Moc03g28930 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g28930
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrotran_gag_3 domain-containing protein
Location	chr3: 20723827 .. 20730405 (+)
RNA-Seq Expression	Moc03g28930
Synteny	Moc03g28930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTACAAACAGGCTTTCTACAATTGCTTGCCGAAATGGGGCAACTGCAAAATCAAATTCAAGAACGCCTAGGAGTGTTAGAACACTGGATCCTGTCCTGAAAGAAGCGCGCATTCGCGATGCCAGAAAGCGTATCGACGATTTGGAGGGGAGGCAGCAAGCGCTGCGGGCGAAGCAGCAAGCACTCTATTTCATGTTTCTTCAACAAATGTTGGATTGATAGAAAGGTTGGTTTGACTAAACCGAAAAAACAGATGTATAGTTTTGCTCAAAACAAAATTTGAAGAGGTAGATATTCTACGCAGACAGATATCTTAATTGGTAGCATCTCTTCAGATTATTACGATATGATTCATCCTAATCAATGTCTTATAGTTTTAACTCTCTTTTTTTCAACCAGACATTACATTTGATCTTTTCAAATGGAAACAAAGTTTAGCATGGACAAGGAGATAAAAGATATACAACTTTACACGCGTTTGGCCATGGAAATCATCAGCAACAATTAGCTGCTAGTTGGAATAATGTTATTATTTAAACCTAATGTCTCATTCGTGTGCAACAGTCACATTCTTCTGTATCATCAGGAGAGGGGACTCCGATTCTTATTTAGCTTTTTGGAGTGCTCACCATTCTGATTATTAGTATTTTTTTCTTTCACTGAAAAGATGTGTTGGTACAATGCATATTGAGATAGATCTTTTTTTTATGCCATGTATAAGAAGAGTAAAGATGTTAAGGATCCCAATCTGTAAAGATAAGAGATCTTACAAAAGTTTATAATAGACATATATTATTTCATTGATATTGTCAATTAGTTTTGAGGAAGAATTCCATGAATATTGTGAATCGAAAATTGCAAAAACTATGTAAGCAACCAGCTAAGAGAGCTTTCTGACAATTGTATATATATTTATTTGTTTGAAGCACAAATTATCTATGGTAGTTTGCAAGATTTAAGATCTTGAATTCCTAATGTTTTACTACCTGAAGTCTTTACCTTGGTTACCTCCTTTTCCAAATATCAAACTCTTCGTTCTATGTAATTACTCCATATATTATAGAATCCACTCAACACCATAGGACCAGTTCACAATGCACTAGTATTTTATTCTGTTAAAGGAGTTTTCGATAACTCAATAGCTTTGTCTTTTAGTGTTTTGGGTCCATGCTTAGGCTTTTTTTTCCATTCCAGTACTGAATCATTAACAGCTCTTTTCTCTGTTTTTTTTTCCTTGTTCTCTTTGAACTATTAGGAGTAGTTACTTAGTTAGATATTAGTTAAAGTAACTAATTTCTCATTACTGTTGTATGACCTATATATATGACTACTTGTTGATAATTAATATTAAGCAAGATCTTTAAGTTACTCTCAGAACGTAATATGGTATCAGAGGATTTTTTTTTTTCTGAGAGTCTGGCGGTTACTTTTTCAAGAAATTTTCTTGATTTTCTCGCCATCTTGCTTCTGCCATGACTGAAGAGGACTTCGTCAATCCTACAGCAAATCTTTCTTCTCCATCTTTTGTTCAAACATCCCTTGAACAGTATATGAATCCTTACTTTCTTCATCATTCTGACAGCACTAGCCTTGTTCTAGTTTCAGATTTGCTTAATGATGAAAATTACACTACCTGGAGCAGATCGATGAAGATAGCCCTAACTGTGAAAAACAAATTCGGCTTCGTTGATGGATCAATTCCACGTCCCGATGATGAACATCTCAATTCTTGGATCATTTGCAACAACGTCGTCATTGCATGGATCTTGAACTCTCTTTCGAAAGAGATATCAGCTAGTGTCCTGTTCGCCGATTCTGCAAGAGAAATTTGGTTAGATCTACAAGAACGATTTTAACGACAAAATCGACCTCGAATTTTTCAGCTCCGCCGTGATTTATCTACATTAGTTCAAGATCAGTTATCTGTAAGTGCCTATTTTACGAAATTGAAGACATTATGGACTGAACTTGCTGCATATCGTCCTAATTGTTCTTGCGGTCGCTGCACTTGTGGAGGTGTCAAGTCTCTTGTTGAATATTTTCAGACTGAGTACGTGATGTGTTTCCTCATGGGCTTGAACGATTCTTTCAGCCAAATTCGTGCTCAGCTACTCCTTATGGAACCTCCTCCGACGATCAATCGTGCCTTTGCTTTAATTGCTCAAGAAGTTCAGCAAAGAGTTATTTCGCAGATCTCTCCTGCTAATTCTTCTGCTTCGTCTACAGCCTTCATGGTCCGCGGCACTCAGAATTCGAATTCCTCGAATTTGTCAAATTCGTCGACTTCTTCGAATCGCTCTCTGTCAAATCAGGGCAAGCGAAAAGAAAAATCGATGTGTACTCATTGCGGCCTTTTAAGCCACACTGTGGATCGTTGCTATAAACTCCACGGGTATCCTCCGGGATACCGCAATTCCAATGCTCGAGGTACACATCCATCACCTGCTCCAGCCAAATCTGCTGATGCTACTTCTAAGAATACGGCTGCTATTCCGGATTCTTTATCACATATCAATGCTGATCAATGTCAGGGATTATAAGCAATTCTTCAGTCTCATCTTGCCAAAGTCAAGACTGGTTCAGAGTCTGAGTCTGGTACATCCCATGTTGCAGGTACTTGTTTTCATTCTCTGAATATTCATGGCAGTTCTCTACATCAGTGGGTTATTGATTATGGGGCTTCCACTCACGTATGTTATTCTCGAGAATTATTTTCTAGTATGAAACCAGTATCTGAAGTTCATGTATCTTTGTCTGATCATTCTCGAGTTTCTGTTGAGTTTATTGGAGATGTACAGTTGACTGATCAGATTATTCTACAGAATGTCTTATTTGTTCCCCAATTTCGGTTTAACCTGGTTTCAGTCAGTGCCTTAACAAGAGATTCTTCTCTACTGGTTAATTTTTTTGGTGATTCTTGTTTCATTCAGGACAAGTACTCTTTGAGGACGATTGGCAAGGGTAGTTCTTGGCAAGGTCTCTACTTATTTTCTGCTGCATCGACTCCTATCACCAAAACTGTATGTACTGCCCACTTGCCTAATCATCGTATTTGGCATCAACGTCTTGGACACCCTTCCTCTAAACATCTTACTGTTTTAAAAGATTTTTTACATTTGGATTCATGTATGTCTTCTCACGATCCTTGTCTTGTATGTCCTTTGGCCAAACAACGTCGATTGTCTTTTGTGTCTCGTAATAAACTTGCTGAGAGTTCTTTTGATCTTCTGCATTGTGATACATGGGGTCTCTATCGGTCTCCTACTTATAATGGCTATCGGTATTTTCTTACCCTTGTGGATGATTATTCTCGATTTACATGGGTTTTCATGATGCGCCAAAAATCTGATGCCTTAAGAATAATTCCTCAATTTTTCAAGTATGTTGAAACACAATTTGAGAAAACTATAAAGCAGTTCAGATCTGATAATGCTCCAGAATTATCATTCACTGATTTTTTTCTTTCAAAGGGTGTTCTTCACCAATATTCATGTGTCGAAAGACCTGAGCAGAATTCAGTTGTAGAACGGAAACACCAACATTTACTTAATGTTGCTCGATCATTGTATTTTCAGTCACATATGCCTATTACGTTCTGGGGGGATTGCATTCTAACTGCTTGTTATTTGATCAATCGCACTCCTTCTTCCATTATTGATTGGCACACACCGTTTTCTCGGTTATATGGCAAAGAAGCTGATTATTCTATGCTGCGTACTTTTGGCTATTTATGTTTTGCATCAACCATTCCATCTCATCGGTCCAAGTTTCATCCAAGGGCCATTTCGTCTGTTTTTGTTGGATATCCACCAAGTGTTAAGGGGTATCGATTATTTGATATTGAAAACAAGAGGTTTTTTGTTTCACGGGACGTTATCTTTCATGAAGATATGTTTCCTTTCAGTTCAATTCCATTAAAGGATGATTCTGTTGATCCATTTCCAGATTGTGTTTTACCAAAGGCTTTTGATTTTTCTGGTATACCTGCTATTTCTCTTACAGATTCTTCGGGCCCCACTACTAATGTTGATCAAAATATTGTTTCACAGCCGCCAGTTTCTGCTTCACATGTTTTTATGGATGAATTTGTCCCAGATGTAGTTCATACTGATTCTGTTGTGGATGAGAGTCTTACAACCTTTGTTACTCCTACTGATACCTCAACTGCCAATGATGTTATTGTTTCTTCATCTGCTATTGCCCCTATTCGCAAGTCTCAACGTGTTTCCCGACCACCCACCTATCTTAAAGACTATCATTGTAGTCTTCTTCATTCCACAGTCTTACCAGATATCAAGACTCGATATCCTTTACAAAAGTTTTTATCTTATGAGAAATTGTCTCCTTCCTATAGACAATTTATTCTGAATATTTCTACTGACTTTGAACCTCAGTTTTATCACCAGGCTGTCCCGTTTGCTCATTGGCATACTGTTATGCATGAGGAATTACAAGCCATGGAAGCCAATCAAACATGGGCTGTTGTTCCTTTACCATCCGGACAACACTCTATTGGATGTAAGTGGGTCTACAAAATTAAACACCGGTCTGATGGAACTATTGAAAGATATAAGGCCCGGTTGGTTGCTAAAGGTTATACCCAACAAGAAGGTATCGATTATATAGAGATCTTTTCACCTGTTGCAAAACTTGTTACTGTCAAGGTGTTACTTACTATCGCTGTCTCTTTAAATTGGCCTTTAGTCCAACTTGATGTGAATAACGCTTTTCTTAATGGTGATCTTTTCGAAGAGGTGTATATGGATCTCCCATTAGGATATAAGCATACTGTCACAGCAACTAAGGGCGAGCGTCTGGTATGTCGCCTTCACAAATCGATTTATGGGCTTAAACAGGCTTCGAGGCAGTGGTTTGATAAGTTTTCTCATACCTTATTGCTTATGGGTTTCAAACAAGCTAAATCTGATTATTCGTTATTTGTTCGGGACAGTGGTTCTTCCTTTGTCGCTCTTTTGGTCTATGTAGATGACATCATCATAACCGGTGCATCTTCTTCTGTTATTGATGCTTTAAAGACTCATCTACATACTGTTTTTAAGTTGAAAGACTTAGGCCATTTGAGATATTTTTTGGGCTTGGAGTTAGCAAGGTCCTCTGCTGGAATTTTCTTGTCCCAACGGAAATATACTTTACAATTACTTAAAGACACTGGTTTTTTAGCTTGCAAACCCTCTGTTTTGCCCATGGATCCTCATGTTAAGTTGAGTGCTACTGCTGGTTCTTTATTGCCTGATGCTACTGTCTATAGGCGTCTCATTGGTAGACTTCTCTACCTTACGGTTTCAAGGTCGGATATCACCTTTGCAGTACACAAACTCAGTCAATTTGTGTCTCAACCTCGTCAGTTTCATCTTGATGCAGTTCATTATTTACTTCGGTATCTCAAGGCTTCGCCGGGTCAAGGCATTATGTTGAAGTGTTCTTCATCCTTTCAGCTTCGAGCTTTTTCGGACGCCGATTGGGCTTCATGCTTAGATTCCCGTAAGTCCACTACTGGTTTCTGTATTTTCTTAGGTGACTCCCTTGTATCATGGAAGGCCAAGAAACAGAACATCGTCTCTCGGTCCTCTGCTGAGGCTGAATATCGAGCACTTGCAGCTACTACCGGCGAACTTGTTTGGCTGAATCATCTTTTGGCTGACTTCCAGGTTTCTTCTTCTTCCCCAGCTCTTTTGTTTTGTGACAATGAGGCTGCCATTCACATTGCCACTAATCCTATGTTTCATGAGAGGACCAAACATATTGAGTTGGATTGCCATTTCGTACGAGACAAAGTATCAGCTGGGTTGATTAAACTGCTCCCTGTGCGTTCGGATCTTCAACTTGCTGACATTTTTACTAAGGCTGTTTCTACTCCTTCTTTTTCTCATTTGTTATCCAAGATGGGTGTATCAAATCTTCTCCTTCCATCTTGAGGGGGAGTATTAGGAGTAGTTACTTAGTTAGATATTAGTTAAAGTAACTAATTTCTTATGGCCTATATATATGGCTACCTGTTGATAATTAATATTAAGCAAGATCTTTAAGTTACTCTCAAAACGTAATATGAACGACATGAGTTATCAATACAAATAAGGTCCAAAACATAAACATTACAACAATGTTTCTTAAACCAATGATGTTTCTTAAATTTTACATAACAAACTAGCAGCAGCCTACACACGTACTGTCCTCTCTTGCAATGCTGTCAATACCATTATAGCAGCAACCATTAATGCAGACAACACAGTAACAATTGATGCAAACAAGCCAAGATGAGAGCTACACTTGCTCCATGACTCTTTTGCTAAATTCATGTCTGATATCCCTTAATTTATCACGGACTTGTTTAACTTCCTTATAAAAATAAAAAAGAAATAAAAAAAAAAGCTATGAGTAAGGATATGCTCTCATTACCATTAAATACTTTCTTAAGAAACAAAGAATCTTAGAAAAGAGAGGAGAAAATTCTTTATTTGTTGCCGTCGGAGATAGGTTCATTCTCTCATTTATCTTTTTCTTTTTCTCTCATTCTACTTTTTGTGCAGACTACATAATAGCTGGGTTGCATAG

mRNA sequence

ATGGATGCTACAAACAGGCTTTCTACAATTGCTTGCCGAAATGGGGCAACTGCAAAATCAAATTCAAGAACGCCTAGGAGTGTTAGAACACTGGATCCTGTCCTGAAAGAAGCGCGCATTCGCGATGCCAGAAAGCGTATCGACGATTTGGAGGGGAGGCAGCAAGCGCTGCGGGCGAAGCAGCAAGCACTCTATTTCATGTTTCTTCAACAAATTGCCTATTTTACGAAATTGAAGACATTATGGACTGAACTTGCTGCATATCGTCCTAATTGTTCTTGCGGTCGCTGCACTTGTGGAGGTGTCAAGTCTCTTGTTGAATATTTTCAGACTGAGTACGTGATGTGTTTCCTCATGGGCTTGAACGATTCTTTCAGCCAAATTCGTGCTCAGCTACTCCTTATGGAACCTCCTCCGACGATCAATCGTGCCTTTGCTTTAATTGCTCAAGAAGTTCAGCAAAGAGTTATTTCGCAGATCTCTCCTGCTAATTCTTCTGCTTCGTCTACAGCCTTCATGGTCCGCGGCACTCAGAATTCGAATTCCTCGAATTTGTCAAATTCGTCGACTTCTTCGAATCGCTCTCTGTCAAATCAGGGCAAGCGAAAAGAAAAATCGATGTGTACTCATTGCGGCCTTTTAAGCCACACTGTGGATCGTTGCTATAAACTCCACGGGTATCCTCCGGGATACCGCAATTCCAATGCTCGAGGTACACATCCATCACCTGCTCCAGCCAAATCTGCTGATGCTACTTCTAAGAATACGGCTGCTATTCCGGATTCTTTATCACATATCAATGCTGATCAATATTCTTCGGGCCCCACTACTAATGTTGATCAAAATATTGTTTCACAGCCGCCAGTTTCTGCTTCACATGTTTTTATGGATGAATTTGTCCCAGATGTAGTTCATACTGATTCTGTTGTGGATGAGAGTCTTACAACCTTTGTTACTCCTACTGATACCTCAACTGCCAATGATGTTATTGTTTCTTCATCTGCTATTGCCCCTATTCGCAAACTACATAATAGCTGGGTTGCATAG

Coding sequence (CDS)

ATGGATGCTACAAACAGGCTTTCTACAATTGCTTGCCGAAATGGGGCAACTGCAAAATCAAATTCAAGAACGCCTAGGAGTGTTAGAACACTGGATCCTGTCCTGAAAGAAGCGCGCATTCGCGATGCCAGAAAGCGTATCGACGATTTGGAGGGGAGGCAGCAAGCGCTGCGGGCGAAGCAGCAAGCACTCTATTTCATGTTTCTTCAACAAATTGCCTATTTTACGAAATTGAAGACATTATGGACTGAACTTGCTGCATATCGTCCTAATTGTTCTTGCGGTCGCTGCACTTGTGGAGGTGTCAAGTCTCTTGTTGAATATTTTCAGACTGAGTACGTGATGTGTTTCCTCATGGGCTTGAACGATTCTTTCAGCCAAATTCGTGCTCAGCTACTCCTTATGGAACCTCCTCCGACGATCAATCGTGCCTTTGCTTTAATTGCTCAAGAAGTTCAGCAAAGAGTTATTTCGCAGATCTCTCCTGCTAATTCTTCTGCTTCGTCTACAGCCTTCATGGTCCGCGGCACTCAGAATTCGAATTCCTCGAATTTGTCAAATTCGTCGACTTCTTCGAATCGCTCTCTGTCAAATCAGGGCAAGCGAAAAGAAAAATCGATGTGTACTCATTGCGGCCTTTTAAGCCACACTGTGGATCGTTGCTATAAACTCCACGGGTATCCTCCGGGATACCGCAATTCCAATGCTCGAGGTACACATCCATCACCTGCTCCAGCCAAATCTGCTGATGCTACTTCTAAGAATACGGCTGCTATTCCGGATTCTTTATCACATATCAATGCTGATCAATATTCTTCGGGCCCCACTACTAATGTTGATCAAAATATTGTTTCACAGCCGCCAGTTTCTGCTTCACATGTTTTTATGGATGAATTTGTCCCAGATGTAGTTCATACTGATTCTGTTGTGGATGAGAGTCTTACAACCTTTGTTACTCCTACTGATACCTCAACTGCCAATGATGTTATTGTTTCTTCATCTGCTATTGCCCCTATTCGCAAACTACATAATAGCTGGGTTGCATAG

Protein sequence

MDATNRLSTIACRNGATAKSNSRTPRSVRTLDPVLKEARIRDARKRIDDLEGRQQALRAKQQALYFMFLQQIAYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAQLLLMEPPPTINRAFALIAQEVQQRVISQISPANSSASSTAFMVRGTQNSNSSNLSNSSTSSNRSLSNQGKRKEKSMCTHCGLLSHTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADATSKNTAAIPDSLSHINADQYSSGPTTNVDQNIVSQPPVSASHVFMDEFVPDVVHTDSVVDESLTTFVTPTDTSTANDVIVSSSAIAPIRKLHNSWVA

Homology

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BLAST of Moc03g28930 vs. NCBI nr
Match: XP_022148562.1 (uncharacterized protein LOC111017196 [Momordica charantia])

HSP 1 Score: 358.2 bits (918), Expect = 7.9e-95
Identity = 186/198 (93.94%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 73  AYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAQL 132
           AYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRA L
Sbjct: 96  AYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAXL 155

Query: 133 LLMEPPPTINRAFALIAQEVQQRVISQISPANSSASSTAFMVRGTQNSNSSNLSNSSTSS 192
           LLM PPPTIN AF LIAQEVQQR IS IS ANSSASSTAF V GTQN NSSNLSNSSTSS
Sbjct: 156 LLMXPPPTINXAFXLIAQEVQQRXISXISXANSSASSTAFXVXGTQNXNSSNLSNSSTSS 215

Query: 193 NRSLSNQGKRKEKSMCTHCGLLSHTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADAT 252
           NRSLSNQGKRKEKSMCTHC LL HTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADAT
Sbjct: 216 NRSLSNQGKRKEKSMCTHCXLLXHTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADAT 275

Query: 253 SKNTAAIPDSLSHINADQ 271
           SKNTAAIPDSLSHINADQ
Sbjct: 276 SKNTAAIPDSLSHINADQ 293

[Close]

BLAST of Moc03g28930 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia])

HSP 1 Score: 213.4 bits (542), Expect = 3.1e-51
Identity = 132/240 (55.00%), Postives = 159/240 (66.25%), Query Frame = 0


Query: 35  LKEARIRDARKRIDDLEGRQQALRAKQQALYFMFLQQIAYFTKLKTLWTELAAYRPNCSC 94
           LKE   R  R RI  L      L   Q       L   AYFT+LKTLW+ELA YRP CSC
Sbjct: 122 LKERFQRQNRPRIFQLRRELSNLTQDQ-------LSVTAYFTRLKTLWSELALYRPACSC 181

Query: 95  GRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAQLLLMEPPPTINRAFALIAQEVQQ 154
           GRC+ GGVKS+  ++Q EYVM FLMGLN SFSQIRAQLLLMEP PTINRAFAL+AQE+QQ
Sbjct: 182 GRCSYGGVKSIEAHYQQEYVMAFLMGLNVSFSQIRAQLLLMEPAPTINRAFALVAQEMQQ 241

Query: 155 RVISQISPANSSASSTAFMVRGTQNSNSSNLSNSSTSSNRSLSNQGKRKEKSMCTHCGLL 214
           R IS      S  S TA  VR T NS++S L++SS S         KRK+KS+CTHCG+ 
Sbjct: 242 RSIS----LPSVTSPTASAVRATSNSSNSRLNSSSAS-------HMKRKDKSLCTHCGIY 301

Query: 215 SHTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADATSKNTAAIP----DSLSHINADQ 271
            HTVD+CYKLH YPPGYR+S  + T  +   ++SA+A SK+ +A P    +SL+ + ADQ
Sbjct: 302 GHTVDKCYKLHEYPPGYRSSVHKTTSSNATSSRSAEAPSKSVSATPSGISNSLATLTADQ 343

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BLAST of Moc03g28930 vs. NCBI nr
Match: XP_022158736.1 (uncharacterized protein LOC111025199 [Momordica charantia])

HSP 1 Score: 192.6 bits (488), Expect = 5.7e-45
Identity = 100/156 (64.10%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 73  AYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAQL 132
           AYFT+LKTLWTELA+Y  +C+C +C+CGGVK++ EYFQ EYVMCFLMGLNDSFSQIRAQL
Sbjct: 54  AYFTQLKTLWTELASYYSSCTCSKCSCGGVKAIGEYFQMEYVMCFLMGLNDSFSQIRAQL 113

Query: 133 LLMEPPPTINRAFALIAQEVQQRVISQISPANSSASSTAFMVRGTQNSNSSNLSNSSTSS 192
           LLMEP P+IN AFALIAQEVQQ  IS  S AN    +TAF+ R +  ++  + S+S    
Sbjct: 114 LLMEPAPSINWAFALIAQEVQQCAISSPSLAN----ATAFLARASSPAHGPHSSSS---- 173

Query: 193 NRSLSNQGKRKEKSMCTHCGLLSHTVDRCYKLHGYP 229
               S+Q K+KEK++CTHCG++ H VDRCYKLHGYP
Sbjct: 174 ----SSQYKKKEKTVCTHCGIVGHMVDRCYKLHGYP 197

[Close]

BLAST of Moc03g28930 vs. NCBI nr
Match: XP_038904477.1 (uncharacterized protein LOC120090845 [Benincasa hispida])

HSP 1 Score: 185.7 bits (470), Expect = 7.0e-43
Identity = 108/224 (48.21%), Postives = 143/224 (63.84%), Query Frame = 0


Query: 35  LKEARIRDARKRIDDLEGRQQALRAKQQALYFMFLQQIAYFTKLKTLWTELAAYRPNCSC 94
           L+E   R  R R+  L      L   Q ++         Y+ KLKTLW EL +YRP+CSC
Sbjct: 65  LQERYQRKNRPRVFQLRRENSNLSQNQDSI-------TTYYAKLKTLWNELISYRPSCSC 124

Query: 95  GRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAQLLLMEPPPTINRAFALIAQEVQQ 154
           G+CTCGGVK+L  YFQTEYV+ FLMGLNDS + IR+QLLLMEP PTINRAF+L+AQE+ Q
Sbjct: 125 GKCTCGGVKNLQTYFQTEYVIAFLMGLNDSSAPIRSQLLLMEPKPTINRAFSLVAQEIDQ 184

Query: 155 RVI-SQISPANSSASSTAFMVRGTQNSNSSNLSNSSTSSNRSLSNQGKRKEKSMCTHCGL 214
           +   S    A SS+++TA +V+     N S+ S+ +  S    +NQ K+K++ +CTHC +
Sbjct: 185 KAYSSSFGNAISSSNATALLVK-----NGSSASHQTVPSYSHNTNQNKKKDRPICTHCDI 244

Query: 215 LSHTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADATSKNTA 258
             HTVDRCYKLHGYPPG++        P  A A  +D+ S  T+
Sbjct: 245 QGHTVDRCYKLHGYPPGHKFYKP----PESARAYHSDSLSSLTS 272

[Close]

BLAST of Moc03g28930 vs. NCBI nr
Match: KAA8517066.1 (hypothetical protein F0562_017116 [Nyssa sinensis])

HSP 1 Score: 181.0 bits (458), Expect = 1.7e-41
Identity = 123/319 (38.56%), Postives = 181/319 (56.74%), Query Frame = 0


Query: 46  RIDDLEGRQQALRAKQQALYFMFLQQIAYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSL 105
           RI  L+     LR +Q ++         YFTKLKT+W EL+ YRPNCSCG+C+CGGVK+L
Sbjct: 93  RIFQLKRELMNLRQEQSSVSI-------YFTKLKTIWEELSNYRPNCSCGKCSCGGVKNL 152

Query: 106 VEYFQTEYVMCFLMGLNDSFSQIRAQLLLMEPPPTINRAFALIAQEVQQRVISQISPANS 165
             + Q EY+M FLM L+DSFSQ+R QLLLM+P P INR F+LI QE QQR  +  S +++
Sbjct: 153 NNHHQMEYIMSFLMELDDSFSQVRGQLLLMDPIPPINRVFSLIVQEEQQRRTNPSSDSSN 212

Query: 166 SASSTAFMVRGTQNSNSSNLSNSSTSSNRSLSNQGKRKEKSMCTHCGLLSHTVDRCYKLH 225
           S S+ AF V+     +  + S SS SS    +++ +++++  CTHC +L HTVDRCYK+H
Sbjct: 213 STSTMAFAVKTDFTKSGGSGSQSSNSS----ASKNQKRDRPYCTHCKILGHTVDRCYKIH 272

Query: 226 GYPPGYRNSNARGTHPSPAPAKSADATSKNTAAIPDSLSHINADQY------------SS 285
           GYPPGY+  +   ++ +     ++D  S  + +    + ++N++QY            +S
Sbjct: 273 GYPPGYKFRSNNNSNAAAHQVSTSDDRSDQSNSFGGFVQNLNSNQYQQLMSMLSTHLSNS 332

Query: 286 GPTTN----------VDQNIVSQPPVSASHVFMD-EFVPDVVHTDSVVDESLTTFV---T 339
              TN           DQ I S P +   H  +   F+PD+  +  V D  +T+ V    
Sbjct: 333 AKVTNALDPSQTNCLADQVIDSFPDLVLPHSSLQAHFIPDLA-SSHVHDPPVTSGVPADL 392

[Close]

BLAST of Moc03g28930 vs. ExPASy TrEMBL
Match: A0A6J1D5E3 (uncharacterized protein LOC111017196 OS=Momordica charantia OX=3673 GN=LOC111017196 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 3.8e-95
Identity = 186/198 (93.94%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 73  AYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAQL 132
           AYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRA L
Sbjct: 96  AYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAXL 155

Query: 133 LLMEPPPTINRAFALIAQEVQQRVISQISPANSSASSTAFMVRGTQNSNSSNLSNSSTSS 192
           LLM PPPTIN AF LIAQEVQQR IS IS ANSSASSTAF V GTQN NSSNLSNSSTSS
Sbjct: 156 LLMXPPPTINXAFXLIAQEVQQRXISXISXANSSASSTAFXVXGTQNXNSSNLSNSSTSS 215

Query: 193 NRSLSNQGKRKEKSMCTHCGLLSHTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADAT 252
           NRSLSNQGKRKEKSMCTHC LL HTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADAT
Sbjct: 216 NRSLSNQGKRKEKSMCTHCXLLXHTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADAT 275

Query: 253 SKNTAAIPDSLSHINADQ 271
           SKNTAAIPDSLSHINADQ
Sbjct: 276 SKNTAAIPDSLSHINADQ 293

[Close]

BLAST of Moc03g28930 vs. ExPASy TrEMBL
Match: A0A6J1DNP7 (uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022065 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51
Identity = 132/240 (55.00%), Postives = 159/240 (66.25%), Query Frame = 0


Query: 35  LKEARIRDARKRIDDLEGRQQALRAKQQALYFMFLQQIAYFTKLKTLWTELAAYRPNCSC 94
           LKE   R  R RI  L      L   Q       L   AYFT+LKTLW+ELA YRP CSC
Sbjct: 122 LKERFQRQNRPRIFQLRRELSNLTQDQ-------LSVTAYFTRLKTLWSELALYRPACSC 181

Query: 95  GRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAQLLLMEPPPTINRAFALIAQEVQQ 154
           GRC+ GGVKS+  ++Q EYVM FLMGLN SFSQIRAQLLLMEP PTINRAFAL+AQE+QQ
Sbjct: 182 GRCSYGGVKSIEAHYQQEYVMAFLMGLNVSFSQIRAQLLLMEPAPTINRAFALVAQEMQQ 241

Query: 155 RVISQISPANSSASSTAFMVRGTQNSNSSNLSNSSTSSNRSLSNQGKRKEKSMCTHCGLL 214
           R IS      S  S TA  VR T NS++S L++SS S         KRK+KS+CTHCG+ 
Sbjct: 242 RSIS----LPSVTSPTASAVRATSNSSNSRLNSSSAS-------HMKRKDKSLCTHCGIY 301

Query: 215 SHTVDRCYKLHGYPPGYRNSNARGTHPSPAPAKSADATSKNTAAIP----DSLSHINADQ 271
            HTVD+CYKLH YPPGYR+S  + T  +   ++SA+A SK+ +A P    +SL+ + ADQ
Sbjct: 302 GHTVDKCYKLHEYPPGYRSSVHKTTSSNATSSRSAEAPSKSVSATPSGISNSLATLTADQ 343

[Close]

BLAST of Moc03g28930 vs. ExPASy TrEMBL
Match: A0A6J1E1U3 (uncharacterized protein LOC111025199 OS=Momordica charantia OX=3673 GN=LOC111025199 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.8e-45
Identity = 100/156 (64.10%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 73  AYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAQL 132
           AYFT+LKTLWTELA+Y  +C+C +C+CGGVK++ EYFQ EYVMCFLMGLNDSFSQIRAQL
Sbjct: 54  AYFTQLKTLWTELASYYSSCTCSKCSCGGVKAIGEYFQMEYVMCFLMGLNDSFSQIRAQL 113

Query: 133 LLMEPPPTINRAFALIAQEVQQRVISQISPANSSASSTAFMVRGTQNSNSSNLSNSSTSS 192
           LLMEP P+IN AFALIAQEVQQ  IS  S AN    +TAF+ R +  ++  + S+S    
Sbjct: 114 LLMEPAPSINWAFALIAQEVQQCAISSPSLAN----ATAFLARASSPAHGPHSSSS---- 173

Query: 193 NRSLSNQGKRKEKSMCTHCGLLSHTVDRCYKLHGYP 229
               S+Q K+KEK++CTHCG++ H VDRCYKLHGYP
Sbjct: 174 ----SSQYKKKEKTVCTHCGIVGHMVDRCYKLHGYP 197

[Close]

BLAST of Moc03g28930 vs. ExPASy TrEMBL
Match: A0A5J4ZHF9 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_017116 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 8.4e-42
Identity = 123/319 (38.56%), Postives = 181/319 (56.74%), Query Frame = 0


Query: 46  RIDDLEGRQQALRAKQQALYFMFLQQIAYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSL 105
           RI  L+     LR +Q ++         YFTKLKT+W EL+ YRPNCSCG+C+CGGVK+L
Sbjct: 93  RIFQLKRELMNLRQEQSSVSI-------YFTKLKTIWEELSNYRPNCSCGKCSCGGVKNL 152

Query: 106 VEYFQTEYVMCFLMGLNDSFSQIRAQLLLMEPPPTINRAFALIAQEVQQRVISQISPANS 165
             + Q EY+M FLM L+DSFSQ+R QLLLM+P P INR F+LI QE QQR  +  S +++
Sbjct: 153 NNHHQMEYIMSFLMELDDSFSQVRGQLLLMDPIPPINRVFSLIVQEEQQRRTNPSSDSSN 212

Query: 166 SASSTAFMVRGTQNSNSSNLSNSSTSSNRSLSNQGKRKEKSMCTHCGLLSHTVDRCYKLH 225
           S S+ AF V+     +  + S SS SS    +++ +++++  CTHC +L HTVDRCYK+H
Sbjct: 213 STSTMAFAVKTDFTKSGGSGSQSSNSS----ASKNQKRDRPYCTHCKILGHTVDRCYKIH 272

Query: 226 GYPPGYRNSNARGTHPSPAPAKSADATSKNTAAIPDSLSHINADQY------------SS 285
           GYPPGY+  +   ++ +     ++D  S  + +    + ++N++QY            +S
Sbjct: 273 GYPPGYKFRSNNNSNAAAHQVSTSDDRSDQSNSFGGFVQNLNSNQYQQLMSMLSTHLSNS 332

Query: 286 GPTTN----------VDQNIVSQPPVSASHVFMD-EFVPDVVHTDSVVDESLTTFV---T 339
              TN           DQ I S P +   H  +   F+PD+  +  V D  +T+ V    
Sbjct: 333 AKVTNALDPSQTNCLADQVIDSFPDLVLPHSSLQAHFIPDLA-SSHVHDPPVTSGVPADL 392

[Close]

BLAST of Moc03g28930 vs. ExPASy TrEMBL
Match: A0A5J5B2C5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029212 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.4e-41
Identity = 117/301 (38.87%), Postives = 173/301 (57.48%), Query Frame = 0


Query: 46  RIDDLEGRQQALRAKQQALYFMFLQQIAYFTKLKTLWTELAAYRPNCSCGRCTCGGVKSL 105
           RI  L+     LR +Q ++         YFTK+KT+W EL+ YRPNCSCG+C CGGVK+L
Sbjct: 137 RIFQLKRELMNLRQEQSSVSI-------YFTKVKTIWEELSNYRPNCSCGKCYCGGVKNL 196

Query: 106 VEYFQTEYVMCFLMGLNDSFSQIRAQLLLMEPPPTINRAFALIAQEVQQRVISQISPANS 165
            +Y QTEY+M FLMGL+DSFSQ+  QLLLM+  P INR F+LI QE QQR  +  S +++
Sbjct: 197 NDYHQTEYIMSFLMGLDDSFSQVSGQLLLMDSMPPINRVFSLIVQEEQQRRTNLSSDSSN 256

Query: 166 SASSTAFMVRGTQNSNSSNLSNSSTSSNRSLSNQGKRKEKSMCTHCGLLSHTVDRCYKLH 225
           S  + AF+V+     +  + S +S +SN S S   KR ++  CTHC +L HTVDRCYK+H
Sbjct: 257 STGTMAFVVKTDVAKSGGSGSQNSQNSNSSASKNQKR-DRPYCTHCKILGHTVDRCYKIH 316

Query: 226 GYPPGYRNSNARGTHPSPAPAKSADATSKNTAAIPDSLSHINADQYSS-----GPTTNVD 285
           GYPPGY+  +   ++ +     ++D  S  + +    + ++N++QY           +  
Sbjct: 317 GYPPGYKFRSNNNSNAAAYQVSTSDDRSDQSNSFEGFVQNLNSNQYQQLMSMLSTHLSSS 376

Query: 286 QNIVSQPPVSASHVFMDEFVPDVVHTDSVVDESLTTFV---TPTDTSTANDVIVSSSAIA 339
           + + + P  S ++   D      + +  V D  +T+ V    P D   +N  IVSSS  +
Sbjct: 377 KKVTNAPDPSQTNCLAD------LTSSHVHDPLVTSGVPADLPIDRPDSNSPIVSSSGPS 423

The following BLAST results are available for this feature:

BLAST of Moc03g28930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148562.1	7.9e-95	93.94	uncharacterized protein LOC111017196 [Momordica charantia]	[more]
XP_022154919.1	3.1e-51	55.00	uncharacterized protein LOC111022065 [Momordica charantia]	[more]
XP_022158736.1	5.7e-45	64.10	uncharacterized protein LOC111025199 [Momordica charantia]	[more]
XP_038904477.1	7.0e-43	48.21	uncharacterized protein LOC120090845 [Benincasa hispida]	[more]
KAA8517066.1	1.7e-41	38.56	hypothetical protein F0562_017116 [Nyssa sinensis]	[more]

BLAST of Moc03g28930 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g28930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5E3	3.8e-95	93.94	uncharacterized protein LOC111017196 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DNP7	1.5e-51	55.00	uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1E1U3	2.8e-45	64.10	uncharacterized protein LOC111025199 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A5J4ZHF9	8.4e-42	38.56	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_017116 PE=4 SV=1	[more]
A0A5J5B2C5	2.4e-41	38.87	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029212 PE=4 SV=1	[more]

BLAST of Moc03g28930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..253
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 72..279
None	No IPR available	PANTHER	PTHR34222:SF6	OS02G0671800 PROTEIN	coord: 72..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g28930.1	Moc03g28930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding