Moc03g29470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g29470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	MADS-box transcription factor 6-like
Location	chr3: 21061190 .. 21063828 (-)
RNA-Seq Expression	Moc03g29470
Synteny	Moc03g29470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGGGAAAGTGGAGCTGAAGAGAATCGAAAATCCGACGAGTCGGCAGGTGACGTTCTCGAAGCGTCGGAATGGGCTTTTGAAGAAAGCCTACGAGCTCTCCGTCCTCTGCGACGCCGAAGTTGCCCTTCTCGTCTTTTCCCCTTCCGGCAAGGCCTACCAGTTCTCCAGCCACGAGTTCATTTCCTAATTCCTATACCCTTTTTTCTTCATTTCATCCTCCATCTAACAAGAAAATTTAATTTAAATTTGTTAAAGTTTTATTTCTAATTTAATAATTTAGAATGTGTAATTTTTGTTGATTGGGTGTAGCATGGACGGAACCCTAGCCAGGTACCGGAGTGATATGGGGCTACCGCAATCCAACCACCCACATTCACGAGTCATGGTGCTTAATTTAATTTAATTACGGAGCTAATTAATTAATTCTGTTCATGTACGTGTTGTGATTTGTATTGTAATTGTGGGTTTGTAGTTCTGGAAGAGTGAGATGGAGGAGATGAGGAGATCAATAAGCAGCTTGGAGTCCAGACTTAGGTAATATTAATTAATTCATTATTTTTAAATTAATAATTAATTGAATACGTCATGAAAATTTGTGTATTATATTTGTTGGGTGGGTAGGCATTTTGCTGGAGAGGATTTAGGACCATTGAGCGTCAAGGATCTGAAACAGCTTGAAAGACAACTGAGTGTAGGAATTGAACGTGTGCGCTCTAAAAAGGTAAAACCCTCTTAATTTCTGTCAATTTTGTGTCTAATTTGATACTTCTCTTAGGAATTTTATAGATGTTCACTGAATATTGGCATATATTGATTCCAGTTTACAACCTATAAATTGCTTATGTGTTGTCACACCCGTTGAACTATAATAAAGTTATGTGGAATTTTTTTTTTTCAACAACGGGTGAGGTGGGGATTTGAACCAACCTCTGCCAAGTTTATACAAAAGTTTTTATATTTTTTAAATGATAATGGGTGTTTAGAAACTGAAAACATGGAAACCAAAAAGATTAGGGCTAAGGAGCAATTCAGTTGGCAAGACTTTGAGGTCTCTCTTGGTCATACTGACTTAGACATTTCCAGTTTAAGCCTTATGTGAGGTTTTTTTTTATTAAATATTTATAACCTAAAATCGGTGCCATGTGGCTTACATTAGAAGTTCCTACCTACTACCATAACCAACGTTGCGGGACTCTTCCTCGAATGAAAAGTGGGGAAGAGGGAATCCCGACTATGCATTTCGCAGGGCTTGAACCAGCCAGGGAAGGGGTATCCCCATTCTCCCTCAAGCTTACTACACCCTCCGCCGGTGGTTTCCAATGAGCTTAATACTAAAAGCCTCGCTCCGAATCGTCCCAGTTATAAGAAGAAAAAAAAAAACAAAATTAAAGAGATTAGGGCTAGCGCATTAGCTTTGTGGTGGGTCAGTTGGGTAAAATTATAACTTTTTTTTCTCTTTTAATGTGATTCATTGAACAGAGACGCATCATCTCAGAGCACATAAACATGTTGAAAAGGAAGGTAACGTTATCACTTCTCAACTTTCCCCATTCTTCCTTTATCCACCACAGTCGTTTTCTACAGAGACGACAACAAAAACGAAGACACATATTTTTAAAATTAACTGTTGAGTGTCGTCTTAAATATGCAGTACAAGAGCGTACAAGAGGAGCACAGCCGCCTGCAGAAAAGAGTAAGAAAATTTGTCCAAATTCAAACGCACAAAATTAAACTTTAAAAAGGGTTTACAAACTTTTCAACTTTCCTTGTTAGGTTTAATATGTTTCAACTTTCAATCTTACGTCTAACGAATTTTTTACCTTTTAATTTTGTGTCTATAAGACCTTCAATCTTAAAAAGATCCTTCAGAGGTTAGAGACCTATTAAATACACCATGAAAAACTTAGGGACCTATTACTAGTTAATTATATATTTTAGTCTGTAATATTCTAGTGTTTTTTCAATTTAGTCCCTTGTGTTTTAACATTTTTCAATGATATTGTTTTCGTGAATGATGTTAGAATTGATCGGTAATTAAGCTTACATGATAAGATAGTTATTGAATTATCATAAATTTAAATGAGAATTTAGACCACTCAAACAAAAAAGTTGAAATTTCCACAAATTTCTTAAAAATTTAGAGGTGGAATTAGAATTTTTTCTATTAGAGAGCCTAATTCACATTCCAAAGTTTTGCCAGCTCAGTTACTAATGTGTTATCATCAAGAAACCTAAACTTTCACCGCAAAAAAAAAAAAAGTAAATTGTTAAAACACAAGAGCCTCTTAAAAGAACATAGATTTAATGGAAAAGACATCCGAAATTAAAACATATATTTAGCTCTTATTAAATATTTTATAAAATTTAGAGACTTATCAATGGAGAATTTTCGTTTCTTCTCCGATGGGTGTGTGTTCTTGTAATCTCAGTTGAATCAGCTTAAGGATGTGGATGTGACAGCTTCAAGAACCAGCTTAGATGCTAATGCCAGCTCTGCACTAGAAATGTACGTACTAAATAAAAACTGCTCAATTCGTAAAATATTTCACAACAAAAGCCAGAATTAACAAGCAAATATTATTTGGGAAATTTGCATGCAGGGCTTTTCAGGTGGATGGAGTACTAATTTAA

mRNA sequence

ATGGGAAGAGGGAAAGTGGAGCTGAAGAGAATCGAAAATCCGACGAGTCGGCAGGTGACGTTCTCGAAGCGTCGGAATGGGCTTTTGAAGAAAGCCTACGAGCTCTCCGTCCTCTGCGACGCCGAAGTTGCCCTTCTCGTCTTTTCCCCTTCCGGCAAGGCCTACCAGTTCTCCAGCCACGACATGGACGGAACCCTAGCCAGGTACCGGAGTGATATGGGGCTACCGCAATCCAACCACCCACATTCACGAGTCATGTTCTGGAAGAGTGAGATGGAGGAGATGAGGAGATCAATAAGCAGCTTGGAGTCCAGACTTAGGCATTTTGCTGGAGAGGATTTAGGACCATTGAGCGTCAAGGATCTGAAACAGCTTGAAAGACAACTGAGTGTAGGAATTGAACGTGTGCGCTCTAAAAAGAGACGCATCATCTCAGAGCACATAAACATGTTGAAAAGGAAGTACAAGAGCGTACAAGAGGAGCACAGCCGCCTGCAGAAAAGATTGAATCAGCTTAAGGATGTGGATGTGACAGCTTCAAGAACCAGCTTAGATGCTAATGCCAGCTCTGCACTAGAAATGGCTTTTCAGGTGGATGGAGTACTAATTTAA

Coding sequence (CDS)

ATGGGAAGAGGGAAAGTGGAGCTGAAGAGAATCGAAAATCCGACGAGTCGGCAGGTGACGTTCTCGAAGCGTCGGAATGGGCTTTTGAAGAAAGCCTACGAGCTCTCCGTCCTCTGCGACGCCGAAGTTGCCCTTCTCGTCTTTTCCCCTTCCGGCAAGGCCTACCAGTTCTCCAGCCACGACATGGACGGAACCCTAGCCAGGTACCGGAGTGATATGGGGCTACCGCAATCCAACCACCCACATTCACGAGTCATGTTCTGGAAGAGTGAGATGGAGGAGATGAGGAGATCAATAAGCAGCTTGGAGTCCAGACTTAGGCATTTTGCTGGAGAGGATTTAGGACCATTGAGCGTCAAGGATCTGAAACAGCTTGAAAGACAACTGAGTGTAGGAATTGAACGTGTGCGCTCTAAAAAGAGACGCATCATCTCAGAGCACATAAACATGTTGAAAAGGAAGTACAAGAGCGTACAAGAGGAGCACAGCCGCCTGCAGAAAAGATTGAATCAGCTTAAGGATGTGGATGTGACAGCTTCAAGAACCAGCTTAGATGCTAATGCCAGCTCTGCACTAGAAATGGCTTTTCAGGTGGATGGAGTACTAATTTAA

Protein sequence

MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSHDMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTASRTSLDANASSALEMAFQVDGVLI

Homology

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BLAST of Moc03g29470 vs. NCBI nr
Match: XP_022137440.1 (truncated transcription factor CAULIFLOWER D-like [Momordica charantia])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK
Sbjct: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS
Sbjct: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180

Query: 181 RTSLDANASSALEMAFQVDGVLI 204
           RTSLDANASSALEMAFQVDGVLI
Sbjct: 181 RTSLDANASSALEMAFQVDGVLI 203

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BLAST of Moc03g29470 vs. NCBI nr
Match: XP_038895204.1 (truncated transcription factor CAULIFLOWER D-like isoform X1 [Benincasa hispida])

HSP 1 Score: 344.0 bits (881), Expect = 9.0e-91
Identity = 176/203 (86.70%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALL+FSPSGKAYQFSSH
Sbjct: 16  MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 75

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYR+D+GLPQSNHPHSR +FWKSE+E+M+RSISSLE+RLRHFAGEDL PLSVK
Sbjct: 76  DMDGTLARYRTDVGLPQSNHPHSRALFWKSEIEDMKRSISSLEARLRHFAGEDLEPLSVK 135

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           +LKQLERQ+SVGIER+RSKKRRII+EHIN+LKRKYK +QEEHSRLQKRLNQLKDV VT S
Sbjct: 136 ELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVAVTTS 195

Query: 181 RTSLDANASSALEMAFQVDGVLI 204
           R S DAN +SAL+M FQVDG++I
Sbjct: 196 RIS-DANGASALDMEFQVDGLMI 217

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BLAST of Moc03g29470 vs. NCBI nr
Match: XP_004145150.1 (truncated transcription factor CAULIFLOWER D [Cucumis sativus] >KAE8652629.1 hypothetical protein Csa_013390 [Cucumis sativus] >BAB21509.1 putative MADS-box protein [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 6.4e-89
Identity = 170/203 (83.74%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDA+VALL+FSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYR+D+GLPQSNHPHSR +FWK+EM++M+RSISS+E+RLRHF GEDL PL+VK
Sbjct: 61  DMDGTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           +LKQLERQ+SVGIER+RSKKRRII+EHIN+LKRKYK +QEEHSRLQKRLNQLKDV VT S
Sbjct: 121 ELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNS 180

Query: 181 RTSLDANASSALEMAFQVDGVLI 204
             + DAN +SALE+ FQVDG+LI
Sbjct: 181 SRNSDANPASALEIEFQVDGLLI 203

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BLAST of Moc03g29470 vs. NCBI nr
Match: XP_023001170.1 (MADS-box transcription factor 6-like [Cucurbita maxima])

HSP 1 Score: 335.1 bits (858), Expect = 4.2e-88
Identity = 172/201 (85.57%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKV+LKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALL+FSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYRSD+GLPQSNHPHSR + WKSEME+M+RSI SL++RLR+FAGEDLGPLS+K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALLWKSEMEDMKRSIISLDARLRNFAGEDLGPLSLK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           +LKQLERQ+S+GIERVRSKKRRI SEH+N LKRKYK +QEEHSRLQKRLNQLKDV VT S
Sbjct: 121 ELKQLERQMSIGIERVRSKKRRITSEHVNQLKRKYKGLQEEHSRLQKRLNQLKDVAVTTS 180

Query: 181 RTSLDANASSALEMAFQVDGV 202
           R S DANA SA EMAFQV+G+
Sbjct: 181 RIS-DANAFSAFEMAFQVNGL 200

[Close]

BLAST of Moc03g29470 vs. NCBI nr
Match: XP_022923727.1 (truncated transcription factor CAULIFLOWER D-like [Cucurbita moschata])

HSP 1 Score: 334.3 bits (856), Expect = 7.1e-88
Identity = 174/201 (86.57%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKV+LKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALL+FSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYRSD+GLPQSNHPHSR + WKSEME+M+RSI SL++RLR+FAGEDLG LS+K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALVWKSEMEDMKRSIISLDARLRNFAGEDLGLLSLK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           +LKQLERQ+SVGIERVRSKKRRI SEHIN LKRKYK +QEEHSRLQKRLNQLKDV VT S
Sbjct: 121 ELKQLERQMSVGIERVRSKKRRITSEHINQLKRKYKGLQEEHSRLQKRLNQLKDVGVTTS 180

Query: 181 RTSLDANASSALEMAFQVDGV 202
           R S DANA SAL+MAFQVDG+
Sbjct: 181 RIS-DANAFSALDMAFQVDGL 200

[Close]

BLAST of Moc03g29470 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-38
Identity = 86/170 (50.59%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRG+VELKRIEN  +RQVTFSKRRNGLLKKAYELSVLCDAEVAL++FS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMDGTLARYR-SDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSV 120
            +  TL RY+        SN+  S    W  EM +++    +L+   RH  GEDLGPLSV
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 121 KDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRL 170
           K+L+QLE+QL   + + R +K +++ E +  L+RK + + E + +L+ +L
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170

[Close]

BLAST of Moc03g29470 vs. ExPASy Swiss-Prot
Match: Q8LLR1 (Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-37
Identity = 89/198 (44.95%), Postives = 128/198 (64.65%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRG+VELKRIEN  +RQVTFSKRRNGLLKKAYELSVLCDAEVAL++FS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
               TL RY+     PQ N+       W  E+ +++    SL+   RH  GEDLGPLSVK
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           +L+ LE+QL   + + R +K +++ E +  L+RK + + + + +L+ +L + +   + A 
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKL-EAEGQSLKAI 180

Query: 181 RTSLDANASSALEMAFQV 199
           + S + + ++A   +F V
Sbjct: 181 QGSWNPSTATAGNSSFPV 197

[Close]

BLAST of Moc03g29470 vs. ExPASy Swiss-Prot
Match: Q7XUN2 (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 6.0e-37
Identity = 85/177 (48.02%), Postives = 117/177 (66.10%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRG+VELKRIEN  +RQVTFSKRRNGLLKKAYELSVLCDAEVAL++FS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMDGTLARYRSDMGLPQSNH---PHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPL 120
            ++ TL +Y S     Q ++          W  EM  ++  +  L+   RH  GEDLGPL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 121 SVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKD 175
           S+K+L+QLE+QL   + + R +K +I+ E ++ L+RK + + E + +L+ +L    D
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEAD 177

[Close]

BLAST of Moc03g29470 vs. ExPASy Swiss-Prot
Match: Q39081 (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana OX=3702 GN=CAL PE=1 SV=3)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36
Identity = 87/180 (48.33%), Postives = 122/180 (67.78%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRG+VELKRIEN  +RQVTFSKRR GLLKKA E+SVLCDAEV+L+VFS  GK +++SS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-MDGTLARY-RSDMGLPQSNHPHSRV---MFWKSEMEEMRRSISSLESRLRHFAGEDLG 120
             M+  L RY R      Q   P S V     W  E   ++  I  LE   RH+ GE+L 
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 PLSVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDV 176
           P+S+KDL+ LE+QL   ++ +RS+K ++++E +N L+RK K +QEE+S L K++ + +++
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

[Close]

BLAST of Moc03g29470 vs. ExPASy Swiss-Prot
Match: Q6R4S6 (Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis OX=93385 GN=CAL PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.3e-35
Identity = 87/194 (44.85%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQVTFSKRR GLLKKA+E+S+LCDAEV+L+VFS  GK +++SS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-MDGTLARY-RSDMGLPQSNHPHSRV---MFWKSEMEEMRRSISSLESRLRHFAGEDLG 120
             M+  L RY R      Q   P S V     W  E   ++  I  LE   RH+ GEDL 
Sbjct: 61  SCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEDLE 120

Query: 121 PLSVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDV 180
            +S+K+L+ LE+QL   ++ +RS+K +++ E +N L+RK K + EE+S L K++ + + +
Sbjct: 121 SISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQIKERESI 180

Query: 181 DVTASRTSLDANAS 190
             T    S   N S
Sbjct: 181 LRTHQNQSEQQNRS 194

[Close]

BLAST of Moc03g29470 vs. ExPASy TrEMBL
Match: A0A6J1C6N3 (truncated transcription factor CAULIFLOWER D-like OS=Momordica charantia OX=3673 GN=LOC111008884 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.7e-104
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK
Sbjct: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS
Sbjct: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180

Query: 181 RTSLDANASSALEMAFQVDGVLI 204
           RTSLDANASSALEMAFQVDGVLI
Sbjct: 181 RTSLDANASSALEMAFQVDGVLI 203

[Close]

BLAST of Moc03g29470 vs. ExPASy TrEMBL
Match: Q9AYR8 (Putative MADS-box protein OS=Cucumis sativus OX=3659 GN=ERAF17 PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.1e-89
Identity = 170/203 (83.74%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDA+VALL+FSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYR+D+GLPQSNHPHSR +FWK+EM++M+RSISS+E+RLRHF GEDL PL+VK
Sbjct: 61  DMDGTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           +LKQLERQ+SVGIER+RSKKRRII+EHIN+LKRKYK +QEEHSRLQKRLNQLKDV VT S
Sbjct: 121 ELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNS 180

Query: 181 RTSLDANASSALEMAFQVDGVLI 204
             + DAN +SALE+ FQVDG+LI
Sbjct: 181 SRNSDANPASALEIEFQVDGLLI 203

[Close]

BLAST of Moc03g29470 vs. ExPASy TrEMBL
Match: A0A6J1KKG0 (MADS-box transcription factor 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495387 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.0e-88
Identity = 172/201 (85.57%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKV+LKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALL+FSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYRSD+GLPQSNHPHSR + WKSEME+M+RSI SL++RLR+FAGEDLGPLS+K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALLWKSEMEDMKRSIISLDARLRNFAGEDLGPLSLK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           +LKQLERQ+S+GIERVRSKKRRI SEH+N LKRKYK +QEEHSRLQKRLNQLKDV VT S
Sbjct: 121 ELKQLERQMSIGIERVRSKKRRITSEHVNQLKRKYKGLQEEHSRLQKRLNQLKDVAVTTS 180

Query: 181 RTSLDANASSALEMAFQVDGV 202
           R S DANA SA EMAFQV+G+
Sbjct: 181 RIS-DANAFSAFEMAFQVNGL 200

[Close]

BLAST of Moc03g29470 vs. ExPASy TrEMBL
Match: A0A6J1E6Y4 (truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 GN=LOC111431347 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.5e-88
Identity = 174/201 (86.57%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGKV+LKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALL+FSPSGKAYQFSSH
Sbjct: 1   MGRGKVQLKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLIFSPSGKAYQFSSH 60

Query: 61  DMDGTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVK 120
           DMDGTLARYRSD+GLPQSNHPHSR + WKSEME+M+RSI SL++RLR+FAGEDLG LS+K
Sbjct: 61  DMDGTLARYRSDVGLPQSNHPHSRALVWKSEMEDMKRSIISLDARLRNFAGEDLGLLSLK 120

Query: 121 DLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTAS 180
           +LKQLERQ+SVGIERVRSKKRRI SEHIN LKRKYK +QEEHSRLQKRLNQLKDV VT S
Sbjct: 121 ELKQLERQMSVGIERVRSKKRRITSEHINQLKRKYKGLQEEHSRLQKRLNQLKDVGVTTS 180

Query: 181 RTSLDANASSALEMAFQVDGV 202
           R S DANA SAL+MAFQVDG+
Sbjct: 181 RIS-DANAFSALDMAFQVDGL 200

[Close]

BLAST of Moc03g29470 vs. ExPASy TrEMBL
Match: Q9M3U2 (Putative transcription factor (Fragment) OS=Cucumis sativus OX=3659 GN=cus3 PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.2e-87
Identity = 167/200 (83.50%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 4   GKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSHDMD 63
           GKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDA+VALL+FSPSGKAYQFSSHDMD
Sbjct: 1   GKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSHDMD 60

Query: 64  GTLARYRSDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVKDLK 123
           GTLARYR+D+GLPQSNHPHSR +FWK+EM++M+RSISS+E+RLRHF GEDL PL+VK+LK
Sbjct: 61  GTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVKELK 120

Query: 124 QLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDVTASRTS 183
           QLERQ+SVGIER+RSKKRRII+EHIN+LKRKYK +QEEHSRLQKRLNQLKDV VT S  +
Sbjct: 121 QLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNSSRN 180

Query: 184 LDANASSALEMAFQVDGVLI 204
            DAN +SALE+ FQVDG+LI
Sbjct: 181 SDANPASALEIEFQVDGLLI 200

[Close]

BLAST of Moc03g29470 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 154.5 bits (389), Expect = 9.4e-38
Identity = 87/180 (48.33%), Postives = 122/180 (67.78%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRG+VELKRIEN  +RQVTFSKRR GLLKKA E+SVLCDAEV+L+VFS  GK +++SS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-MDGTLARY-RSDMGLPQSNHPHSRV---MFWKSEMEEMRRSISSLESRLRHFAGEDLG 120
             M+  L RY R      Q   P S V     W  E   ++  I  LE   RH+ GE+L 
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 PLSVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDV 176
           P+S+KDL+ LE+QL   ++ +RS+K ++++E +N L+RK K +QEE+S L K++ + +++
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

[Close]

BLAST of Moc03g29470 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 148.7 bits (374), Expect = 5.2e-36
Identity = 80/171 (46.78%), Postives = 111/171 (64.91%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           MGRGK+ +KRI N TSRQVTFSKRRNGLLKKA EL++LCDAEV +++FS +G+ Y FSS 
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  DMDGTLARYRSDMGLPQS-NHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSV 120
            M   + RY    G   S N P S + FW+ E   ++R + +L+   R   GE+L  LSV
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLN 171
           + L+ LE QL + +  VR KK +++ E I +L R+   V +E+  L K++N
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVN 171

[Close]

BLAST of Moc03g29470 vs. TAIR 10
Match: AT3G58780.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.8e-36
Identity = 83/196 (42.35%), Postives = 126/196 (64.29%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           +GRGK+E+KRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVAL++FS  G+ Y+++++
Sbjct: 16  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  DMDGTLARYR---SDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPL 120
            + GT+ RY+   SD   P S    +   +++ E  ++RR I  +++  RH  GE LG L
Sbjct: 76  SVRGTIERYKKACSDAVNPPS-VTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSL 135

Query: 121 SVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDV 180
           + K+LK LE +L  GI RVRSKK  ++   I  ++++   +Q  +  L+ ++ +      
Sbjct: 136 NFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAE------ 195

Query: 181 TASRTSLDANASSALE 194
             +R + D   SS ++
Sbjct: 196 -GARLNPDQQESSVIQ 203

[Close]

BLAST of Moc03g29470 vs. TAIR 10
Match: AT2G42830.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 83/195 (42.56%), Postives = 125/195 (64.10%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           +GRGK+E+KRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVAL++FS  G+ Y+++++
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  DMDGTLARYR---SDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPL 120
            + GT+ RY+   SD   P +    +   +++ E  ++RR I  +++  RH  GE LG L
Sbjct: 76  SVRGTIERYKKACSDAVNPPT-ITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSL 135

Query: 121 SVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDV 180
           + K+LK LE +L  GI RVRSKK  ++   I  ++++   +Q ++  L+ ++ +      
Sbjct: 136 NFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITE------ 195

Query: 181 TASRTSLDANASSAL 193
              RT L    SS +
Sbjct: 196 ---RTGLQQQESSVI 200

[Close]

BLAST of Moc03g29470 vs. TAIR 10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 83/195 (42.56%), Postives = 123/195 (63.08%), Query Frame = 0


Query: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSSH 60
           +GRGK+E+KRIEN T+RQVTF KRRNGLLKKAYELSVLCDAEVAL++FS  G+ Y+++++
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  DMDGTLARYR---SDMGLPQSNHPHSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPL 120
            + GT+ RY+   SD   P +    +   +++ E  ++RR I  +++  RH  GE LG L
Sbjct: 76  SVRGTIERYKKACSDAVNPPT-ITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSL 135

Query: 121 SVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRLNQLKDVDV 180
           + K+LK LE +L  GI RVRSKK  ++   I  ++++ K ++ ++  +  R         
Sbjct: 136 NFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRVKEIELQNDNMYLR-------SK 195

Query: 181 TASRTSLDANASSAL 193
              RT L    SS +
Sbjct: 196 ITERTGLQQQESSVI 202

The following BLAST results are available for this feature:

BLAST of Moc03g29470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137440.1	1.6e-103	100.00	truncated transcription factor CAULIFLOWER D-like [Momordica charantia]	[more]
XP_038895204.1	9.0e-91	86.70	truncated transcription factor CAULIFLOWER D-like isoform X1 [Benincasa hispida]	[more]
XP_004145150.1	6.4e-89	83.74	truncated transcription factor CAULIFLOWER D [Cucumis sativus] >KAE8652629.1 hyp...	[more]
XP_023001170.1	4.2e-88	85.57	MADS-box transcription factor 6-like [Cucurbita maxima]	[more]
XP_022923727.1	7.1e-88	86.57	truncated transcription factor CAULIFLOWER D-like [Cucurbita moschata]	[more]

BLAST of Moc03g29470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6EU39	2.4e-38	50.59	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]
Q8LLR1	1.2e-37	44.95	Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=...	[more]
Q7XUN2	6.0e-37	48.02	MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
Q39081	1.3e-36	48.33	Transcription factor CAULIFLOWER OS=Arabidopsis thaliana OX=3702 GN=CAL PE=1 SV=...	[more]
Q6R4S6	3.3e-35	44.85	Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis OX=93385 GN=C...	[more]

BLAST of Moc03g29470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6N3	7.7e-104	100.00	truncated transcription factor CAULIFLOWER D-like OS=Momordica charantia OX=3673...	[more]
Q9AYR8	3.1e-89	83.74	Putative MADS-box protein OS=Cucumis sativus OX=3659 GN=ERAF17 PE=2 SV=1	[more]
A0A6J1KKG0	2.0e-88	85.57	MADS-box transcription factor 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495387...	[more]
A0A6J1E6Y4	3.5e-88	86.57	truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 ...	[more]
Q9M3U2	2.2e-87	83.50	Putative transcription factor (Fragment) OS=Cucumis sativus OX=3659 GN=cus3 PE=2...	[more]

BLAST of Moc03g29470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26310.1	9.4e-38	48.33	K-box region and MADS-box transcription factor family protein	[more]
AT3G57230.1	5.2e-36	46.78	AGAMOUS-like 16	[more]
AT3G58780.1	8.8e-36	42.35	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.1	1.2e-35	42.56	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.2	1.2e-35	42.56	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 148..175
None	No IPR available	COILS	Coil	Coil	coord: 85..112
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..179
None	No IPR available	PANTHER	PTHR48019:SF68	SUBFAMILY NOT NAMED	coord: 1..179
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 56.71 coord: 3..23 score: 68.83 coord: 23..38 score: 86.34
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 8.4E-42 score: 154.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 3.3E-27 score: 93.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 32.604069
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..82 e-value: 1.1E-28 score: 100.8
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..91
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 83..169 e-value: 3.1E-24 score: 85.0
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 85..175 score: 13.742496
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..72 e-value: 4.20109E-41 score: 132.291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g29470.1	Moc03g29470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding