Moc03g27020 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g27020
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Squamosa promoter-binding-like protein
Location	chr3: 19459497 .. 19461668 (-)
RNA-Seq Expression	Moc03g27020
Synteny	Moc03g27020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGGAAAAGCTGACGGAAAGAGGCGGCTCAATTACTCCGACATGGACGAGGAGGAGGAGGAGGAGGAAGAAGAAGAGGAGCAGCAGCGGCAGCAAGATAAGGCCGATGGGGAATTAGGGTTTGGAGGGGATTACATTAAGAAGAAGAAAATTGTGACTGCTGCTGCTAATTCTACCAACAGAGGATCAGGATCTGGGTACGCCGGAGGTGCGGCGGCGGCGTCGTGTCAGGCCGACAATTGCAATGCGGATCTGTCGAGTTCGAAGCGGTACCACCGGCGGCATAAGGTGTGTGAGTCGCATGCCAAGGCTCCGGTGGTGCCGGTGGCCGGAATCCACAAACGCTTCTGCCAGCAATGCAGCAGGTAATCAATCATCTTGGACTAAACCCTAATCTAGATCTGCATTCTGCCCTCTACCAAATAGCTTAATAATTAATCAAACCATACTTTAATTTGTCACAAAAATTACAAAAATTCAACTTTTATAAATCTAAACTGTGTATATTTAACTCTTGGATTAATTCCATGATCTCTTGAATTGGGTCGTCGGAGAGTTGGTTGACTAAAATCACTGTCGTTTTTTCATCTTTAGACCATGAATGATACATATGAAGTTGTATAATCAACCATAAAATCAAGAAAATAGTAATTATTCTATAGAGTAATGTAATAATGGTCCGAACTTTTTTTTTTTTTAATTCTCGGTTAAATCCCTATACTTTTAAAGTTTTTTTTTTTAAAGTGTTATTTTAGATTATATTTTGAGTATGTGTTTGAATTTGGATTATGTTGCTTTTTAAGATTTTAAACTCTATGTAATATTTAAAACTACAGGTTTATGTAAATGCTACTTTTGGTTAAATCTCTGATCAGACATCTATTTTTTTTAGTTAGACATTACAAAATTTTGACATGATAAATTTGTTTGACTTTGCTGATTGTCATAGGTTTTGAGTAGTGATATTTGCCATATCTACATACTAACTGTTTGAAATTCCATAACACCAACTATAAAAGATATTTGAAAAATTCTAGTGGAAGGATAAAACGAGGATGAAACTTTTTAAGCGACATAAATTATAATCACAAATTAAAATAATAATAATAATAATTTGACTTCTATTGATTTTGTAAAAATCTAAGCATTAAAATCTGTCATTTAGTACTAATATGAGCTTAGTTTAGTAGGTAAGACATATTGTTCATTTTCTTAGGTCAAACGTTGAATCCTCCATCCCCATTTGTTGTACTAAAAAAAACCATCCCATAGTTTTTCTCCAAAAATAAAAATAATAATAAAGAAAATCAAGGATTGCACGACCACTTACAAGAAATATATAATGAAGTAAAACTGTATAAATTAAAGATTTATATCTGAATACAAAGATTTCAACCCCTAACATATTTCTAAGCCTTTGATGTGTGTGTTGAAAACTTTATGTTAATGATATAGTTTAGAGCATAAAGATTAGTTGGAAAAAAATATTCATATATTTTCACATATATGTAAAATCCATAAACTCTTGTAATAAATTCAGAATCCCTATATATCCAGACATTATATTATTTAGGTAGCCCCATAGTATCAAATAATAAAACGGTAGTCCTTGACTATAAAATGATCTTTTGGTCGGAGATGGAAGTCTTAATAGAGTTAAGCTCAGATTTGACAATTAGTTATAGTTCAATTGGCAAATACTAATTGCACCATCCGGTGTTAGTGACACCCAAGATCTAGGTTTGAGGCTCTCCTATGTTGAGAAGTAACAAAAAAAAAAAATTGCATTTAGGGTTTCACCCTCTCTGAATTTCTTGCCCATGTCAAAAAAAGAAAAAATTATAGATCCATAATTTTATCTCATGGAATAATATCAACATTAGTTTGCTGTTTTTTAGTACAACATATTGGGAATTTAAAACCACCACCTTTTAGTTGGAATATGCATTAACCATTGACAGCAGTTAATCTTTATAAGCATAAAGATTTGAAAAGAAAAAATAACAACATGCTTAATGCTTTCTGTGTTCCTCTGTGAAATAATGTAGATTTCATGGGGTTGAAGAGTTTGATGAATCAAAAAGGAGTTGCCGGAAGCGGCTGGCCGGACACAACCAGCGGCGACGGAAGAGCTCATCGGACGTTCATGGCGAGAGCTCAACCTGA

mRNA sequence

ATGGCCACCGGAAAAGCTGACGGAAAGAGGCGGCTCAATTACTCCGACATGGACGAGGAGGAGGAGGAGGAGGAAGAAGAAGAGGAGCAGCAGCGGCAGCAAGATAAGGCCGATGGGGAATTAGGGTTTGGAGGGGATTACATTAAGAAGAAGAAAATTGTGACTGCTGCTGCTAATTCTACCAACAGAGGATCAGGATCTGGGTACGCCGGAGGTGCGGCGGCGGCGTCGTGTCAGGCCGACAATTGCAATGCGGATCTGTCGAGTTCGAAGCGGTACCACCGGCGGCATAAGGTGTGTGAGTCGCATGCCAAGGCTCCGGTGGTGCCGGTGGCCGGAATCCACAAACGCTTCTGCCAGCAATGCAGCAGATTTCATGGGGTTGAAGAGTTTGATGAATCAAAAAGGAGTTGCCGGAAGCGGCTGGCCGGACACAACCAGCGGCGACGGAAGAGCTCATCGGACGTTCATGGCGAGAGCTCAACCTGA

Coding sequence (CDS)

ATGGCCACCGGAAAAGCTGACGGAAAGAGGCGGCTCAATTACTCCGACATGGACGAGGAGGAGGAGGAGGAGGAAGAAGAAGAGGAGCAGCAGCGGCAGCAAGATAAGGCCGATGGGGAATTAGGGTTTGGAGGGGATTACATTAAGAAGAAGAAAATTGTGACTGCTGCTGCTAATTCTACCAACAGAGGATCAGGATCTGGGTACGCCGGAGGTGCGGCGGCGGCGTCGTGTCAGGCCGACAATTGCAATGCGGATCTGTCGAGTTCGAAGCGGTACCACCGGCGGCATAAGGTGTGTGAGTCGCATGCCAAGGCTCCGGTGGTGCCGGTGGCCGGAATCCACAAACGCTTCTGCCAGCAATGCAGCAGATTTCATGGGGTTGAAGAGTTTGATGAATCAAAAAGGAGTTGCCGGAAGCGGCTGGCCGGACACAACCAGCGGCGACGGAAGAGCTCATCGGACGTTCATGGCGAGAGCTCAACCTGA

Protein sequence

MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANSTNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST

Homology

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BLAST of Moc03g27020 vs. NCBI nr
Match: XP_022139819.1 (squamosa promoter-binding protein 2-like [Momordica charantia])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS
Sbjct: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60

Query: 61  TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ 120
           TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ
Sbjct: 61  TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ 120

Query: 121 QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 163
           QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST
Sbjct: 121 QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 162

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BLAST of Moc03g27020 vs. NCBI nr
Match: XP_038894994.1 (squamosa promoter-binding-like protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-58
Identity = 127/164 (77.44%), Postives = 142/164 (86.59%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEE--EEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAA 60
           MATGKADGKRRLNY +M+EEEE  EEEEEEE+  ++ +  GELGF GD+ KKKKI+T + 
Sbjct: 1   MATGKADGKRRLNYYEMEEEEEEDEEEEEEEEDHEEQQIHGELGFAGDFNKKKKILT-SG 60

Query: 61  NSTNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRF 120
            S+N+ SGSGY G AAA SCQADNCNADLS SKRYHRRHKVCE HAKAP V VAGIH+RF
Sbjct: 61  TSSNKKSGSGYGGAAAAPSCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIHQRF 120

Query: 121 CQQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 163
           CQQCSRFHG++EFDE+KRSCRKRLAGHNQRRRKSSSDVHGES T
Sbjct: 121 CQQCSRFHGLQEFDEAKRSCRKRLAGHNQRRRKSSSDVHGESPT 163

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BLAST of Moc03g27020 vs. NCBI nr
Match: XP_022994484.1 (squamosa promoter-binding-like protein 3 [Cucurbita maxima])

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-54
Identity = 124/165 (75.15%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRLNY D +E+EEEEEEE+E    ++  DGELGFG D+ KKKKIV      
Sbjct: 1   MATGKADGKRRLNYYDTEEDEEEEEEEDE----EEDGDGELGFGEDFNKKKKIV--GGGG 60

Query: 61  TNRGSGSGYAGGAAAA-----SCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIH 120
           +N+GSGSGY G AAAA     SCQADNC+ADLS SKRYHRRHKVCE HAKAP V VAGIH
Sbjct: 61  SNKGSGSGYGGAAAAAVAVAPSCQADNCSADLSGSKRYHRRHKVCEFHAKAPAVVVAGIH 120

Query: 121 KRFCQQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGES 161
           +RFCQQCSRFHG+ EFD +KRSCRKRLAGHNQRRRKSSSDVHGES
Sbjct: 121 QRFCQQCSRFHGLMEFDLTKRSCRKRLAGHNQRRRKSSSDVHGES 159

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BLAST of Moc03g27020 vs. NCBI nr
Match: XP_022927387.1 (squamosa promoter-binding-like protein 3 isoform X1 [Cucurbita moschata] >KAG6583985.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-54
Identity = 125/163 (76.69%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRLNY DM+EEEEEEEEE E        DGELGFGGD+ KKKK + +   S
Sbjct: 1   MATGKADGKRRLNYYDMEEEEEEEEEEVE------VVDGELGFGGDFNKKKKTLCSGGGS 60

Query: 61  TNRGSGSGYAGGAAAA-SCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFC 120
            N+ SGSGY G A AA SCQADNCNADLSSSKRYH RHKVCE HAKA  V VAGIH+RFC
Sbjct: 61  -NKKSGSGYGGAATAAPSCQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFC 120

Query: 121 QQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 163
           QQCSRFHG++EFDE+KRSCRKRLAGHNQRRRKSSSDVHG +ST
Sbjct: 121 QQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDVHGGTST 156

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BLAST of Moc03g27020 vs. NCBI nr
Match: XP_011653273.1 (squamosa promoter-binding-like protein 3 [Cucumis sativus] >KGN64693.1 hypothetical protein Csa_013791 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 5.4e-54
Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRL+Y +M+EE+EE+EEE+E + Q+   D ELGF GD+ KKKKI T +  S
Sbjct: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQE--IDAELGFSGDFNKKKKIFT-SGGS 60

Query: 61  TNRGSGSGYAGGAAAA---SCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKR 120
           +N+ S S + G  AAA    CQADNCNADLSSSKRYHRRHKVCE HAKAPVVPV GI +R
Sbjct: 61  SNKKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQR 120

Query: 121 FCQQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 163
           FCQQCSRFHG++EFDE+KRSCRKRLAGHNQRRRKSSSD+HGESST
Sbjct: 121 FCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162

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BLAST of Moc03g27020 vs. ExPASy Swiss-Prot
Match: Q38740 (Squamosa promoter-binding protein 2 OS=Antirrhinum majus OX=4151 GN=SBP2 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.6e-30
Identity = 76/147 (51.70%), Postives = 99/147 (67.35%), Query Frame = 0


Query: 15  SDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANSTNRGSGSGYAGGAA 74
           SD +EEEE E+EEEE+Q +  K    + F    +KKKK+     +    G     +GG  
Sbjct: 24  SDFEEEEEGEDEEEEEQERVVK----VNFAESQLKKKKLNLGEGSGGKSGEKHTASGGGV 83

Query: 75  AAS--CQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQQCSRFHGVEEFD 134
            A   C  +NC ADL + K+Y++RH+VCE HAKAPVV V G+ +RFCQQCSRFH + EFD
Sbjct: 84  VAQPCCLVENCGADLRNCKKYYQRHRVCEVHAKAPVVSVEGLMQRFCQQCSRFHDLSEFD 143

Query: 135 ESKRSCRKRLAGHNQRRRKSSSDVHGE 160
           ++KRSCR+RLAGHN+RRRKSS + H E
Sbjct: 144 QTKRSCRRRLAGHNERRRKSSLESHKE 166

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BLAST of Moc03g27020 vs. ExPASy Swiss-Prot
Match: P93015 (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3 PE=1 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28
Identity = 73/155 (47.10%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           M   KA+GKR L   ++ EEEEEEEE E++   +++         + ++KK+   A ++S
Sbjct: 3   MRRSKAEGKRSLR--ELSEEEEEEEETEDEDTFEEE---------EALEKKQKGKATSSS 62

Query: 61  TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ 120
                            CQ ++C AD+S +K+YH+RHKVC+ HAKAP V ++G+H+RFCQ
Sbjct: 63  ---------------GVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQ 122

Query: 121 QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSD 156
           QCSRFH + EFDE+KRSCR+RLAGHN+RRRKS++D
Sbjct: 123 QCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

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BLAST of Moc03g27020 vs. ExPASy Swiss-Prot
Match: Q6Z461 (Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL13 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-28
Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 53  IVTAAANSTNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVA 112
           +  AA     R  G   +GG     CQ + C  DLS + RY+RRHKVC++H+K PVV VA
Sbjct: 85  VAAAARRGAGRAGGGAPSGGGGGPRCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVA 144

Query: 113 GIHKRFCQQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSD-VHGES 161
           G+ +RFCQQCSRFH + EFD++KRSCR+RLAGHN+RRRKS++D  HGE+
Sbjct: 145 GLRQRFCQQCSRFHELTEFDDAKRSCRRRLAGHNERRRKSAADTAHGEN 193

[Close]

BLAST of Moc03g27020 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27
Identity = 73/157 (46.50%), Postives = 96/157 (61.15%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           M T K +GKR +      E+ EEE++                  G+  KK + +T +   
Sbjct: 1   MDTSKGEGKRVIKLPGSQEQGEEEDDI-----------------GEDSKKTRALTPSGKR 60

Query: 61  TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ 120
                    A G+   SCQ +NC A+++++K YHRRHKVCE HAKAPVV  +G+ +RFCQ
Sbjct: 61  ---------ASGSTQRSCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGLQQRFCQ 120

Query: 121 QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVH 158
           QCSRFH + EFDE+KRSCR+RLAGHN+RRRKSS D H
Sbjct: 121 QCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSHDTH 131

[Close]

BLAST of Moc03g27020 vs. ExPASy Swiss-Prot
Match: Q2R3Y1 (Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL19 PE=3 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27
Identity = 64/103 (62.14%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 56  AAANSTNR---GSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVA 115
           AAA +T R   GSG G  GG  A +C  D C +DLS  + YHRRHKVCE+HAK PVV VA
Sbjct: 68  AAAPATRRARGGSGGGGGGGGGAEACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVA 127

Query: 116 GIHKRFCQQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSD 156
           G  +RFCQQCSRFH + EFD+ K+SCRKRL GHN+RRRK   D
Sbjct: 128 GQEQRFCQQCSRFHNLAEFDDGKKSCRKRLDGHNRRRRKPQHD 170

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BLAST of Moc03g27020 vs. ExPASy TrEMBL
Match: A0A6J1CE17 (squamosa promoter-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111010642 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS
Sbjct: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60

Query: 61  TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ 120
           TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ
Sbjct: 61  TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ 120

Query: 121 QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 163
           QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST
Sbjct: 121 QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 162

[Close]

BLAST of Moc03g27020 vs. ExPASy TrEMBL
Match: A0A6J1K2Z2 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111490194 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 8.9e-55
Identity = 124/165 (75.15%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRLNY D +E+EEEEEEE+E    ++  DGELGFG D+ KKKKIV      
Sbjct: 1   MATGKADGKRRLNYYDTEEDEEEEEEEDE----EEDGDGELGFGEDFNKKKKIV--GGGG 60

Query: 61  TNRGSGSGYAGGAAAA-----SCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIH 120
           +N+GSGSGY G AAAA     SCQADNC+ADLS SKRYHRRHKVCE HAKAP V VAGIH
Sbjct: 61  SNKGSGSGYGGAAAAAVAVAPSCQADNCSADLSGSKRYHRRHKVCEFHAKAPAVVVAGIH 120

Query: 121 KRFCQQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGES 161
           +RFCQQCSRFHG+ EFD +KRSCRKRLAGHNQRRRKSSSDVHGES
Sbjct: 121 QRFCQQCSRFHGLMEFDLTKRSCRKRLAGHNQRRRKSSSDVHGES 159

[Close]

BLAST of Moc03g27020 vs. ExPASy TrEMBL
Match: A0A6J1EH14 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434224 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.0e-54
Identity = 125/163 (76.69%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRLNY DM+EEEEEEEEE E        DGELGFGGD+ KKKK + +   S
Sbjct: 1   MATGKADGKRRLNYYDMEEEEEEEEEEVE------VVDGELGFGGDFNKKKKTLCSGGGS 60

Query: 61  TNRGSGSGYAGGAAAA-SCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFC 120
            N+ SGSGY G A AA SCQADNCNADLSSSKRYH RHKVCE HAKA  V VAGIH+RFC
Sbjct: 61  -NKKSGSGYGGAATAAPSCQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFC 120

Query: 121 QQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 163
           QQCSRFHG++EFDE+KRSCRKRLAGHNQRRRKSSSDVHG +ST
Sbjct: 121 QQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDVHGGTST 156

[Close]

BLAST of Moc03g27020 vs. ExPASy TrEMBL
Match: A0A0A0LSD9 (Squamosa promoter-binding-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G074980 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.6e-54
Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRL+Y +M+EE+EE+EEE+E + Q+   D ELGF GD+ KKKKI T +  S
Sbjct: 1   MATGKADGKRRLSYYEMEEEDEEDEEEDEDEEQE--IDAELGFSGDFNKKKKIFT-SGGS 60

Query: 61  TNRGSGSGYAGGAAAA---SCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKR 120
           +N+ S S + G  AAA    CQADNCNADLSSSKRYHRRHKVCE HAKAPVVPV GI +R
Sbjct: 61  SNKKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTGIDQR 120

Query: 121 FCQQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 163
           FCQQCSRFHG++EFDE+KRSCRKRLAGHNQRRRKSSSD+HGESST
Sbjct: 121 FCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDLHGESST 162

[Close]

BLAST of Moc03g27020 vs. ExPASy TrEMBL
Match: A0A6J1KHJ1 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495800 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.4e-54
Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           MATGKADGKRRLNY DM+EEEEEEEE E         DGELGFGGD+ KKKK +++   S
Sbjct: 1   MATGKADGKRRLNYYDMEEEEEEEEEVE-------VVDGELGFGGDFNKKKKTLSSGGGS 60

Query: 61  TNRGSGSGYAGGAAAA-SCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFC 120
            N+ SGSGY G A AA SCQADNCNADLSSSKRYH RHKVCE HAKA  V VAGIH+RFC
Sbjct: 61  -NKKSGSGYGGAATAAPSCQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFC 120

Query: 121 QQCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSDVHGESST 163
           QQCSRFHG++EFDE+KRSCRKRLAGHNQRRRKSSSDVHG +ST
Sbjct: 121 QQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSSDVHGGTST 155

[Close]

BLAST of Moc03g27020 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 127.5 bits (319), Expect = 9.8e-30
Identity = 73/155 (47.10%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 1   MATGKADGKRRLNYSDMDEEEEEEEEEEEQQRQQDKADGELGFGGDYIKKKKIVTAAANS 60
           M   KA+GKR L   ++ EEEEEEEE E++   +++         + ++KK+   A ++S
Sbjct: 3   MRRSKAEGKRSLR--ELSEEEEEEEETEDEDTFEEE---------EALEKKQKGKATSSS 62

Query: 61  TNRGSGSGYAGGAAAASCQADNCNADLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQ 120
                            CQ ++C AD+S +K+YH+RHKVC+ HAKAP V ++G+H+RFCQ
Sbjct: 63  ---------------GVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQ 122

Query: 121 QCSRFHGVEEFDESKRSCRKRLAGHNQRRRKSSSD 156
           QCSRFH + EFDE+KRSCR+RLAGHN+RRRKS++D
Sbjct: 123 QCSRFHALSEFDEAKRSCRRRLAGHNERRRKSTTD 131

[Close]

BLAST of Moc03g27020 vs. TAIR 10
Match: AT3G15270.1 (squamosa promoter binding protein-like 5 )

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-28
Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 0


Query: 30  QQRQQDKADGELGFGGDYIKKKKIVTAAAN-STNRGSGSGYAGGAAAASCQADNCNADLS 89
           ++  ++  DGE   GGD  K+KK++      ST+R           +  CQ D C  +L+
Sbjct: 23  EEEMENGMDGEEEDGGDEDKRKKVMERVRGPSTDR---------VPSRLCQVDRCTVNLT 82

Query: 90  SSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQQCSRFHGVEEFDESKRSCRKRLAGHNQR 149
            +K+Y+RRH+VCE HAKA    VAG+ +RFCQQCSRFH + EFDE+KRSCR+RLAGHN+R
Sbjct: 83  EAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNER 142

Query: 150 RRKSSSDVHGESS 162
           RRK S D  GE S
Sbjct: 143 RRKISGDSFGEGS 146

[Close]

BLAST of Moc03g27020 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 120.9 bits (302), Expect = 9.2e-28
Identity = 67/137 (48.91%), Postives = 87/137 (63.50%), Query Frame = 0


Query: 38  DGELGFGGDYIKKKKIVTAAANSTN------------RGSGSGYAGGAAAASCQADNCNA 97
           +G+   G  Y+KKK  +      T+            RGS      G +   CQ D C A
Sbjct: 2   EGKRSQGQGYMKKKSYLVEEDMETDTDEEEEVGRDRVRGSRGSINRGGSLRLCQVDRCTA 61

Query: 98  DLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQQCSRFHGVEEFDESKRSCRKRLAGH 157
           D+  +K YHRRHKVCE HAKA  V ++G+++RFCQQCSRFH ++EFDE+KRSCR+RLAGH
Sbjct: 62  DMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGH 121

Query: 158 NQRRRKSSSD-VHGESS 162
           N+RRRKSS +  +GE S
Sbjct: 122 NERRRKSSGESTYGEGS 138

[Close]

BLAST of Moc03g27020 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 120.9 bits (302), Expect = 9.2e-28
Identity = 67/137 (48.91%), Postives = 87/137 (63.50%), Query Frame = 0


Query: 38  DGELGFGGDYIKKKKIVTAAANSTN------------RGSGSGYAGGAAAASCQADNCNA 97
           +G+   G  Y+KKK  +      T+            RGS      G +   CQ D C A
Sbjct: 2   EGKRSQGQGYMKKKSYLVEEDMETDTDEEEEVGRDRVRGSRGSINRGGSLRLCQVDRCTA 61

Query: 98  DLSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQQCSRFHGVEEFDESKRSCRKRLAGH 157
           D+  +K YHRRHKVCE HAKA  V ++G+++RFCQQCSRFH ++EFDE+KRSCR+RLAGH
Sbjct: 62  DMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGH 121

Query: 158 NQRRRKSSSD-VHGESS 162
           N+RRRKSS +  +GE S
Sbjct: 122 NERRRKSSGESTYGEGS 138

[Close]

BLAST of Moc03g27020 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 )

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-26
Identity = 68/136 (50.00%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 27  EEEQQRQQDKADGELGFGGDYIKKKKIVTAAANSTNRGSGSGYAGGAAAASCQADNCNAD 86
           EE+  +  D     L  GG+ I+   +       T  G G      + A  CQ DNC AD
Sbjct: 85  EEDNLKDDDAHRLTLNLGGNNIEGNGV-----KKTKLGGGI----PSRAICCQVDNCGAD 144

Query: 87  LSSSKRYHRRHKVCESHAKAPVVPVAGIHKRFCQQCSRFHGVEEFDESKRSCRKRLAGHN 146
           LS  K YHRRHKVCE H+KA    V GI +RFCQQCSRFH +EEFDE KRSCR+RLAGHN
Sbjct: 145 LSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHN 204

Query: 147 QRRRKSSSDVHGESST 163
           +RRRK++ D  G  ++
Sbjct: 205 KRRRKANPDTIGNGTS 211

The following BLAST results are available for this feature:

BLAST of Moc03g27020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139819.1	2.6e-80	100.00	squamosa promoter-binding protein 2-like [Momordica charantia]	[more]
XP_038894994.1	1.2e-58	77.44	squamosa promoter-binding-like protein 3 isoform X1 [Benincasa hispida]	[more]
XP_022994484.1	1.8e-54	75.15	squamosa promoter-binding-like protein 3 [Cucurbita maxima]	[more]
XP_022927387.1	4.1e-54	76.69	squamosa promoter-binding-like protein 3 isoform X1 [Cucurbita moschata] >KAG658...	[more]
XP_011653273.1	5.4e-54	73.33	squamosa promoter-binding-like protein 3 [Cucumis sativus] >KGN64693.1 hypotheti...	[more]

BLAST of Moc03g27020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38740	9.6e-30	51.70	Squamosa promoter-binding protein 2 OS=Antirrhinum majus OX=4151 GN=SBP2 PE=2 SV...	[more]
P93015	1.4e-28	47.10	Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3...	[more]
Q6Z461	1.8e-28	55.96	Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q38741	1.2e-27	46.50	Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV...	[more]
Q2R3Y1	1.2e-27	62.14	Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japoni...	[more]

BLAST of Moc03g27020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CE17	1.2e-80	100.00	squamosa promoter-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1K2Z2	8.9e-55	75.15	Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114901...	[more]
A0A6J1EH14	2.0e-54	76.69	Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A0A0LSD9	2.6e-54	73.33	Squamosa promoter-binding-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G07498...	[more]
A0A6J1KHJ1	3.4e-54	76.07	Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114958...	[more]

BLAST of Moc03g27020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33810.1	9.8e-30	47.10	squamosa promoter binding protein-like 3	[more]
AT3G15270.1	5.4e-28	49.62	squamosa promoter binding protein-like 5	[more]
AT1G53160.2	9.2e-28	48.91	squamosa promoter binding protein-like 4	[more]
AT1G53160.1	9.2e-28	48.91	squamosa promoter binding protein-like 4	[more]
AT3G60030.1	6.6e-26	50.00	squamosa promoter-binding protein-like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..162
None	No IPR available	PANTHER	PTHR31251:SF134	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3	coord: 20..155
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 78..151 e-value: 8.7E-32 score: 109.3
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 75..152 score: 31.350723
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 68..139 e-value: 5.9E-33 score: 114.8
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 77..156
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 20..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g27020.1	Moc03g27020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding