Moc03g26510 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g26510
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Rho_N domain-containing protein
Location	chr3: 19099844 .. 19100921 (+)
RNA-Seq Expression	Moc03g26510
Synteny	Moc03g26510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCAGTAGTTTTCCAGTCTCGAACTCTACGCTTTCCCAATTTGGTCTCTTTTGGAAGGAGACCCATTTTCGCTTTGAAAGGTATGGCCTATGGGGCTTCTTCTTCCTTGCCTTCCCCATTCCCACAAAACCCATCTTCTTAAATTGAACAACTTCTGTTGCAGCTGTGCCCGAGGGCTAAATCTTGTGTGGTTCACAAGCTGAGGGATTAATTTTTGATGCAGCTTGTTAAATTTGGCAGAGATTGCAGCTGTGAATTCTAGCAAGGGAATTCAAGTATCTGTTACGAGCAATGGGGGTGGAAATGCAGGGCAACGGCCTCCCCGTAGAAGTTCTGGGCCAGGAAGGACCAGAAAGAATGAACCCAATAGAAACGAGGCAGCTGAAGACCTAAAAAATCCCAAATCAAATAACCAGGAGGAGATAATTGCTCTCTTCAGAAAGATTCAGACTTCCATTGCCAAGGACTCTGCAACCACCAAAGATGAAGATTCCCACGAGGATGAGATTGGAGCCGAGTCTATTTTGGAGAGTCTTCGTGAATCAAGGAAGCAAGTCAAAGGTAATTTCTTGGTTGTCTCATCTCATCTCATCTGATGCTTTTGAGGGAAATTTGTCCCACATTTCAAAACCCATGAATGAATCTCGCAAGAACAAAATTCAAGTTATGATTAACGAATTTCTATCTCCCATATCTTTATTAATTAAATCAACACATTGGGGGCAATGGCAGGCAGAACTTCAAAGAAGGCAGGAGTTAAAGTGTTGAGAAGAAAGGGCATCTCTGAAGAGCCGGAAATGTATCATACTTCGCCAGCAGCAGAATTCAAGTTAGTTCGACCACCATCTAAATTCGTGAAGAGATCACCAATCCCATCTCCCCCAGGAAGAAATGGTTCACGATCACAGCTTAGGGAGGAGCCTTCTCAGGCCATAGCTGAAAGCAGGGAAATGAAGTTCCCAAGTGTAGAGAATATGAAGCTTACCGAGCTGAAAGCAGTAGCAAAATCTAGAGGAATTAAGGGTTATTCCAAATTGAAGAAAAATGAGCTCCTGGAACTTCTGAGATCCTAA

mRNA sequence

ATGGAGGCAGTAGTTTTCCAGTCTCGAACTCTACGCTTTCCCAATTTGGTCTCTTTTGGAAGGAGACCCATTTTCGCTTTGAAAGAGATTGCAGCTGTGAATTCTAGCAAGGGAATTCAAGTATCTGTTACGAGCAATGGGGGTGGAAATGCAGGGCAACGGCCTCCCCGTAGAAGTTCTGGGCCAGGAAGGACCAGAAAGAATGAACCCAATAGAAACGAGGCAGCTGAAGACCTAAAAAATCCCAAATCAAATAACCAGGAGGAGATAATTGCTCTCTTCAGAAAGATTCAGACTTCCATTGCCAAGGACTCTGCAACCACCAAAGATGAAGATTCCCACGAGGATGAGATTGGAGCCGAGTCTATTTTGGAGAGTCTTCGTGAATCAAGGAAGCAAGTCAAAGGCAGAACTTCAAAGAAGGCAGGAGTTAAAGTGTTGAGAAGAAAGGGCATCTCTGAAGAGCCGGAAATGTATCATACTTCGCCAGCAGCAGAATTCAAGTTAGTTCGACCACCATCTAAATTCGTGAAGAGATCACCAATCCCATCTCCCCCAGGAAGAAATGGTTCACGATCACAGCTTAGGGAGGAGCCTTCTCAGGCCATAGCTGAAAGCAGGGAAATGAAGTTCCCAAGTGTAGAGAATATGAAGCTTACCGAGCTGAAAGCAGTAGCAAAATCTAGAGGAATTAAGGGTTATTCCAAATTGAAGAAAAATGAGCTCCTGGAACTTCTGAGATCCTAA

Coding sequence (CDS)

ATGGAGGCAGTAGTTTTCCAGTCTCGAACTCTACGCTTTCCCAATTTGGTCTCTTTTGGAAGGAGACCCATTTTCGCTTTGAAAGAGATTGCAGCTGTGAATTCTAGCAAGGGAATTCAAGTATCTGTTACGAGCAATGGGGGTGGAAATGCAGGGCAACGGCCTCCCCGTAGAAGTTCTGGGCCAGGAAGGACCAGAAAGAATGAACCCAATAGAAACGAGGCAGCTGAAGACCTAAAAAATCCCAAATCAAATAACCAGGAGGAGATAATTGCTCTCTTCAGAAAGATTCAGACTTCCATTGCCAAGGACTCTGCAACCACCAAAGATGAAGATTCCCACGAGGATGAGATTGGAGCCGAGTCTATTTTGGAGAGTCTTCGTGAATCAAGGAAGCAAGTCAAAGGCAGAACTTCAAAGAAGGCAGGAGTTAAAGTGTTGAGAAGAAAGGGCATCTCTGAAGAGCCGGAAATGTATCATACTTCGCCAGCAGCAGAATTCAAGTTAGTTCGACCACCATCTAAATTCGTGAAGAGATCACCAATCCCATCTCCCCCAGGAAGAAATGGTTCACGATCACAGCTTAGGGAGGAGCCTTCTCAGGCCATAGCTGAAAGCAGGGAAATGAAGTTCCCAAGTGTAGAGAATATGAAGCTTACCGAGCTGAAAGCAGTAGCAAAATCTAGAGGAATTAAGGGTTATTCCAAATTGAAGAAAAATGAGCTCCTGGAACTTCTGAGATCCTAA

Protein sequence

MEAVVFQSRTLRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSSGPGRTRKNEPNRNEAAEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS

Homology

[Close]

BLAST of Moc03g26510 vs. NCBI nr
Match: XP_022139843.1 (uncharacterized protein LOC111010657 isoform X2 [Momordica charantia])

HSP 1 Score: 458.4 bits (1178), Expect = 4.0e-125
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MEAVVFQSRTLRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSS 60
           MEAVVFQSRTLRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSS
Sbjct: 1   MEAVVFQSRTLRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSS 60

Query: 61  GPGRTRKNEPNRNEAAEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGA 120
           GPGRTRKNEPNRNEAAEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGA
Sbjct: 61  GPGRTRKNEPNRNEAAEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGA 120

Query: 121 ESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRS 180
           ESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRS
Sbjct: 121 ESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRS 180

Query: 181 PIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKN 240
           PIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKN
Sbjct: 181 PIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKN 240

Query: 241 ELLELLRS 249
           ELLELLRS
Sbjct: 241 ELLELLRS 248

[Close]

BLAST of Moc03g26510 vs. NCBI nr
Match: XP_022139842.1 (uncharacterized protein LOC111010657 isoform X1 [Momordica charantia])

HSP 1 Score: 405.6 bits (1041), Expect = 3.1e-109
Identity = 221/222 (99.55%), Postives = 221/222 (99.55%), Query Frame = 0


Query: 27  LKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSSGPGRTRKNEPNRNEAAEDLKNPKSNN 86
           L EIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSSGPGRTRKNEPNRNEAAEDLKNPKSNN
Sbjct: 48  LAEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSSGPGRTRKNEPNRNEAAEDLKNPKSNN 107

Query: 87  QEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKV 146
           QEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKV
Sbjct: 108 QEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKV 167

Query: 147 LRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAES 206
           LRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAES
Sbjct: 168 LRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAES 227

Query: 207 REMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 249
           REMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS
Sbjct: 228 REMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 269

[Close]

BLAST of Moc03g26510 vs. NCBI nr
Match: XP_038893912.1 (SAP-like protein BP-73 isoform X3 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 5.0e-75
Identity = 180/260 (69.23%), Postives = 209/260 (80.38%), Query Frame = 0


Query: 1   MEAVVFQSRTL-RFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSN-GGGNAGQRPPRR 60
           MEAV+FQ R L RFP LVS GRRP FA K+IA V  SKGIQ+SV++N   G AG RPPRR
Sbjct: 1   MEAVIFQPRILIRFPKLVSLGRRPTFASKDIADVYPSKGIQLSVSNNRPDGKAGNRPPRR 60

Query: 61  SSGPGRTRKNEPN--RNEA---AEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDS 120
            S PG+TRKNEP+  + EA    EDLK  K NNQEEIIALFRKI+TSIAK+SA++ DE+S
Sbjct: 61  ISAPGKTRKNEPSSRKTEAHMNEEDLKKSKYNNQEEIIALFRKIETSIAKESASSNDEES 120

Query: 121 HEDEIGAESILESLRESRKQVK----GRTSKKAGVKVLRRKGISEEPEMYHTS-PAAEFK 180
            +DE GAESILE+LRESRKQVK    G++SKKAG K LR +G SEE E++  S PAA+F+
Sbjct: 121 CKDEHGAESILETLRESRKQVKELWTGKSSKKAGAKALRSEGTSEEKEIHDPSPPAADFQ 180

Query: 181 LVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKS 240
           LVRPPSKFVKRSPIPSPP  NGS    R + +QAIAESRE+KFPS++NMKLTELKA+AKS
Sbjct: 181 LVRPPSKFVKRSPIPSPPRGNGSHP--RVDATQAIAESRELKFPSIKNMKLTELKALAKS 240

Query: 241 RGIKGYSKLKKNELLELLRS 249
           RGIKGYSKLKKNEL+ELL S
Sbjct: 241 RGIKGYSKLKKNELIELLGS 258

[Close]

BLAST of Moc03g26510 vs. NCBI nr
Match: XP_038893911.1 (SAP-like protein BP-73 isoform X2 [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 4.6e-73
Identity = 180/277 (64.98%), Postives = 209/277 (75.45%), Query Frame = 0


Query: 1   MEAVVFQSRTL-RFPNLVSFGRRPIFA---------------------LKEIAAVNSSKG 60
           MEAV+FQ R L RFP LVS GRRP FA                     L +IA V  SKG
Sbjct: 1   MEAVIFQPRILIRFPKLVSLGRRPTFASKGIEPEIVLNFANPLFNLLNLADIADVYPSKG 60

Query: 61  IQVSVTSN-GGGNAGQRPPRRSSGPGRTRKNEPN--RNEA---AEDLKNPKSNNQEEIIA 120
           IQ+SV++N   G AG RPPRR S PG+TRKNEP+  + EA    EDLK  K NNQEEIIA
Sbjct: 61  IQLSVSNNRPDGKAGNRPPRRISAPGKTRKNEPSSRKTEAHMNEEDLKKSKYNNQEEIIA 120

Query: 121 LFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKVLRRKGI 180
           LFRKI+TSIAK+SA++ DE+S +DE GAESILE+LRESRKQVKG++SKKAG K LR +G 
Sbjct: 121 LFRKIETSIAKESASSNDEESCKDEHGAESILETLRESRKQVKGKSSKKAGAKALRSEGT 180

Query: 181 SEEPEMYHTS-PAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAESREMKF 240
           SEE E++  S PAA+F+LVRPPSKFVKRSPIPSPP  NGS    R + +QAIAESRE+KF
Sbjct: 181 SEEKEIHDPSPPAADFQLVRPPSKFVKRSPIPSPPRGNGSHP--RVDATQAIAESRELKF 240

Query: 241 PSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 249
           PS++NMKLTELKA+AKSRGIKGYSKLKKNEL+ELL S
Sbjct: 241 PSIKNMKLTELKALAKSRGIKGYSKLKKNELIELLGS 275

[Close]

BLAST of Moc03g26510 vs. NCBI nr
Match: XP_038893910.1 (SAP-like protein BP-73 isoform X1 [Benincasa hispida])

HSP 1 Score: 279.6 bits (714), Expect = 2.5e-71
Identity = 180/281 (64.06%), Postives = 209/281 (74.38%), Query Frame = 0


Query: 1   MEAVVFQSRTL-RFPNLVSFGRRPIFA---------------------LKEIAAVNSSKG 60
           MEAV+FQ R L RFP LVS GRRP FA                     L +IA V  SKG
Sbjct: 1   MEAVIFQPRILIRFPKLVSLGRRPTFASKGIEPEIVLNFANPLFNLLNLADIADVYPSKG 60

Query: 61  IQVSVTSN-GGGNAGQRPPRRSSGPGRTRKNEPN--RNEA---AEDLKNPKSNNQEEIIA 120
           IQ+SV++N   G AG RPPRR S PG+TRKNEP+  + EA    EDLK  K NNQEEIIA
Sbjct: 61  IQLSVSNNRPDGKAGNRPPRRISAPGKTRKNEPSSRKTEAHMNEEDLKKSKYNNQEEIIA 120

Query: 121 LFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVK----GRTSKKAGVKVLR 180
           LFRKI+TSIAK+SA++ DE+S +DE GAESILE+LRESRKQVK    G++SKKAG K LR
Sbjct: 121 LFRKIETSIAKESASSNDEESCKDEHGAESILETLRESRKQVKELWTGKSSKKAGAKALR 180

Query: 181 RKGISEEPEMYHTS-PAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAESR 240
            +G SEE E++  S PAA+F+LVRPPSKFVKRSPIPSPP  NGS    R + +QAIAESR
Sbjct: 181 SEGTSEEKEIHDPSPPAADFQLVRPPSKFVKRSPIPSPPRGNGSHP--RVDATQAIAESR 240

Query: 241 EMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 249
           E+KFPS++NMKLTELKA+AKSRGIKGYSKLKKNEL+ELL S
Sbjct: 241 ELKFPSIKNMKLTELKALAKSRGIKGYSKLKKNELIELLGS 279

[Close]

BLAST of Moc03g26510 vs. ExPASy Swiss-Prot
Match: Q8L4E7 (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05
Identity = 23/35 (65.71%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 212 PSVENMKLTELKAVAKSRGIKGYSKLKKNELLELL 247
           P +  +K+TEL+ +AKSRGIKGYSK+KKN+L+ELL
Sbjct: 337 PDLSTLKVTELRELAKSRGIKGYSKMKKNDLVELL 371

[Close]

BLAST of Moc03g26510 vs. ExPASy TrEMBL
Match: A0A6J1CGN3 (uncharacterized protein LOC111010657 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010657 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.9e-125
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MEAVVFQSRTLRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSS 60
           MEAVVFQSRTLRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSS
Sbjct: 1   MEAVVFQSRTLRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSS 60

Query: 61  GPGRTRKNEPNRNEAAEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGA 120
           GPGRTRKNEPNRNEAAEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGA
Sbjct: 61  GPGRTRKNEPNRNEAAEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGA 120

Query: 121 ESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRS 180
           ESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRS
Sbjct: 121 ESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRS 180

Query: 181 PIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKN 240
           PIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKN
Sbjct: 181 PIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKN 240

Query: 241 ELLELLRS 249
           ELLELLRS
Sbjct: 241 ELLELLRS 248

[Close]

BLAST of Moc03g26510 vs. ExPASy TrEMBL
Match: A0A6J1CF22 (uncharacterized protein LOC111010657 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010657 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.5e-109
Identity = 221/222 (99.55%), Postives = 221/222 (99.55%), Query Frame = 0


Query: 27  LKEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSSGPGRTRKNEPNRNEAAEDLKNPKSNN 86
           L EIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSSGPGRTRKNEPNRNEAAEDLKNPKSNN
Sbjct: 48  LAEIAAVNSSKGIQVSVTSNGGGNAGQRPPRRSSGPGRTRKNEPNRNEAAEDLKNPKSNN 107

Query: 87  QEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKV 146
           QEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKV
Sbjct: 108 QEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKV 167

Query: 147 LRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAES 206
           LRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAES
Sbjct: 168 LRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAES 227

Query: 207 REMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 249
           REMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS
Sbjct: 228 REMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 269

[Close]

BLAST of Moc03g26510 vs. ExPASy TrEMBL
Match: A0A0A0LX66 (Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G470300 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 4.1e-67
Identity = 166/257 (64.59%), Postives = 196/257 (76.26%), Query Frame = 0


Query: 1   MEAVVFQSRTL-RFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVT-SNGGGNAGQRPPRR 60
           MEAVVF  R L RFPNL+S  RRP FA K++A V  SK IQ SV+ S   GNAG RPPRR
Sbjct: 1   MEAVVFLPRILIRFPNLISLRRRPTFASKDVADVYPSKNIQPSVSKSRPDGNAGNRPPRR 60

Query: 61  SSGPGRTRKNEPNRNEA-----AEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDS 120
           +S PG+ RK+E +  +       E +K  ++N+QEE+IALFRKIQTSIAK+SA++ DE+S
Sbjct: 61  NSLPGKARKSESSSRKTETPKDEESVKKSETNDQEEVIALFRKIQTSIAKESASSIDEES 120

Query: 121 HEDEIGAESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTS--PAAEFKLVR 180
            +DE    SILE+LRESRKQ+KG+TSKKAG KVLR KG SEE EM+  S  PAA+FKLVR
Sbjct: 121 RKDE--NASILETLRESRKQLKGKTSKKAGAKVLRSKGKSEEKEMHDPSPPPAADFKLVR 180

Query: 181 PPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGI 240
           PPSKFVKRSPIP           L+ + SQAIAESRE+KFPS ENMKLTELKA+AKSRGI
Sbjct: 181 PPSKFVKRSPIP-----------LKVDASQAIAESRELKFPSTENMKLTELKALAKSRGI 240

Query: 241 KGYSKLKKNELLELLRS 249
           KGYSKLKKNEL+E+LRS
Sbjct: 241 KGYSKLKKNELMEILRS 244

[Close]

BLAST of Moc03g26510 vs. ExPASy TrEMBL
Match: A0A6J1K6B8 (uncharacterized protein LOC111490473 OS=Cucurbita maxima OX=3661 GN=LOC111490473 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 5.0e-65
Identity = 168/255 (65.88%), Postives = 186/255 (72.94%), Query Frame = 0


Query: 1   MEAVVFQSRTL-RFPNLVSF-GRRPIFALKEIAAVNSSKGIQVSVTSNG-GGNAGQRPPR 60
           MEAVVFQSRTL RFPNLVSF  RRPIF LKEIA    S  IQ++V+SNG  GNAG +P R
Sbjct: 1   MEAVVFQSRTLIRFPNLVSFTRRRPIFTLKEIADGYRSNSIQLAVSSNGKDGNAGHQPVR 60

Query: 61  RSSGPGRTRKNEPNRNEA----AEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDS 120
           RSS PGRTRKN P+  +      ED+K PKSNNQEEIIALFRKIQTSIA+++A++ DEDS
Sbjct: 61  RSSAPGRTRKNVPSLRKTDTHKNEDMKKPKSNNQEEIIALFRKIQTSIAEEAASSIDEDS 120

Query: 121 HEDEIGAESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPP 180
           ++DE G ESILE+L ESRKQVKG+T K AGVK LRRK  SE         AAEFKLVRPP
Sbjct: 121 NKDEDGTESILEALTESRKQVKGKTLKNAGVKGLRRKDTSE--------AAAEFKLVRPP 180

Query: 181 SKFVKRSPIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKG 240
           S FVKRSPIP+P G NGS                     +VENMKL ELKAVAKSRGIKG
Sbjct: 181 SNFVKRSPIPTPAGGNGSHL-------------------TVENMKLKELKAVAKSRGIKG 228

Query: 241 YSKLKKNELLELLRS 249
           YSKLKKNELLELL S
Sbjct: 241 YSKLKKNELLELLTS 228

[Close]

BLAST of Moc03g26510 vs. ExPASy TrEMBL
Match: A0A5A7UMB7 (SAP-like protein BP-73 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002410 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.2e-60
Identity = 155/253 (61.26%), Postives = 191/253 (75.49%), Query Frame = 0


Query: 5   VFQSRT-LRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSN-GGGNAGQRPPRRSSGP 64
           +F+ +T +RF +L++        L +IA V  SK IQ+SV++N   GNA  RPPRR+S P
Sbjct: 41  LFEKKTHVRFESLLN--------LADIADVYPSKNIQLSVSNNRPDGNARNRPPRRNSLP 100

Query: 65  GRTRKNEPN--RNEA---AEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDE 124
           G+TRK+E +  + EA    E++K  K N+QEEIIALFRKIQ SIAK+SA++ DE+SH+DE
Sbjct: 101 GKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESHKDE 160

Query: 125 IGAESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTS--PAAEFKLVRPPSK 184
            GA SILE+LRE RKQ+KG+TSKKAG KV R KG SEE EM+  S  PAA+FKLVRPPSK
Sbjct: 161 HGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRPPSK 220

Query: 185 FVKRSPIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYS 244
           FVKRSPIP            + + SQAIAESRE+KFPS+ENMKL ELKA+AKSRGIKGYS
Sbjct: 221 FVKRSPIPP-----------KVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYS 274

Query: 245 KLKKNELLELLRS 249
           KLKKNEL+E+LRS
Sbjct: 281 KLKKNELMEILRS 274

[Close]

BLAST of Moc03g26510 vs. TAIR 10
Match: AT4G18740.1 (Rho termination factor )

HSP 1 Score: 101.7 bits (252), Expect = 8.9e-22
Identity = 72/174 (41.38%), Postives = 101/174 (58.05%), Query Frame = 0


Query: 81  NPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAE-----SILESLRESRKQVK 140
           NP  +NQEEII+L ++IQ+SI+K  +   +E+ + DE   E     +IL+ L +SRK+ +
Sbjct: 89  NPSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAILDVLEKSRKKTE 148

Query: 141 GRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPI-PSPPGRNGSRSQ 200
           G TS            + E+P      P  + +L RPPS FVKR+P+  S  G  G    
Sbjct: 149 GDTS------------VKEKP------PKRQVELPRPPSSFVKRTPLSSSASGPRGKLPV 208

Query: 201 LREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 249
              + +      +E K   +E MKL ELK VAK+RGIKGYSKL+K+ELLEL+RS
Sbjct: 209 SNSDKALGKLTKKEEKASLIETMKLAELKEVAKNRGIKGYSKLRKSELLELIRS 244

[Close]

BLAST of Moc03g26510 vs. TAIR 10
Match: AT4G18740.2 (Rho termination factor )

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-16
Identity = 66/173 (38.15%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 81  NPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAE-----SILESLRESRKQVK 140
           NP  +NQEEII+L ++IQ+SI+K  +   +E+ + DE   E     +IL+ L +SRK+ +
Sbjct: 89  NPSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAILDVLEKSRKKTE 148

Query: 141 GRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQL 200
           G TS            + E+P      P  + +L RPPS FVKR+P+ S    +G R   
Sbjct: 149 GDTS------------VKEKP------PKRQVELPRPPSSFVKRTPLSS--SASGPR--- 208

Query: 201 REEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 249
                                    ELK VAK+RGIKGYSKL+K+ELLEL+RS
Sbjct: 209 -------------------------ELKEVAKNRGIKGYSKLRKSELLELIRS 213

[Close]

BLAST of Moc03g26510 vs. TAIR 10
Match: AT4G18740.3 (Rho termination factor )

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-16
Identity = 66/173 (38.15%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 81  NPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSHEDEIGAE-----SILESLRESRKQVK 140
           NP  +NQEEII+L ++IQ+SI+K  +   +E+ + DE   E     +IL+ L +SRK+ +
Sbjct: 64  NPSKSNQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAILDVLEKSRKKTE 123

Query: 141 GRTSKKAGVKVLRRKGISEEPEMYHTSPAAEFKLVRPPSKFVKRSPIPSPPGRNGSRSQL 200
           G TS            + E+P      P  + +L RPPS FVKR+P+ S    +G R   
Sbjct: 124 GDTS------------VKEKP------PKRQVELPRPPSSFVKRTPLSS--SASGPR--- 183

Query: 201 REEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 249
                                    ELK VAK+RGIKGYSKL+K+ELLEL+RS
Sbjct: 184 -------------------------ELKEVAKNRGIKGYSKLRKSELLELIRS 188

[Close]

BLAST of Moc03g26510 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor )

HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 0


Query: 205 ESREMKFPSVENMKLTELKAVAKSRGIKGYSKLKKNELLELLRS 249
           E+ E     +  +KL EL+ +AKSRG+KG SK+KK EL+ELL S
Sbjct: 355 EAEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

The following BLAST results are available for this feature:

BLAST of Moc03g26510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139843.1	4.0e-125	100.00	uncharacterized protein LOC111010657 isoform X2 [Momordica charantia]	[more]
XP_022139842.1	3.1e-109	99.55	uncharacterized protein LOC111010657 isoform X1 [Momordica charantia]	[more]
XP_038893912.1	5.0e-75	69.23	SAP-like protein BP-73 isoform X3 [Benincasa hispida]	[more]
XP_038893911.1	4.6e-73	64.98	SAP-like protein BP-73 isoform X2 [Benincasa hispida]	[more]
XP_038893910.1	2.5e-71	64.06	SAP-like protein BP-73 isoform X1 [Benincasa hispida]	[more]

BLAST of Moc03g26510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4E7	3.3e-05	65.71	SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV...	[more]

BLAST of Moc03g26510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGN3	1.9e-125	100.00	uncharacterized protein LOC111010657 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CF22	1.5e-109	99.55	uncharacterized protein LOC111010657 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LX66	4.1e-67	64.59	Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G470300 PE=4 ...	[more]
A0A6J1K6B8	5.0e-65	65.88	uncharacterized protein LOC111490473 OS=Cucurbita maxima OX=3661 GN=LOC111490473...	[more]
A0A5A7UMB7	2.2e-60	61.26	SAP-like protein BP-73 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9...	[more]

BLAST of Moc03g26510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18740.1	8.9e-22	41.38	Rho termination factor	[more]
AT4G18740.2	1.5e-16	38.15	Rho termination factor	[more]
AT4G18740.3	1.5e-16	38.15	Rho termination factor	[more]
AT1G06190.1	1.7e-04	52.27	Rho termination factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.720.10		coord: 203..243 e-value: 7.9E-7 score: 30.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..84
None	No IPR available	PANTHER	PTHR34449	RHO TERMINATION FACTOR	coord: 4..248
None	No IPR available	PANTHER	PTHR34449:SF2	RHO TERMINATION FACTOR	coord: 4..248
IPR011112	Rho termination factor, N-terminal	PFAM	PF07498	Rho_N	coord: 215..243 e-value: 5.2E-8 score: 32.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g26510.1	Moc03g26510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination