Moc03g25640 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g25640
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Locationchr3: 18447021 .. 18448154 (-)
RNA-Seq ExpressionMoc03g25640
SyntenyMoc03g25640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCCACTTCTCGATTGGCCAGGTTTATAAGCGAGGCTTGCCCTCCTCAAGTCGTCTCCGTCATGAGGCGCAGAACCCCCAAAGTTCTGGACACCATTAACGAAGAAGACTACAGAGAAGCCCTAGCCTCCTCCTCCACCTCCTTGAAGATCGACAAATTCTCCGCTGCTTCACCGATGTCTCCCATGGCCGCGACGCCGCCTTCTCCTGCAACTTCCGCCGCCGTTAATTCCAAATACTATCTCAATCAGGTCCCCTTGAGGTCTAATTTCCCCATTTTCTAGTTTCAATGGCTGCTTCGGGCGGCGCGGCGAATTAACCCTCCGAATCTGTTGTTTGCTTTTTGCGCCGATCGGGTCGGGTCCTTCCTGGCCGGAATTGGTGTTTGTATATATCGGGTCGACGGCGGATGCGGGTGCCGCCGGTCAAGAGATGGTGGAAAGTTTTTACTTGTTTCTGTTCTTTAATTTTGTCGTCCATTTTATGTTTTGTGCAATTTTAAGTGCTGCGGCTGCGCTTCTAATAAGAATTAAATGGTTTCGATATAAGTAGCCTTCAATAATGTTTCCAAAAGAATTATTTGTTTGTCAAAATTTTGATATAAATTTGCTAAAACTTGGGAATAATATTAAGAGTAGAAAAAAAAAATGGAGATTTGTTGTTAAAAATGATAAAACATTTTTATAAGAAACCAAAATTAGATAATAGTATTTGATTTTGTTTTTTCTTTTTAGTTCATCTGAATTCTGATGATATATATTATCTGGTTGAGGACAATATACAAGTCCTTTTCAAGAGAATAACATATATGTTGATGTCTAACATCTTATCCAATAAAATTGTAGTGATTGTAAATAATAAATAATGATAATAAATAATCGTAGCAAAATGTGCAGCAAACGAAATATGATCTTTCTTTTTTTTGCGTGATTTTTACTAATAATACACCGGTGTAAACTTTGAATTTCCTTCGCAGTTTAACAGTTAAATAAAAAATAAAAAAGTAATAAGAATCAGAGGGGTTAAGTTTTTTATCATCCTGACGTCGAGCTATTTTTTCATAGGACCTCCCCGCAGTAGAGTTTAACCACCAAGTACGGGATGGATTGGTGTGGTTCTTCTACGTCTAG

mRNA sequence

ATGGCAGCCACTTCTCGATTGGCCAGGTTTATAAGCGAGGCTTGCCCTCCTCAAGTCGTCTCCGTCATGAGGCGCAGAACCCCCAAAGTTCTGGACACCATTAACGAAGAAGACTACAGAGAAGCCCTAGCCTCCTCCTCCACCTCCTTGAAGATCGACAAATTCTCCGCTGCTTCACCGATGTCTCCCATGGCCGCGACGCCGCCTTCTCCTGCAACTTCCGCCGCCGTTAATTCCAAATACTATCTCAATCAGGACCTCCCCGCAGTAGAGTTTAACCACCAAGTACGGGATGGATTGGTGTGGTTCTTCTACGTCTAG

Coding sequence (CDS)

ATGGCAGCCACTTCTCGATTGGCCAGGTTTATAAGCGAGGCTTGCCCTCCTCAAGTCGTCTCCGTCATGAGGCGCAGAACCCCCAAAGTTCTGGACACCATTAACGAAGAAGACTACAGAGAAGCCCTAGCCTCCTCCTCCACCTCCTTGAAGATCGACAAATTCTCCGCTGCTTCACCGATGTCTCCCATGGCCGCGACGCCGCCTTCTCCTGCAACTTCCGCCGCCGTTAATTCCAAATACTATCTCAATCAGGACCTCCCCGCAGTAGAGTTTAACCACCAAGTACGGGATGGATTGGTGTGGTTCTTCTACGTCTAG

Protein sequence

MAATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASPMSPMAATPPSPATSAAVNSKYYLNQDLPAVEFNHQVRDGLVWFFYV
Homology
BLAST of Moc03g25640 vs. NCBI nr
Match: KAG7019500.1 (hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 72/85 (84.71%), Postives = 79/85 (92.94%), Query Frame = 0

Query: 1  MAATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASP 60
          MAATSRLARFISEACPPQ VSVMRRR+PKVLDTINEED+REAL SSS+SLKIDKFS +S 
Sbjct: 1  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREAL-SSSSSLKIDKFSVSSL 60

Query: 61 MSPMAATPPSPATSAAVNSKYYLNQ 86
           S MAA+PPSPATSAAV+SKY+LNQ
Sbjct: 61 PSTMAASPPSPATSAAVSSKYFLNQ 84

BLAST of Moc03g25640 vs. NCBI nr
Match: KAG6583880.1 (hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-21
Identity = 65/76 (85.53%), Postives = 70/76 (92.11%), Query Frame = 0

Query: 1  MAATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASP 60
          MAATSRLARFISEACPPQ VSVMRRR+PKVLDTINEED+REAL SSS+SLKIDKFS +S 
Sbjct: 1  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREAL-SSSSSLKIDKFSVSSL 60

Query: 61 MSPMAATPPSPATSAA 77
           S MAA+PPSPATSAA
Sbjct: 61 PSTMAASPPSPATSAA 75

BLAST of Moc03g25640 vs. NCBI nr
Match: KAA0054015.1 (hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa] >TYK20701.1 hypothetical protein E5676_scaffold480G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 6.7e-21
Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 0

Query: 1  MAATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASP 60
          MAATSRLARFISEACPPQ VSVMRRR+PKVLDTINEED RE+LASSS S KIDKFS +SP
Sbjct: 1  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSS-SFKIDKFSVSSP 60

Query: 61 MSPMAATPPSPATSAAVNSKYYLNQ 86
           S     P S A +AAVNSKY+L+Q
Sbjct: 61 PS-----PASSAAAAAVNSKYFLDQ 79

BLAST of Moc03g25640 vs. NCBI nr
Match: KGN65872.1 (hypothetical protein Csa_023250 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-19
Identity = 61/85 (71.76%), Postives = 69/85 (81.18%), Query Frame = 0

Query: 1  MAATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASP 60
          MAATSRLARFISEACPPQ VSVMRRR+P+VLDTINEED REAL SSS S KIDKFS  SP
Sbjct: 1  MAATSRLARFISEACPPQFVSVMRRRSPRVLDTINEEDQREALVSSS-SFKIDKFSVPSP 60

Query: 61 MSPMAATPPSPATSAAVNSKYYLNQ 86
           SP        +++AA+NSKY+L+Q
Sbjct: 61 PSP-------DSSAAAINSKYFLDQ 77

BLAST of Moc03g25640 vs. NCBI nr
Match: KAF7842889.1 (uncharacterized protein G2W53_005187 [Senna tora])

HSP 1 Score: 77.8 bits (190), Expect = 6.3e-11
Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 0

Query: 3  ATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALAS--SSTSLKIDKFSAASP 62
          A SR+ARFI E  PPQ V+VMR RT K+LDTI EED RE  +S  SS+S K    S++SP
Sbjct: 2  ANSRIARFIMEVAPPQYVTVMRHRTSKMLDTITEEDQREISSSNNSSSSPKGSSSSSSSP 61

Query: 63 MSPMAATPPSPATSAAV---NSKYYLNQ 86
          +SP++++P + A+SA++   NSKY+L +
Sbjct: 62 LSPLSSSPSASASSASIPNGNSKYFLKE 89

BLAST of Moc03g25640 vs. ExPASy TrEMBL
Match: A0A5A7UJX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00970 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.2e-21
Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 0

Query: 1  MAATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASP 60
          MAATSRLARFISEACPPQ VSVMRRR+PKVLDTINEED RE+LASSS S KIDKFS +SP
Sbjct: 1  MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDQRESLASSS-SFKIDKFSVSSP 60

Query: 61 MSPMAATPPSPATSAAVNSKYYLNQ 86
           S     P S A +AAVNSKY+L+Q
Sbjct: 61 PS-----PASSAAAAAVNSKYFLDQ 79

BLAST of Moc03g25640 vs. ExPASy TrEMBL
Match: A0A0A0LYE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534780 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.0e-19
Identity = 61/85 (71.76%), Postives = 69/85 (81.18%), Query Frame = 0

Query: 1  MAATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASP 60
          MAATSRLARFISEACPPQ VSVMRRR+P+VLDTINEED REAL SSS S KIDKFS  SP
Sbjct: 1  MAATSRLARFISEACPPQFVSVMRRRSPRVLDTINEEDQREALVSSS-SFKIDKFSVPSP 60

Query: 61 MSPMAATPPSPATSAAVNSKYYLNQ 86
           SP        +++AA+NSKY+L+Q
Sbjct: 61 PSP-------DSSAAAINSKYFLDQ 77

BLAST of Moc03g25640 vs. ExPASy TrEMBL
Match: A0A314XQS6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10926 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.1e-08
Identity = 47/90 (52.22%), Postives = 55/90 (61.11%), Query Frame = 0

Query: 1  MAATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALAS-----SSTSLKIDKF 60
          M A SRLARFI+E  PPQ VSVMR RT KVLDTINEE+   A  S     SS+S K    
Sbjct: 1  MMANSRLARFITEVAPPQFVSVMRHRTSKVLDTINEEEREYANTSNDSLISSSSFKGCAC 60

Query: 61 SAASPMSPMAATPPSPATSAAVNSKYYLNQ 86
          S +SP  P  A+  S A +A   SKY+L +
Sbjct: 61 STSSP--PSFASAASGAAAAGTESKYFLKE 88

BLAST of Moc03g25640 vs. ExPASy TrEMBL
Match: A0A4Y7K232 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_009698 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 9.2e-08
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0

Query: 3  ATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREA----LASSSTSLKIDKFSAA 62
          ATSR+ RF+ E  PPQ VSVMRRRTPK+LDTI EED+R+A      ++ +S    KFS+ 
Sbjct: 2  ATSRVGRFVMEVAPPQFVSVMRRRTPKMLDTIVEEDHRDAGNFTNENNLSSFSSSKFSSP 61

Query: 63 SPMS-PMAATPPSPATSAAVNSKYYLN 85
          S  S  MA    +  TS++ +S Y++N
Sbjct: 62 SSSSFQMATKAKAILTSSSSSSNYFIN 88

BLAST of Moc03g25640 vs. ExPASy TrEMBL
Match: A0A2P6Q5Q7 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0014631 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 9.2e-08
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 0

Query: 3   ATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASPMS 62
           A +RLARFI+EA PPQ+VSVMRRRT KVLDTI EED RE  + + +     K S+A P S
Sbjct: 53  ANARLARFITEAAPPQIVSVMRRRTSKVLDTITEED-REYASPNDSLNSSPKGSSALPSS 112

Query: 63  PMAATPPSPATSAAVNSKYYL 84
             +A     A +A  ++KY+L
Sbjct: 113 SPSAPSFGSAAAAGTDAKYFL 132

BLAST of Moc03g25640 vs. TAIR 10
Match: AT1G30260.1 (BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-08
Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 0

Query: 3  ATSRLARFISEACPPQVVSVMRRRTPKVLDTINEEDYREALASSSTSLKIDKFSAASPM- 62
          ATSRLARFI+E  PPQ V+VMRRRT KVLDTI EE+ RE    S      +    +SP  
Sbjct: 2  ATSRLARFITEVAPPQFVTVMRRRTAKVLDTIKEEE-REVGTDSIFPSSFNSKKISSPFT 61

Query: 63 SPMAATPPSPATSAAVNS 80
          SP +++  S + SA+  S
Sbjct: 62 SPYSSSVSSASASASCTS 78

BLAST of Moc03g25640 vs. TAIR 10
Match: AT4G21060.1 (Galactosyltransferase family protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.4e-05
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0

Query: 3  ATSRLARFISEACPPQVVSVMRRR--TPKVLDTINEEDYRE 42
          ATSRLARF+SE  PPQ V+VMRR     + LDTI EE+ +E
Sbjct: 2  ATSRLARFVSEVAPPQFVTVMRRHRAAKQKLDTIKEEENKE 42

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7019500.12.4e-2684.71hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6583880.11.0e-2185.53hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0054015.16.7e-2176.47hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa] >TYK2070... [more]
KGN65872.12.2e-1971.76hypothetical protein Csa_023250 [Cucumis sativus][more]
KAF7842889.16.3e-1152.27uncharacterized protein G2W53_005187 [Senna tora][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UJX73.2e-2176.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LYE61.0e-1971.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534780 PE=4 SV=1[more]
A0A314XQS64.1e-0852.22Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_109... [more]
A0A4Y7K2329.2e-0848.28Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_009698 PE=4 SV=1[more]
A0A2P6Q5Q79.2e-0851.85Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0014631 PE=4... [more]
Match NameE-valueIdentityDescription
AT1G30260.12.4e-0850.00BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein... [more]
AT4G21060.11.4e-0560.98Galactosyltransferase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35101OS02G0162600 PROTEINcoord: 2..85
NoneNo IPR availablePANTHERPTHR35101:SF12OS02G0162600 PROTEINcoord: 2..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g25640.1Moc03g25640.1mRNA