Moc03g29360 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g29360
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein TAPETUM DETERMINANT 1-like
Locationchr3: 20997777 .. 20999570 (-)
RNA-Seq ExpressionMoc03g29360
SyntenyMoc03g29360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAAGACGATCTATCTACTACTACTACTGCTACTCGGCGAGTCTCGGTGATTTTCGCCTCAGTTTTCTTCATCTTCTTTTCGCTGTCTGCGCTCCTTACAGGTCTGAATCATCTCTGGCACTTTATTCTCTGTCGTCCACTGTTTTCTATTTGTTTTTGCTAGGTTTTGATTTGTTGATGCTTATACATCGTCTCTCTGCGGACCTTTCATTTGTCTTCTTCTAGTTTTGTATATTTTATTTGTTTTTCTATCCTTTTCCTCCTTGTTCTCCATCTTCTTTGTCTTCTTATGCTGCATATAGAAACAAAAATGTTTTTCTTATTCTTCTACTTTTTCCATCATCCCTTTCCTCTCATGATTGCAGATCTGGATATTATTGGTTCCTTTATGAACTCCAGTCCCCCGAGTTATCTTCCGCTGGGACTTAACACCACAATAGTTGCTCCTCATCGCAAGCTTCTCCTGACTAGTAAGTTTTTGAAATTTTATTTAATCGAAATTCACTTTTCGAAGAACATTAATGTCAGTAAAAAAATCGCATCGGAGGACTCGAGTTCTGTGTTTGCTGTGTAGATTATTTTGATTTTATTTCGAAGTTATGATCTCGGGGTTGGGGGAAGGGAGAGATTGGATACTCAATTGCCATACATGTTGATTTGGTGTCAGAAGTGCACGCCCGTCCATTCTTAGTAATGGAGCTAAGGCTCAACTTTTGCTAGGTAGCTTTCCAGCCCCCTTCCTCGGCTTTTTAACCTACATGGCCTTTCTGTAGCTGTTTTTGGAGAAATCGTCTTTAATAGATCCCATATGCCCACCGGGTTTTCTTCCTTTTCTGTCCACGATTCATTGATTACATAAAAGCAACCTTTGGCCCGAAAGCCCGGAGCATTATTATGCCTTTCTGAGTATTAGCTTTGTAGCTTCTAATTGATTATATTCATCACCTTTGACGAAGAAGCTCCACCGCTGAGTGTGTATATAAAATTATAATTAAAAGATTACCTGATATGCGTGAACTTCTCTTTAGTGGAATGGCTGAGGAATCATGACACAGCGTTATAAGTTCTATTTTCTAAATTTCGTATGTATACTCTAGATTTTCAATTTTAAAAGTTGTCTTATGTTTAACAAAGTTATTGAAACATTAGAAATGCTCCCGCCGATTTATCTTTTTCAGGGTTTCCCTTTAGCTCCCTCCAGTGCCTTTGAATTTGCTTTATCTTTTAAAATTGATTATTAATTGTGCTTTCTCAACACATCTTTATGACCTCTGAAAGTGTATATTGTGTCTCGGGAGACTTTTTCCCAATTAGTGGGGTTGATATTTATTTGGTGAGAGTAATGTTTGCACGTGGTGATGCCTTGAACAATGCCCAATACACGATTACTAACGGATGACGTCGACCCACCCCCTTTGTTTGTTTGTTTGATTGCGCTTTAGAAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCCACTGGAATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGCGTTACTGGGTGTGACATCTATGGCATTCACTTCAAATGCGGCTGGTTCAGCTCAGCCCACCTCATAAACCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTGGTGAACGACGGCAAGCCTCTGGTCTACGGAGGCACGCTCTCTTTCCAGTATGCCAACACTTTTCCTTACCCGCTTTCAGTCTCCTCAGTTGTCTGCAGCTGA

mRNA sequence

ATGATGAAAGACGATCTATCTACTACTACTACTGCTACTCGGCGAGTCTCGGTGATTTTCGCCTCAGTTTTCTTCATCTTCTTTTCGCTGTCTGCGCTCCTTACAGATCTGGATATTATTGGTTCCTTTATGAACTCCAGTCCCCCGAGTTATCTTCCGCTGGGACTTAACACCACAATAGTTGCTCCTCATCGCAAGCTTCTCCTGACTAAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCCACTGGAATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGCGTTACTGGGTGTGACATCTATGGCATTCACTTCAAATGCGGCTGGTTCAGCTCAGCCCACCTCATAAACCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTGGTGAACGACGGCAAGCCTCTGGTCTACGGAGGCACGCTCTCTTTCCAGTATGCCAACACTTTTCCTTACCCGCTTTCAGTCTCCTCAGTTGTCTGCAGCTGA

Coding sequence (CDS)

ATGATGAAAGACGATCTATCTACTACTACTACTGCTACTCGGCGAGTCTCGGTGATTTTCGCCTCAGTTTTCTTCATCTTCTTTTCGCTGTCTGCGCTCCTTACAGATCTGGATATTATTGGTTCCTTTATGAACTCCAGTCCCCCGAGTTATCTTCCGCTGGGACTTAACACCACAATAGTTGCTCCTCATCGCAAGCTTCTCCTGACTAAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCCACTGGAATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGCGTTACTGGGTGTGACATCTATGGCATTCACTTCAAATGCGGCTGGTTCAGCTCAGCCCACCTCATAAACCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTGGTGAACGACGGCAAGCCTCTGGTCTACGGAGGCACGCTCTCTTTCCAGTATGCCAACACTTTTCCTTACCCGCTTTCAGTCTCCTCAGTTGTCTGCAGCTGA

Protein sequence

MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTIVAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCS
Homology
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BLAST of Moc03g29360 vs. NCBI nr
Match: XP_022137736.1 (protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI
Sbjct: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60

Query: 61  VAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 120
           VAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD
Sbjct: 61  VAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 120

Query: 121 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS 180
           IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS
Sbjct: 121 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS 180

Query: 181 VVCS 185
           VVCS
Sbjct: 181 VVCS 184

[Close]
BLAST of Moc03g29360 vs. NCBI nr
Match: XP_022137731.1 (protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137732.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137733.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137734.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137735.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 371.7 bits (953), Expect = 3.7e-99
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0 

Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI
Sbjct: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60

Query: 61  VAPHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120
           VAPHRKLLLTK ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC
Sbjct: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120

Query: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180
           DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS
Sbjct: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180

Query: 181 SVVCS 185
           SVVCS
Sbjct: 181 SVVCS 185

[Close]
BLAST of Moc03g29360 vs. NCBI nr
Match: XP_022923940.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923942.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923943.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >KAG6584166.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.0 bits (837), Expect = 1.0e-85
Identity = 163/183 (89.07%), Postives = 170/183 (92.90%), Query Frame = 0 

Query: 2   MKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTIV 61
           M  DLST    TRRVSVIFASVFFIFF +SA+LTDLDI  SFM+SSPPS+L LGLN+TI 
Sbjct: 1   MMKDLST----TRRVSVIFASVFFIFFLVSAILTDLDIFHSFMDSSPPSFLRLGLNSTIG 60

Query: 62  APHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 121
           APHRKLLLT+ ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD
Sbjct: 61  APHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 120

Query: 122 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS 181
           IYGIHFKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSS
Sbjct: 121 IYGIHFKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSS 179

Query: 182 VVC 184
           VVC
Sbjct: 181 VVC 179

[Close]
BLAST of Moc03g29360 vs. NCBI nr
Match: KAG7019756.1 (Protein TAPETUM DETERMINANT 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84
Identity = 159/178 (89.33%), Postives = 166/178 (93.26%), Query Frame = 0 

Query: 7   STTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTIVAPHRK 66
           S T    RRVSVIFASVFFIFF +SA+LTDLDI  SFM+SSPPS+L LGLN+TI APHRK
Sbjct: 40  SPTPIPVRRVSVIFASVFFIFFLVSAILTDLDIFHSFMDSSPPSFLRLGLNSTIGAPHRK 99

Query: 67  LLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIH 126
           LLLT+ ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIH
Sbjct: 100 LLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIH 159

Query: 127 FKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 184
           FKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSSVVC
Sbjct: 160 FKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 217

[Close]
BLAST of Moc03g29360 vs. NCBI nr
Match: XP_008439976.1 (PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439984.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439993.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008440012.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >KAA0055349.1 protein TAPETUM DETERMINANT 1 [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.8e-83
Identity = 159/185 (85.95%), Postives = 170/185 (91.89%), Query Frame = 0 

Query: 1   MMKD-DLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTT 60
           MMK+   +TTTT TRRVSVIFA V F+FF LSA+LTD +I    M+SSPPS+LPL LNTT
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60

Query: 61  IVAPHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
            VAPHRKLLLT+ ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSV
Sbjct: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180

Query: 181 SSVVC 184
           SSV+C
Sbjct: 181 SSVLC 181

[Close]
BLAST of Moc03g29360 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-39
Identity = 82/137 (59.85%), Postives = 98/137 (71.53%), Query Frame = 0 

Query: 58  TTIVAP---HRKLLL-------TKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTY 117
           TT  +P   HRK+LL       T+ ++ EP RI GEKC  +DIV+NQ  T P+P GIP Y
Sbjct: 42  TTTSSPSISHRKMLLLSPGTGKTERSV-EPERI-GEKCKSTDIVVNQAVTEPMPNGIPGY 101

Query: 118 TVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQ 177
            VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G TLSF 
Sbjct: 102 MVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFH 161

Query: 178 YANTFPYPLSVSSVVCS 185
           YANTFPY LSV+ V C+
Sbjct: 162 YANTFPYHLSVAFVTCA 176

[Close]
BLAST of Moc03g29360 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.9e-38
Identity = 76/130 (58.46%), Postives = 96/130 (73.85%), Query Frame = 0 

Query: 54  LGLNTTIVAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVN 113
           + +N    A  RKLLL+    +   RI G+ C+K DIV+ QG T PLP+G+P+YTVE+ N
Sbjct: 50  VSINENRTALSRKLLLSPDIGDGTNRI-GQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFN 109

Query: 114 ACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFP 173
           +CV+ C+I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQYAN+F 
Sbjct: 110 SCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFS 169

Query: 174 YPLSVSSVVC 184
           YPLSV+SV C
Sbjct: 170 YPLSVASVSC 178

[Close]
BLAST of Moc03g29360 vs. ExPASy Swiss-Prot
Match: Q2QR54 (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 58/101 (57.43%), Postives = 73/101 (72.28%), Query Frame = 0 

Query: 89  DIVINQGPTAPLPTGIPTYTVEVVNACVTG------CDIYGIHFKCGWFSSAHLINPRVF 148
           DI I QG   PLP+G+P YTV+V+N C  G      C I GIH +CGWFSS  L++PRVF
Sbjct: 119 DIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVF 178

Query: 149 KRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 184
           +RL +DDCL+NDG+PL+ G T+SF+Y N+FPY LSVS   C
Sbjct: 179 RRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]
BLAST of Moc03g29360 vs. ExPASy Swiss-Prot
Match: Q8S6P9 (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.6e-23
Identity = 46/105 (43.81%), Postives = 72/105 (68.57%), Query Frame = 0 

Query: 79  RIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLIN 138
           R+  + C++ ++V+ Q     LP+GIPTY+VE++N C T C +Y +H  CG F+SA L++
Sbjct: 65  RMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCGEFASAELVD 124

Query: 139 PRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 184
           P  F+R+ ++DCLV  G  L     +SFQY+N+F YPL+V++V C
Sbjct: 125 PSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]
BLAST of Moc03g29360 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 9.3e-05
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0 

Query: 107 YTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 166
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 167 SFQYANTFPYPL 177
           SF Y+NT  + L
Sbjct: 108 SFNYSNTHQFAL 117

[Close]
BLAST of Moc03g29360 vs. ExPASy TrEMBL
Match: A0A6J1C7I8 (protein TAPETUM DETERMINANT 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 7.2e-101
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI
Sbjct: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60

Query: 61  VAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 120
           VAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD
Sbjct: 61  VAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 120

Query: 121 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS 180
           IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS
Sbjct: 121 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS 180

Query: 181 VVCS 185
           VVCS
Sbjct: 181 VVCS 184

[Close]
BLAST of Moc03g29360 vs. ExPASy TrEMBL
Match: A0A6J1C840 (protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0 

Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI
Sbjct: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60

Query: 61  VAPHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120
           VAPHRKLLLTK ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC
Sbjct: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120

Query: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180
           DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS
Sbjct: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180

Query: 181 SVVCS 185
           SVVCS
Sbjct: 181 SVVCS 185

[Close]
BLAST of Moc03g29360 vs. ExPASy TrEMBL
Match: A0A6J1EDD3 (protein TAPETUM DETERMINANT 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431507 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.0e-86
Identity = 163/183 (89.07%), Postives = 170/183 (92.90%), Query Frame = 0 

Query: 2   MKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTIV 61
           M  DLST    TRRVSVIFASVFFIFF +SA+LTDLDI  SFM+SSPPS+L LGLN+TI 
Sbjct: 1   MMKDLST----TRRVSVIFASVFFIFFLVSAILTDLDIFHSFMDSSPPSFLRLGLNSTIG 60

Query: 62  APHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 121
           APHRKLLLT+ ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD
Sbjct: 61  APHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCD 120

Query: 122 IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSS 181
           IYGIHFKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSS
Sbjct: 121 IYGIHFKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSS 179

Query: 182 VVC 184
           VVC
Sbjct: 181 VVC 179

[Close]
BLAST of Moc03g29360 vs. ExPASy TrEMBL
Match: A0A1S3B0P8 (protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 159/185 (85.95%), Postives = 170/185 (91.89%), Query Frame = 0 

Query: 1   MMKD-DLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTT 60
           MMK+   +TTTT TRRVSVIFA V F+FF LSA+LTD +I    M+SSPPS+LPL LNTT
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60

Query: 61  IVAPHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
            VAPHRKLLLT+ ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSV
Sbjct: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180

Query: 181 SSVVC 184
           SSV+C
Sbjct: 181 SSVLC 181

[Close]
BLAST of Moc03g29360 vs. ExPASy TrEMBL
Match: A0A5A7UPF3 (Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001940 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 159/185 (85.95%), Postives = 170/185 (91.89%), Query Frame = 0 

Query: 1   MMKD-DLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTT 60
           MMK+   +TTTT TRRVSVIFA V F+FF LSA+LTD +I    M+SSPPS+LPL LNTT
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60

Query: 61  IVAPHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
            VAPHRKLLLT+ ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSV
Sbjct: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180

Query: 181 SSVVC 184
           SSV+C
Sbjct: 181 SSVLC 181

[Close]
BLAST of Moc03g29360 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-40
Identity = 82/137 (59.85%), Postives = 98/137 (71.53%), Query Frame = 0 

Query: 58  TTIVAP---HRKLLL-------TKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTY 117
           TT  +P   HRK+LL       T+ ++ EP RI GEKC  +DIV+NQ  T P+P GIP Y
Sbjct: 42  TTTSSPSISHRKMLLLSPGTGKTERSV-EPERI-GEKCKSTDIVVNQAVTEPMPNGIPGY 101

Query: 118 TVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQ 177
            VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G TLSF 
Sbjct: 102 MVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFH 161

Query: 178 YANTFPYPLSVSSVVCS 185
           YANTFPY LSV+ V C+
Sbjct: 162 YANTFPYHLSVAFVTCA 176

[Close]
BLAST of Moc03g29360 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-39
Identity = 76/130 (58.46%), Postives = 96/130 (73.85%), Query Frame = 0 

Query: 54  LGLNTTIVAPHRKLLLTKATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVN 113
           + +N    A  RKLLL+    +   RI G+ C+K DIV+ QG T PLP+G+P+YTVE+ N
Sbjct: 50  VSINENRTALSRKLLLSPDIGDGTNRI-GQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFN 109

Query: 114 ACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFP 173
           +CV+ C+I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQYAN+F 
Sbjct: 110 SCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFS 169

Query: 174 YPLSVSSVVC 184
           YPLSV+SV C
Sbjct: 170 YPLSVASVSC 178

[Close]
BLAST of Moc03g29360 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 48.5 bits (114), Expect = 6.6e-06
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0 

Query: 107 YTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 166
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 167 SFQYANTFPYPL 177
           SF Y+NT  + L
Sbjct: 108 SFNYSNTHQFAL 117

The following BLAST results are available for this feature:
BLAST of Moc03g29360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022137736.11.5e-100100.00protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia][more]
XP_022137731.13.7e-9999.46protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_02213773... [more]
XP_022923940.11.0e-8589.07protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein ... [more]
KAG7019756.11.5e-8489.33Protein TAPETUM DETERMINANT 1 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_008439976.12.8e-8385.95PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439984.1 PREDICTE... [more]
BLAST of Moc03g29360 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6TLJ22.6e-3959.85Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1[more]
Q1G3T12.9e-3858.46TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1[more]
Q2QR541.4e-2957.43TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S... [more]
Q8S6P92.6e-2343.81TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S... [more]
A8MS789.3e-0538.89Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P... [more]
BLAST of Moc03g29360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C7I87.2e-101100.00protein TAPETUM DETERMINANT 1-like isoform X2 OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1C8401.8e-9999.46protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1EDD35.0e-8689.07protein TAPETUM DETERMINANT 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431507... [more]
A0A1S3B0P81.4e-8385.95protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1[more]
A0A5A7UPF31.4e-8385.95Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
BLAST of Moc03g29360 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G24972.11.8e-4059.85tapetum determinant 1 [more]
AT1G32583.12.0e-3958.46FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT1G05835.16.6e-0638.89PHD finger protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33184:SF67PROTEIN TAPETUM DETERMINANT 1coord: 14..184
IPR040361Tapetum determinant 1PANTHERPTHR33184PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATEDcoord: 14..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g29360.1Moc03g29360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001709 cell fate determination
cellular_component GO:0016021 integral component of membrane