Moc03g25650 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g25650
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr3: 18455314 .. 18458324 (-)
RNA-Seq Expression	Moc03g25650
Synteny	Moc03g25650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGCAATCTTCTTATTATGATCAGATTTCCCACACCCTTTCTCAAAAAATGGTATGCTACGACGACATATTCATAATTATATTGTTCTACCTGCATGAATCTCACTTCTCTTTCATTTAGATACACAATATATTGCACATTTATAGCCTATAAGGCTTTGTTTTTGGTATTAAATGAATTGGTGCAGTTGGAAGAAAAGGAAATGAATAACAAGGTAAGCTTTCTAAGATTTCAAGAACGATTGATCAAAGAAGATGTAGATTTGAAGGTGGATAAGTTAAATAAGCTGCAGTTATATTTGGATAAGCTCTCTTTTGCAAACACTGCCAATAGGGCCCAATCCTCACCCATTTCATGTTTGTCAGCTGATGAACTTGATAAGCAGGTAACACTATAATTACTATATTTCTGCGTTATGGGTTGAGTTTGTATAACTTTAAATTTATGACGTTAAAAGTTTGTTTATATAGATTTGAGAGCAAACTTACCAATCAAACACATGAGAATCTATAGACTCGAACTAAATTTAACCTTCCAAACTTTAAACTATATTTCAAAATTATAATAACTTAGAATCAAACCTATGAAATTTTCTTTTTTTCTTTGAGAAAGTATATGAAAGTATTGTTCATATGTAGATTTTATATACTGTCTGAAGTATGAATTCTACCTTGTTATATCATATTTGGTATTTGTCGGTCCTACAAATTATTTTAAAAGCCTTTGCAAAAAAAGTTGAAAAAGAAAAAGTTTGGTTAGAATACTTACTAATTATAGGAAGAACAATATATATATACACTCGACACACATGCTCCGATGGTCCCGACTTCTACCTCGTAGATTATATTTTGTGGGGCAAAAGTAATATTTACCTTCCAAAAATATTTTTGTTTACCTCGCTAAAAATTTGATATCGAGTTATTTTTTCTAACTTTTTTTTTCGTTCTTTATTTTTCTTTTCCCGCATTTCTCTCCTCTACTTCTAAAAAATATAACGATGATAAGTAGAGATTTCTATTAACCCACAAGACATAAGACGTTAGTAATATTTACTCTCCATATGCCAAATATCCTTTGTTCTAGATGGAGACTCTCACAAAAGTAAACTTAAAACACATCGTTATTATATTTATCTCTTCAACTTTTATTCTTGTGATGTTTTGGTCCCTGTAGTCACTTCCAACTAAACTTGCACTATTCTTACAGAGGTAAAAAATTATAATACAACCATTGGTAACCAAAATATGGATGAAATAATTAATTGGATACACAGAAATTGCAGTTCCTAATGCTACATAGAAGCCAAAATTTGGCCAATGAGAAGAGGCTATTAAGGGAGATCAAGAGGGAAGCTGGTGGAACAACACTTAATGAACTTGATGCTCCTGTACTTAAATCCATCCTTAATTTTTCTTTTTCTTGTGGGTTTCTGGATATATATGAATTAATTAATTTTCCTATTTGATTTTCTCGGAAACCAAACAGAACGAGAAGTTGCATGAGCAGATGAAGAACTCCCGTTTGTATTTATACAGAACAGATTTTGAAGAGATTCACAGAGAAATCAGAAGGCAAGGCTGTGGCCAATGCTGCAGTGGGGGGAGCCCTCTGGAGCTCTTTGGGATCAAAAAAACATATTCAACAACAAGTTAAAGTATAAAGAAATTAAATGGGAAAAATAATTAACTTTTTATTTTGTGAAAGAAAAAAAGAGAAGAAATCTTTGATTTAACAGCTAAATTATGATATTAAGTGCAGGTTATGAACGAGGAATTAGATGAGCTGAGGTCGAAGCAAGTTGAAGCTCGGAACGAAGTCAAGCTTCTCGAGAAAAAATTGAGGATTTTAGAAAAGCAAATAATGTTTTTGCATAAACAATTAAAGACTACTAATCATACATGGTGAATCAAATTAATATTCATCTGAGGTTATTAAATTTATCAATTTATTAAACGGAGTAGTTTTTTTTTTCTCCCAGTAAAGATAAAAAAAAACAATATTCCAATCTATTTGTAATTAATAAAGTAACGTCAAATATATATATATAGAAGTGTCTGTTTTTACGCATCTTTTTATTACTGTGATAAAATAATGTTTTTAGTTTACATTTACCTACTTTAGACTTTGTGGTATCATCTTTCAATTTTCATAGCTAAACCACACTAACATTGATTCTAAAAAATCTCAACAGTAATTTGTAACTCTTTTAGTACACTGAAATAGTAAGATTAAATTTAAATATCAAGCTTAGAAGTTTTTAGTAGTTTCTAAATTTTAAATTATTTTTAGTGGACTAATTCTAGATGAGTTTAGGCCAAAATGTTAAATTAAATAAAAGAATTTATGTATATAAAAATTAATTCAGCACAACTCTAAAGGTTGATGAATAATTAGTTTGAAATTATCTTTTTAAAGAAAACAAAGGCACCTACCACAAACATTTTTTCCTTTCTTTTGAGTTAAATAATTATGGAGGTTAGAAATTAAACCTTGTCTTAACGTGCTAGATGGATCCAAACTTGTAATTATAGCTAAAAATAATCATAATAACATAACATCTAATAATATGGTAAAAAATGACACAAAAGTTAGGAGAAGAAGGAAAAATTAGAGAGAAAGAAAAAAAGAGCAAAAAAGATTAACAGTTTTAATGAACCTCCCAAAAGCGAAGATGGACGCCATTAATAGCGCTGAAGAAAAATAGAAAATTAGAGGAACAAAATTATTGAAGGGGTGGGGGGTTCTAAATTTGAATTGATTAATTAACTAATTAAGAACATTTCAAGGATGGAAGAGAAAGACGGAGCTTTCTTCCGATTATAAGTACAATAATGGCGGCGGCAGATTTTGGTGCGCCGCTCTGCGACGTCGTTTTCTTGGCTCTTGCTCGTCTCCGTCTCGTCTTCATAGATGGTGTGCAGAGTAATTTGAATTTGGGCTCTCGAACCGCCGCCGTGGCGAGGCGGCGCAATCGCACAGAATCGGGTCAGCGCCGCCGGCGATGA

mRNA sequence

ATGGAGAAGCAATCTTCTTATTATGATCAGATTTCCCACACCCTTTCTCAAAAAATGTTGGAAGAAAAGGAAATGAATAACAAGGTAAGCTTTCTAAGATTTCAAGAACGATTGATCAAAGAAGATGTAGATTTGAAGGTGGATAAGTTAAATAAGCTGCAGTTATATTTGGATAAGCTCTCTTTTGCAAACACTGCCAATAGGGCCCAATCCTCACCCATTTCATGTTTGTCAGCTGATGAACTTGATAAGCAGGTTATGAACGAGGAATTAGATGAGCTGAGGTCGAAGCAAGTTGAAGCTCGGAACGAAGATGGAAGAGAAAGACGGAGCTTTCTTCCGATTATAAGTACAATAATGGCGGCGGCAGATTTTGGTGCGCCGCTCTGCGACGTCGTTTTCTTGGCTCTTGCTCGTCTCCGTCTCGTCTTCATAGATGGTGTGCAGAGTAATTTGAATTTGGGCTCTCGAACCGCCGCCGTGGCGAGGCGGCGCAATCGCACAGAATCGGGTCAGCGCCGCCGGCGATGA

Coding sequence (CDS)

ATGGAGAAGCAATCTTCTTATTATGATCAGATTTCCCACACCCTTTCTCAAAAAATGTTGGAAGAAAAGGAAATGAATAACAAGGTAAGCTTTCTAAGATTTCAAGAACGATTGATCAAAGAAGATGTAGATTTGAAGGTGGATAAGTTAAATAAGCTGCAGTTATATTTGGATAAGCTCTCTTTTGCAAACACTGCCAATAGGGCCCAATCCTCACCCATTTCATGTTTGTCAGCTGATGAACTTGATAAGCAGGTTATGAACGAGGAATTAGATGAGCTGAGGTCGAAGCAAGTTGAAGCTCGGAACGAAGATGGAAGAGAAAGACGGAGCTTTCTTCCGATTATAAGTACAATAATGGCGGCGGCAGATTTTGGTGCGCCGCTCTGCGACGTCGTTTTCTTGGCTCTTGCTCGTCTCCGTCTCGTCTTCATAGATGGTGTGCAGAGTAATTTGAATTTGGGCTCTCGAACCGCCGCCGTGGCGAGGCGGCGCAATCGCACAGAATCGGGTCAGCGCCGCCGGCGATGA

Protein sequence

MEKQSSYYDQISHTLSQKMLEEKEMNNKVSFLRFQERLIKEDVDLKVDKLNKLQLYLDKLSFANTANRAQSSPISCLSADELDKQVMNEELDELRSKQVEARNEDGRERRSFLPIISTIMAAADFGAPLCDVVFLALARLRLVFIDGVQSNLNLGSRTAAVARRRNRTESGQRRRR

Homology

[Close]

BLAST of Moc03g25650 vs. NCBI nr
Match: XP_016899262.1 (PREDICTED: uncharacterized protein LOC103489454 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 2.9e-13
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 2  EKQSSYYDQISHTLSQKMLEEKEMNNKVSFLRFQERLIKEDVDLKVDKLNKLQLYLDKLS 61
          E Q+ YYDQISH LS+KMLEE+EM   VS L++QE +IK +V LKV +LNKL L LDKLS
Sbjct: 3  ENQAYYYDQISHILSEKMLEEREMKWCVSNLKYQEEIIKREVKLKVQELNKLHLSLDKLS 62

Query: 62 FANTANRA-QSSPISCLSADELDKQ 86
          FAN A R  +    SCLS  ELD +
Sbjct: 63 FANNAYRVIKPKSTSCLSVGELDSK 87

[Close]

BLAST of Moc03g25650 vs. NCBI nr
Match: KAG7012544.1 (hypothetical protein SDJN02_25296, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 1  MEKQSSYYDQISHTLSQKMLEEKEMNNKVSFLRFQERLIKEDVDLKVDKLNKLQLYLDKL 60
          M +  + YD+IS +LSQKM+EE+EM   V  L++QE L+KE+V L V+KLNKLQL LDKL
Sbjct: 1  MAQTQACYDRISRSLSQKMVEEREMKWNVRHLKYQEELMKEEVKLVVEKLNKLQLCLDKL 60

Query: 61 SFANTANRAQSSPISCLSADELDKQ 86
          SF NTA +      SCLSA ELDKQ
Sbjct: 61 SFTNTAYKT----TSCLSAGELDKQ 81

[Close]

BLAST of Moc03g25650 vs. NCBI nr
Match: XP_022955117.1 (uncharacterized protein LOC111457179 isoform X1 [Cucurbita moschata])

HSP 1 Score: 81.3 bits (199), Expect = 9.4e-12
Identity = 50/85 (58.82%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1  MEKQSSYYDQISHTLSQKMLEEKEMNNKVSFLRFQERLIKEDVDLKVDKLNKLQLYLDKL 60
          M +  + YD+IS +LSQKM+EE+EM   V  L++QE LIKE+V L V+KLNKLQL LDKL
Sbjct: 1  MAQTQACYDRISRSLSQKMVEEREMKWNVRHLKYQEELIKEEVKLVVEKLNKLQLCLDKL 60

Query: 61 SFANTANRAQSSPISCLSADELDKQ 86
          SF NTA +      S LSA ELDKQ
Sbjct: 61 SFTNTAYKT----TSFLSAGELDKQ 81

[Close]

BLAST of Moc03g25650 vs. NCBI nr
Match: XP_022955118.1 (uncharacterized protein LOC111457179 isoform X2 [Cucurbita moschata])

HSP 1 Score: 81.3 bits (199), Expect = 9.4e-12
Identity = 50/85 (58.82%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1  MEKQSSYYDQISHTLSQKMLEEKEMNNKVSFLRFQERLIKEDVDLKVDKLNKLQLYLDKL 60
          M +  + YD+IS +LSQKM+EE+EM   V  L++QE LIKE+V L V+KLNKLQL LDKL
Sbjct: 1  MAQTQACYDRISRSLSQKMVEEREMKWNVRHLKYQEELIKEEVKLVVEKLNKLQLCLDKL 60

Query: 61 SFANTANRAQSSPISCLSADELDKQ 86
          SF NTA +      S LSA ELDKQ
Sbjct: 61 SFTNTAYKT----TSFLSAGELDKQ 81

[Close]

BLAST of Moc03g25650 vs. ExPASy TrEMBL
Match: A0A1S4DTD6 (uncharacterized protein LOC103489454 OS=Cucumis melo OX=3656 GN=LOC103489454 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 2  EKQSSYYDQISHTLSQKMLEEKEMNNKVSFLRFQERLIKEDVDLKVDKLNKLQLYLDKLS 61
          E Q+ YYDQISH LS+KMLEE+EM   VS L++QE +IK +V LKV +LNKL L LDKLS
Sbjct: 3  ENQAYYYDQISHILSEKMLEEREMKWCVSNLKYQEEIIKREVKLKVQELNKLHLSLDKLS 62

Query: 62 FANTANRA-QSSPISCLSADELDKQ 86
          FAN A R  +    SCLS  ELD +
Sbjct: 63 FANNAYRVIKPKSTSCLSVGELDSK 87

[Close]

BLAST of Moc03g25650 vs. ExPASy TrEMBL
Match: A0A6J1GSQ0 (uncharacterized protein LOC111457179 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457179 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-12
Identity = 50/85 (58.82%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1  MEKQSSYYDQISHTLSQKMLEEKEMNNKVSFLRFQERLIKEDVDLKVDKLNKLQLYLDKL 60
          M +  + YD+IS +LSQKM+EE+EM   V  L++QE LIKE+V L V+KLNKLQL LDKL
Sbjct: 1  MAQTQACYDRISRSLSQKMVEEREMKWNVRHLKYQEELIKEEVKLVVEKLNKLQLCLDKL 60

Query: 61 SFANTANRAQSSPISCLSADELDKQ 86
          SF NTA +      S LSA ELDKQ
Sbjct: 61 SFTNTAYKT----TSFLSAGELDKQ 81

[Close]

BLAST of Moc03g25650 vs. ExPASy TrEMBL
Match: A0A6J1GT27 (uncharacterized protein LOC111457179 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457179 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-12
Identity = 50/85 (58.82%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1  MEKQSSYYDQISHTLSQKMLEEKEMNNKVSFLRFQERLIKEDVDLKVDKLNKLQLYLDKL 60
          M +  + YD+IS +LSQKM+EE+EM   V  L++QE LIKE+V L V+KLNKLQL LDKL
Sbjct: 1  MAQTQACYDRISRSLSQKMVEEREMKWNVRHLKYQEELIKEEVKLVVEKLNKLQLCLDKL 60

Query: 61 SFANTANRAQSSPISCLSADELDKQ 86
          SF NTA +      S LSA ELDKQ
Sbjct: 61 SFTNTAYKT----TSFLSAGELDKQ 81

The following BLAST results are available for this feature:

BLAST of Moc03g25650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899262.1	2.9e-13	60.00	PREDICTED: uncharacterized protein LOC103489454 [Cucumis melo]	[more]
KAG7012544.1	1.1e-12	58.82	hypothetical protein SDJN02_25296, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022955117.1	9.4e-12	58.82	uncharacterized protein LOC111457179 isoform X1 [Cucurbita moschata]	[more]
XP_022955118.1	9.4e-12	58.82	uncharacterized protein LOC111457179 isoform X2 [Cucurbita moschata]	[more]

BLAST of Moc03g25650 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g25650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DTD6	1.4e-13	60.00	uncharacterized protein LOC103489454 OS=Cucumis melo OX=3656 GN=LOC103489454 PE=...	[more]
A0A6J1GSQ0	4.6e-12	58.82	uncharacterized protein LOC111457179 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GT27	4.6e-12	58.82	uncharacterized protein LOC111457179 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Moc03g25650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g25650.1	Moc03g25650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity