Moc03g27520 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g27520
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Glucose-fructose oxidoreductase domain-containing protein 2, putative
Location	chr3: 19798022 .. 19798660 (-)
RNA-Seq Expression	Moc03g27520
Synteny	Moc03g27520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAATTTGAGCCTTCCAATGTGGACCAGTTCAAGCTAAATTGTCCACTGTGCTGGAGACGCCTCAAGGCTCAACCTGTAGCTGTAGCTTCTTCCGAACACCAAACCACACAAGCTTGCGCTCTACACTTGCCACTCTCTTCAAAACTCCTACCCTTTCTCGTAATCCTCATATATATGCAGCTTCTCCCCTGATCTGAGCAGCATAGCGCAGTGTTTCTTCTTATTTACGATACCCTTTGAACTCCCGTGTTGCTCTGGCTGATTACCACTCGAGAAATTTGCAAGCATTTCTTTGGGGAATTTTATCAAACAGGTCGTGTGCAAGAACCTGTGCGCTTACCAATGAAACTTGAAGGCGGAAGAAGCTTGGAGCGGATGAATGCTTATGGGAAGAAACAATGTAGGAGCTTGTTCTGGAGGGCGAGGGCGGCCTTAAAGAAGGCTATGAAGAATGGAAGCAAGCGACAACTCAAGTTTCAGTACGATCCCAGCAGCTATGCTCTTAATTTTGATGATGGTCACAACAAAATGGGCGAGGATTCTGATGCCTTCAAATTTGAACTTCAGTACTGTGGCAGTGCTTGCAATTCCGCCATGTGGGTTTATGTTCTTTGGGTGAAATCTGAGCGATGA

mRNA sequence

ATGGTAGAATTTGAGCCTTCCAATGTGGACCAGTTCAAGCTAAATTGTCCACTGTGCTGGAGACGCCTCAAGGCTCAACCTGTAGCTGTAGCTTCTTCCGAACACCAAACCACACAAGCTTGCGCTCTACACTTGCCACTCTCTTCAAAACTCCTACCCTTTCTCCATTTCTTTGGGGAATTTTATCAAACAGGTCGTGTGCAAGAACCTGTGCGCTTACCAATGAAACTTGAAGGCGGAAGAAGCTTGGAGCGGATGAATGCTTATGGGAAGAAACAATGTAGGAGCTTGTTCTGGAGGGCGAGGGCGGCCTTAAAGAAGGCTATGAAGAATGGAAGCAAGCGACAACTCAAGTTTCAGTACGATCCCAGCAGCTATGCTCTTAATTTTGATGATGGTCACAACAAAATGGGCGAGGATTCTGATGCCTTCAAATTTGAACTTCAGTACTGTGGCAGTGCTTGCAATTCCGCCATGTGGGTTTATGTTCTTTGGGTGAAATCTGAGCGATGA

Coding sequence (CDS)

ATGGTAGAATTTGAGCCTTCCAATGTGGACCAGTTCAAGCTAAATTGTCCACTGTGCTGGAGACGCCTCAAGGCTCAACCTGTAGCTGTAGCTTCTTCCGAACACCAAACCACACAAGCTTGCGCTCTACACTTGCCACTCTCTTCAAAACTCCTACCCTTTCTCCATTTCTTTGGGGAATTTTATCAAACAGGTCGTGTGCAAGAACCTGTGCGCTTACCAATGAAACTTGAAGGCGGAAGAAGCTTGGAGCGGATGAATGCTTATGGGAAGAAACAATGTAGGAGCTTGTTCTGGAGGGCGAGGGCGGCCTTAAAGAAGGCTATGAAGAATGGAAGCAAGCGACAACTCAAGTTTCAGTACGATCCCAGCAGCTATGCTCTTAATTTTGATGATGGTCACAACAAAATGGGCGAGGATTCTGATGCCTTCAAATTTGAACTTCAGTACTGTGGCAGTGCTTGCAATTCCGCCATGTGGGTTTATGTTCTTTGGGTGAAATCTGAGCGATGA

Protein sequence

MVEFEPSNVDQFKLNCPLCWRRLKAQPVAVASSEHQTTQACALHLPLSSKLLPFLHFFGEFYQTGRVQEPVRLPMKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGHNKMGEDSDAFKFELQYCGSACNSAMWVYVLWVKSER

Homology

[Close]

BLAST of Moc03g27520 vs. NCBI nr
Match: KGN64641.1 (hypothetical protein Csa_013386 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-37
Identity = 78/96 (81.25%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 75  MKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGH 134
           MK+EG RSLERMNAYGKKQCRSLFW+ +AALKKA+KNG+KRQLKFQYDPSSYALNFDDGH
Sbjct: 1   MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60

Query: 135 NKMGEDS-DAFKFELQYCGSACNSAMWVYVLWVKSE 170
           +++ ED+ DA+KFE+QYCG+  NSAMWVYVLWVKSE
Sbjct: 61  SEIREDNVDAYKFEVQYCGNVYNSAMWVYVLWVKSE 96

[Close]

BLAST of Moc03g27520 vs. NCBI nr
Match: KAA0056955.1 (putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa] >TYK26382.1 putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-36
Identity = 77/96 (80.21%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 75  MKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGH 134
           MK+EG RSLERMNAYGKKQCRSLFW+ +AALKKA+KNG+KRQLKFQYDPSSYALNFDDGH
Sbjct: 24  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 83

Query: 135 NKMGEDS-DAFKFELQYCGSACNSAMWVYVLWVKSE 170
           +K+ ED+ +A+KFE+QYCG+  NSA WVYVLWVKSE
Sbjct: 84  SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 119

[Close]

BLAST of Moc03g27520 vs. NCBI nr
Match: KAG6584014.1 (hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-25
Identity = 67/97 (69.07%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 75  MKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQ--LKFQYDPSSYALNFDD 134
           MKLEGGR LER NAYGKKQC +LFWR RAALKKA+KNGS RQ  LKFQYDPSSYALNFDD
Sbjct: 1   MKLEGGRRLERTNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60

Query: 135 GHNKMGEDSDAFKFELQYCGSACNSAMWVYVLWVKSE 170
           G           ++ELQ+C +  NSAM  YVLW KSE
Sbjct: 61  GRT---------RYELQHCANVYNSAMRAYVLWGKSE 88

[Close]

BLAST of Moc03g27520 vs. NCBI nr
Match: KAG6573243.1 (hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.8 bits (281), Expect = 2.8e-21
Identity = 56/75 (74.67%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 75  MKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGH 134
           MKL+G   L RMNAYGK+QC SLFWR RAALKKA+KNGSKR L+FQYDPSSYALNFDDGH
Sbjct: 1   MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60

Query: 135 NKMGED--SDAFKFE 148
            K+ ED   DA K+E
Sbjct: 61  TKISEDILDDASKYE 75

[Close]

BLAST of Moc03g27520 vs. NCBI nr
Match: KAF5474338.1 (hypothetical protein F2P56_006246 [Juglans regia])

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-20
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 73  LPMKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKN-GSKRQLKFQYDPSSYALNFD 132
           +P+ +  G SLE ++AY KKQCRSLFWR RAA+KKA+KN G ++QLKFQYDPSSYALNFD
Sbjct: 1   MPIDMGLGGSLEWVSAYSKKQCRSLFWRMRAAVKKAVKNAGKQQQLKFQYDPSSYALNFD 60

Query: 133 DGHNKMGEDSDAFKFELQYCGSACNSAMWVYVLWVKSER 171
           DG + +G+  + FK              WVYV+WVK+ER
Sbjct: 61  DGCSNLGKGGNEFKRAKFQDFPDIKKTAWVYVVWVKAER 99

[Close]

BLAST of Moc03g27520 vs. ExPASy TrEMBL
Match: A0A0A0LXB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 8.0e-38
Identity = 78/96 (81.25%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 75  MKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGH 134
           MK+EG RSLERMNAYGKKQCRSLFW+ +AALKKA+KNG+KRQLKFQYDPSSYALNFDDGH
Sbjct: 1   MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60

Query: 135 NKMGEDS-DAFKFELQYCGSACNSAMWVYVLWVKSE 170
           +++ ED+ DA+KFE+QYCG+  NSAMWVYVLWVKSE
Sbjct: 61  SEIREDNVDAYKFEVQYCGNVYNSAMWVYVLWVKSE 96

[Close]

BLAST of Moc03g27520 vs. ExPASy TrEMBL
Match: A0A5D3DSE1 (Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00440 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.2e-37
Identity = 77/96 (80.21%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 75  MKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGH 134
           MK+EG RSLERMNAYGKKQCRSLFW+ +AALKKA+KNG+KRQLKFQYDPSSYALNFDDGH
Sbjct: 24  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 83

Query: 135 NKMGEDS-DAFKFELQYCGSACNSAMWVYVLWVKSE 170
           +K+ ED+ +A+KFE+QYCG+  NSA WVYVLWVKSE
Sbjct: 84  SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 119

[Close]

BLAST of Moc03g27520 vs. ExPASy TrEMBL
Match: A0A5C7GSN3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_026626 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.7e-20
Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 82  SLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGHN-----K 141
           S E +N+YGK+QC+SLFWR RAALKKAMKNGSK Q KFQYDP SYALNFDDG       K
Sbjct: 6   SFEWVNSYGKRQCKSLFWRVRAALKKAMKNGSKNQFKFQYDPLSYALNFDDGGGGGGGCK 65

Query: 142 MGEDSDAFKFE--LQYCGSACNS-AMWVYVLWVKSER 171
           MG DS++ + +   Q C S  N+  MWVYV+ V+ E+
Sbjct: 66  MGLDSNSGRHDNKFQDCASETNNIMMWVYVVLVEKEK 102

[Close]

BLAST of Moc03g27520 vs. ExPASy TrEMBL
Match: A0A067G8B6 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034488mg PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 7.5e-20
Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 81  RSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGHNKMGED 140
           RSLE +N+YG+++CRSLFWR RAALKKA+K G K+Q KFQYDPSSYALNFDDG +  G  
Sbjct: 5   RSLEWVNSYGQRKCRSLFWRVRAALKKAVKTGGKQQFKFQYDPSSYALNFDDGRSNYGLG 64

Query: 141 SDAFKFELQYCGSACNSAMWVYVLWVKSE 170
           ++  K       S   + MWV VLWV+S+
Sbjct: 65  ANGVKQAQHQDCSESKNVMWVCVLWVESQ 93

[Close]

BLAST of Moc03g27520 vs. ExPASy TrEMBL
Match: A0A2H5N2F2 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_011340 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 7.5e-20
Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 81  RSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDGHNKMGED 140
           RSLE +N+YG+++CRSLFWR RAALKKA+K G K+Q KFQYDPSSYALNFDDG +  G  
Sbjct: 5   RSLEWVNSYGQRKCRSLFWRVRAALKKAVKTGGKQQFKFQYDPSSYALNFDDGRSNYGLG 64

Query: 141 SDAFKFELQYCGSACNSAMWVYVLWVKSE 170
           ++  K       S   + MWV VLWV+S+
Sbjct: 65  ANGVKQAQHQDCSESKNVMWVCVLWVESQ 93

[Close]

BLAST of Moc03g27520 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-05
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 75  MKLEGGRSLERMNAYGKKQCRSLFWRARAALKKAMKNGSKRQLKFQYDPSSYALNFDDG 134
           M+LE     E +N Y KK    +F R +AA+KK  K   K+Q  FQYDP SYALNFDDG
Sbjct: 1   MRLED--RFEAVNQYRKK----MFRRMKAAVKKTKK---KKQTMFQYDPWSYALNFDDG 50

The following BLAST results are available for this feature:

BLAST of Moc03g27520 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64641.1	1.6e-37	81.25	hypothetical protein Csa_013386 [Cucumis sativus]	[more]
KAA0056955.1	1.1e-36	80.21	putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis me...	[more]
KAG6584014.1	1.1e-25	69.07	hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6573243.1	2.8e-21	74.67	hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF5474338.1	2.4e-20	56.57	hypothetical protein F2P56_006246 [Juglans regia]	[more]

BLAST of Moc03g27520 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g27520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXB8	8.0e-38	81.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1	[more]
A0A5D3DSE1	5.2e-37	80.21	Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis ...	[more]
A0A5C7GSN3	5.7e-20	59.79	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_026626 PE=4 SV=1	[more]
A0A067G8B6	7.5e-20	58.43	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034488mg PE=4 SV=1	[more]
A0A2H5N2F2	7.5e-20	58.43	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_011340 PE=4 SV=1	[more]

BLAST of Moc03g27520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11112.1	1.0e-05	52.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34538:SF10	OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED	coord: 81..168
None	No IPR available	PANTHER	PTHR34538	EXPRESSED PROTEIN	coord: 81..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g27520.1	Moc03g27520.1	mRNA