Moc03g33780 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g33780
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	homeobox protein knotted-1-like 1
Location	chr3: 24077633 .. 24078832 (+)
RNA-Seq Expression	Moc03g33780
Synteny	Moc03g33780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTGATCTGAGCAATTCTACAGAAGGAGAACAAAAAGTGCTACAAGATGAAGAGGAAAAAGAAGGCTGGGAAGGGGAAATTCTGCGGAGGAGAATTTCCAGCCACCCTTTATACGGGCTATTAGTTGAAACTCACCTCAACTGTTTGAAGGTGAGTTTATATTATGGTGCTTTCACTTAATTATGAATAGATGTACGCATTTGTGCAGGCGGCCAACTACACGTGTCTTGTTTCGACTTCCTAAAAAAGGCGTCTTTTAGAAAACAAACCCTTTTCCTTTTTGGTCATTTCTTTGCTAAGCGGTGAGTAATCGGATATACAACGATTTAAACCAATTTCATTGTCGCCTTGATGATTTTATATTTGGTCGACGCCTTCAGACACGATATATGTATGTACAAGTTTTTTATATGTTATGTTCAGGTTGGAGGAATAGGTGACATGGACAGAGGTTATTTAGCTACGGATGTGATCAAACAGCAAGATAACAATATCAGATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGCTTCATGGTATAAACCTCCATCATACTAATTATATATATAATGACATGCATATTTATCACGCGCATGTATGGAGGACAAAAAGAGTACCGTTATACACACATGGGCGCACGTGCGAATTCTATTGAGCTTATATATATAGAAGCCTTGCTCAAGTATGGCGGAATCATGAGAAACAATTTGCAACTACAATATACATGCATTCAGTAACATCTTTATTTAGTAAAATTAGCTGAAATTTTGAAATTCTTGAGCTGGTGGGTGAATTGAACTATAAGAAATGCAGCTTTATATGAATGTCTTTTAATTTATAGTTACATTTTAATAATTAAATCGAGAATTTTTATTTGGCGTCAAGTGTGTTGAGTCATGAGTGGCCAAAAATTTAGGAAGTGGAAAAAGAAATGTTCGATCTCTGTTTTATTCTCTTCTTGGCTCTTTTCTCCCTGGGTTTTGGGACAATATATTTTTCAGATCAAACTAGACGAGTATATGCAGGAAACCTATTGTTTTGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGATAAAATCTATGGCATTTATCAACAGCATGCACTCGCAGTTAAGGGAGATCCCAGCCACCAGTGCGGCAGCCCACAAACCCACCACCTCATCTTCCAGTGACACAAACTGA

mRNA sequence

ATGGAGTCTGATCTGAGCAATTCTACAGAAGGAGAACAAAAAGTGCTACAAGATGAAGAGGAAAAAGAAGGCTGGGAAGGGGAAATTCTGCGGAGGAGAATTTCCAGCCACCCTTTATACGGGCTATTAGTTGAAACTCACCTCAACTGTTTGAAGGTTGGAGGAATAGGTGACATGGACAGAGGTTATTTAGCTACGGATGTGATCAAACAGCAAGATAACAATATCAGATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGCTTCATGATCAAACTAGACGAGTATATGCAGGAAACCTATTGTTTTGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGATAAAATCTATGGCATTTATCAACAGCATGCACTCGCAGTTAAGGGAGATCCCAGCCACCAGTGCGGCAGCCCACAAACCCACCACCTCATCTTCCAGTGACACAAACTGA

Coding sequence (CDS)

ATGGAGTCTGATCTGAGCAATTCTACAGAAGGAGAACAAAAAGTGCTACAAGATGAAGAGGAAAAAGAAGGCTGGGAAGGGGAAATTCTGCGGAGGAGAATTTCCAGCCACCCTTTATACGGGCTATTAGTTGAAACTCACCTCAACTGTTTGAAGGTTGGAGGAATAGGTGACATGGACAGAGGTTATTTAGCTACGGATGTGATCAAACAGCAAGATAACAATATCAGATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGCTTCATGATCAAACTAGACGAGTATATGCAGGAAACCTATTGTTTTGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGATAAAATCTATGGCATTTATCAACAGCATGCACTCGCAGTTAAGGGAGATCCCAGCCACCAGTGCGGCAGCCCACAAACCCACCACCTCATCTTCCAGTGACACAAACTGA

Protein sequence

MESDLSNSTEGEQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQDNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQLREIPATSAAAHKPTTSSSSDTN

Homology

[Close]

BLAST of Moc03g33780 vs. NCBI nr
Match: XP_022137557.1 (protein KNATM [Momordica charantia])

HSP 1 Score: 274.6 bits (701), Expect = 5.1e-70
Identity = 145/153 (94.77%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MESDLSNSTEGEQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMD 60
           MESDLSNSTEGEQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMD
Sbjct: 1   MESDLSNSTEGEQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMD 60

Query: 61  RGYLATDVIKQQDNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKS 120
           RGYLATDVIKQQDNNIRCLNTLNQSELDRFM        ETYCFALSKLKEAMEESQIKS
Sbjct: 61  RGYLATDVIKQQDNNIRCLNTLNQSELDRFM--------ETYCFALSKLKEAMEESQIKS 120

Query: 121 MAFINSMHSQLREIPATSAAAHKPTTSSSSDTN 154
           MAFINSMHSQLREIPATSAAAHKPTTSSSSDTN
Sbjct: 121 MAFINSMHSQLREIPATSAAAHKPTTSSSSDTN 145

[Close]

BLAST of Moc03g33780 vs. NCBI nr
Match: KAG7028461.1 (Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.2 bits (487), Expect = 3.3e-45
Identity = 100/138 (72.46%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 13  QKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQ 72
           Q  L+ EEE +G +GE+LRRRISSHPLYGLL+ETHLNCLKVGGIG++DRGYLA D+++ +
Sbjct: 15  QLQLKHEEEDDGVDGEMLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHR 74

Query: 73  DNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQLR 132
           +N IRCLNTLNQSELDRFM        E+YC+ALSKLKEAMEESQ+KSMAFINSM+SQLR
Sbjct: 75  ENEIRCLNTLNQSELDRFM--------ESYCYALSKLKEAMEESQLKSMAFINSMNSQLR 134

Query: 133 EIPATSAAAHKPTTSSSS 151
           E+ AT AAA KPT +SSS
Sbjct: 135 ELTATGAAAKKPTAASSS 144

[Close]

BLAST of Moc03g33780 vs. NCBI nr
Match: KAG6596993.1 (Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44
Identity = 99/138 (71.74%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 13  QKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQ 72
           Q  L+ EEE +G +G+ LRRRISSHPLYGLL+ETHLNCLKVGGIG++DRGYLA D+++ +
Sbjct: 15  QLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHR 74

Query: 73  DNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQLR 132
           +N IRCLNTLNQSELDRFM        E+YC+ALSKLKEAMEESQ+KSMAFINSM+SQLR
Sbjct: 75  ENEIRCLNTLNQSELDRFM--------ESYCYALSKLKEAMEESQLKSMAFINSMNSQLR 134

Query: 133 EIPATSAAAHKPTTSSSS 151
           E+ AT AAA KPT +SSS
Sbjct: 135 ELTATGAAAKKPTAASSS 144

[Close]

BLAST of Moc03g33780 vs. NCBI nr
Match: XP_022945492.1 (homeobox protein KNOX3 [Cucurbita moschata])

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44
Identity = 99/138 (71.74%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 13  QKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQ 72
           Q  L+ EEE +G +G+ LRRRISSHPLYGLL+ETHLNCLKVGGIG++DRGYLA D+++ +
Sbjct: 15  QLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHR 74

Query: 73  DNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQLR 132
           +N IRCLNTLNQSELDRFM        E+YC+ALSKLKEAMEESQ+KSMAFINSM+SQLR
Sbjct: 75  ENEIRCLNTLNQSELDRFM--------ESYCYALSKLKEAMEESQLKSMAFINSMNSQLR 134

Query: 133 EIPATSAAAHKPTTSSSS 151
           E+ AT AAA KPT +SSS
Sbjct: 135 ELTATGAAAKKPTAASSS 144

[Close]

BLAST of Moc03g33780 vs. NCBI nr
Match: XP_023539616.1 (homeobox protein KNOX3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.7 bits (478), Expect = 3.6e-44
Identity = 98/138 (71.01%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 13  QKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQ 72
           Q  L+ EEE +G +G++LR RISSHPLYGLL+ETHLNCLKVGGIG++DRGYLA D+++ +
Sbjct: 15  QLQLKHEEEDDGVDGDMLRTRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHR 74

Query: 73  DNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQLR 132
           +N IRCLNTLNQSELDRFM        E+YC+ALSKLKEAMEESQ+KSMAFINSM+SQLR
Sbjct: 75  ENEIRCLNTLNQSELDRFM--------ESYCYALSKLKEAMEESQLKSMAFINSMNSQLR 134

Query: 133 EIPATSAAAHKPTTSSSS 151
           E+ AT AAA KPT +SSS
Sbjct: 135 ELTATGAAAKKPTAASSS 144

[Close]

BLAST of Moc03g33780 vs. ExPASy Swiss-Prot
Match: F4HXU3 (Protein KNATM OS=Arabidopsis thaliana OX=3702 GN=KNATM PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 12 EQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYL---ATDV 71
          +Q++    +E+   E EIL++RISSHPLYGLL+ +HLNCLKV   GD D   +   A D+
Sbjct: 15 KQEINHSLKEEAQEEEEILKKRISSHPLYGLLLHSHLNCLKVCS-GDFDSPEIMNTADDL 74

Query: 72 -IKQQDNNIRCLNTLNQSELDRFMI 93
           + +   +    +    SELD+FM+
Sbjct: 75 ALSKLSLHPDSSSEATSSELDQFMV 98

[Close]

BLAST of Moc03g33780 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-04
Identity = 37/126 (29.37%), Postives = 66/126 (52.38%), Query Frame = 0


Query: 29  ILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQDNNIRCLNTLNQSELD 88
           +++ +I+SHPLY  L++T+++C KVG    M+   +  ++ ++     R +  L+    D
Sbjct: 68  VIKSKIASHPLYPRLLQTYIDCQKVG--APMEIACILEEIQRENHVYKRDVAPLSCFGAD 127

Query: 89  RFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQLREI---PATSAAAHKPT 148
               +LDE+M ETYC  L K K  +     ++  FIN +  QL+ +   PA++ A     
Sbjct: 128 P---ELDEFM-ETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSDDG 187

Query: 149 TSSSSD 152
             SS +
Sbjct: 188 AVSSDE 187

[Close]

BLAST of Moc03g33780 vs. ExPASy TrEMBL
Match: A0A6J1C8K6 (protein KNATM OS=Momordica charantia OX=3673 GN=LOC111008979 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 145/153 (94.77%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MESDLSNSTEGEQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMD 60
           MESDLSNSTEGEQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMD
Sbjct: 1   MESDLSNSTEGEQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMD 60

Query: 61  RGYLATDVIKQQDNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKS 120
           RGYLATDVIKQQDNNIRCLNTLNQSELDRFM        ETYCFALSKLKEAMEESQIKS
Sbjct: 61  RGYLATDVIKQQDNNIRCLNTLNQSELDRFM--------ETYCFALSKLKEAMEESQIKS 120

Query: 121 MAFINSMHSQLREIPATSAAAHKPTTSSSSDTN 154
           MAFINSMHSQLREIPATSAAAHKPTTSSSSDTN
Sbjct: 121 MAFINSMHSQLREIPATSAAAHKPTTSSSSDTN 145

[Close]

BLAST of Moc03g33780 vs. ExPASy TrEMBL
Match: A0A6J1G133 (homeobox protein KNOX3 OS=Cucurbita moschata OX=3662 GN=LOC111449708 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.1e-45
Identity = 99/138 (71.74%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 13  QKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQ 72
           Q  L+ EEE +G +G+ LRRRISSHPLYGLL+ETHLNCLKVGGIG++DRGYLA D+++ +
Sbjct: 15  QLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHR 74

Query: 73  DNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQLR 132
           +N IRCLNTLNQSELDRFM        E+YC+ALSKLKEAMEESQ+KSMAFINSM+SQLR
Sbjct: 75  ENEIRCLNTLNQSELDRFM--------ESYCYALSKLKEAMEESQLKSMAFINSMNSQLR 134

Query: 133 EIPATSAAAHKPTTSSSS 151
           E+ AT AAA KPT +SSS
Sbjct: 135 ELTATGAAAKKPTAASSS 144

[Close]

BLAST of Moc03g33780 vs. ExPASy TrEMBL
Match: A0A6J1IFV6 (homeobox protein KNOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111472956 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.7e-44
Identity = 100/148 (67.57%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 4   DLSNSTEGEQKVLQDEEEKEGWE-GEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRG 63
           D  N +  +   L+ EEE +G + GE+LRRRISSHPLYGLL++THLNCLKVGGIG++DRG
Sbjct: 2   DSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRG 61

Query: 64  YLATDVIKQQDNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMA 123
           YLA D+++ ++N IRCLNTLNQSELDRFM        E+YC+ALSKLKEAMEESQ+KSMA
Sbjct: 62  YLAMDLMEHRENEIRCLNTLNQSELDRFM--------ESYCYALSKLKEAMEESQLKSMA 121

Query: 124 FINSMHSQLREIPATSAAAHKPTTSSSS 151
           FINSM+SQLRE+ AT AAA KPT +SSS
Sbjct: 122 FINSMNSQLRELTATGAAAKKPTAASSS 141

[Close]

BLAST of Moc03g33780 vs. ExPASy TrEMBL
Match: V7C3D2 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G148100g PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24
Identity = 79/154 (51.30%), Postives = 97/154 (62.99%), Query Frame = 0


Query: 1   MESDLSNSTEGEQKVLQ---DEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIG 60
           MES+  N+T    K LQ   D++E+E    EIL+RRISSHPLYGLLVE HL+CLKVG I 
Sbjct: 1   MESERPNTTIETYKELQQQEDDDEEEEKNNEILKRRISSHPLYGLLVEAHLDCLKVGDIS 60

Query: 61  DMDRGYLATDVIKQQDNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQ 120
           +++R     ++   +  N   L   +QSELD FM        E YC AL KLKEAM E Q
Sbjct: 61  NLERELKIDEMQAAEKQN---LGMFSQSELDLFM--------EAYCMALGKLKEAMVEPQ 120

Query: 121 IKSMAFINSMHSQLREIPATSAAAHKPTTSSSSD 152
            KSMAFIN+MHSQLREI   +  A    T+SSS+
Sbjct: 121 QKSMAFINNMHSQLREITKPTLPAPPSDTASSSE 143

[Close]

BLAST of Moc03g33780 vs. ExPASy TrEMBL
Match: A0A1S3TM14 (homeobox protein knotted-1-like 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756745 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.8e-23
Identity = 80/162 (49.38%), Postives = 99/162 (61.11%), Query Frame = 0


Query: 1   MESDLSNST--------EGEQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLK 60
           MES+  N+T        + +Q+   +EEE+E    EIL+RRISSHPLYGLLVE HL+CLK
Sbjct: 1   MESERPNTTIETYEHQHQLQQQDDDEEEEEEEKNNEILKRRISSHPLYGLLVEAHLDCLK 60

Query: 61  VGGIGDMDRGYLATDVIKQQDNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEA 120
           VG I +++R      + + Q    + L   +QSELD FM        E YC AL KLKEA
Sbjct: 61  VGDISNLER---ELKIDQMQATEKKNLGMFSQSELDLFM--------EAYCLALGKLKEA 120

Query: 121 MEESQIKSMAFINSMHSQLREI-----PATSAAAHKPTTSSS 150
           M E Q KSMAFIN+MHSQLREI     PA S+    P+ SSS
Sbjct: 121 MVEPQQKSMAFINNMHSQLREITNPTLPAPSSEPSPPSASSS 151

[Close]

BLAST of Moc03g33780 vs. TAIR 10
Match: AT1G14760.2 (KNOX Arabidopsis thaliana meinox )

HSP 1 Score: 74.3 bits (181), Expect = 9.3e-14
Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 0


Query: 12  EQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQ 71
           +Q++    +E+   E EIL++RISSHPLYGLL+ +HLNCLKV   GD D   +       
Sbjct: 15  KQEINHSLKEEAQEEEEILKKRISSHPLYGLLLHSHLNCLKVCS-GDFDSPEIMNTA--- 74

Query: 72  QDNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQL 131
            D  +  L+    S  +    +LD++M E YC  L +LKEAME+   ++  F++++++QL
Sbjct: 75  DDLALSKLSLHPDSSSEATSSELDQFM-EAYCSTLRELKEAMEKPLTETHRFVDAVYTQL 134

Query: 132 REIPATS 139
            +I  +S
Sbjct: 135 NDIVMSS 136

[Close]

BLAST of Moc03g33780 vs. TAIR 10
Match: AT1G14760.3 (KNOX Arabidopsis thaliana meinox )

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08
Identity = 38/127 (29.92%), Postives = 59/127 (46.46%), Query Frame = 0


Query: 12  EQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQ 71
           +Q++    +E+   E EIL++RISSHPLYGLL+ +HLNCLK                   
Sbjct: 15  KQEINHSLKEEAQEEEEILKKRISSHPLYGLLLHSHLNCLK------------------- 74

Query: 72  QDNNIRCLNTLNQSELDRFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQL 131
                                       E YC  L +LKEAME+   ++  F++++++QL
Sbjct: 75  ----------------------------EAYCSTLRELKEAMEKPLTETHRFVDAVYTQL 94

Query: 132 REIPATS 139
            +I  +S
Sbjct: 135 NDIVMSS 94

[Close]

BLAST of Moc03g33780 vs. TAIR 10
Match: AT1G14760.1 (KNOX Arabidopsis thaliana meinox )

HSP 1 Score: 54.7 bits (130), Expect = 7.7e-08
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 12 EQKVLQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYL---ATDV 71
          +Q++    +E+   E EIL++RISSHPLYGLL+ +HLNCLKV   GD D   +   A D+
Sbjct: 15 KQEINHSLKEEAQEEEEILKKRISSHPLYGLLLHSHLNCLKVCS-GDFDSPEIMNTADDL 74

Query: 72 -IKQQDNNIRCLNTLNQSELDRFMI 93
           + +   +    +    SELD+FM+
Sbjct: 75 ALSKLSLHPDSSSEATSSELDQFMV 98

[Close]

BLAST of Moc03g33780 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05
Identity = 37/126 (29.37%), Postives = 66/126 (52.38%), Query Frame = 0


Query: 29  ILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQDNNIRCLNTLNQSELD 88
           +++ +I+SHPLY  L++T+++C KVG    M+   +  ++ ++     R +  L+    D
Sbjct: 68  VIKSKIASHPLYPRLLQTYIDCQKVG--APMEIACILEEIQRENHVYKRDVAPLSCFGAD 127

Query: 89  RFMIKLDEYMQETYCFALSKLKEAMEESQIKSMAFINSMHSQLREI---PATSAAAHKPT 148
               +LDE+M ETYC  L K K  +     ++  FIN +  QL+ +   PA++ A     
Sbjct: 128 P---ELDEFM-ETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSDDG 187

Query: 149 TSSSSD 152
             SS +
Sbjct: 188 AVSSDE 187

The following BLAST results are available for this feature:

BLAST of Moc03g33780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137557.1	5.1e-70	94.77	protein KNATM [Momordica charantia]	[more]
KAG7028461.1	3.3e-45	72.46	Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596993.1	1.3e-44	71.74	Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945492.1	1.3e-44	71.74	homeobox protein KNOX3 [Cucurbita moschata]	[more]
XP_023539616.1	3.6e-44	71.01	homeobox protein KNOX3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc03g33780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HXU3	1.1e-06	41.18	Protein KNATM OS=Arabidopsis thaliana OX=3702 GN=KNATM PE=1 SV=1	[more]
P46640	2.2e-04	29.37	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]

BLAST of Moc03g33780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8K6	2.4e-70	94.77	protein KNATM OS=Momordica charantia OX=3673 GN=LOC111008979 PE=4 SV=1	[more]
A0A6J1G133	6.1e-45	71.74	homeobox protein KNOX3 OS=Cucurbita moschata OX=3662 GN=LOC111449708 PE=4 SV=1	[more]
A0A6J1IFV6	6.7e-44	67.57	homeobox protein KNOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111472956 PE=4 SV=...	[more]
V7C3D2	3.5e-24	51.30	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G148100g PE=4 ...	[more]
A0A1S3TM14	3.8e-23	49.38	homeobox protein knotted-1-like 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC10...	[more]

BLAST of Moc03g33780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14760.2	9.3e-14	37.80	KNOX Arabidopsis thaliana meinox	[more]
AT1G14760.3	5.9e-08	29.92	KNOX Arabidopsis thaliana meinox	[more]
AT1G14760.1	7.7e-08	41.18	KNOX Arabidopsis thaliana meinox	[more]
AT1G70510.1	1.6e-05	29.37	KNOTTED-like from Arabidopsis thaliana 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 28..74 e-value: 7.5E-8 score: 42.1
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 31..55 e-value: 6.1E-7 score: 29.1
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 77..136 e-value: 0.0056 score: 23.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 17..132
None	No IPR available	PANTHER	PTHR11850:SF290	FUSED COMPOUND LEAF 1	coord: 17..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g33780.1	Moc03g33780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding