Moc03g29640 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g29640
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein ROOT INITIATION DEFECTIVE 3-like isoform X1
Location	chr3: 21171298 .. 21174139 (+)
RNA-Seq Expression	Moc03g29640
Synteny	Moc03g29640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAGTTTTGCTGCTTCCAGTTTCCTCTCTCAGAACCTCGGGAGATGGGTAATGGAGGCGAAAGAGAAGCATTGGCTGTGTGCAGCGATAAGAACATGGGATCGGGGATCACTATTTGGGATGTGGAAACAGGCGATACTCTCCTTCATATTCCGACTTGCGCTTCGCCTCCTTATGGTTTGATTTGCTTGAGAAATGAGTTTCTTGTTGCTTCTCAGACTCGTAAGGAAGGGTCCGTTGGCGGTGGATCCATCTTCATTTGGTCCCTCAACAAGGTATTGATTAATCAATTAGAATCCAGCCGATTCTTTGAATAGACATTTTTTGTTACTTGCAAACTTTAGGTCTCCAATGTCCCATTATTTGTGGTCAAATCTTATTCTGCTTTCAGTTGTTTGAGTGATCATGGACGGTTTACTATATTTTTGAACTTGAGGAGTATTTTTGTTGTTATAGTCCTGAGTTCCTGAGTTCAAACTCTGTTAAATCCTCCTAATTAATATTGATAATCCACTTGTTAATTTCCGAATTGCCTCTTAGGAGATTAGCAGGGGTGATTTAACAGTATTTGGCCTAATCATTGTGATTTTCAGCCTCAACCTCCTCTTAGGAGCTATCCATTGGAGCCCATTGGACCACTTGCCTCGACAAAGGACGGAGTATATCTTGCAGGTGGAGCTCTTTCAGGAAATATTCATCTCTGGGAGGTTAGTAATTAGCCGACATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATCCAGAATTCATGAATGCTCATGTATGTGGATATGTATTATGTGCATATACTTCATTTAGAGGTTAAATTTTCCCATTCCCCAATTTTCACCTCGAATCTATTTGGTTGAGGCAACTTGTAGGTGGGTAGTGGTAAATTGCTCAAGCTTTGGAGTGGTCATCGTAAACCCATAAAATGCATCCTGTTTTCTTGGGACGATTCGTTTCTCATTACCGGTTCAGCAGACGGAATGATTTGCGTCTGGTCCATGATTTGGTAAATGTATTCCCTTCACAATGCCACTGCAAATTCTTTTATTAAATCATTGCTTTTCATGGTCAAGATTTTCCTTTTAAATTTTGCAATAAGTTTGCTGGATGTGGAACATGAGAGAAGCTCACAGCCAATCTTGTATTGCCTCATGGAACATAAGTCATCTTTAACTGGTCTACTTGCTATGTCTGTCTGCACGTCAATAATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGGTTGCTAAACAGTAACATTCTATCTATAATTCCAACTGTTGATCTATAATAAAATTTATTAACATTTTCTGGGTTGCAGTTTTGGGATCTGATTTCGGGAATGATTATGGGATCTCAAGCTCATACTGAAGGGATCACTGCTATTGTTCTTCATCCAACTGAGCAACTATTGTTCTCTGGGAGCGTGGATGGGCAAATTTTTGCTAGCAAGCTTGAATTTGGAGTAGATAACTGCATTGCCATGAAAGATAACCAATTACTTGCTCCAAAAGGACACAAGTAATATATGGTACTTGAAATTTATGGGTGTTGATTGTAGTATGACTTTCCTTTTCTGCTGTTATCTTTGGAACTCCTACTATTGTCTTTCTATTTTCTTTAATTACTATCCGAGCAAAGAGAATGCTTTTTCCTTCAAACTATCTTAGCTTTGACAGAAGATTAACATAGTATTGGCTGCTTTGCAACTTAGTGTTTTCGTTCCTTTAACCAACAATTGATTGCAAGTCCATTAGTTATGCCTTTCCTTTATACACTTCAATAGAAAGTTCATGTTTAAGTTTCGCCAATGCAGAGGAGCTATTACTGCTCTGGCCTTCAGTCGGATGGATCTAATTTCCACATCTGAGGACTGCACTGTTTGCATATGGGACATCAGCAGTCAGAGGATCATACAAAAGCTTGACCACAAGAAAGGTAATAACTTGATCTGCTTTGCCAGTAGGTAGTTTAAAGTTGTCATTCTCCTTTAGTTATGCCTTTTCTTTTTTGTTGAACATGAACTTCCTGCCTTTTTGTAAATGGCATCTGACTTGCCAACCTTTTGGCTTTTGAAGATAAAAACGTTCTTGGGTTATATCTGTAATTCTGGAAACTGGAACTCAACTGAGATTGCATATACAGAACCTTTTCTTTTCAGAAGGTCAATTTGGGATCTTTGAATATGCATTGGATTACTGTTTTTTGTTCATTAACAGGGAGAATAACCAACTTGGTAGCAATTCCATGGCCATCCCTGATCTCAATGTCAAACCGTAAGAGAGCCTTGAATCATTTCTCCGTGTCATCACTCGACAAGTATCCTCAGCCAGCCAACTTGTTGAATAGCACGATACCTCTCTTTCCCCCGCTCCATCCCCTCGAGGAAAATTGGAATTCCATCAGGTTCTCAAGTAACGACTCACTGAATCAGCAAATATTTGATATGAAGGTCACTCTTTCTTTCAATGTGGGCTTGATATAGCTAGTTGGGTCACGTGAACAAAATGCAGCCTATATTATCATACTACCATTCTGAATTCTCCTCTTCCATTGTGTTCAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTAGAAACAAGTTTAGAAAGTCAAATGTGGGCTTCCAGAATTACAAAGCAAGTGATGGAGATGAACAACCATCTTCAATCGCGGTTGCTAGACATGATGAGGATTCGATTATTCAAGTCTGCAAAAGTTAACTCACCTACAAAGAAACTGAAAGGCAAAAGAGATCGAGTTGCAGGGATGAGGGAGAAGCAGCCATCGTCGTTTCATTAA

mRNA sequence

ATGGGGGAGTTTTGCTGCTTCCAGTTTCCTCTCTCAGAACCTCGGGAGATGGGTAATGGAGGCGAAAGAGAAGCATTGGCTGTGTGCAGCGATAAGAACATGGGATCGGGGATCACTATTTGGGATGTGGAAACAGGCGATACTCTCCTTCATATTCCGACTTGCGCTTCGCCTCCTTATGGTTTGATTTGCTTGAGAAATGAGTTTCTTGTTGCTTCTCAGACTCGTAAGGAAGGGTCCGTTGGCGGTGGATCCATCTTCATTTGGTCCCTCAACAAGCCTCAACCTCCTCTTAGGAGCTATCCATTGGAGCCCATTGGACCACTTGCCTCGACAAAGGACGGAGTATATCTTGCAGGTGGAGCTCTTTCAGGAAATATTCATCTCTGGGAGGTGGGTAGTGGTAAATTGCTCAAGCTTTGGAGTGGTCATCGTAAACCCATAAAATGCATCCTGTTTTCTTGGGACGATTCGTTTCTCATTACCGGTTCAGCAGACGGAATGATTTGCGTCTGGTCCATGATTTGTTTGCTGGATGTGGAACATGAGAGAAGCTCACAGCCAATCTTGTATTGCCTCATGGAACATAAGTCATCTTTAACTGGTCTACTTGCTATGTCTGTCTGCACGTCAATAATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGTTTTGGGATCTGATTTCGGGAATGATTATGGGATCTCAAGCTCATACTGAAGGGATCACTGCTATTGTTCTTCATCCAACTGAGCAACTATTGTTCTCTGGGAGCGTGGATGGGCAAATTTTTGCTAGCAAGCTTGAATTTGGAGTAGATAACTGCATTGCCATGAAAGATAACCAATTACTTGCTCCAAAAGGACACAAAGGAGCTATTACTGCTCTGGCCTTCAGTCGGATGGATCTAATTTCCACATCTGAGGACTGCACTGTTTGCATATGGGACATCAGCAGTCAGAGGATCATACAAAAGCTTGACCACAAGAAAGGGAGAATAACCAACTTGGTAGCAATTCCATGGCCATCCCTGATCTCAATGTCAAACCGTAAGAGAGCCTTGAATCATTTCTCCGTGTCATCACTCGACAAGTATCCTCAGCCAGCCAACTTGTTGAATAGCACGATACCTCTCTTTCCCCCGCTCCATCCCCTCGAGGAAAATTGGAATTCCATCAGGTTCTCAAGTAACGACTCACTGAATCAGCAAATATTTGATATGAAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTAGAAACAAGTTTAGAAAGTCAAATGTGGGCTTCCAGAATTACAAAGCAAGTGATGGAGATGAACAACCATCTTCAATCGCGGTTGCTAGACATGATGAGGATTCGATTATTCAAGTCTGCAAAAGTTAACTCACCTACAAAGAAACTGAAAGGCAAAAGAGATCGAGTTGCAGGGATGAGGGAGAAGCAGCCATCGTCGTTTCATTAA

Coding sequence (CDS)

ATGGGGGAGTTTTGCTGCTTCCAGTTTCCTCTCTCAGAACCTCGGGAGATGGGTAATGGAGGCGAAAGAGAAGCATTGGCTGTGTGCAGCGATAAGAACATGGGATCGGGGATCACTATTTGGGATGTGGAAACAGGCGATACTCTCCTTCATATTCCGACTTGCGCTTCGCCTCCTTATGGTTTGATTTGCTTGAGAAATGAGTTTCTTGTTGCTTCTCAGACTCGTAAGGAAGGGTCCGTTGGCGGTGGATCCATCTTCATTTGGTCCCTCAACAAGCCTCAACCTCCTCTTAGGAGCTATCCATTGGAGCCCATTGGACCACTTGCCTCGACAAAGGACGGAGTATATCTTGCAGGTGGAGCTCTTTCAGGAAATATTCATCTCTGGGAGGTGGGTAGTGGTAAATTGCTCAAGCTTTGGAGTGGTCATCGTAAACCCATAAAATGCATCCTGTTTTCTTGGGACGATTCGTTTCTCATTACCGGTTCAGCAGACGGAATGATTTGCGTCTGGTCCATGATTTGTTTGCTGGATGTGGAACATGAGAGAAGCTCACAGCCAATCTTGTATTGCCTCATGGAACATAAGTCATCTTTAACTGGTCTACTTGCTATGTCTGTCTGCACGTCAATAATCATTTCAAGCTCCCTCGATGGCAGTTTAAAGTTTTGGGATCTGATTTCGGGAATGATTATGGGATCTCAAGCTCATACTGAAGGGATCACTGCTATTGTTCTTCATCCAACTGAGCAACTATTGTTCTCTGGGAGCGTGGATGGGCAAATTTTTGCTAGCAAGCTTGAATTTGGAGTAGATAACTGCATTGCCATGAAAGATAACCAATTACTTGCTCCAAAAGGACACAAAGGAGCTATTACTGCTCTGGCCTTCAGTCGGATGGATCTAATTTCCACATCTGAGGACTGCACTGTTTGCATATGGGACATCAGCAGTCAGAGGATCATACAAAAGCTTGACCACAAGAAAGGGAGAATAACCAACTTGGTAGCAATTCCATGGCCATCCCTGATCTCAATGTCAAACCGTAAGAGAGCCTTGAATCATTTCTCCGTGTCATCACTCGACAAGTATCCTCAGCCAGCCAACTTGTTGAATAGCACGATACCTCTCTTTCCCCCGCTCCATCCCCTCGAGGAAAATTGGAATTCCATCAGGTTCTCAAGTAACGACTCACTGAATCAGCAAATATTTGATATGAAGACAGAAGGGACATCAGCAGCAATACAGATGAAAGTAGAAACAAGTTTAGAAAGTCAAATGTGGGCTTCCAGAATTACAAAGCAAGTGATGGAGATGAACAACCATCTTCAATCGCGGTTGCTAGACATGATGAGGATTCGATTATTCAAGTCTGCAAAAGTTAACTCACCTACAAAGAAACTGAAAGGCAAAAGAGATCGAGTTGCAGGGATGAGGGAGAAGCAGCCATCGTCGTTTCATTAA

Protein sequence

MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH

Homology

[Close]

BLAST of Moc03g29640 vs. NCBI nr
Match: XP_022137407.1 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Momordica charantia])

HSP 1 Score: 990.3 bits (2559), Expect = 5.8e-285
Identity = 488/488 (100.00%), Postives = 488/488 (100.00%), Query Frame = 0


Query: 1   MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY 60
           MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY
Sbjct: 1   MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY 60

Query: 61  GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG 120
           GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG
Sbjct: 61  GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG 120

Query: 121 GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV 180
           GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV
Sbjct: 121 GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV 180

Query: 181 EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE 240
           EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE
Sbjct: 181 EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE 240

Query: 241 GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR 300
           GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR
Sbjct: 241 GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR 300

Query: 301 MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS 360
           MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS
Sbjct: 301 MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS 360

Query: 361 SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKV 420
           SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKV
Sbjct: 361 SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKV 420

Query: 421 ETSLESQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMR 480
           ETSLESQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMR
Sbjct: 421 ETSLESQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMR 480

Query: 481 EKQPSSFH 489
           EKQPSSFH
Sbjct: 481 EKQPSSFH 488

[Close]

BLAST of Moc03g29640 vs. NCBI nr
Match: XP_022137408.1 (protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Momordica charantia])

HSP 1 Score: 814.7 bits (2103), Expect = 4.3e-232
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 1   MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY 60
           MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY
Sbjct: 1   MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY 60

Query: 61  GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG 120
           GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG
Sbjct: 61  GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG 120

Query: 121 GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV 180
           GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV
Sbjct: 121 GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV 180

Query: 181 EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE 240
           EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE
Sbjct: 181 EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE 240

Query: 241 GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR 300
           GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR
Sbjct: 241 GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR 300

Query: 301 MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS 360
           MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS
Sbjct: 301 MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS 360

Query: 361 SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIR 394
           SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIR
Sbjct: 361 SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIR 393

[Close]

BLAST of Moc03g29640 vs. NCBI nr
Match: XP_016899511.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 783.5 bits (2022), Expect = 1.1e-222
Identity = 390/483 (80.75%), Postives = 426/483 (88.20%), Query Frame = 0


Query: 7   FQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLR 66
           F F L E ++MGNGGE  ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLR
Sbjct: 8   FCFHLFEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLR 67

Query: 67  NEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGN 126
           NEF VASQTRKEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG  SGN
Sbjct: 68  NEFFVASQTRKEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGN 127

Query: 127 IHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSS 186
           IHLWEVGSGKLLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE   +S
Sbjct: 128 IHLWEVGSGKLLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENS 187

Query: 187 QPILYCLMEHKSSLTGLLAMSVCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAI 246
           QP++YCLM+HKSSLTGLL MS C+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAI
Sbjct: 188 QPLVYCLMQHKSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAI 247

Query: 247 VLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLIS 306
           VLHPTEQ+LFSG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS
Sbjct: 248 VLHPTEQVLFSGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLIS 307

Query: 307 TSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKY 366
            SEDCTVCIWDIS QRIIQKLDHKKGRITNLVAIP  SLIS SNRKR LN FS+SSLDKY
Sbjct: 308 ASEDCTVCIWDISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKY 367

Query: 367 PQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLE 426
           PQPANL+ STIPLF  L PL+EN NSI F+S  SLNQQI DMKTEGTSAAIQMKVETSLE
Sbjct: 368 PQPANLMKSTIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLE 427

Query: 427 SQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPS 486
            +MWASR+TKQVM+MNNHLQSR+LDMMRIRLF+  K+NS +KK K +RDRVA   EK PS
Sbjct: 428 RRMWASRMTKQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPS 487

Query: 487 SFH 489
           SFH
Sbjct: 488 SFH 490

[Close]

BLAST of Moc03g29640 vs. NCBI nr
Match: XP_038894085.1 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 778.9 bits (2010), Expect = 2.6e-221
Identity = 388/473 (82.03%), Postives = 422/473 (89.22%), Query Frame = 0


Query: 17  MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 76
           MG  GE+  LA+CSD+NMGSGITIWDV+TG TLLHIPTCASPPYGLICLRNEFLVASQTR
Sbjct: 1   MGYDGEKMVLAMCSDRNMGSGITIWDVKTGQTLLHIPTCASPPYGLICLRNEFLVASQTR 60

Query: 77  KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 136
           KEGSVGGGSIFIWSLNKPQPP+ SY LEPIGPLASTKD VYLAGG  SGNIHLWEVGSGK
Sbjct: 61  KEGSVGGGSIFIWSLNKPQPPIMSYTLEPIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 120

Query: 137 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 196
           LLK+WSG RKPIKC+LFSWDDSFLITGSADGMICVWSMI LLDVE   +SQPILYCLMEH
Sbjct: 121 LLKIWSGQRKPIKCVLFSWDDSFLITGSADGMICVWSMIGLLDVELVGNSQPILYCLMEH 180

Query: 197 KSSLTGLLAMSVCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 256
            SSLTGLL MS C+ SIIISSSL+GSLKFWDL+SGMI G+QAHTEGITAIVLHPTEQLLF
Sbjct: 181 NSSLTGLLTMSGCSMSIIISSSLNGSLKFWDLMSGMIRGTQAHTEGITAIVLHPTEQLLF 240

Query: 257 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 316
           SG+ DG+IFAS+L FG+DNCI +K+NQLLAPKGHKGAITALAFS+MDLIS SEDCT+C W
Sbjct: 241 SGTADGRIFASRLAFGLDNCITIKENQLLAPKGHKGAITALAFSQMDLISASEDCTICKW 300

Query: 317 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPANLLNST 376
           DIS QRIIQKLDHKKGRITNL+A+P  SLIS SNRKR LN FS+SSLDKYPQPANLL ST
Sbjct: 301 DISGQRIIQKLDHKKGRITNLLAVPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLLKST 360

Query: 377 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 436
           IPLFP L PL EN NSI F+S  SLNQQI D KTEGTSAAIQMKVETSLE ++WAS++TK
Sbjct: 361 IPLFPSLQPLRENLNSIGFTSTGSLNQQILDTKTEGTSAAIQMKVETSLERRVWASKMTK 420

Query: 437 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 489
           QVM+MNNHLQSRLLDMMRIRLF   K++S +KK K +RDRVA  REK+P SFH
Sbjct: 421 QVMDMNNHLQSRLLDMMRIRLFGPTKISSSSKKRKDERDRVARTREKRPLSFH 473

[Close]

BLAST of Moc03g29640 vs. NCBI nr
Match: KAA0055324.1 (protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 778.5 bits (2009), Expect = 3.4e-221
Identity = 386/473 (81.61%), Postives = 421/473 (89.01%), Query Frame = 0


Query: 17  MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 76
           MGNGGE  ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 1   MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 60

Query: 77  KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 136
           KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG  SGNIHLWEVGSGK
Sbjct: 61  KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 120

Query: 137 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 196
           LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE   +SQP++YCLM+H
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 180

Query: 197 KSSLTGLLAMSVCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 256
           KSSLTGLL MS C+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 181 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 240

Query: 257 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 316
           SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 241 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 300

Query: 317 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPANLLNST 376
           DIS QRIIQKLDHKKGRITNLVAIP  SLIS SNRKR LN FS+SSLDKYPQPANL+ ST
Sbjct: 301 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 360

Query: 377 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 436
           IPLF  L PL+EN NSI F+S  SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 361 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 420

Query: 437 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 489
           QVM+MNNHLQSR+LDMMRIRLF+  K+NS +KK K +RDRVA   EK+PSSFH
Sbjct: 421 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKRPSSFH 473

[Close]

BLAST of Moc03g29640 vs. ExPASy Swiss-Prot
Match: Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 7.8e-59
Identity = 153/444 (34.46%), Postives = 238/444 (53.60%), Query Frame = 0


Query: 26  LAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGS 85
           + V +  ++  GI  WD++TG   L    CASP +GL  +  +FL +SQ     +   GS
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--SGS 62

Query: 86  IFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHR 145
           IF WS  KPQ  ++SYP+EPI  LA+  +G YL GG +SG+I+LWEV +GKLLK W GH 
Sbjct: 63  IFYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHY 122

Query: 146 KPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILY--CLMEHKSSLTGL 205
           + + C++FS DDS L++GS DG I VWS+I L D + +R     LY     EH  S+T +
Sbjct: 123 RSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFD-DFQRQQGNTLYEHNFNEHTMSVTDI 182

Query: 206 -LAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQ 265
            +    C ++IISSS D + K W L  G ++ +      I A+ L P   + ++G+ D  
Sbjct: 183 VIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARD-- 242

Query: 266 IFASKLEFGVDNCIAMKDNQLLAPKGHKG-AITALAFSRMD--LISTSEDCTVCIWDISS 325
              SK+  G  N  +    Q+L     KG AIT LA+      LIS SED  VC+WD  S
Sbjct: 243 ---SKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKS 302

Query: 326 QRIIQKLDHKKGR---ITNLVAIPWPSLISMSNRK----RALNHFSVSSLDKYPQPA-NL 385
            R ++ L H KG      N + I   ++++ SN+     ++        L+KY +P  + 
Sbjct: 303 LRHVRTLIHAKGSRKGPVNNIQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYERPVEDT 362

Query: 386 LNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVE-TSLESQMWA 445
           ++  + + PP  P  +      F S D +++Q+ +++ +G SAA +M++E   LE     
Sbjct: 363 MDGIVTVDPP--PFSDVPVYSSFLSADLIDEQVKELQQQG-SAATEMEMERLKLE----- 422

Query: 446 SRITKQVMEMNNHLQSRLLDMMRI 455
               K+ ++MN   Q    +++++
Sbjct: 423 ---YKRSLQMNEQWQKNYENLLQV 427

[Close]

BLAST of Moc03g29640 vs. ExPASy Swiss-Prot
Match: A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-34
Identity = 101/328 (30.79%), Postives = 168/328 (51.22%), Query Frame = 0


Query: 39  TIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGSIFIWSL-NKPQPP 98
           T+W+  TG  LL      +   GL  L  ++L+       G +G   I +W L  + Q  
Sbjct: 21  TVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLG------GQLGKNYINVWELQRRDQLQ 80

Query: 99  LRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDD 158
            +     P+  L+++ +G+YL  G ++ +I+LWEV +G LL + + H + + C+ F+ D 
Sbjct: 81  QKIVCPGPVNCLSASPNGLYLVAG-IAESIYLWEVSTGHLLAILNSHYQDVTCLTFTDDS 140

Query: 159 SFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHKSSLTGL-LAMSVCTSIIISS 218
           S +I+G+ D ++ VW +  +L VE  R  +P  Y    H   +T +   +    + + +S
Sbjct: 141 SHIISGAKDSLVLVWGLYSVLQVETSRGPEP-RYVWSRHSLPITDVQCGIGGPQARVATS 200

Query: 219 SLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNC- 278
           SLD ++K WD+ SG ++ S      IT++   P E  LF G  DG I+   L    +   
Sbjct: 201 SLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFCGGSDGVIYQVDLYTTPEQRE 260

Query: 279 IAMKDNQLLAPKGHKGAITALAFSRMD---LISTSEDCTVCIWDISSQRIIQKLDHKKGR 338
                 Q +  KGH+  +T L+ S +D   LIS S D TVC+WDI S++ ++ + H +G 
Sbjct: 261 RPFHPEQEMVFKGHRNQVTCLSVS-LDGSMLISGSHDETVCVWDIQSKQSLRSVPH-RGP 320

Query: 339 ITNLVAIPWPSLISMSNRKRA--LNHFS 359
           +TN+  I  PS +  +  K +  L HFS
Sbjct: 321 VTNVFIIAAPSNMLRAESKPSFPLPHFS 338

[Close]

BLAST of Moc03g29640 vs. ExPASy Swiss-Prot
Match: Q3SZD4 (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.8e-29
Identity = 98/343 (28.57%), Postives = 163/343 (47.52%), Query Frame = 0


Query: 26  LAVCSDKNMGS-GITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGG 85
           +AVC+D         +W++ +G  LL      + P GL  L  E+L+A+Q      +G  
Sbjct: 7   VAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------LGKN 66

Query: 86  SIFIWSL-NKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSG 145
            I  W L  K Q   +     P+  L ++ +G+Y+  G +S NI+LWEV +G LL + S 
Sbjct: 67  YICAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLAG-ISENIYLWEVSTGNLLVILSR 126

Query: 146 HRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHKSSLTGL 205
           H + + C+ F+ D S  I+G  D ++  WS+  +L  +  R+  P  +    H   +T L
Sbjct: 127 HYQDVSCLQFTGDSSHFISGGKDCLVLAWSLCSVLQADPSRTPAP-RHVWSRHTLPITDL 186

Query: 206 -LAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQ 265
                   + + ++SLD ++K W++ SG ++ S     GI A+ +   E  +F G  DG 
Sbjct: 187 HCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMFCGGSDGS 246

Query: 266 IFASKL---EFGVDNCIAMKDNQLLAPKGHKGAITALAFSR--MDLISTSEDCTVCIWDI 325
           IF   L       +     +       +GH+  +T L+ S     L+S S D TV +WD+
Sbjct: 247 IFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDV 306

Query: 326 SSQRIIQKLDHKKGRITN--LVAIPWPSLISMSNRKRALNHFS 359
            SQ+ ++ +   KG +TN  ++  P   L S       L HF+
Sbjct: 307 QSQQCLRTVT-LKGPVTNACIMLAPVSMLSSDFRPGLPLPHFN 340

[Close]

BLAST of Moc03g29640 vs. ExPASy Swiss-Prot
Match: Q68EI0 (WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.4e-29
Identity = 89/324 (27.47%), Postives = 161/324 (49.69%), Query Frame = 0


Query: 40  IWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLR 99
           ++D  TG   L      +    L  L  E+++ +Q      +G   I +W + + +  L+
Sbjct: 22  VYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQ------LGKNYINVWEIQR-KDQLQ 81

Query: 100 SYPLEP--IGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDD 159
              + P  +  L ++ DG+Y+  G ++  I+LWEV +G LL + S H + + CI F+ D 
Sbjct: 82  QKIVCPGIVTCLCASPDGLYVLAG-IAEAIYLWEVSTGNLLAILSRHFQDLSCIKFTDDS 141

Query: 160 SFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHKSSLTGL-LAMSVCTSIIISS 219
           S  ++G  D +  +W++  ++ ++  R+ +P  + L  H   +T +   +    + + ++
Sbjct: 142 SHFVSGGKDNLAFIWNLSSVVQLDSSRTPEP-RHILSRHSLPITDIHCGLMGPQARVATA 201

Query: 220 SLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQIFASKL---EFGVD 279
           SLD ++K W++ SG ++ S     GI ++   P E  LF G  DG IF   L       D
Sbjct: 202 SLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLFCGGSDGNIFQVSLCSTSLSRD 261

Query: 280 NCIAMKDNQLLAPKGHKGAITALAFSRMD---LISTSEDCTVCIWDISSQRIIQKLDHKK 339
                        KGH+  +T L+ S MD   L+S S D TV +WD+ S++ I  ++H +
Sbjct: 262 KTFQSDSEGNQVFKGHRNLVTCLSVS-MDGTVLLSGSNDETVRMWDVQSKQCIWTINH-R 321

Query: 340 GRITNLVAIPWPSLISMSNRKRAL 355
           G +TN   IP P+ + +S+   A+
Sbjct: 322 GPVTNAAIIPAPANMFLSDSHPAV 334

[Close]

BLAST of Moc03g29640 vs. ExPASy Swiss-Prot
Match: Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 3.2e-28
Identity = 102/344 (29.65%), Postives = 168/344 (48.84%), Query Frame = 0


Query: 26  LAVCSDK--NMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGG 85
           +AVC+D    M S I +W++ +G  LL      + P GL  L  E+L+A+Q      +G 
Sbjct: 7   VAVCTDSAAPMWSCI-VWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ------LGK 66

Query: 86  GSIFIWSL-NKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWS 145
             I  W L  K Q   +     P+  L ++ +G+Y+  G ++ +IHLWEV +G LL + S
Sbjct: 67  NYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAG-VAESIHLWEVSTGNLLVILS 126

Query: 146 GHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHKSSLTG 205
            H + + C+ F+ D S  I+G  D ++ VWS+  +L  +  R   P  +    H   +T 
Sbjct: 127 RHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIPAP-RHVWSHHALPITD 186

Query: 206 L-LAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDG 265
           L        + + +SSLD ++K W++ SG ++ S      I A+ +   E  +F G  +G
Sbjct: 187 LHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEG 246

Query: 266 QIFASKL---EFGVDNCIAMKDNQLLAPKGHKGAITALAFSR--MDLISTSEDCTVCIWD 325
            IF   L       +     + +     KGH+  +T L+ S     L+S S D TV +WD
Sbjct: 247 SIFQVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWD 306

Query: 326 ISSQRIIQKLDHKKGRITNLVAIPWP-SLISMSNR-KRALNHFS 359
           + S++ I+ +   KG +TN   +  P S++S   R    L HF+
Sbjct: 307 VQSKQCIRTV-ALKGPVTNAAILLAPVSMLSSDFRPSLPLPHFN 340

[Close]

BLAST of Moc03g29640 vs. ExPASy TrEMBL
Match: A0A6J1C861 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008865 PE=4 SV=1)

HSP 1 Score: 990.3 bits (2559), Expect = 2.8e-285
Identity = 488/488 (100.00%), Postives = 488/488 (100.00%), Query Frame = 0


Query: 1   MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY 60
           MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY
Sbjct: 1   MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY 60

Query: 61  GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG 120
           GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG
Sbjct: 61  GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG 120

Query: 121 GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV 180
           GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV
Sbjct: 121 GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV 180

Query: 181 EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE 240
           EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE
Sbjct: 181 EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE 240

Query: 241 GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR 300
           GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR
Sbjct: 241 GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR 300

Query: 301 MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS 360
           MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS
Sbjct: 301 MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS 360

Query: 361 SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKV 420
           SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKV
Sbjct: 361 SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKV 420

Query: 421 ETSLESQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMR 480
           ETSLESQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMR
Sbjct: 421 ETSLESQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMR 480

Query: 481 EKQPSSFH 489
           EKQPSSFH
Sbjct: 481 EKQPSSFH 488

[Close]

BLAST of Moc03g29640 vs. ExPASy TrEMBL
Match: A0A6J1CA98 (protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008865 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 2.1e-232
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 1   MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY 60
           MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY
Sbjct: 1   MGEFCCFQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPY 60

Query: 61  GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG 120
           GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG
Sbjct: 61  GLICLRNEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAG 120

Query: 121 GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV 180
           GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV
Sbjct: 121 GALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDV 180

Query: 181 EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE 240
           EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE
Sbjct: 181 EHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTE 240

Query: 241 GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR 300
           GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR
Sbjct: 241 GITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSR 300

Query: 301 MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS 360
           MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS
Sbjct: 301 MDLISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVS 360

Query: 361 SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIR 394
           SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIR
Sbjct: 361 SLDKYPQPANLLNSTIPLFPPLHPLEENWNSIR 393

[Close]

BLAST of Moc03g29640 vs. ExPASy TrEMBL
Match: A0A1S4DU43 (protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 5.2e-223
Identity = 390/483 (80.75%), Postives = 426/483 (88.20%), Query Frame = 0


Query: 7   FQFPLSEPREMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLR 66
           F F L E ++MGNGGE  ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLR
Sbjct: 8   FCFHLFEHQKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLR 67

Query: 67  NEFLVASQTRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGN 126
           NEF VASQTRKEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG  SGN
Sbjct: 68  NEFFVASQTRKEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGN 127

Query: 127 IHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSS 186
           IHLWEVGSGKLLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE   +S
Sbjct: 128 IHLWEVGSGKLLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENS 187

Query: 187 QPILYCLMEHKSSLTGLLAMSVCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAI 246
           QP++YCLM+HKSSLTGLL MS C+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAI
Sbjct: 188 QPLVYCLMQHKSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAI 247

Query: 247 VLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLIS 306
           VLHPTEQ+LFSG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS
Sbjct: 248 VLHPTEQVLFSGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLIS 307

Query: 307 TSEDCTVCIWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKY 366
            SEDCTVCIWDIS QRIIQKLDHKKGRITNLVAIP  SLIS SNRKR LN FS+SSLDKY
Sbjct: 308 ASEDCTVCIWDISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKY 367

Query: 367 PQPANLLNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLE 426
           PQPANL+ STIPLF  L PL+EN NSI F+S  SLNQQI DMKTEGTSAAIQMKVETSLE
Sbjct: 368 PQPANLMKSTIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLE 427

Query: 427 SQMWASRITKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPS 486
            +MWASR+TKQVM+MNNHLQSR+LDMMRIRLF+  K+NS +KK K +RDRVA   EK PS
Sbjct: 428 RRMWASRMTKQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPS 487

Query: 487 SFH 489
           SFH
Sbjct: 488 SFH 490

[Close]

BLAST of Moc03g29640 vs. ExPASy TrEMBL
Match: A0A5A7UJJ9 (Protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001670 PE=4 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 1.7e-221
Identity = 386/473 (81.61%), Postives = 421/473 (89.01%), Query Frame = 0


Query: 17  MGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTR 76
           MGNGGE  ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQTR
Sbjct: 1   MGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQTR 60

Query: 77  KEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGK 136
           KEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG  SGNIHLWEVGSGK
Sbjct: 61  KEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGSGK 120

Query: 137 LLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEH 196
           LLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE   +SQP++YCLM+H
Sbjct: 121 LLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLMQH 180

Query: 197 KSSLTGLLAMSVCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLF 256
           KSSLTGLL MS C+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+LF
Sbjct: 181 KSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQVLF 240

Query: 257 SGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVCIW 316
           SG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVCIW
Sbjct: 241 SGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVCIW 300

Query: 317 DISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPANLLNST 376
           DIS QRIIQKLDHKKGRITNLVAIP  SLIS SNRKR LN FS+SSLDKYPQPANL+ ST
Sbjct: 301 DISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMKST 360

Query: 377 IPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRITK 436
           IPLF  L PL+EN NSI F+S  SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+TK
Sbjct: 361 IPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRMTK 420

Query: 437 QVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 489
           QVM+MNNHLQSR+LDMMRIRLF+  K+NS +KK K +RDRVA   EK+PSSFH
Sbjct: 421 QVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKRPSSFH 473

[Close]

BLAST of Moc03g29640 vs. ExPASy TrEMBL
Match: A0A1S4DUX3 (protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484316 PE=4 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 2.2e-221
Identity = 386/475 (81.26%), Postives = 422/475 (88.84%), Query Frame = 0


Query: 15  REMGNGGEREALAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQ 74
           ++MGNGGE  ALAVCSD+NMG GITIWDV+TG TLLHIP+CASPPYG ICLRNEF VASQ
Sbjct: 89  QKMGNGGESMALAVCSDRNMGLGITIWDVKTGQTLLHIPSCASPPYGFICLRNEFFVASQ 148

Query: 75  TRKEGSVGGGSIFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGS 134
           TRKEGSVGGG+IFIWSLNKPQPP+ SY LE IGPLASTKD VYLAGG  SGNIHLWEVGS
Sbjct: 149 TRKEGSVGGGTIFIWSLNKPQPPVMSYTLETIGPLASTKDSVYLAGGTHSGNIHLWEVGS 208

Query: 135 GKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLM 194
           GKLLKLWSGH KP+KC+LFSWDDSFLITGS+DGMICVWSMI LLDVE   +SQP++YCLM
Sbjct: 209 GKLLKLWSGHHKPVKCVLFSWDDSFLITGSSDGMICVWSMISLLDVELVENSQPLVYCLM 268

Query: 195 EHKSSLTGLLAMSVCT-SIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQL 254
           +HKSSLTGLL MS C+ SIIISSSLDGSLKFWDL+SGMI G+QAH EGITAIVLHPTEQ+
Sbjct: 269 QHKSSLTGLLTMSGCSMSIIISSSLDGSLKFWDLMSGMIKGTQAHIEGITAIVLHPTEQV 328

Query: 255 LFSGSVDGQIFASKLEFGVDNCIAMKDNQLLAPKGHKGAITALAFSRMDLISTSEDCTVC 314
           LFSG+VDGQI AS+LE G DNCI +K+NQ+LAPKGHKGAITALAFS+ DLIS SEDCTVC
Sbjct: 329 LFSGTVDGQISASRLELGFDNCITVKENQILAPKGHKGAITALAFSQTDLISASEDCTVC 388

Query: 315 IWDISSQRIIQKLDHKKGRITNLVAIPWPSLISMSNRKRALNHFSVSSLDKYPQPANLLN 374
           IWDIS QRIIQKLDHKKGRITNLVAIP  SLIS SNRKR LN FS+SSLDKYPQPANL+ 
Sbjct: 389 IWDISRQRIIQKLDHKKGRITNLVAIPRSSLISTSNRKRVLNQFSMSSLDKYPQPANLMK 448

Query: 375 STIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVETSLESQMWASRI 434
           STIPLF  L PL+EN NSI F+S  SLNQQI DMKTEGTSAAIQMKVETSLE +MWASR+
Sbjct: 449 STIPLFSSLQPLQENLNSIGFTSTSSLNQQILDMKTEGTSAAIQMKVETSLERRMWASRM 508

Query: 435 TKQVMEMNNHLQSRLLDMMRIRLFKSAKVNSPTKKLKGKRDRVAGMREKQPSSFH 489
           TKQVM+MNNHLQSR+LDMMRIRLF+  K+NS +KK K +RDRVA   EK PSSFH
Sbjct: 509 TKQVMDMNNHLQSRVLDMMRIRLFEPTKINSSSKKQKDERDRVAKKMEKLPSSFH 563

[Close]

BLAST of Moc03g29640 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 229.6 bits (584), Expect = 5.5e-60
Identity = 153/444 (34.46%), Postives = 238/444 (53.60%), Query Frame = 0


Query: 26  LAVCSDKNMGSGITIWDVETGDTLLHIPTCASPPYGLICLRNEFLVASQTRKEGSVGGGS 85
           + V +  ++  GI  WD++TG   L    CASP +GL  +  +FL +SQ     +   GS
Sbjct: 3   ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--SGS 62

Query: 86  IFIWSLNKPQPPLRSYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHR 145
           IF WS  KPQ  ++SYP+EPI  LA+  +G YL GG +SG+I+LWEV +GKLLK W GH 
Sbjct: 63  IFYWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHY 122

Query: 146 KPIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILY--CLMEHKSSLTGL 205
           + + C++FS DDS L++GS DG I VWS+I L D + +R     LY     EH  S+T +
Sbjct: 123 RSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFD-DFQRQQGNTLYEHNFNEHTMSVTDI 182

Query: 206 -LAMSVCTSIIISSSLDGSLKFWDLISGMIMGSQAHTEGITAIVLHPTEQLLFSGSVDGQ 265
            +    C ++IISSS D + K W L  G ++ +      I A+ L P   + ++G+ D  
Sbjct: 183 VIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARD-- 242

Query: 266 IFASKLEFGVDNCIAMKDNQLLAPKGHKG-AITALAFSRMD--LISTSEDCTVCIWDISS 325
              SK+  G  N  +    Q+L     KG AIT LA+      LIS SED  VC+WD  S
Sbjct: 243 ---SKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKS 302

Query: 326 QRIIQKLDHKKGR---ITNLVAIPWPSLISMSNRK----RALNHFSVSSLDKYPQPA-NL 385
            R ++ L H KG      N + I   ++++ SN+     ++        L+KY +P  + 
Sbjct: 303 LRHVRTLIHAKGSRKGPVNNIQIVRKTIVANSNKTQVSWKSRGALIPPPLEKYERPVEDT 362

Query: 386 LNSTIPLFPPLHPLEENWNSIRFSSNDSLNQQIFDMKTEGTSAAIQMKVE-TSLESQMWA 445
           ++  + + PP  P  +      F S D +++Q+ +++ +G SAA +M++E   LE     
Sbjct: 363 MDGIVTVDPP--PFSDVPVYSSFLSADLIDEQVKELQQQG-SAATEMEMERLKLE----- 422

Query: 446 SRITKQVMEMNNHLQSRLLDMMRI 455
               K+ ++MN   Q    +++++
Sbjct: 423 ---YKRSLQMNEQWQKNYENLLQV 427

[Close]

BLAST of Moc03g29640 vs. TAIR 10
Match: AT1G11160.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 6.6e-13
Identity = 49/177 (27.68%), Postives = 82/177 (46.33%), Query Frame = 0


Query: 88  IWSLNKPQPPLR-SYPLEPIGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRK 147
           +WS+ K   P+       P+  +A   + V +  GA SG I LW++   K+++ ++GHR 
Sbjct: 42  LWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRS 101

Query: 148 PIKCILFSWDDSFLITGSADGMICVWSMICLLDVEHERSSQPILYCLMEHKSSLTGL--L 207
               + F     FL +GS+D  + VW      D   +        C+  +K    G+  +
Sbjct: 102 NCSAVEFHPFGEFLASGSSDTNLRVW------DTRKKG-------CIQTYKGHTRGISTI 161

Query: 208 AMSVCTSIIISSSLDGSLKFWDLISGMIMGS-QAHTEGITAIVLHPTEQLLFSGSVD 261
             S     ++S  LD  +K WDL +G ++   + H   I ++  HP E LL +GS D
Sbjct: 162 EFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSAD 205

[Close]

BLAST of Moc03g29640 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 4.3e-12
Identity = 56/248 (22.58%), Postives = 111/248 (44.76%), Query Frame = 0


Query: 106 IGPLASTKDGVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSA 165
           I  +A + D  ++   +    + LW+V +G L+K   GH     C+ F+   + +++GS 
Sbjct: 74  ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133

Query: 166 DGMICVWSMICLLDVEHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFW 225
           D  + +W +          ++   L  L  H   +T  +  +   S+I+SSS DG  + W
Sbjct: 134 DETVRIWDV----------TTGKCLKVLPAHSDPVTA-VDFNRDGSLIVSSSYDGLCRIW 193

Query: 226 DLISGMIMGSQAHTEG--ITAIVLHPTEQLLFSGSVDGQIFASKLEFGVDNCIAMKDNQL 285
           D  +G  + +    E   ++ +   P  + +  G++D  +    +              L
Sbjct: 194 DSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNIS---------SAKFL 253

Query: 286 LAPKGHKGA--ITALAFSRMD---LISTSEDCTVCIWDISSQRIIQKLDHKKGRITNLVA 345
               GH  A    + AFS  +   ++S SED  V +W+++S++++QKL+     + N+  
Sbjct: 254 KTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC 301

Query: 346 IPWPSLIS 347
            P  +LI+
Sbjct: 314 HPTENLIA 301

[Close]

BLAST of Moc03g29640 vs. TAIR 10
Match: AT1G61210.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-09
Identity = 36/147 (24.49%), Postives = 72/147 (48.98%), Query Frame = 0


Query: 115 GVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSM 174
           G +LA G+   N+ +W++     ++ + GH + I  I F+ D  ++++G  D ++ VW +
Sbjct: 112 GEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171

Query: 175 ICLLDVEHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMG 234
                     ++  +L+    H+  +   L       ++ + S D ++KFWDL +  ++G
Sbjct: 172 ----------TAGKLLHEFKFHEGPIRS-LDFHPLEFLLATGSADRTVKFWDLETFELIG 231

Query: 235 S-QAHTEGITAIVLHPTEQLLFSGSVD 261
           S +    G+ +I  HP  + LF G  D
Sbjct: 232 STRPEATGVRSIKFHPDGRTLFCGLDD 247

[Close]

BLAST of Moc03g29640 vs. TAIR 10
Match: AT1G61210.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-09
Identity = 36/147 (24.49%), Postives = 72/147 (48.98%), Query Frame = 0


Query: 115 GVYLAGGALSGNIHLWEVGSGKLLKLWSGHRKPIKCILFSWDDSFLITGSADGMICVWSM 174
           G +LA G+   N+ +W++     ++ + GH + I  I F+ D  ++++G  D ++ VW +
Sbjct: 112 GEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171

Query: 175 ICLLDVEHERSSQPILYCLMEHKSSLTGLLAMSVCTSIIISSSLDGSLKFWDLISGMIMG 234
                     ++  +L+    H+  +   L       ++ + S D ++KFWDL +  ++G
Sbjct: 172 ----------TAGKLLHEFKFHEGPIRS-LDFHPLEFLLATGSADRTVKFWDLETFELIG 231

Query: 235 S-QAHTEGITAIVLHPTEQLLFSGSVD 261
           S +    G+ +I  HP  + LF G  D
Sbjct: 232 STRPEATGVRSIKFHPDGRTLFCGLDD 247

The following BLAST results are available for this feature:

BLAST of Moc03g29640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137407.1	5.8e-285	100.00	protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Momordica charantia]	[more]
XP_022137408.1	4.3e-232	100.00	protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Momordica charantia]	[more]
XP_016899511.1	1.1e-222	80.75	PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo]	[more]
XP_038894085.1	2.6e-221	82.03	protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Benincasa hispida]	[more]
KAA0055324.1	3.4e-221	81.61	protein ROOT INITIATION DEFECTIVE 3-like isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of Moc03g29640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B4	7.8e-59	34.46	Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1...	[more]
A0A1L8HX76	1.3e-34	30.79	WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1	[more]
Q3SZD4	3.8e-29	28.57	WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1	[more]
Q68EI0	6.4e-29	27.47	WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1	[more]
Q9BV38	3.2e-28	29.65	WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2	[more]

BLAST of Moc03g29640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C861	2.8e-285	100.00	protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1CA98	2.1e-232	100.00	protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Momordica charantia OX=36...	[more]
A0A1S4DU43	5.2e-223	80.75	protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5A7UJJ9	1.7e-221	81.61	Protein ROOT INITIATION DEFECTIVE 3-like isoform X2 OS=Cucumis melo var. makuwa ...	[more]
A0A1S4DUX3	2.2e-221	81.26	protein ROOT INITIATION DEFECTIVE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Moc03g29640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49180.1	5.5e-60	34.46	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G11160.1	6.6e-13	27.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	4.3e-12	22.58	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G61210.1	2.0e-09	24.49	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G61210.2	2.0e-09	24.49	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 303..317 score: 35.87 coord: 213..227 score: 35.67 coord: 160..174 score: 34.74
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 186..226 e-value: 0.18 score: 20.9 coord: 134..173 e-value: 2.2E-8 score: 43.9 coord: 229..267 e-value: 0.89 score: 17.3 coord: 94..131 e-value: 96.0 score: 4.5 coord: 279..316 e-value: 3.1E-4 score: 30.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 285..316 e-value: 0.0022 score: 18.8 coord: 136..173 e-value: 4.1E-6 score: 27.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 141..174 score: 12.17936
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 193..235 score: 9.171722
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 286..325 score: 11.277069
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 233..447 e-value: 4.9E-17 score: 64.3
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 19..232 e-value: 2.5E-29 score: 104.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 463..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 467..481
None	No IPR available	PANTHER	PTHR18763:SF4	PROTEIN ROOT INITIATION DEFECTIVE 3-LIKE	coord: 22..474
None	No IPR available	PANTHER	PTHR18763	WD-REPEAT PROTEIN 18	coord: 22..474
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 286..319 score: 8.623787
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 141..174 score: 10.15287
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 213..227
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 303..317
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 27..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g29640.1	Moc03g29640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005656	nuclear pre-replicative complex
cellular_component	GO:0097344	Rix1 complex
molecular_function	GO:0005515	protein binding