Moc03g25960 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g25960
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr3: 18691764 .. 18693573 (+)
RNA-Seq Expression	Moc03g25960
Synteny	Moc03g25960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCTTGCAATATTCAAATATTCATACAACTCTTTCTTTGTGCTCCTAACGCTAAAAGCATACTTCTTCCAATGGCGGCCTCCACAATGGCTCTCTCCTCTCCGTCACTCGCCGGAAAGGCGGTGAAGCTCACGCCCTCTTCCCCCGAGCTTCTCGGCAATGGGAGAGTCAGCATGAGAAAATTTGTCTCCAAGTCCGTTTCTTCTGGGAGCCCATGGTACGGACCCGACCGTGTCAAATATTTGGGCCCATTCTCCGGTGAGCCTCCATCCTACCTCACCGGAGAATTCCCTGGAGACTATGGTTGGGATACCGCCGGACTTTCTGCAGATCCCGAGACCTTTGCCAAGAATCGTGAGCTCGAAGTCATACACTCCAGGTTAGATTGAAAACATACCATTTTCAAATGTAGATTTAGAAAGTTTGAAATTTTACAAAACTAATATAATCCCAATCCAAAAGGTATATTTTTTTTAAGTTTCTTTTACACTATATTTAAAGAAGATAGAAGGTTGAATTATACAAAATACTTTGGATAGGTTTCAACAATACCATCTTTCACTTTTACCCTTCAACTATAAATTTATTTCAAAATAATTACCCTTCATCAATTTTTATGTTAAAGTGAAAATTGAAATTAAAAGTGACGGTAGTACCTGTTGTAAAGGTGTTAAGTTCAATTTAGTCAAACTTTAGGATAGATTTTACCTATATAGTCATATCCAATTCTAACATTTCATTTTAACCCTTAACGATTGAAATTTATTTCAAAATGGCCTCATTAGAAAATGACAATTAGTTGAAGAATAAAGGTTATACCCACTTGGACATACAATGGTGGTGTAGTTGTAAAAAAGTCAAAAGGGTTCAAAATGGTCCCATTAGAGGAAACATATCTAGGAGATAGAGTTTTGATTGAAATGATGTTGAGGAGGCTACGCATTGTGGGAAACGTTGATAAAAATCACAACCTATCTTAGAAAAATCAACGTGGAGAGAAGTCAAGAGAGAACTTCATATAGTTCATGCATGAGAGGAAAATAGAATAGTGGGGTCGATTGAAAGCGTCAATATATGAGAGGTAAGATGACCCATATCAAGATTCATGAGATTTCATCTCAAAATCAATTGGCAATGAAAGGAGTAGCCCATGTCTATTATAAACCATTGTTAAGTCTCTCCTTTTATCAATGTGGGATCCTTAACCACCCAAAAACAAAAAATGGACATATTGATGAAGGAAGATAATTTTCATCCTCAAATATAAGAAATCTATTATTTTTCAAATCTCTTGAAAATATATTTGAATTCTCTAGGTGGGCTATGCTTGGGGCCTTGGGCTGCGTGTTCCCAGAGCTTCTATCCCGCAACGGTGTGAAATTCGGGGAAGCGGTATGGTTCAAGGCTGGATCTCAGATCTTCAATGAAGGTGGGCTCGACTACTTGGGCAACCCCAGCTTGATCCACGCACAGAGCATTTTAGCCATTTGGGCTTCCCAAGTAGTTCTAATGGGAGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTCGGCGAGGTGACCGACCCGATCTACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCATTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGGTTGGCGATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCTATTGTCACCGGAAAAGGTCCATTGGAGAACCTTGCTGACCATTTGGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCCACCGACTTTGTTCCTGGAAAATAA

mRNA sequence

ATGTCATCTTGCAATATTCAAATATTCATACAACTCTTTCTTTGTGCTCCTAACGCTAAAAGCATACTTCTTCCAATGGCGGCCTCCACAATGGCTCTCTCCTCTCCGTCACTCGCCGGAAAGGCGGTGAAGCTCACGCCCTCTTCCCCCGAGCTTCTCGGCAATGGGAGAGTCAGCATGAGAAAATTTGTCTCCAAGTCCGTTTCTTCTGGGAGCCCATGGTACGGACCCGACCGTGTCAAATATTTGGGCCCATTCTCCGGTGAGCCTCCATCCTACCTCACCGGAGAATTCCCTGGAGACTATGGTTGGGATACCGCCGGACTTTCTGCAGATCCCGAGACCTTTGCCAAGAATCGTGAGCTCGAAGTCATACACTCCAGGTGGGCTATGCTTGGGGCCTTGGGCTGCGTGTTCCCAGAGCTTCTATCCCGCAACGGTGTGAAATTCGGGGAAGCGGTATGGTTCAAGGCTGGATCTCAGATCTTCAATGAAGGTGGGCTCGACTACTTGGGCAACCCCAGCTTGATCCACGCACAGAGCATTTTAGCCATTTGGGCTTCCCAAGTAGTTCTAATGGGAGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTCGGCGAGGTGACCGACCCGATCTACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCATTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGGTTGGCGATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCTATTGTCACCGGAAAAGGTCCATTGGAGAACCTTGCTGACCATTTGGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCCACCGACTTTGTTCCTGGAAAATAA

Coding sequence (CDS)

ATGTCATCTTGCAATATTCAAATATTCATACAACTCTTTCTTTGTGCTCCTAACGCTAAAAGCATACTTCTTCCAATGGCGGCCTCCACAATGGCTCTCTCCTCTCCGTCACTCGCCGGAAAGGCGGTGAAGCTCACGCCCTCTTCCCCCGAGCTTCTCGGCAATGGGAGAGTCAGCATGAGAAAATTTGTCTCCAAGTCCGTTTCTTCTGGGAGCCCATGGTACGGACCCGACCGTGTCAAATATTTGGGCCCATTCTCCGGTGAGCCTCCATCCTACCTCACCGGAGAATTCCCTGGAGACTATGGTTGGGATACCGCCGGACTTTCTGCAGATCCCGAGACCTTTGCCAAGAATCGTGAGCTCGAAGTCATACACTCCAGGTGGGCTATGCTTGGGGCCTTGGGCTGCGTGTTCCCAGAGCTTCTATCCCGCAACGGTGTGAAATTCGGGGAAGCGGTATGGTTCAAGGCTGGATCTCAGATCTTCAATGAAGGTGGGCTCGACTACTTGGGCAACCCCAGCTTGATCCACGCACAGAGCATTTTAGCCATTTGGGCTTCCCAAGTAGTTCTAATGGGAGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTCGGCGAGGTGACCGACCCGATCTACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCATTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGGTTGGCGATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCTATTGTCACCGGAAAAGGTCCATTGGAGAACCTTGCTGACCATTTGGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCCACCGACTTTGTTCCTGGAAAATAA

Protein sequence

MSSCNIQIFIQLFLCAPNAKSILLPMAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATDFVPGK

Homology

[Close]

BLAST of Moc03g25960 vs. NCBI nr
Match: XP_022139935.1 (chlorophyll a-b binding protein 3, chloroplastic-like [Momordica charantia])

HSP 1 Score: 587.4 bits (1513), Expect = 6.7e-164
Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MSSCNIQIFIQLFLCAPNAKSILLPMAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSM 60
           MSSCNIQIFIQLFLCAPNAKSILLPMAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSM
Sbjct: 1   MSSCNIQIFIQLFLCAPNAKSILLPMAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSM 60

Query: 61  RKFVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 120
           RKFVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 61  RKFVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 120

Query: 121 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQ 180
           ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQ
Sbjct: 121 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQ 180

Query: 181 SILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK 240
           SILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK
Sbjct: 181 SILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK 240

Query: 241 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATDFVPG 290
           NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT+FVPG
Sbjct: 241 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 289

[Close]

BLAST of Moc03g25960 vs. NCBI nr
Match: XP_022142169.1 (chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia])

HSP 1 Score: 542.3 bits (1396), Expect = 2.5e-150
Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205
           NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 266 NLADHLADPVNNNAWAYATDFVPGK 291
           NLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Moc03g25960 vs. NCBI nr
Match: XP_038877609.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 530.8 bits (1366), Expect = 7.4e-147
Identity = 260/266 (97.74%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGN-GRVSMRKFVSKSVSSGSPWYGPDRVKYLG 85
           MAASTMALSSPSLAGKAVKLTPSSPELLGN GRVSMRK  SKS+SSGSPWYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGGRVSMRKSASKSISSGSPWYGPDRVKYLG 60

Query: 86  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 145
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120

Query: 146 RNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 205
           RNGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 180

Query: 206 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 265
           PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 266 ENLADHLADPVNNNAWAYATDFVPGK 291
           ENLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 266

[Close]

BLAST of Moc03g25960 vs. NCBI nr
Match: XP_022142175.1 (chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia])

HSP 1 Score: 530.4 bits (1365), Expect = 9.7e-147
Identity = 262/274 (95.62%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           M+ASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRK VSKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MSASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNP---------SLIHAQSILAIWASQVVLMGAV 205
           NGVKFGEAVWFKAGSQIFNEGGLDYLGNP         SLIHAQSILAIWASQVVLMGAV
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSIXSLIHAQSILAIWASQVVLMGAV 180

Query: 206 EGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA 265
           EGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA
Sbjct: 181 EGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA 240

Query: 266 IVTGKGPLENLADHLADPVNNNAWAYATDFVPGK 291
           IVTGKGPLENLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 274

[Close]

BLAST of Moc03g25960 vs. NCBI nr
Match: XP_008444193.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0053968.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20653.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 529.6 bits (1363), Expect = 1.7e-146
Identity = 257/265 (96.98%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           MAASTMALSSPSLAGKAVKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 266 NLADHLADPVNNNAWAYATDFVPGK 291
           NLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Moc03g25960 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.4e-143
Identity = 249/264 (94.32%), Postives = 257/264 (97.35%), Query Frame = 0


Query: 27  AASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGPF 86
           AAS+MALSSPSLAGKAVKL PS+PE+   GRVSMRK V+K VSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 87  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 146
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 147 GVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPL 206
           GVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 207 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 266
           GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 267 LADHLADPVNNNAWAYATDFVPGK 291
           LADHLA PVNNNAWAYAT+FVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Moc03g25960 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.5e-142
Identity = 240/265 (90.57%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           MAA+TMALSSPS AG+AVKL+PS+PE+ GNGRVSMRK V+K V+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 266 NLADHLADPVNNNAWAYATDFVPGK 291
           NLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Moc03g25960 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 7.5e-142
Identity = 243/267 (91.01%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVS--KSVSSGSPWYGPDRVKYL 85
           MAASTMALSSPS AGKAVKL+PSS E+ GNG+V+MRK  S  K+VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 86  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 145
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 146 SRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 205
           +RNGVKFGEAVWFKAGSQIF+EGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 206 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 265
           GPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 266 LENLADHLADPVNNNAWAYATDFVPGK 291
           LENLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Moc03g25960 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 3.7e-141
Identity = 238/255 (93.33%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 36  PSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 95
           P+LAG+AVKL+P++PE+ GN + +MRK  SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 96  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 155
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 156 FKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYP 215
           FKAGSQIF+EGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 216 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 275
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 276 NNNAWAYATDFVPGK 291
           NNNAWAYAT+FVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of Moc03g25960 vs. ExPASy Swiss-Prot
Match: P07370 (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB1B PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.1e-140
Identity = 238/265 (89.81%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           MAA+TMALSSPS AG+AVKL+PS+ E+ GNGR++MRK V+KS  S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 266 NLADHLADPVNNNAWAYATDFVPGK 291
           NLADHLADPVNNNAWA+AT+FVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Moc03g25960 vs. ExPASy TrEMBL
Match: A0A6J1CDN4 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010725 PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.2e-164
Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MSSCNIQIFIQLFLCAPNAKSILLPMAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSM 60
           MSSCNIQIFIQLFLCAPNAKSILLPMAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSM
Sbjct: 1   MSSCNIQIFIQLFLCAPNAKSILLPMAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSM 60

Query: 61  RKFVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 120
           RKFVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 61  RKFVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 120

Query: 121 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQ 180
           ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQ
Sbjct: 121 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQ 180

Query: 181 SILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK 240
           SILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK
Sbjct: 181 SILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK 240

Query: 241 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATDFVPG 290
           NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT+FVPG
Sbjct: 241 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 289

[Close]

BLAST of Moc03g25960 vs. ExPASy TrEMBL
Match: A0A6J1CKT5 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012353 PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205
           NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 266 NLADHLADPVNNNAWAYATDFVPGK 291
           NLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Moc03g25960 vs. ExPASy TrEMBL
Match: A0A6J1CK60 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012357 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.7e-147
Identity = 262/274 (95.62%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           M+ASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRK VSKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MSASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNP---------SLIHAQSILAIWASQVVLMGAV 205
           NGVKFGEAVWFKAGSQIFNEGGLDYLGNP         SLIHAQSILAIWASQVVLMGAV
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSIXSLIHAQSILAIWASQVVLMGAV 180

Query: 206 EGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA 265
           EGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA
Sbjct: 181 EGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA 240

Query: 266 IVTGKGPLENLADHLADPVNNNAWAYATDFVPGK 291
           IVTGKGPLENLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 274

[Close]

BLAST of Moc03g25960 vs. ExPASy TrEMBL
Match: A0A5D3DAQ5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00370 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 8.0e-147
Identity = 257/265 (96.98%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           MAASTMALSSPSLAGKAVKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 266 NLADHLADPVNNNAWAYATDFVPGK 291
           NLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Moc03g25960 vs. ExPASy TrEMBL
Match: A0A1S3BAK6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487605 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 8.0e-147
Identity = 257/265 (96.98%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           MAASTMALSSPSLAGKAVKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 266 NLADHLADPVNNNAWAYATDFVPGK 291
           NLADHLADPVNNNAWAYAT+FVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Moc03g25960 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 483.0 bits (1242), Expect = 1.7e-136
Identity = 231/266 (86.84%), Postives = 250/266 (93.98%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85
           MAASTMALSSP+L GKAVKL+P++ E+ G GR++MRK    +  SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-G 205
           NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 206 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 265
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 266 ENLADHLADPVNNNAWAYATDFVPGK 291
           ENLADHLADPVNNNAWA+AT+FVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Moc03g25960 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 481.9 bits (1239), Expect = 3.7e-136
Identity = 233/267 (87.27%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVS-SGSPWYGPDRVKYLG 85
           MAASTMALSSP+ AGKAVKL+P++ E+LG+GRV+MRK V+K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 86  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 145
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 146 RNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 205
           RNGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 206 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 265
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 266 LENLADHLADPVNNNAWAYATDFVPGK 291
           +ENLADHLADPVNNNAWA+AT+FVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Moc03g25960 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-135
Identity = 232/267 (86.89%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVS-SGSPWYGPDRVKYLG 85
           MAASTMALSSP+ AGKAV L+P++ E+LG+GRV+MRK V+K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 86  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 145
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 146 RNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 205
           RNGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 206 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 265
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 266 LENLADHLADPVNNNAWAYATDFVPGK 291
           +ENLADHLADPVNNNAWA+AT+FVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Moc03g25960 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-135
Identity = 232/267 (86.89%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVS-SGSPWYGPDRVKYLG 85
           MAASTMALSSP+ AGKAV L+P++ E+LG+GRV+MRK V+K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 86  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 145
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 146 RNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 205
           RNGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 206 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 265
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 266 LENLADHLADPVNNNAWAYATDFVPGK 291
           +ENLADHLADPVNNNAWA+AT+FVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Moc03g25960 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 476.5 bits (1225), Expect = 1.5e-134
Identity = 232/267 (86.89%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVS-SGSPWYGPDRVKYLG 85
           MA+STMALSSP+ AGKAVK  P++ ++LG+GRV+MRK V+K    SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 86  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 145
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 146 RNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 205
           RNGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 206 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 265
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 266 LENLADHLADPVNNNAWAYATDFVPGK 291
           LENLADHLADPVNNNAWA+AT+FVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Moc03g25960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139935.1	6.7e-164	99.65	chlorophyll a-b binding protein 3, chloroplastic-like [Momordica charantia]	[more]
XP_022142169.1	2.5e-150	99.62	chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]	[more]
XP_038877609.1	7.4e-147	97.74	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_022142175.1	9.7e-147	95.62	chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]	[more]
XP_008444193.1	1.7e-146	96.98	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]

BLAST of Moc03g25960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09756	1.4e-143	94.32	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P27493	1.5e-142	90.57	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27495	7.5e-142	91.01	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P08221	3.7e-141	93.33	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P07370	1.1e-140	89.81	Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of Moc03g25960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDN4	3.2e-164	99.65	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CKT5	1.2e-150	99.62	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CK60	4.7e-147	95.62	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3DAQ5	8.0e-147	96.98	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BAK6	8.0e-147	96.98	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Moc03g25960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	1.7e-136	86.84	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	3.7e-136	87.27	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	1.4e-135	86.89	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.4e-135	86.89	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	1.5e-134	86.89	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 81..283 e-value: 1.5E-90 score: 304.5
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 90..256 e-value: 2.7E-49 score: 167.8
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 26..290
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 26..290
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 73..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g25960.1	Moc03g25960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding