Moc03g25080 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g25080
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr3: 18029986 .. 18030259 (-)
RNA-Seq ExpressionMoc03g25080
SyntenyMoc03g25080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGGTACCGATATTGCTGCAACAGTCATCAACGACAACAAGTGGCGTCATCAGATGAAGATTTCTGCTTCAGGTGATTTAGGGGGAATAGATGCGTCTCTATCTTTGGATTATGAGTCGGATACTTCCTTCATGTGAAGCGGATTCCCCAGTGTTTGCGTATGCTTCTATCAATGCGTCTTCGGATTCGGCTTTAGCTGAGACTTCCGTTTCTCTAGTGGCAGCAGCTTCTTCAGATGCCGAAGAAAGAAGAATAATCCGATTTGACTGA

mRNA sequence

ATGACCGGTACCGATATTGCTGCAACAGTCATCAACGACAACAAGTGGCGTCATCAGATGAAGATTTCTGCTTCAGCGGATTCCCCAGTGTTTGCGTATGCTTCTATCAATGCGTCTTCGGATTCGGCTTTAGCTGAGACTTCCGTTTCTCTAGTGGCAGCAGCTTCTTCAGATGCCGAAGAAAGAAGAATAATCCGATTTGACTGA

Coding sequence (CDS)

ATGACCGGTACCGATATTGCTGCAACAGTCATCAACGACAACAAGTGGCGTCATCAGATGAAGATTTCTGCTTCAGCGGATTCCCCAGTGTTTGCGTATGCTTCTATCAATGCGTCTTCGGATTCGGCTTTAGCTGAGACTTCCGTTTCTCTAGTGGCAGCAGCTTCTTCAGATGCCGAAGAAAGAAGAATAATCCGATTTGACTGA

Protein sequence

MTGTDIAATVINDNKWRHQMKISASADSPVFAYASINASSDSALAETSVSLVAAASSDAEERRIIRFD
Homology
[Close]
BLAST of Moc03g25080 vs. NCBI nr
Match: EXC33543.1 (hypothetical protein L484_006107 [Morus notabilis])

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-06
Identity = 38/64 (59.38%), Postives = 44/64 (68.75%), Query Frame = 0 

Query: 1  MTGTDIAATVINDNKWRHQMKISASADSPVFAYASINASSDSALAETSVSLVAAASSDAE 60
          MTGT   AT IN NKWRH+MK SA  DS        +ASSDSA A+TS+SLVAAASSD+ 
Sbjct: 1  MTGTGAVATSINGNKWRHRMKTSALGDS------GADASSDSAFADTSLSLVAAASSDSA 58

Query: 61 ERRI 65
            R+
Sbjct: 61 SERV 58

[Close]
BLAST of Moc03g25080 vs. ExPASy TrEMBL
Match: W9SL12 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006107 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.5e-07
Identity = 38/64 (59.38%), Postives = 44/64 (68.75%), Query Frame = 0 

Query: 1  MTGTDIAATVINDNKWRHQMKISASADSPVFAYASINASSDSALAETSVSLVAAASSDAE 60
          MTGT   AT IN NKWRH+MK SA  DS        +ASSDSA A+TS+SLVAAASSD+ 
Sbjct: 1  MTGTGAVATSINGNKWRHRMKTSALGDS------GADASSDSAFADTSLSLVAAASSDSA 58

Query: 61 ERRI 65
            R+
Sbjct: 61 SERV 58

The following BLAST results are available for this feature:
BLAST of Moc03g25080 vs. NCBI nr
Match NameE-valueIdentityDescription
EXC33543.11.3e-0659.38hypothetical protein L484_006107 [Morus notabilis][more]
BLAST of Moc03g25080 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc03g25080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
W9SL126.5e-0759.38Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006107 PE=4 SV=1[more]
BLAST of Moc03g25080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g25080.1Moc03g25080.1mRNA