Moc03g28170 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g28170
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	chr3: 20227251 .. 20227934 (-)
RNA-Seq Expression	Moc03g28170
Synteny	Moc03g28170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGTCCCAGTCACTTGCCCGTGCAGCATACGAACACGCCAGAACAACGGCCCGTCATCAAGCGCCACCACACGGCGCGTTACTACGCCCACCGCGTCAAGGAGAGCCTCACCACGCGCCTCTCCAAGCTCATATGCGCCATTTTCTTGAGCCTACTCTTGATCGTGGGCATCATCACCTTCATTCTGTGGCTCAGTTTACGGCCCCACCGGCCCAGATTCTTCATCCACGAGTTTTCGGTTCCGGGCTTGGGCCTCGACAACGGCTTCGAGAATGCCCAGATCGTGTTCAACGTCACGGCCCGGAACTCCAACCAAAACATCGGGATCTACTACGAGTCGATGTCCGGTTCGGTCTACTACAAGGACCAGAAAATCGGGTCGGCGCAGCTGCTGGATTCCTATTACGAGGGGCCGAAGACCACGAGGGTGCTGGCGGCGGTGCTGACCGGAGCGACGCTGAACGTGAACAGCCAGCGGTGGATGGAATTCAGCAACGATCGGGCGAAGGGGACGGTGGGTTTCCGGCTGGAGATATCGTCCACTATCCGGTTCAAGATATCCACGTGGGATAGTAAGCGCCACGGCATGCACGCCAATTGTGACGTGGCGGTGGGCCCCGATGGAACCATTTTGCCTTCCTCGAAGGACGTCAGATGTCCAGTCTACTTCACCAGCTGA

mRNA sequence

ATGCAGAGTCCCAGTCACTTGCCCGTGCAGCATACGAACACGCCAGAACAACGGCCCGTCATCAAGCGCCACCACACGGCGCGTTACTACGCCCACCGCGTCAAGGAGAGCCTCACCACGCGCCTCTCCAAGCTCATATGCGCCATTTTCTTGAGCCTACTCTTGATCGTGGGCATCATCACCTTCATTCTGTGGCTCAGTTTACGGCCCCACCGGCCCAGATTCTTCATCCACGAGTTTTCGGTTCCGGGCTTGGGCCTCGACAACGGCTTCGAGAATGCCCAGATCGTGTTCAACGTCACGGCCCGGAACTCCAACCAAAACATCGGGATCTACTACGAGTCGATGTCCGGTTCGGTCTACTACAAGGACCAGAAAATCGGGTCGGCGCAGCTGCTGGATTCCTATTACGAGGGGCCGAAGACCACGAGGGTGCTGGCGGCGGTGCTGACCGGAGCGACGCTGAACGTGAACAGCCAGCGGTGGATGGAATTCAGCAACGATCGGGCGAAGGGGACGGTGGGTTTCCGGCTGGAGATATCGTCCACTATCCGGTTCAAGATATCCACGTGGGATAGTAAGCGCCACGGCATGCACGCCAATTGTGACGTGGCGGTGGGCCCCGATGGAACCATTTTGCCTTCCTCGAAGGACGTCAGATGTCCAGTCTACTTCACCAGCTGA

Coding sequence (CDS)

ATGCAGAGTCCCAGTCACTTGCCCGTGCAGCATACGAACACGCCAGAACAACGGCCCGTCATCAAGCGCCACCACACGGCGCGTTACTACGCCCACCGCGTCAAGGAGAGCCTCACCACGCGCCTCTCCAAGCTCATATGCGCCATTTTCTTGAGCCTACTCTTGATCGTGGGCATCATCACCTTCATTCTGTGGCTCAGTTTACGGCCCCACCGGCCCAGATTCTTCATCCACGAGTTTTCGGTTCCGGGCTTGGGCCTCGACAACGGCTTCGAGAATGCCCAGATCGTGTTCAACGTCACGGCCCGGAACTCCAACCAAAACATCGGGATCTACTACGAGTCGATGTCCGGTTCGGTCTACTACAAGGACCAGAAAATCGGGTCGGCGCAGCTGCTGGATTCCTATTACGAGGGGCCGAAGACCACGAGGGTGCTGGCGGCGGTGCTGACCGGAGCGACGCTGAACGTGAACAGCCAGCGGTGGATGGAATTCAGCAACGATCGGGCGAAGGGGACGGTGGGTTTCCGGCTGGAGATATCGTCCACTATCCGGTTCAAGATATCCACGTGGGATAGTAAGCGCCACGGCATGCACGCCAATTGTGACGTGGCGGTGGGCCCCGATGGAACCATTTTGCCTTCCTCGAAGGACGTCAGATGTCCAGTCTACTTCACCAGCTGA

Protein sequence

MQSPSHLPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEISSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFTS

Homology

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BLAST of Moc03g28170 vs. NCBI nr
Match: XP_022994264.1 (NDR1/HIN1-like protein 26 [Cucurbita maxima])

HSP 1 Score: 404.4 bits (1038), Expect = 6.3e-109
Identity = 196/226 (86.73%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           MQSPS LPV HTNTPE+RP IKRHHTARYY HRVKESLTTRLSKLICAIFLSLLLIVGII
Sbjct: 1   MQSPSQLPVHHTNTPERRP-IKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60

Query: 61  TFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSV 120
           TFILWLSLRPHRPRFFIH+FSVPGLGL+ GFENAQI FNVTARNSN NIGIYY S++GSV
Sbjct: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120

Query: 121 YYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEI 180
           YY+DQKIGS  LLDSYYEGPKTT+VLAAVL+GATLN+N++RWMEF+NDR+KGTV FRLEI
Sbjct: 121 YYRDQKIGSTPLLDSYYEGPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEI 180

Query: 181 SSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           +STIRF+ISTWDSKRHGMHANCDV+VGPDG ILPS++DVRCPVYFT
Sbjct: 181 TSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSARDVRCPVYFT 225

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BLAST of Moc03g28170 vs. NCBI nr
Match: XP_022955056.1 (NDR1/HIN1-like protein 26 [Cucurbita moschata] >XP_023542769.1 NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6573210.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012384.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.0 bits (1029), Expect = 6.9e-108
Identity = 195/226 (86.28%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           M SPS LPV HTNTPE RP IKRHHTARYY HRVKESLTTRLSKLICAIFLSLLLIVGII
Sbjct: 1   MHSPSQLPVHHTNTPEHRP-IKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60

Query: 61  TFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSV 120
           TFILWLSLRPHRPRFFIH+FSVPGLGL+ GFENAQI FNVTARNSN NIGIYY S++GSV
Sbjct: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120

Query: 121 YYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEI 180
           YY+DQKIGS  LLDSYYE PKTT+VLAAVL+GATLN+N++RWMEF+NDR+KGTV FRLEI
Sbjct: 121 YYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEI 180

Query: 181 SSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           +STIRF+ISTWDSKRHGMHANCDV+VGPDG ILPSS+DVRCPVYFT
Sbjct: 181 TSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 225

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BLAST of Moc03g28170 vs. NCBI nr
Match: XP_023522985.1 (NDR1/HIN1-like protein 26, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 193/224 (86.16%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           M SPS LPV HTNTPE RP IKRHHTARYY HRVKESLTTRLSKLICAIFLSLLLIVGII
Sbjct: 1   MHSPSQLPVHHTNTPEHRP-IKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60

Query: 61  TFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSV 120
           TFILWLSLRPHRPRFFIH+FSVPGLGL+ GFENAQI FNVTARNSN NIGIYY S++GSV
Sbjct: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120

Query: 121 YYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEI 180
           YY+DQKIGS  LLDSYYE PKTT+VLAAVL+GATLN+N++RWMEF+NDR+KGTV FRLEI
Sbjct: 121 YYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEI 180

Query: 181 SSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVY 225
           +STIRF+ISTWDSKRHGMHANCDV+VGPDG ILPSS+DVRCPVY
Sbjct: 181 TSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVY 223

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BLAST of Moc03g28170 vs. NCBI nr
Match: XP_038895222.1 (NDR1/HIN1-like protein 26 [Benincasa hispida])

HSP 1 Score: 388.7 bits (997), Expect = 3.6e-104
Identity = 190/226 (84.07%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           M SPS LPV HTNTPEQRP  K HH+ARYYAHRVKES+TTR+SKLICAIFLSLLLI+GII
Sbjct: 1   MSSPSQLPVHHTNTPEQRPT-KHHHSARYYAHRVKESITTRVSKLICAIFLSLLLIIGII 60

Query: 61  TFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSV 120
           TFILWLSLRPHRPRFFIH+FSV GL LDNGFENAQIVFNVTARNSN NIGIYY+SMSGSV
Sbjct: 61  TFILWLSLRPHRPRFFIHDFSVTGLALDNGFENAQIVFNVTARNSNLNIGIYYDSMSGSV 120

Query: 121 YYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEI 180
           YYKDQK+GS  LLDSYYE PKTT+VL A L+G TLNV+ QRWME SN+R+KG V FRLEI
Sbjct: 121 YYKDQKLGSTPLLDSYYEAPKTTKVLTAALSGETLNVDRQRWMEISNERSKGAVAFRLEI 180

Query: 181 SSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           SSTIRFKIS WDSKRHGMHANC V+VGPDG ILPSSKD+RCPVYFT
Sbjct: 181 SSTIRFKISAWDSKRHGMHANCVVSVGPDGMILPSSKDIRCPVYFT 225

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BLAST of Moc03g28170 vs. NCBI nr
Match: XP_016899097.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0056885.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYJ99388.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPV--IKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M SPSHLPV HT+TPEQRP    K HH+ARYYAHRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQRPTAPTKHHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSG 120
           IITFILWLSLRPHRPRFFIH+FSV G GLDNGFENAQIVFN TARNSN NIGIYY++MSG
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFSVTGFGLDNGFENAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRL 180
           SVYYKDQKIGS  LLDSYYEGPKTT+VL A L+GATLNV+ Q+WME SN+R+KG V FRL
Sbjct: 121 SVYYKDQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNVDRQQWMEMSNERSKGVVVFRL 180

Query: 181 EISSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           EI+STIRF+IS WDSKRHGMHANC V+VG DG ILPSSKDVRCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHGMHANCPVSVGSDGMILPSSKDVRCPVYFT 228

[Close]

BLAST of Moc03g28170 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.2e-15
Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 45  LICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLGLD-NGFENAQIVFNVTAR 104
           LIC I +++ +I+G+   ILWL  RP+  +F++ + ++     D N   +  +  N T R
Sbjct: 54  LICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIR 113

Query: 105 NSNQNIGIYYESMSGSVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNV-NSQRW 164
           N NQ +G+YY+  S S YY DQ+ GSA  + S+Y+G K T V+   + G  L V      
Sbjct: 114 NPNQRVGVYYDEFSVSGYYGDQRFGSAN-VSSFYQGHKNTTVILTKIEGQNLVVLGDGAR 173

Query: 165 MEFSNDRAKGTVGFRLEISSTIRFK---ISTWDSK 195
            +  +D   G      ++  ++RFK   I +W  K
Sbjct: 174 TDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLK 207

[Close]

BLAST of Moc03g28170 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-15
Identity = 54/179 (30.17%), Postives = 87/179 (48.60%), Query Frame = 0


Query: 50  FLSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLGLDNG---FENAQIVFNVTARNSN 109
           F  LLLI+    F++WL L P RP F + E  +  L L        N+ +   + ++N N
Sbjct: 35  FSGLLLII----FLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPN 94

Query: 110 QNIGIYYESMSGSVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFS 169
           + +GIYY+ +     Y+ Q+I S   L  +Y+  +   +L A L G  L V      + S
Sbjct: 95  KKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQIS 154

Query: 170 NDRAKGTVGFRLEISSTIRFKISTWDSKRHGMHANC--DVAVGPDGTILP--SSKDVRC 222
            +R+ G +   +++   +R+KI TW S  +  + NC   VA G + T  P  S +  RC
Sbjct: 155 RERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFGMNMTTPPLASLQGTRC 209

[Close]

BLAST of Moc03g28170 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 55/173 (31.79%), Postives = 82/173 (47.40%), Query Frame = 0


Query: 47  CAIFLSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLGLD-NGFENAQIVFNVTARNS 106
           C   LS +   G+ +  LWLSLR  +P+  I  F +P LG D N  +N  + F V   N 
Sbjct: 15  CTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDNP 74

Query: 107 NQNIGIYYESMS-GSVYYKDQKIGSAQL-------LDSYYEGPKTTRVLAAVLTGATLNV 166
           N++ GIYY+ +          KI S+ L       +  +Y+G K      A   G    +
Sbjct: 75  NKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKK----KAKKWGQVKPL 134

Query: 167 NSQRWMEFSNDRAKGTVGFRLEISSTIRFKISTWDSKRHGMHANCDVAVGPDG 211
           N+Q  +        G+  FRL++ + +RFKI  W +KR+G+    DV V  DG
Sbjct: 135 NNQTVLRAV--LPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDG 181

[Close]

BLAST of Moc03g28170 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.7e-12
Identity = 37/162 (22.84%), Postives = 78/162 (48.15%), Query Frame = 0


Query: 46  ICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLGLDN-GFENAQIVFNVTARN 105
           IC + +  ++IV I  F++W+ L+P +PRF + + +V    L       +     + +RN
Sbjct: 21  ICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRN 80

Query: 106 SNQNIGIYYESMSGSVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWME 165
            N  IGIYY+ +     Y++Q+I     +   Y+G K   V +  + G ++ +     + 
Sbjct: 81  RNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVA 140

Query: 166 FSNDRAKGTVGFRLEISSTIRFKISTWDSKRHGMHANCDVAV 207
             +++ +G V   +     +R+K+ T  + ++ +H  C   +
Sbjct: 141 LGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

[Close]

BLAST of Moc03g28170 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 42/165 (25.45%), Postives = 75/165 (45.45%), Query Frame = 0


Query: 42  LSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLG--LDNGFENAQIVFN 101
           L  L   + +SL++I+G+   I WL +RP   +F + + S+        +      +   
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 102 VTARNSNQNIGIYYESMSGSVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNV-N 161
           V  RN N+ IG+YY+ +    YY+ ++  S   L  +Y+G K T VL     G  L + N
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRF-STITLTPFYQGHKNTTVLTPTFQGQNLVIFN 156

Query: 162 SQRWMEFSNDRAKGTVGFRLEISSTIRFKISTWDSKRHGMHANCD 204
           + +    + +R  G     ++    +RFK+     +R     +CD
Sbjct: 157 AGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCD 200

[Close]

BLAST of Moc03g28170 vs. ExPASy TrEMBL
Match: A0A6J1K2E7 (NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111490050 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.0e-109
Identity = 196/226 (86.73%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           MQSPS LPV HTNTPE+RP IKRHHTARYY HRVKESLTTRLSKLICAIFLSLLLIVGII
Sbjct: 1   MQSPSQLPVHHTNTPERRP-IKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60

Query: 61  TFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSV 120
           TFILWLSLRPHRPRFFIH+FSVPGLGL+ GFENAQI FNVTARNSN NIGIYY S++GSV
Sbjct: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120

Query: 121 YYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEI 180
           YY+DQKIGS  LLDSYYEGPKTT+VLAAVL+GATLN+N++RWMEF+NDR+KGTV FRLEI
Sbjct: 121 YYRDQKIGSTPLLDSYYEGPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEI 180

Query: 181 SSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           +STIRF+ISTWDSKRHGMHANCDV+VGPDG ILPS++DVRCPVYFT
Sbjct: 181 TSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSARDVRCPVYFT 225

[Close]

BLAST of Moc03g28170 vs. ExPASy TrEMBL
Match: A0A6J1GSN4 (NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111457132 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.4e-108
Identity = 195/226 (86.28%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           M SPS LPV HTNTPE RP IKRHHTARYY HRVKESLTTRLSKLICAIFLSLLLIVGII
Sbjct: 1   MHSPSQLPVHHTNTPEHRP-IKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60

Query: 61  TFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSV 120
           TFILWLSLRPHRPRFFIH+FSVPGLGL+ GFENAQI FNVTARNSN NIGIYY S++GSV
Sbjct: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120

Query: 121 YYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEI 180
           YY+DQKIGS  LLDSYYE PKTT+VLAAVL+GATLN+N++RWMEF+NDR+KGTV FRLEI
Sbjct: 121 YYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEI 180

Query: 181 SSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           +STIRF+ISTWDSKRHGMHANCDV+VGPDG ILPSS+DVRCPVYFT
Sbjct: 181 TSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 225

[Close]

BLAST of Moc03g28170 vs. ExPASy TrEMBL
Match: A0A5A7UTL7 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006060 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.6e-104
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPV--IKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M SPSHLPV HT+TPEQRP    K HH+ARYYAHRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQRPTAPTKHHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSG 120
           IITFILWLSLRPHRPRFFIH+FSV G GLDNGFENAQIVFN TARNSN NIGIYY++MSG
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFSVTGFGLDNGFENAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRL 180
           SVYYKDQKIGS  LLDSYYEGPKTT+VL A L+GATLNV+ Q+WME SN+R+KG V FRL
Sbjct: 121 SVYYKDQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNVDRQQWMEMSNERSKGVVVFRL 180

Query: 181 EISSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           EI+STIRF+IS WDSKRHGMHANC V+VG DG ILPSSKDVRCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHGMHANCPVSVGSDGMILPSSKDVRCPVYFT 228

[Close]

BLAST of Moc03g28170 vs. ExPASy TrEMBL
Match: A0A1S4DSX4 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103485613 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.6e-104
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPV--IKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M SPSHLPV HT+TPEQRP    K HH+ARYYAHRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQRPTAPTKHHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSG 120
           IITFILWLSLRPHRPRFFIH+FSV G GLDNGFENAQIVFN TARNSN NIGIYY++MSG
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFSVTGFGLDNGFENAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRL 180
           SVYYKDQKIGS  LLDSYYEGPKTT+VL A L+GATLNV+ Q+WME SN+R+KG V FRL
Sbjct: 121 SVYYKDQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNVDRQQWMEMSNERSKGVVVFRL 180

Query: 181 EISSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           EI+STIRF+IS WDSKRHGMHANC V+VG DG ILPSSKDVRCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHGMHANCPVSVGSDGMILPSSKDVRCPVYFT 228

[Close]

BLAST of Moc03g28170 vs. ExPASy TrEMBL
Match: A0A0A0LUA7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064760 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 183/228 (80.26%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 1   MQSPSHLPVQHTNTPEQRPV--IKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M SPSHLPV HT+TPEQ P    KRHH+ARYYAHRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQHPTAPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSG 120
           IITFILWLSLRPHRPRFFIH+F+V GL L+NGFE+AQIVFN TARNSN NIGIYY++MSG
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFTVTGLSLENGFESAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRL 180
           SVYYK+QKIGS  LLDSYYEGPKTT+VL A L+GATLN++ QRWME SN+R+KG V FRL
Sbjct: 121 SVYYKEQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNIDRQRWMEISNERSKGVVVFRL 180

Query: 181 EISSTIRFKISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           EI+STIRF+IS WDSKRH MHANC V+VG DG ILPSSKD+RCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHVMHANCPVSVGSDGMILPSSKDLRCPVYFT 228

[Close]

BLAST of Moc03g28170 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 277.7 bits (709), Expect = 8.2e-75
Identity = 131/220 (59.55%), Postives = 166/220 (75.45%), Query Frame = 0


Query: 7   LPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWL 66
           +P++ +  P  +P +KRHH+A YYAHRV+ESL+TR+SK ICA+FL +L  VG+I FILWL
Sbjct: 8   IPIRTSPVPRAQP-MKRHHSASYYAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWL 67

Query: 67  SLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSVYYKDQK 126
           SLRPHRPRF I +F V GL    G ENA+I FNVT  N NQ++G+Y++SM GS+YYKDQ+
Sbjct: 68  SLRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQR 127

Query: 127 IGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEISSTIRF 186
           +G   LL+ +++ P  T ++   LTGA+L VNS RW EFSNDRA+GTVGFRL+I STIRF
Sbjct: 128 VGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRF 187

Query: 187 KISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           K+  W SK H MHANC++ VG DG ILP     RCPVYFT
Sbjct: 188 KLHRWISKHHRMHANCNIVVGRDGLILPKFNHKRCPVYFT 226

[Close]

BLAST of Moc03g28170 vs. TAIR 10
Match: AT1G61760.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 251.9 bits (642), Expect = 4.8e-67
Identity = 124/220 (56.36%), Postives = 159/220 (72.27%), Query Frame = 0


Query: 7   LPVQHTNTPEQRPVIKRHHTARYYAHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWL 66
           LPV+  + P  RP I RHH+A    HRVKESLTTR+SKLICAIFLSLLL +GIITFILW+
Sbjct: 8   LPVR--SNPSTRP-ISRHHSASNIVHRVKESLTTRVSKLICAIFLSLLLCLGIITFILWI 67

Query: 67  SLRPHRPRFFIHEFSVPGLGLDNGFENAQIVFNVTARNSNQNIGIYYESMSGSVYYKDQK 126
           SL+PHRPR  I  FS+ GL   +GFE + I F +TA N NQN+GIYY+SM GSVYYK+++
Sbjct: 68  SLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSVYYKEKR 127

Query: 127 IGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDRAKGTVGFRLEISSTIRF 186
           IGS +L + +Y+ PK T  +   L+   + VN  RWME   DR +G + FRL++ S IRF
Sbjct: 128 IGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKVRSMIRF 187

Query: 187 KISTWDSKRHGMHANCDVAVGPDGTILPSSKDVRCPVYFT 227
           K+ TW SK H M+A+C + +G DG +L ++KD RCPVYFT
Sbjct: 188 KVYTWHSKSHKMYASCYIEIGWDGMLLSATKDKRCPVYFT 224

[Close]

BLAST of Moc03g28170 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-18
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 44  KLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLGLD-NGFENAQIVFNVTA 103
           + IC    ++L+I+GII  ILWL  RPH+PR  +   ++  L        +  + F+V A
Sbjct: 42  RAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLA 101

Query: 104 RNSNQNIGIYYESMSGSVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRW 163
           RN N+ + I+Y+ +S  V YKDQ I     L     G K+T V+A V+ G  + V+ +  
Sbjct: 102 RNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEVA 161

Query: 164 MEFSNDRAKGTVGFRLEISSTIRFKISTWDSKRHGMHANCDV 205
               ND A G V  R+ I   +R+K     + R+G +A CDV
Sbjct: 162 NGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDV 203

[Close]

BLAST of Moc03g28170 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-17
Identity = 45/163 (27.61%), Postives = 83/163 (50.92%), Query Frame = 0


Query: 51  LSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLGLDN-GFENAQIVFNVTARNSNQNI 110
           L L++ V  + F++W  L PH PRF + + ++    +    F ++ +   V++RN N  I
Sbjct: 29  LGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNVSQPNFLSSNLQVTVSSRNPNDKI 88

Query: 111 GIYYESMSGSVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNSQRWMEFSNDR 170
           GI+Y+ +   V Y++Q++  A+LL S Y+G     V +  L G+ + V        + D 
Sbjct: 89  GIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVWSPFLIGSAVPVAPYLSSALNEDL 148

Query: 171 AKGTVGFRLEISSTIRFKISTWDSKRHGMHANCDVAVGPDGTI 213
             G V   ++I   +R+K+ +W S  + +H NC   +   G +
Sbjct: 149 FAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFITVTGKL 191

[Close]

BLAST of Moc03g28170 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 85.1 bits (209), Expect = 7.8e-17
Identity = 46/163 (28.22%), Postives = 82/163 (50.31%), Query Frame = 0


Query: 41  RLSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHEFSVPGLGLDN-GFENAQIVFN 100
           ++ K I A+ L  L  V  + F++W  L PH PRF + + ++    +    +  + +   
Sbjct: 15  KMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQPNYLTSNLQVT 74

Query: 101 VTARNSNQNIGIYYESMSGSVYYKDQKIGSAQLLDSYYEGPKTTRVLAAVLTGATLNVNS 160
           +++RN N  IGI+Y+ +     Y++Q++  A LL + Y+G     + +  L G T+ V  
Sbjct: 75  LSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYGTTVPVAP 134

Query: 161 QRWMEFSNDRAKGTVGFRLEISSTIRFKISTWDSKRHGMHANC 203
                 S D   G V   ++I   +R+K+ TW S R+ +H NC
Sbjct: 135 YFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNC 177

The following BLAST results are available for this feature:

BLAST of Moc03g28170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022994264.1	6.3e-109	86.73	NDR1/HIN1-like protein 26 [Cucurbita maxima]	[more]
XP_022955056.1	6.9e-108	86.28	NDR1/HIN1-like protein 26 [Cucurbita moschata] >XP_023542769.1 NDR1/HIN1-like pr...	[more]
XP_023522985.1	1.3e-106	86.16	NDR1/HIN1-like protein 26, partial [Cucurbita pepo subsp. pepo]	[more]
XP_038895222.1	3.6e-104	84.07	NDR1/HIN1-like protein 26 [Benincasa hispida]	[more]
XP_016899097.1	1.8e-103	82.89	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0056885.1 NDR1/HIN1-like...	[more]

BLAST of Moc03g28170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN1	3.2e-15	32.26	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9FI03	5.5e-15	30.17	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
O48915	1.0e-13	31.79	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]
Q9SJ54	5.7e-12	22.84	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9SJ52	1.8e-10	25.45	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of Moc03g28170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K2E7	3.0e-109	86.73	NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111490050 PE=4 SV=1	[more]
A0A6J1GSN4	3.4e-108	86.28	NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111457132 PE=4 SV=...	[more]
A0A5A7UTL7	8.6e-104	82.89	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S4DSX4	8.6e-104	82.89	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103485613 PE=4 SV=1	[more]
A0A0A0LUA7	1.2e-100	80.26	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064760 PE=4 ...	[more]

BLAST of Moc03g28170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05220.1	8.2e-75	59.55	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G61760.1	4.8e-67	56.36	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01410.1	1.9e-18	34.57	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G22200.1	2.1e-17	27.61	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G44220.1	7.8e-17	28.22	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 99..202 e-value: 2.1E-11 score: 44.3
None	No IPR available	PANTHER	PTHR31415:SF3	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 22..226
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 22..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g28170.1	Moc03g28170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma