Moc03g26680 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g26680
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
Location	chr3: 19199783 .. 19200331 (-)
RNA-Seq Expression	Moc03g26680
Synteny	Moc03g26680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACCGAAGCCAGAAAAGATTCCACGGAAGCAGCTGGGTCATCGTCGTCGATGAGGCCCGGCGCGGCGGCGGATCACCCGACGACGGCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGAGACTGGAACACGTTCGGGCAGTATCTGAAAAATCAAACGCCGCCGGTGGCGCTGTCCCAGTGCAACTGCAATCACGTGCTGGAATTTCTCCGGTACCTGGACCAGTTCGGGAAGACCAAGGTTCACTTACCCGGGTGCGTGTTCTTCGGGCAGCCCGACCCGCCCGCCCCGTGTACCTGCCCGCTCCGCCAGGCCTGGGGCAGCCTCGACGCGCTGATCGGACGCCTCCGAGCCGCCTACGAGGAGCACGGCGGATCGCCGGAGACCAACCCCTTCGGAAATGGAGCAATCAGAGTTTATTTACGCGAAGTGAAGGAGTGTCAGGCAAAAGCAAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGAGCCCAATTGAAGCCCAATAACGATGATCATCAAGATCACAAAAATCACCTACCTTAA

mRNA sequence

ATGTCAACCGAAGCCAGAAAAGATTCCACGGAAGCAGCTGGGTCATCGTCGTCGATGAGGCCCGGCGCGGCGGCGGATCACCCGACGACGGCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGAGACTGGAACACGTTCGGGCAGTATCTGAAAAATCAAACGCCGCCGGTGGCGCTGTCCCAGTGCAACTGCAATCACGTGCTGGAATTTCTCCGGTACCTGGACCAGTTCGGGAAGACCAAGGTTCACTTACCCGGGTGCGTGTTCTTCGGGCAGCCCGACCCGCCCGCCCCGTGTACCTGCCCGCTCCGCCAGGCCTGGGGCAGCCTCGACGCGCTGATCGGACGCCTCCGAGCCGCCTACGAGGAGCACGGCGGATCGCCGGAGACCAACCCCTTCGGAAATGGAGCAATCAGAGTTTATTTACGCGAAGTGAAGGAGTGTCAGGCAAAAGCAAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGAGCCCAATTGAAGCCCAATAACGATGATCATCAAGATCACAAAAATCACCTACCTTAA

Coding sequence (CDS)

ATGTCAACCGAAGCCAGAAAAGATTCCACGGAAGCAGCTGGGTCATCGTCGTCGATGAGGCCCGGCGCGGCGGCGGATCACCCGACGACGGCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGAGACTGGAACACGTTCGGGCAGTATCTGAAAAATCAAACGCCGCCGGTGGCGCTGTCCCAGTGCAACTGCAATCACGTGCTGGAATTTCTCCGGTACCTGGACCAGTTCGGGAAGACCAAGGTTCACTTACCCGGGTGCGTGTTCTTCGGGCAGCCCGACCCGCCCGCCCCGTGTACCTGCCCGCTCCGCCAGGCCTGGGGCAGCCTCGACGCGCTGATCGGACGCCTCCGAGCCGCCTACGAGGAGCACGGCGGATCGCCGGAGACCAACCCCTTCGGAAATGGAGCAATCAGAGTTTATTTACGCGAAGTGAAGGAGTGTCAGGCAAAAGCAAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGAGCCCAATTGAAGCCCAATAACGATGATCATCAAGATCACAAAAATCACCTACCTTAA

Protein sequence

MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNHLP

Homology

[Close]

BLAST of Moc03g26680 vs. NCBI nr
Match: XP_022140104.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia] >XP_022140105.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia])

HSP 1 Score: 379.4 bits (973), Expect = 1.7e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60
           MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS
Sbjct: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60

Query: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120
           QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH 180
           YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH
Sbjct: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Moc03g26680 vs. NCBI nr
Match: XP_038896042.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida] >XP_038896043.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 8.9e-82
Identity = 156/180 (86.67%), Postives = 160/180 (88.89%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60
           MSTE RKDST  AGSSS    G      TTALSRYESQKRRDWNTFGQYLKNQTPPV LS
Sbjct: 1   MSTEGRKDSTTEAGSSSRTAAGT-----TTALSRYESQKRRDWNTFGQYLKNQTPPVPLS 60

Query: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120
           QCNCNHVLEFLRYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  QCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH 180
           YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR QLK N+DD+ +  N+
Sbjct: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDDDNNNINNN 175

[Close]

BLAST of Moc03g26680 vs. NCBI nr
Match: XP_023000826.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima])

HSP 1 Score: 310.5 bits (794), Expect = 9.9e-81
Identity = 156/179 (87.15%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPG--AAAD--HPTTALSRYESQKRRDWNTFGQYLKNQTPP 60
           MSTE RKDSTE AGSSS    G  AAAD    + ALSRYESQK+RDWNTFGQYLKNQTPP
Sbjct: 1   MSTEGRKDSTE-AGSSSRTAAGSSAAADQQQASAALSRYESQKKRDWNTFGQYLKNQTPP 60

Query: 61  VALSQCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120
           VALSQCNCNHV+EF+RYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGR
Sbjct: 61  VALSQCNCNHVVEFMRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQ 176
           LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR+QLK N++D+Q
Sbjct: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRSQLKGNDEDNQ 178

[Close]

BLAST of Moc03g26680 vs. NCBI nr
Match: XP_008465553.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_016903415.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80
Identity = 156/188 (82.98%), Postives = 161/188 (85.64%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60
           MSTEARKD TEA  SS +          T ALSRYESQKRRDWNTFGQYLKNQTPPV+LS
Sbjct: 1   MSTEARKDPTEAGSSSRT------TTTTTAALSRYESQKRRDWNTFGQYLKNQTPPVSLS 60

Query: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120
           QCNCNHVLEFLRYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  QCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKN- 180
           YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR QLK N+DD  ++ N 
Sbjct: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDDDINNNNNN 180

Query: 181 -----HLP 183
                HLP
Sbjct: 181 KQPIKHLP 182

[Close]

BLAST of Moc03g26680 vs. NCBI nr
Match: KAA0057039.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa])

HSP 1 Score: 308.5 bits (789), Expect = 3.8e-80
Identity = 153/180 (85.00%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60
           MSTEARKD TEA  SS +          T ALSRYESQKRRDWNTFGQYLKNQTPPV+LS
Sbjct: 1   MSTEARKDPTEAGSSSRT------TTTTTAALSRYESQKRRDWNTFGQYLKNQTPPVSLS 60

Query: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120
           QCNCNHVLEFLRYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  QCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH 180
           YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR QLK N+DD  ++ N+
Sbjct: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDDDINNNNNN 174

[Close]

BLAST of Moc03g26680 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 9.0e-69
Identity = 116/142 (81.69%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 23  AAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVLEFLRYLDQFGKTKV 82
           ++   P    SRYESQKRRDWNTFGQYLKNQ PPV +S C+CNHVL+FLRYLDQFGKTKV
Sbjct: 14  SSGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKV 73

Query: 83  HLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYL 142
           H+PGC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPF +GAIRVYL
Sbjct: 74  HVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYL 133

Query: 143 REVKECQAKARGIPYKKKKRKR 165
           REV+ECQAKARGIPYKKKK+K+
Sbjct: 134 REVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Moc03g26680 vs. ExPASy Swiss-Prot
Match: Q9SN52 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LSH9 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.0e-61
Identity = 114/161 (70.81%), Postives = 129/161 (80.12%), Query Frame = 0


Query: 7   KDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNH 66
           KD  +   SSS+         P   LSRYESQKRRDWNTF QYLK+Q PP+ +SQ +  H
Sbjct: 10  KDPPDHPSSSSNHHKQPLPPQPQQPLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTH 69

Query: 67  VLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEH-G 126
           VL FLRYLDQFGKTKVH   CVFFGQPDPP PCTCPL+QAWGSLDALIGRLRAAYEEH G
Sbjct: 70  VLSFLRYLDQFGKTKVHHQACVFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGG 129

Query: 127 GSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQ 167
           GSP+TNPF NG+IRV+LREV+E QAKARGIPY+KKKR++ +
Sbjct: 130 GSPDTNPFANGSIRVHLREVRESQAKARGIPYRKKKRRKTK 170

[Close]

BLAST of Moc03g26680 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-60
Identity = 111/158 (70.25%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 9   STEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVL 68
           S+ AAG + ++   AAA  P   LSRYESQKRRDWNTF QYL+N  PP+ L++C+  HV+
Sbjct: 9   SSAAAGGAPAV---AAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVI 68

Query: 69  EFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSP 128
           EFLRYLDQFGKTKVH  GC F+GQP PP PC CPLRQAWGSLDALIGRLRAAYEE GG+P
Sbjct: 69  EFLRYLDQFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTP 128

Query: 129 ETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQ 167
           E+NPF   A+R+YLREV++ QAKARGIPY+KKKRKR+Q
Sbjct: 129 ESNPFAARAVRIYLREVRDSQAKARGIPYEKKKRKRSQ 163

[Close]

BLAST of Moc03g26680 vs. ExPASy Swiss-Prot
Match: Q941W1 (Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-60
Identity = 111/158 (70.25%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 9   STEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVL 68
           S+ AAG + ++   AAA  P   LSRYESQKRRDWNTF QYL+N  PP+ L++C+  HV+
Sbjct: 9   SSAAAGGAPAV---AAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVI 68

Query: 69  EFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSP 128
           EFLRYLDQFGKTKVH  GC F+GQP PP PC CPLRQAWGSLDALIGRLRAAYEE GG+P
Sbjct: 69  EFLRYLDQFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTP 128

Query: 129 ETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQ 167
           E+NPF   A+R+YLREV++ QAKARGIPY+KKKRKR+Q
Sbjct: 129 ESNPFAARAVRIYLREVRDSQAKARGIPYEKKKRKRSQ 163

[Close]

BLAST of Moc03g26680 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.7e-59
Identity = 112/156 (71.79%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 9   STEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVL 68
           +T    SSSS   G +    T  LSRYE+QKRRDWNTFGQYL+N  PP++LS+C+  HVL
Sbjct: 26  TTTTTSSSSSSSSGGSG---TNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVL 85

Query: 69  EFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSP 128
           EFLRYLDQFGKTKVH   C FFG P+PPAPC CPLRQAWGSLDALIGRLRAA+EE+GGSP
Sbjct: 86  EFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSP 145

Query: 129 ETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR 165
           ETNPFG  A+R+YLREV++ QAKARGI Y+KKKRKR
Sbjct: 146 ETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of Moc03g26680 vs. ExPASy TrEMBL
Match: A0A6J1CET4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Momordica charantia OX=3673 GN=LOC111010841 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 8.4e-102
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60
           MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS
Sbjct: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60

Query: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120
           QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH 180
           YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH
Sbjct: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH 180

Query: 181 LP 183
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Moc03g26680 vs. ExPASy TrEMBL
Match: A0A6J1KGX1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111495158 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.8e-81
Identity = 156/179 (87.15%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPG--AAAD--HPTTALSRYESQKRRDWNTFGQYLKNQTPP 60
           MSTE RKDSTE AGSSS    G  AAAD    + ALSRYESQK+RDWNTFGQYLKNQTPP
Sbjct: 1   MSTEGRKDSTE-AGSSSRTAAGSSAAADQQQASAALSRYESQKKRDWNTFGQYLKNQTPP 60

Query: 61  VALSQCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120
           VALSQCNCNHV+EF+RYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGR
Sbjct: 61  VALSQCNCNHVVEFMRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGR 120

Query: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQ 176
           LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR+QLK N++D+Q
Sbjct: 121 LRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRSQLKGNDEDNQ 178

[Close]

BLAST of Moc03g26680 vs. ExPASy TrEMBL
Match: A0A1S4E614 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103503180 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 156/188 (82.98%), Postives = 161/188 (85.64%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60
           MSTEARKD TEA  SS +          T ALSRYESQKRRDWNTFGQYLKNQTPPV+LS
Sbjct: 1   MSTEARKDPTEAGSSSRT------TTTTTAALSRYESQKRRDWNTFGQYLKNQTPPVSLS 60

Query: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120
           QCNCNHVLEFLRYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  QCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKN- 180
           YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR QLK N+DD  ++ N 
Sbjct: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDDDINNNNNN 180

Query: 181 -----HLP 183
                HLP
Sbjct: 181 KQPIKHLP 182

[Close]

BLAST of Moc03g26680 vs. ExPASy TrEMBL
Match: A0A5A7UU18 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002260 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.8e-80
Identity = 153/180 (85.00%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALS 60
           MSTEARKD TEA  SS +          T ALSRYESQKRRDWNTFGQYLKNQTPPV+LS
Sbjct: 1   MSTEARKDPTEAGSSSRT------TTTTTAALSRYESQKRRDWNTFGQYLKNQTPPVSLS 60

Query: 61  QCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120
           QCNCNHVLEFLRYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  QCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDHQDHKNH 180
           YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR QLK N+DD  ++ N+
Sbjct: 121 YEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDDDINNNNNN 174

[Close]

BLAST of Moc03g26680 vs. ExPASy TrEMBL
Match: A0A6J1EJZ8 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111434007 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80
Identity = 155/181 (85.64%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   MSTEARKDSTEAAGSSSSMRPG--AAAD----HPTTALSRYESQKRRDWNTFGQYLKNQT 60
           MSTE RKDSTE  GSSS    G  AAAD      + ALSRYESQK+RDWNTFGQYLKNQT
Sbjct: 2   MSTEGRKDSTE-GGSSSRTAAGSSAAADQQQQQTSAALSRYESQKKRDWNTFGQYLKNQT 61

Query: 61  PPVALSQCNCNHVLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALI 120
           PPVALSQCNCNHV+EF+RYLDQFGKTKVHL GCVFFGQPDPPAPCTCPLRQAWGSLDALI
Sbjct: 62  PPVALSQCNCNHVVEFMRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALI 121

Query: 121 GRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQLKPNNDDH 176
           GRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR+QLK N +D+
Sbjct: 122 GRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRSQLKGNEEDN 181

[Close]

BLAST of Moc03g26680 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 261.2 bits (666), Expect = 6.4e-70
Identity = 116/142 (81.69%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 23  AAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVLEFLRYLDQFGKTKV 82
           ++   P    SRYESQKRRDWNTFGQYLKNQ PPV +S C+CNHVL+FLRYLDQFGKTKV
Sbjct: 14  SSGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKV 73

Query: 83  HLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYL 142
           H+PGC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPF +GAIRVYL
Sbjct: 74  HVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYL 133

Query: 143 REVKECQAKARGIPYKKKKRKR 165
           REV+ECQAKARGIPYKKKK+K+
Sbjct: 134 REVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Moc03g26680 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 261.2 bits (666), Expect = 6.4e-70
Identity = 116/142 (81.69%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 23  AAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVLEFLRYLDQFGKTKV 82
           ++   P    SRYESQKRRDWNTFGQYLKNQ PPV +S C+CNHVL+FLRYLDQFGKTKV
Sbjct: 14  SSGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKV 73

Query: 83  HLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYL 142
           H+PGC+F+GQP+PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPF +GAIRVYL
Sbjct: 74  HVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYL 133

Query: 143 REVKECQAKARGIPYKKKKRKR 165
           REV+ECQAKARGIPYKKKK+K+
Sbjct: 134 REVRECQAKARGIPYKKKKKKK 155

[Close]

BLAST of Moc03g26680 vs. TAIR 10
Match: AT4G18610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 234.6 bits (597), Expect = 6.4e-62
Identity = 114/161 (70.81%), Postives = 129/161 (80.12%), Query Frame = 0


Query: 7   KDSTEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNH 66
           KD  +   SSS+         P   LSRYESQKRRDWNTF QYLK+Q PP+ +SQ +  H
Sbjct: 10  KDPPDHPSSSSNHHKQPLPPQPQQPLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTH 69

Query: 67  VLEFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEH-G 126
           VL FLRYLDQFGKTKVH   CVFFGQPDPP PCTCPL+QAWGSLDALIGRLRAAYEEH G
Sbjct: 70  VLSFLRYLDQFGKTKVHHQACVFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGG 129

Query: 127 GSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRAQ 167
           GSP+TNPF NG+IRV+LREV+E QAKARGIPY+KKKR++ +
Sbjct: 130 GSPDTNPFANGSIRVHLREVRESQAKARGIPYRKKKRRKTK 170

[Close]

BLAST of Moc03g26680 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 230.3 bits (586), Expect = 1.2e-60
Identity = 112/156 (71.79%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 9   STEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVL 68
           +T    SSSS   G +    T  LSRYE+QKRRDWNTFGQYL+N  PP++LS+C+  HVL
Sbjct: 26  TTTTTSSSSSSSSGGSG---TNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVL 85

Query: 69  EFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSP 128
           EFLRYLDQFGKTKVH   C FFG P+PPAPC CPLRQAWGSLDALIGRLRAA+EE+GGSP
Sbjct: 86  EFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSP 145

Query: 129 ETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR 165
           ETNPFG  A+R+YLREV++ QAKARGI Y+KKKRKR
Sbjct: 146 ETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of Moc03g26680 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-58
Identity = 104/156 (66.67%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 9   STEAAGSSSSMRPGAAADHPTTALSRYESQKRRDWNTFGQYLKNQTPPVALSQCNCNHVL 68
           S   A    + +P +++  P+   SRYE+QKRRDWNTFGQYL+N  PP++LS+C+  HVL
Sbjct: 29  SVTGATGGEATQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVL 88

Query: 69  EFLRYLDQFGKTKVHLPGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSP 128
           EFLRYLDQFGKTKVH   C F+G P+PPAPC CPLRQAWGSLDALIGRLRAA+EE+GG P
Sbjct: 89  EFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKP 148

Query: 129 ETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKR 165
           ETNPFG  A+R+YLREV++ Q+KARG+ Y+KKKRKR
Sbjct: 149 ETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKR 184

The following BLAST results are available for this feature:

BLAST of Moc03g26680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140104.1	1.7e-101	100.00	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia] >XP_02214...	[more]
XP_038896042.1	8.9e-82	86.67	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida] >XP_0388960...	[more]
XP_023000826.1	9.9e-81	87.15	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima]	[more]
XP_008465553.1	2.2e-80	82.98	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_0...	[more]
KAA0057039.1	3.8e-80	85.00	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa]	[more]

BLAST of Moc03g26680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7R3	9.0e-69	81.69	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9SN52	9.0e-61	70.81	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XED8	1.5e-60	70.25	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1	[more]
Q941W1	1.5e-60	70.25	Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1	[more]
Q9LW68	1.7e-59	71.79	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]

BLAST of Moc03g26680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CET4	8.4e-102	100.00	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1KGX1	4.8e-81	87.15	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S4E614	1.1e-80	82.98	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7UU18	1.8e-80	85.00	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1EJZ8	3.1e-80	85.64	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Moc03g26680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42610.1	6.4e-70	81.69	Protein of unknown function (DUF640)	[more]
AT2G42610.2	6.4e-70	81.69	Protein of unknown function (DUF640)	[more]
AT4G18610.1	6.4e-62	70.81	Protein of unknown function (DUF640)	[more]
AT3G23290.2	1.2e-60	71.79	Protein of unknown function (DUF640)	[more]
AT2G31160.1	1.1e-58	66.67	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 26..147 e-value: 2.7E-64 score: 215.0
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 34..161 score: 79.416801
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR31165:SF9	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 3..174
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 3..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g26680.1	Moc03g26680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus