), Query Frame = 0


Query: 52  LSGKWRKIGSYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGG 111
           +SGKW+K GS+HLK E+WN  +H R  +V G+GGWI+IK+LPL  W ++ FEAIG YFGG
Sbjct: 220 ISGKWQKFGSFHLKFERWNNSIHGRPAYVRGYGGWISIKNLPLDYWCKQTFEAIGKYFGG 279

Query: 112 LWSISSKTLNMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIIS 158
           L SI+ + LN+I V +A IKV++N CGF+ A++E+ + K GS  ++
Sbjct: 280 LESIAMEILNLIKVLDAIIKVKENLCGFVPATIEVSNEKRGSIYLN 325

[Close]

BLAST of Moc04g00020 vs. NCBI nr
Match: KAA0035766.1 (hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-23
Identity = 52/159 (32.70%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD WK+I  +LK +   +   NPF  +K L+ F +++  KS   + +W  I 
Sbjct: 140 VVITRRLFHDDWKVIMNSLKKQTKTSFTYNPFHAEKALIIFSEHQNAKSLCSNTRWTTIS 199

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            + +K E W+ + H+ ++ +  +GGW++ + +P++ W+ + F  IG+   GL  +   T+
Sbjct: 200 KFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIGNSSEGLLEVEKATM 259

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
           NM ++  A+IKV  N  GF+LA++ IKD  V  F++  V
Sbjct: 260 NMDNLIEAKIKVRYNYSGFILATIRIKDKDVHFFVVHTV 298

[Close]

BLAST of Moc04g00020 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 6.9e-23
Identity = 50/159 (31.45%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD W+ I + L ++        PF  DK L+CF++         +  W  +G
Sbjct: 241 VVLTRRFFHDDWEKIVEKLNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGWTTVG 300

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            +++K E+WN K H+  + +  +GGWI ++ +PL+ W+ E F  IG   GG   ++ +T 
Sbjct: 301 RFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKETR 360

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
            + D+  A I+++ N  GF+ A +++ D +  SFII V+
Sbjct: 361 ELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVI 399

[Close]

BLAST of Moc04g00020 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 6.9e-23
Identity = 50/159 (31.45%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD W+ I + L ++        PF  DK L+CF++         +  W  +G
Sbjct: 293 VVLTRRFFHDDWEKIVEKLNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGWTTVG 352

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            +++K E+WN K H+  + +  +GGWI ++ +PL+ W+ E F  IG   GG   ++ +T 
Sbjct: 353 RFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKETR 412

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
            + D+  A I+++ N  GF+ A +++ D +  SFII V+
Sbjct: 413 ELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVI 451

[Close]

BLAST of Moc04g00020 vs. NCBI nr
Match: ADN33672.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 118.6 bits (296), Expect = 9.0e-23
Identity = 52/159 (32.70%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD W+ I + L ++        PF  +K L+CF+D         +  W  +G
Sbjct: 132 VVLTRRYFHDDWEKIVEKLNEQLDTTVSYKPFHANKALICFKDFEQANLICKNKGWTTVG 191

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            +++K E+WN K H+  +FV  +GGWI ++ +PL+ W+ E F  IG   GG   ++ +T 
Sbjct: 192 RFYVKFEEWNQKDHASPKFVPSYGGWIKVRAVPLHAWNLESFVQIGDACGGFMEVAKETR 251

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
            + D+  A I+V+ N  GF+ A +++ D +  S+II V+
Sbjct: 252 ELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQVI 290

[Close]

BLAST of Moc04g00020 vs. ExPASy TrEMBL
Match: A0A5A7T0M9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00440 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23
Identity = 52/159 (32.70%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD WK+I  +LK +   +   NPF  +K L+ F +++  KS   + +W  I 
Sbjct: 140 VVITRRLFHDDWKVIMNSLKKQTKTSFTYNPFHAEKALIIFSEHQNAKSLCSNTRWTTIS 199

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            + +K E W+ + H+ ++ +  +GGW++ + +P++ W+ + F  IG+   GL  +   T+
Sbjct: 200 KFQVKFEFWSIEKHAGQKLIPSYGGWMSFRGIPIHTWNIDTFLQIGNSSEGLLEVEKATM 259

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
           NM ++  A+IKV  N  GF+LA++ IKD  V  F++  V
Sbjct: 260 NMDNLIEAKIKVRYNYSGFILATIRIKDKDVHFFVVHTV 298

[Close]

BLAST of Moc04g00020 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-23
Identity = 50/159 (31.45%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD W+ I + L ++        PF  DK L+CF++         +  W  +G
Sbjct: 241 VVLTRRFFHDDWEKIVEKLNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGWTTVG 300

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            +++K E+WN K H+  + +  +GGWI ++ +PL+ W+ E F  IG   GG   ++ +T 
Sbjct: 301 RFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKETR 360

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
            + D+  A I+++ N  GF+ A +++ D +  SFII V+
Sbjct: 361 ELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVI 399

[Close]

BLAST of Moc04g00020 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-23
Identity = 50/159 (31.45%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD W+ I + L ++        PF  DK L+CF++         +  W  +G
Sbjct: 293 VVLTRRFFHDDWEKIVEKLNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGWTTVG 352

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            +++K E+WN K H+  + +  +GGWI ++ +PL+ W+ E F  IG   GG   ++ +T 
Sbjct: 353 RFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFTQIGDACGGFIEVAKETR 412

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
            + D+  A I+++ N  GF+ A +++ D +  SFII V+
Sbjct: 413 ELTDIIEASIRIKDNYSGFIPAFIKLFDKEEHSFIIQVI 451

[Close]

BLAST of Moc04g00020 vs. ExPASy TrEMBL
Match: E5GB30 (DUF4283 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.4e-23
Identity = 52/159 (32.70%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD W+ I + L ++        PF  +K L+CF+D         +  W  +G
Sbjct: 132 VVLTRRYFHDDWEKIVEKLNEQLDTTVSYKPFHANKALICFKDFEQANLICKNKGWTTVG 191

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            +++K E+WN K H+  +FV  +GGWI ++ +PL+ W+ E F  IG   GG   ++ +T 
Sbjct: 192 RFYVKFEEWNQKDHASPKFVPSYGGWIKVRAVPLHAWNLESFVQIGDACGGFMEVAKETR 251

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
            + D+  A I+V+ N  GF+ A +++ D +  S+II V+
Sbjct: 252 ELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQVI 290

[Close]

BLAST of Moc04g00020 vs. ExPASy TrEMBL
Match: A0A5A7TLE2 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00570 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-22
Identity = 50/159 (31.45%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 1   MVVSRCCFHDKWKLISQALKDKFSQNCVINPFMVDKGLLCFEDNRMLKSSELSGKWRKIG 60
           +V++R  FHD W+ I + L ++        PF  DK L+CF++         +  W  +G
Sbjct: 139 VVLTRRFFHDDWEKIVEKLNEQLDTTVRYKPFHTDKALICFKNVEQANLICKNKGWTTVG 198

Query: 61  SYHLKLEKWNPKLHSRKEFVYGHGGWITIKDLPLYCWSRECFEAIGSYFGGLWSISSKTL 120
            +++K E+WN K H+  + +  +GGWI ++ +PL+ W+ E F  IG   GG   ++ +T 
Sbjct: 199 RFYVKFEEWNQKAHASPKVIPSYGGWIKVRGVPLHAWNLESFIQIGDACGGFMEVAKETR 258

Query: 121 NMIDVSNAQIKVEQNECGFLLASVEIKDAKVGSFIISVV 160
            + D+  A I+V+ N  GF+ A +++ D +  SFI  V+
Sbjct: 259 ELTDLIEASIRVKDNYSGFIPAFIKLFDKEERSFITQVI 297

The following BLAST results are available for this feature:

BLAST of Moc04g00020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904899.1	3.9e-26	52.83	uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]	[more]
KAA0035766.1	4.1e-23	32.70	hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa]	[more]
KAA0050054.1	6.9e-23	31.45	hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]	[more]
TYK10355.1	6.9e-23	31.45	hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]	[more]
ADN33672.1	9.0e-23	32.70	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of Moc04g00020 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g00020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0M9	2.0e-23	32.70	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7U495	3.3e-23	31.45	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CFS8	3.3e-23	31.45	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
E5GB30	4.4e-23	32.70	DUF4283 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=...	[more]
A0A5A7TLE2	3.7e-22	31.45	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Moc04g00020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 38..132 e-value: 2.8E-11 score: 43.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g00020.1	Moc04g00020.1	mRNA