Moc03g26350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g26350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	dynamin-related protein 4C-like
Location	chr3: 18990179 .. 18991045 (+)
RNA-Seq Expression	Moc03g26350
Synteny	Moc03g26350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTGTACTGCTCGAATAGTTGAATTTCTGGATAATTACTCGGGTGATGTACATAGGTTTCCTGCAAATGATTCGAGAAGGGATTTTCTGATGGAGGAGATCAGAATCTTGGAGGAAGCAAAATCAATTGGATTACCCAATTTCCTTCCCCGAACCGCATTTCTAGTAATTCTACAAAGAAAAGTAAAAGCGATTTCTTCTCTCCCCATCGGATTTGTAGAAACCGTCTGGAATTACTTGGAAAACGTTCTTACTTCTGTTCTAACGAAACATTCAGAAAATTACTACCAGCTCCAGCTCTCCACCAAAAGAGCCGGCCATGTCCTCATATCCAAGATGAAGGAGAGATCGATGGAACGAGTTATGGAGTTCGTCCAAATGGAGATGCTCACGGATTATACTTGCAACCCACAGTACATTGAGAAATGGAACAAACTGATTGTGCAGCAAGAATCGTTCATGAAACAGCTAGGGAACGATCAAGAGATGCCCTCGATAATCTCGATAGAAGGATTTGGGGAAGTTCAAGTGGGGGCGCTTAGCCAATACCTGCATCTCGCTCCACAGGCGTTCGATCTGAGAATGAGAATGACAGCGTACTGGAAGATTGTGATAAAACGATTGGTGGATTGTATGGCGCTTCATCTTCAATACAGCATCGATAATCTGATCAACAAAGAACTAGAATCGGAGATCGTGAGGGAACTGTTAGGGCCCGGCGGAGTTGGAATCGAGAAAATGTTGGAGGAATCTCCTGCTCTTGCTGTGAAGAGGGAGAAGCTCAGCCGGAGCATTGGGCGGCTCCGGGAATCGAGGGAGGTGGTGGCCAATATTCTTGATCGGATTGCTACTTTTGGCGGATAG

mRNA sequence

ATGCACTGTACTGCTCGAATAGTTGAATTTCTGGATAATTACTCGGGTGATGTACATAGGTTTCCTGCAAATGATTCGAGAAGGGATTTTCTGATGGAGGAGATCAGAATCTTGGAGGAAGCAAAATCAATTGGATTACCCAATTTCCTTCCCCGAACCGCATTTCTAGTAATTCTACAAAGAAAAGTAAAAGCGATTTCTTCTCTCCCCATCGGATTTGTAGAAACCGTCTGGAATTACTTGGAAAACGTTCTTACTTCTGTTCTAACGAAACATTCAGAAAATTACTACCAGCTCCAGCTCTCCACCAAAAGAGCCGGCCATGTCCTCATATCCAAGATGAAGGAGAGATCGATGGAACGAGTTATGGAGTTCGTCCAAATGGAGATGCTCACGGATTATACTTGCAACCCACAGTACATTGAGAAATGGAACAAACTGATTGTGCAGCAAGAATCGTTCATGAAACAGCTAGGGAACGATCAAGAGATGCCCTCGATAATCTCGATAGAAGGATTTGGGGAAGTTCAAGTGGGGGCGCTTAGCCAATACCTGCATCTCGCTCCACAGGCGTTCGATCTGAGAATGAGAATGACAGCGTACTGGAAGATTGTGATAAAACGATTGGTGGATTGTATGGCGCTTCATCTTCAATACAGCATCGATAATCTGATCAACAAAGAACTAGAATCGGAGATCGTGAGGGAACTGTTAGGGCCCGGCGGAGTTGGAATCGAGAAAATGTTGGAGGAATCTCCTGCTCTTGCTGTGAAGAGGGAGAAGCTCAGCCGGAGCATTGGGCGGCTCCGGGAATCGAGGGAGGTGGTGGCCAATATTCTTGATCGGATTGCTACTTTTGGCGGATAG

Coding sequence (CDS)

ATGCACTGTACTGCTCGAATAGTTGAATTTCTGGATAATTACTCGGGTGATGTACATAGGTTTCCTGCAAATGATTCGAGAAGGGATTTTCTGATGGAGGAGATCAGAATCTTGGAGGAAGCAAAATCAATTGGATTACCCAATTTCCTTCCCCGAACCGCATTTCTAGTAATTCTACAAAGAAAAGTAAAAGCGATTTCTTCTCTCCCCATCGGATTTGTAGAAACCGTCTGGAATTACTTGGAAAACGTTCTTACTTCTGTTCTAACGAAACATTCAGAAAATTACTACCAGCTCCAGCTCTCCACCAAAAGAGCCGGCCATGTCCTCATATCCAAGATGAAGGAGAGATCGATGGAACGAGTTATGGAGTTCGTCCAAATGGAGATGCTCACGGATTATACTTGCAACCCACAGTACATTGAGAAATGGAACAAACTGATTGTGCAGCAAGAATCGTTCATGAAACAGCTAGGGAACGATCAAGAGATGCCCTCGATAATCTCGATAGAAGGATTTGGGGAAGTTCAAGTGGGGGCGCTTAGCCAATACCTGCATCTCGCTCCACAGGCGTTCGATCTGAGAATGAGAATGACAGCGTACTGGAAGATTGTGATAAAACGATTGGTGGATTGTATGGCGCTTCATCTTCAATACAGCATCGATAATCTGATCAACAAAGAACTAGAATCGGAGATCGTGAGGGAACTGTTAGGGCCCGGCGGAGTTGGAATCGAGAAAATGTTGGAGGAATCTCCTGCTCTTGCTGTGAAGAGGGAGAAGCTCAGCCGGAGCATTGGGCGGCTCCGGGAATCGAGGGAGGTGGTGGCCAATATTCTTGATCGGATTGCTACTTTTGGCGGATAG

Protein sequence

MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQRKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSMERVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGALSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGPGGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG

Homology

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BLAST of Moc03g26350 vs. NCBI nr
Match: XP_022139859.1 (LOW QUALITY PROTEIN: dynamin-related protein 4C-like [Momordica charantia])

HSP 1 Score: 564.3 bits (1453), Expect = 6.0e-157
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ
Sbjct: 391 MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 450

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME
Sbjct: 451 RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 510

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA
Sbjct: 511 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 570

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP
Sbjct: 571 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 630

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 289
           GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG
Sbjct: 631 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 678

[Close]

BLAST of Moc03g26350 vs. NCBI nr
Match: XP_004147422.2 (dynamin-related protein 4C [Cucumis sativus] >KGN65594.1 hypothetical protein Csa_020097 [Cucumis sativus])

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 210/288 (72.92%), Postives = 259/288 (89.93%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+VE L+NYS ++++F   DS  +FL+EEI+ILEE+K+IGLPNFLPRTAFLVILQ
Sbjct: 400 MHCTARLVEMLNNYSKELNQFSTKDSGENFLIEEIKILEESKAIGLPNFLPRTAFLVILQ 459

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           RKVKA+SSLPIGFVET+WNYLEN++T+VL +H+ NY+QLQL+TKRAGHVL++KM++RSME
Sbjct: 460 RKVKAVSSLPIGFVETIWNYLENIVTAVLMEHASNYHQLQLATKRAGHVLLAKMRKRSME 519

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           R+MEFV+ME LTDYTCNP+Y  +WNKLI QQESF+KQ+  ++ +   I+I G+GEV+VG 
Sbjct: 520 RMMEFVEMEKLTDYTCNPEYGTEWNKLISQQESFVKQV--NENLAQKITIVGYGEVEVGG 579

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           L QY +L PQA+DLRMRMTAYWKIV+KRLVDCMALHL+YSID LIN+ELE EIV E+LGP
Sbjct: 580 LRQYEYLLPQAYDLRMRMTAYWKIVLKRLVDCMALHLEYSIDKLINEELEPEIVNEILGP 639

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 289
           GGVGIEKMLEESP+L +KR+KL+RS+GRLRE++EVV NILDRIATFGG
Sbjct: 640 GGVGIEKMLEESPSLVLKRDKLNRSVGRLREAKEVVGNILDRIATFGG 685

[Close]

BLAST of Moc03g26350 vs. NCBI nr
Match: XP_008443645.1 (PREDICTED: dynamin-related protein 4C-like [Cucumis melo] >KAA0057070.1 dynamin-related protein 4C-like [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 3.3e-115
Identity = 216/288 (75.00%), Postives = 256/288 (88.89%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+VE L+ YS  +++F  NDS R+FLMEE+ ILEE+K+IGLPNFLPRTAFLV+LQ
Sbjct: 400 MHCTARLVEMLNRYSEKLNQFSENDSGRNFLMEELSILEESKTIGLPNFLPRTAFLVLLQ 459

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           RKVKA+SSLPIGFVET+WNYLENVLT+VLTKHS NY+QLQLSTKRAGHVLI+KMK+RS+E
Sbjct: 460 RKVKAVSSLPIGFVETIWNYLENVLTAVLTKHSSNYHQLQLSTKRAGHVLIAKMKKRSLE 519

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           RVMEFV+ME LTDYTCNP+Y  + NKLI QQESF+KQ+      P I+ IEG+GEV+VG 
Sbjct: 520 RVMEFVEMEKLTDYTCNPEYGTERNKLISQQESFVKQVFG-SSAPKIM-IEGYGEVEVGE 579

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           L QY +L PQA+DLRM MTAYWKIV+KRLVDCMALHL+YSI+ LI++ELESEIV ELLGP
Sbjct: 580 LRQYEYLLPQAYDLRMTMTAYWKIVLKRLVDCMALHLEYSIEKLIDEELESEIVNELLGP 639

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 289
           GGVG+EKMLEE+P L++KR+KL+RSIGRLRES++VVAN LDRIATF G
Sbjct: 640 GGVGMEKMLEEAPNLSLKRDKLNRSIGRLRESKKVVANALDRIATFVG 685

[Close]

BLAST of Moc03g26350 vs. NCBI nr
Match: XP_024196508.1 (dynamin-related protein 4C [Rosa chinensis] >PRQ41172.1 putative dynamin GTPase [Rosa chinensis])

HSP 1 Score: 376.3 bits (965), Expect = 2.3e-100
Identity = 181/287 (63.07%), Postives = 237/287 (82.58%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+VE ++ YS D+++   +D +  FLM+EI+ILEEAK I LPNFLPR AFL+ILQ
Sbjct: 400 MHCTARLVEMVNQYSDDLYKCAESDPKVKFLMDEIKILEEAKGIALPNFLPRNAFLLILQ 459

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
            KV+ ISS+PIGFV+ VW+Y+E+V+ SVL KHSENYYQLQLS +RAGH L++KMK+RS+ 
Sbjct: 460 SKVREISSIPIGFVDQVWSYIEDVVISVLMKHSENYYQLQLSARRAGHNLMAKMKDRSIR 519

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
            +ME V+ME LTDYTC+P+Y+ +WNKL+ QQE+FM  + +D++ PS I+I+G GEV V  
Sbjct: 520 WMMEIVEMEKLTDYTCDPEYVAEWNKLMAQQEAFMNGVLHDEKRPSTIAIQGIGEVGVEV 579

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           L  Y H+  QAFDL+MRMTAYWK+V++R VDCMALHLQ S+ NL+NKE+E EIV EL+GP
Sbjct: 580 LRHYPHVLAQAFDLKMRMTAYWKVVLRRFVDCMALHLQLSVSNLVNKEMEVEIVNELMGP 639

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFG 288
            G GIE+MLEESPA+AVKREKL++SI +LR+S+EVVA I+D I ++G
Sbjct: 640 YGGGIERMLEESPAVAVKREKLNKSIKKLRDSKEVVAKIMDGIISYG 686

[Close]

BLAST of Moc03g26350 vs. NCBI nr
Match: KAF3957870.1 (hypothetical protein CMV_017159 [Castanea mollissima])

HSP 1 Score: 376.3 bits (965), Expect = 2.3e-100
Identity = 184/286 (64.34%), Postives = 231/286 (80.77%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+VE L+ YS ++H+        +FLMEEI +LEEAK IGLPNFLPRTAFL ILQ
Sbjct: 369 MHCTARLVEMLNQYSDELHKHAETKPAENFLMEEIMVLEEAKGIGLPNFLPRTAFLTILQ 428

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           +KVK ISS+PI F E VWNY+E V+ SV+ +HSENYYQLQLS +RAGH LI+KMKERS+ 
Sbjct: 429 KKVKGISSIPISFAEKVWNYVEEVVISVIMQHSENYYQLQLSFRRAGHNLIAKMKERSVN 488

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
            VME V+ME LTDYTCNP+Y+  WNKL+VQQ++FM  +  + + PS+I +EGFGE+ V  
Sbjct: 489 WVMEIVEMEKLTDYTCNPEYLSDWNKLMVQQDAFMTYVLTNVDWPSVIKLEGFGEIDVTH 548

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           L +Y H+  QAFDL+MR TAYWKIV+KRLVDCMALHL  SI NL+NKE E+EIV EL+GP
Sbjct: 549 LKKYSHVLQQAFDLKMRSTAYWKIVLKRLVDCMALHLLLSIGNLVNKEFEAEIVNELMGP 608

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATF 287
           GG GIE+MLEESPA+A KR+K+++SI  L++S+EVVA I+D+I T+
Sbjct: 609 GG-GIERMLEESPAVASKRQKINKSIELLKKSKEVVAKIMDKIGTY 653

[Close]

BLAST of Moc03g26350 vs. ExPASy Swiss-Prot
Match: Q9ZP55 (Dynamin-related protein 4C OS=Arabidopsis thaliana OX=3702 GN=DRP4C PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.9e-74
Identity = 140/284 (49.30%), Postives = 201/284 (70.77%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+ + L  +S  +   P   +  +FLM+EI+IL+E K +GLPNF+PR+AFL IL 
Sbjct: 386 MHCTARLADMLSQFSDSLQAKPKEVA--EFLMDEIKILDECKCVGLPNFIPRSAFLAILS 445

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           + V  I   P+ F+  +W+Y+E+VL+SV  K S+N+ Q+Q S KRAG  LISK+KE+S+ 
Sbjct: 446 QHVDGIQDKPVEFINKIWDYIEDVLSSVTAKRSDNFPQIQSSIKRAGRNLISKIKEQSVN 505

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           RVME V+ME LTDYTCNP+Y+  W +    QESF+  +  ++ +P   S+ GFG V++  
Sbjct: 506 RVMEIVEMEKLTDYTCNPEYMTSWTQKTSAQESFIDAVVKNENIPDYFSVTGFGNVKISH 565

Query: 181 LSQY-LHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLG 240
           L +Y  HL   AFD++MR+T+YWKIV++R+VD +AL+LQ S+ +L+N   + EIV E++ 
Sbjct: 566 LRKYHAHLLIPAFDMKMRITSYWKIVLRRIVDNLALYLQLSVKSLVNTRFQKEIVAEMVD 625

Query: 241 P-GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDR 283
           P  G G+EKMLEESP +A KREKL  SI  L+ES++ VA I+D+
Sbjct: 626 PRDGGGVEKMLEESPLVASKREKLQNSIKLLKESKDAVAAIVDQ 667

[Close]

BLAST of Moc03g26350 vs. ExPASy TrEMBL
Match: A0A6J1CE52 (LOW QUALITY PROTEIN: dynamin-related protein 4C-like OS=Momordica charantia OX=3673 GN=LOC111010670 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 2.9e-157
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ
Sbjct: 391 MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 450

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME
Sbjct: 451 RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 510

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA
Sbjct: 511 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 570

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP
Sbjct: 571 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 630

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 289
           GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG
Sbjct: 631 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 678

[Close]

BLAST of Moc03g26350 vs. ExPASy TrEMBL
Match: A0A0A0LX52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G467140 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 7.7e-118
Identity = 210/288 (72.92%), Postives = 259/288 (89.93%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+VE L+NYS ++++F   DS  +FL+EEI+ILEE+K+IGLPNFLPRTAFLVILQ
Sbjct: 400 MHCTARLVEMLNNYSKELNQFSTKDSGENFLIEEIKILEESKAIGLPNFLPRTAFLVILQ 459

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           RKVKA+SSLPIGFVET+WNYLEN++T+VL +H+ NY+QLQL+TKRAGHVL++KM++RSME
Sbjct: 460 RKVKAVSSLPIGFVETIWNYLENIVTAVLMEHASNYHQLQLATKRAGHVLLAKMRKRSME 519

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           R+MEFV+ME LTDYTCNP+Y  +WNKLI QQESF+KQ+  ++ +   I+I G+GEV+VG 
Sbjct: 520 RMMEFVEMEKLTDYTCNPEYGTEWNKLISQQESFVKQV--NENLAQKITIVGYGEVEVGG 579

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           L QY +L PQA+DLRMRMTAYWKIV+KRLVDCMALHL+YSID LIN+ELE EIV E+LGP
Sbjct: 580 LRQYEYLLPQAYDLRMRMTAYWKIVLKRLVDCMALHLEYSIDKLINEELEPEIVNEILGP 639

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 289
           GGVGIEKMLEESP+L +KR+KL+RS+GRLRE++EVV NILDRIATFGG
Sbjct: 640 GGVGIEKMLEESPSLVLKRDKLNRSVGRLREAKEVVGNILDRIATFGG 685

[Close]

BLAST of Moc03g26350 vs. ExPASy TrEMBL
Match: A0A5A7UPN5 (Dynamin-related protein 4C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002610 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.6e-115
Identity = 216/288 (75.00%), Postives = 256/288 (88.89%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+VE L+ YS  +++F  NDS R+FLMEE+ ILEE+K+IGLPNFLPRTAFLV+LQ
Sbjct: 400 MHCTARLVEMLNRYSEKLNQFSENDSGRNFLMEELSILEESKTIGLPNFLPRTAFLVLLQ 459

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           RKVKA+SSLPIGFVET+WNYLENVLT+VLTKHS NY+QLQLSTKRAGHVLI+KMK+RS+E
Sbjct: 460 RKVKAVSSLPIGFVETIWNYLENVLTAVLTKHSSNYHQLQLSTKRAGHVLIAKMKKRSLE 519

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           RVMEFV+ME LTDYTCNP+Y  + NKLI QQESF+KQ+      P I+ IEG+GEV+VG 
Sbjct: 520 RVMEFVEMEKLTDYTCNPEYGTERNKLISQQESFVKQVFG-SSAPKIM-IEGYGEVEVGE 579

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           L QY +L PQA+DLRM MTAYWKIV+KRLVDCMALHL+YSI+ LI++ELESEIV ELLGP
Sbjct: 580 LRQYEYLLPQAYDLRMTMTAYWKIVLKRLVDCMALHLEYSIEKLIDEELESEIVNELLGP 639

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 289
           GGVG+EKMLEE+P L++KR+KL+RSIGRLRES++VVAN LDRIATF G
Sbjct: 640 GGVGMEKMLEEAPNLSLKRDKLNRSIGRLRESKKVVANALDRIATFVG 685

[Close]

BLAST of Moc03g26350 vs. ExPASy TrEMBL
Match: A0A1S3B818 (dynamin-related protein 4C-like OS=Cucumis melo OX=3656 GN=LOC103487189 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.6e-115
Identity = 216/288 (75.00%), Postives = 256/288 (88.89%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+VE L+ YS  +++F  NDS R+FLMEE+ ILEE+K+IGLPNFLPRTAFLV+LQ
Sbjct: 400 MHCTARLVEMLNRYSEKLNQFSENDSGRNFLMEELSILEESKTIGLPNFLPRTAFLVLLQ 459

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           RKVKA+SSLPIGFVET+WNYLENVLT+VLTKHS NY+QLQLSTKRAGHVLI+KMK+RS+E
Sbjct: 460 RKVKAVSSLPIGFVETIWNYLENVLTAVLTKHSSNYHQLQLSTKRAGHVLIAKMKKRSLE 519

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           RVMEFV+ME LTDYTCNP+Y  + NKLI QQESF+KQ+      P I+ IEG+GEV+VG 
Sbjct: 520 RVMEFVEMEKLTDYTCNPEYGTERNKLISQQESFVKQVFG-SSAPKIM-IEGYGEVEVGE 579

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           L QY +L PQA+DLRM MTAYWKIV+KRLVDCMALHL+YSI+ LI++ELESEIV ELLGP
Sbjct: 580 LRQYEYLLPQAYDLRMTMTAYWKIVLKRLVDCMALHLEYSIEKLIDEELESEIVNELLGP 639

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFGG 289
           GGVG+EKMLEE+P L++KR+KL+RSIGRLRES++VVAN LDRIATF G
Sbjct: 640 GGVGMEKMLEEAPNLSLKRDKLNRSIGRLRESKKVVANALDRIATFVG 685

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BLAST of Moc03g26350 vs. ExPASy TrEMBL
Match: A0A2P6R3Z8 (Putative dynamin GTPase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0444021 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.1e-100
Identity = 181/287 (63.07%), Postives = 237/287 (82.58%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+VE ++ YS D+++   +D +  FLM+EI+ILEEAK I LPNFLPR AFL+ILQ
Sbjct: 400 MHCTARLVEMVNQYSDDLYKCAESDPKVKFLMDEIKILEEAKGIALPNFLPRNAFLLILQ 459

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
            KV+ ISS+PIGFV+ VW+Y+E+V+ SVL KHSENYYQLQLS +RAGH L++KMK+RS+ 
Sbjct: 460 SKVREISSIPIGFVDQVWSYIEDVVISVLMKHSENYYQLQLSARRAGHNLMAKMKDRSIR 519

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
            +ME V+ME LTDYTC+P+Y+ +WNKL+ QQE+FM  + +D++ PS I+I+G GEV V  
Sbjct: 520 WMMEIVEMEKLTDYTCDPEYVAEWNKLMAQQEAFMNGVLHDEKRPSTIAIQGIGEVGVEV 579

Query: 181 LSQYLHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLGP 240
           L  Y H+  QAFDL+MRMTAYWK+V++R VDCMALHLQ S+ NL+NKE+E EIV EL+GP
Sbjct: 580 LRHYPHVLAQAFDLKMRMTAYWKVVLRRFVDCMALHLQLSVSNLVNKEMEVEIVNELMGP 639

Query: 241 GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDRIATFG 288
            G GIE+MLEESPA+AVKREKL++SI +LR+S+EVVA I+D I ++G
Sbjct: 640 YGGGIERMLEESPAVAVKREKLNKSIKKLRDSKEVVAKIMDGIISYG 686

[Close]

BLAST of Moc03g26350 vs. TAIR 10
Match: AT1G60500.1 (Dynamin related protein 4C )

HSP 1 Score: 279.6 bits (714), Expect = 2.8e-75
Identity = 140/284 (49.30%), Postives = 201/284 (70.77%), Query Frame = 0


Query: 1   MHCTARIVEFLDNYSGDVHRFPANDSRRDFLMEEIRILEEAKSIGLPNFLPRTAFLVILQ 60
           MHCTAR+ + L  +S  +   P   +  +FLM+EI+IL+E K +GLPNF+PR+AFL IL 
Sbjct: 386 MHCTARLADMLSQFSDSLQAKPKEVA--EFLMDEIKILDECKCVGLPNFIPRSAFLAILS 445

Query: 61  RKVKAISSLPIGFVETVWNYLENVLTSVLTKHSENYYQLQLSTKRAGHVLISKMKERSME 120
           + V  I   P+ F+  +W+Y+E+VL+SV  K S+N+ Q+Q S KRAG  LISK+KE+S+ 
Sbjct: 446 QHVDGIQDKPVEFINKIWDYIEDVLSSVTAKRSDNFPQIQSSIKRAGRNLISKIKEQSVN 505

Query: 121 RVMEFVQMEMLTDYTCNPQYIEKWNKLIVQQESFMKQLGNDQEMPSIISIEGFGEVQVGA 180
           RVME V+ME LTDYTCNP+Y+  W +    QESF+  +  ++ +P   S+ GFG V++  
Sbjct: 506 RVMEIVEMEKLTDYTCNPEYMTSWTQKTSAQESFIDAVVKNENIPDYFSVTGFGNVKISH 565

Query: 181 LSQY-LHLAPQAFDLRMRMTAYWKIVIKRLVDCMALHLQYSIDNLINKELESEIVRELLG 240
           L +Y  HL   AFD++MR+T+YWKIV++R+VD +AL+LQ S+ +L+N   + EIV E++ 
Sbjct: 566 LRKYHAHLLIPAFDMKMRITSYWKIVLRRIVDNLALYLQLSVKSLVNTRFQKEIVAEMVD 625

Query: 241 P-GGVGIEKMLEESPALAVKREKLSRSIGRLRESREVVANILDR 283
           P  G G+EKMLEESP +A KREKL  SI  L+ES++ VA I+D+
Sbjct: 626 PRDGGGVEKMLEESPLVASKREKLQNSIKLLKESKDAVAAIVDQ 667

The following BLAST results are available for this feature:

BLAST of Moc03g26350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139859.1	6.0e-157	100.00	LOW QUALITY PROTEIN: dynamin-related protein 4C-like [Momordica charantia]	[more]
XP_004147422.2	1.6e-117	72.92	dynamin-related protein 4C [Cucumis sativus] >KGN65594.1 hypothetical protein Cs...	[more]
XP_008443645.1	3.3e-115	75.00	PREDICTED: dynamin-related protein 4C-like [Cucumis melo] >KAA0057070.1 dynamin-...	[more]
XP_024196508.1	2.3e-100	63.07	dynamin-related protein 4C [Rosa chinensis] >PRQ41172.1 putative dynamin GTPase ...	[more]
KAF3957870.1	2.3e-100	64.34	hypothetical protein CMV_017159 [Castanea mollissima]	[more]

BLAST of Moc03g26350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZP55	3.9e-74	49.30	Dynamin-related protein 4C OS=Arabidopsis thaliana OX=3702 GN=DRP4C PE=2 SV=1	[more]

BLAST of Moc03g26350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CE52	2.9e-157	100.00	LOW QUALITY PROTEIN: dynamin-related protein 4C-like OS=Momordica charantia OX=3...	[more]
A0A0A0LX52	7.7e-118	72.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G467140 PE=4 SV=1	[more]
A0A5A7UPN5	1.6e-115	75.00	Dynamin-related protein 4C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3B818	1.6e-115	75.00	dynamin-related protein 4C-like OS=Cucumis melo OX=3656 GN=LOC103487189 PE=4 SV=...	[more]
A0A2P6R3Z8	1.1e-100	63.07	Putative dynamin GTPase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0444021 PE=4...	[more]

BLAST of Moc03g26350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60500.1	2.8e-75	49.30	Dynamin related protein 4C	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003130	Dynamin GTPase effector	SMART	SM00302	GED_2	coord: 183..279 e-value: 8.7E-6 score: 35.2
IPR003130	Dynamin GTPase effector	PFAM	PF02212	GED	coord: 191..278 e-value: 1.3E-11 score: 44.5
None	No IPR available	GENE3D	1.20.120.1240	Dynamin, middle domain	coord: 1..259 e-value: 4.1E-35 score: 123.3
None	No IPR available	PANTHER	PTHR11566:SF186	DYNAMIN RELATED PROTEIN 4C-RELATED	coord: 1..284
IPR000375	Dynamin stalk domain	PFAM	PF01031	Dynamin_M	coord: 1..146 e-value: 5.5E-24 score: 84.9
IPR022812	Dynamin	PANTHER	PTHR11566	DYNAMIN	coord: 1..284
IPR020850	GTPase effector domain	PROSITE	PS51388	GED	coord: 191..284 score: 20.334528

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g26350.1	Moc03g26350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0008017	microtubule binding