Moc03g24120 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g24120
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Pentatricopeptide repeat-containing protein
Location	chr3: 17148124 .. 17151793 (-)
RNA-Seq Expression	Moc03g24120
Synteny	Moc03g24120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGTGAGCCCGAACAGGTTAAAGTTACGAACTCTTTTATTAGCATTTTAATTTCATGATGTGTCTTATTTGCTTTAGTACGGGTATGATGGATCGAAGAATATCTTGGATACTGAAGCTGAAACTTATAAATTCTGTTTTTGGGTTGCGAATATATCTTTACGATACTTTATTATTATGTAAATGCTTGATGACTATTCTTTCCTTTTCATTTTCTGAATCAGGATCTTGTAAATTAGTTAATCTAGCAACGGGGATATCTAATCTGCTTGTTACATTTTGAAATGTTAATATTTGGTTTTCATTTTGCATGAAAATAGTTCATAATGAGAACATTTAGAGAAAAGGCATATTGTATTATTAATTACTTCTGAGAGGATCATCTGATTTTTGACTGCTACCGAGGCTTAATTGGGTGAATGGACATTATCATGGAAGATGGAGTCAATTAATCTAGCCACGCTAGTGCAGATTCACCATGTCTGGTTTGCCCTATGTTCAATTCAGTTTCTTGAATGCATGTGTAAATTGAAACCAAATGGAAGAAGCATAGCTTCTACATTTAGACAGCCAGAGAACAAGTAAATAACGGGGTTGTTGGACAGATCAGTTGAATATCCAATAGAAATCCACTCTTCAATTTCTTCATCCTTTCAGATCCCACTCAACCTAAAGTCTCATGAGGTATTATGAGGAGACCAAGATTGAGTAAGGCCCTTCTTACCTGAAAAGGTGAAAAGATTTGGGAAGTCATCGCACAAAAGAGCCGACCCCATGGTTCCACCAACTATCCTCCCAAAATTTGCCATAGTTCCCATTACTCACAATAATAGAAACTTCTCCCAAAGAATGCTTCTCAGATTAAGGATAGTCTTCCAGGAACTTCTTGGATTAACCAAACTAACACCCACCTGAAACCCAGCCACCAAGATCAATACCGAACTTAGTAACAATCATTTAATGTCATTATGTCTTCTCTTCCAAAGGAGATTTCCAAATCCAACAAGGAAAACTGCCATATTATACTGTACATAAGGTTGACAATCCCTAGGCCACCCCTTCCAAATGGGAGAGAGAGATGCTATTCTCCTGTTAATTAGGTGGGACGCACCATCAAACTTGGCGCTTCCTGTTCCTGTGAAGTTTCTAATTTTCTTCTCAATTTCAAAGACGAGAAGAAATAAATAGGAATTTCGGAGAGAACCAACTAATTGAACTTTAAAGTAATCTGCGTTCCTTTGGAGTGACAAGCATGCTTCAATTGTCGAGCCTGCAAGAAATATTTTAGAAAATCAGATATGAAAATGCCTTAGGCTTAGGAGTACCTAGCAACGAAAAATGCAAATATGAAAGAGATCAATCTCCTGCTGGGCACCCGAATCCTCAGTCACTTTCCTGACCTCTTAAATGGAGCAATTAATACCAGCCACGATATGTTTAGCCATTGATCTAATAGCCTGAAGCTTTTGTAAAGATAATGACAATCCTGAATAAAAGCACTGGAATCTACTGTAGTATTCATGTGGATTTCAAATTGTTTTTTGATTTTTAACCTTTTCCCGTCTAGCCTAATAATCAGAGATTTATGCAGGAAAGTAAGTCTCATATGGCTCTAAAGATATTTGATGAAATGAGAAGTCAAAGGTGCAAACCTAACATCTGCACCTTTACAGCTTTAGTAAACGCATTTGCTAGAGAGGGACTTTGTGAGAAAGCAGAAGAAATATTTGAACAACTGCAAGAGGCTGGTTATGAGCCTGATGTCTACGCTTATAATGCCCTCATGGAAGCATATAGGTAAAACTAATCTCGGACAACCTTCTTGTAGATATAGTCTTGATTCTCGAAATTTAGTGTGATTTCACTGTTCATTTCAAAATGGATGACAGTATTTTGAAGGCCTGGCCATATGGACCTTGATGACCGGTGATCTTTAGTAGGCAATTGAATTGAATGATCCTGTTCTAATTGTTCACATCATATTTCTGAATTCTGATTATAAGTGTATCAATTTCCTTCTAGTTTAATTATGCATCATGCCGCAACTAAGATCAATGTAGAAGAATTGCTTATAAATTTGCTGCTCTGTTCTTAAGCTTTATGTTTTCATGCATTAGAAAAATTCAGATTACAGTAATATCCTTTAGATGTAACTTTCTCTCCGGTAAAAAGTGTACCTTTTTCGTCATCGCAGTCGTGCTGGTTTTCCATATGGAGCTGCAGAAATTTTTTCACTAATGCAACATATGGGATGTGAACCAGATAGAGCATCGTACAATATCATGGTGGATGCGTATGGAAGAGCTGGTCTACATGAGGGTATGTAAACTTAAATGATATATTTAGGTTCCATTTGATAACCATTTTATTTTTAGTTTCCTGTTTTTGGAAATTAAACTTGTTCCTTGCCATTTCTTTAACATACAACTGAATTTTTAGCTAAATTTCAAAAACAAAAACAAGTTTTCGAAAACTATATATATATATATATATATATTTTTAATATTAGGCAGATTTTGAAATCGGTTTTAAAAAGTTGGTAGCAAATCATATAAGCACAAGTGGTGTTTATAAGCTTAATTTTCAAAACCATAAAACGAAAAACAAAATGGTTATCAGCGAAGCCTTACTGATATTTCTTCACTCATTGCATAATCCCTATTATTTTGTTTTCTTTGTATTAAATTCAAAATATATAAAATACTTAGAATTGTATAGTTTTTCTCTAATTTGTTGTCCTTACTTTTTATTTTTTTTTTGTCCTTAAATGTTTTAAATTAATAGGTTATATATATAAAAGGTTAGAATGTGAAATTTTGCCCCATCTTAAGAAAATTTCTGGCTTCACCCCTGAACATACGAAACAAAGATAACCAACTCAAATCATGTACCTTGCAATAGGAAGGTTGCATTCACAGACAAGGGAAGGATCTAAATTCTAAATGTAAAGCATGTGTTCAAATTGATGCATGCTGCCATTATTTTTCCACCATTTTCCTCAAGCACGCAATCAACTTCTATCATTCATTCTCTTTCACAAATGAATGCTTTTCTAACTCTAATTCTTGTGCAATTCAGATGCGCAATCCGTTTTCGAAGAGATGAAACGAATCGGTATAACCCCGACAATGAAATCCCACATGCTTCTTTTATCTGCCCATTCAAACGCTGGCAATGCAGCTAAATGTGAAGATATTATAGGCCAAATGCACAAATCTGGCCTCAAACCAGACACATTTGTTCTCAACAGCATGCTTAATCTTTACGGCCGTTTAGGCCAATTTGGAAAAATGGAAGCTCTTCTATCTACAATGCAAAAAGGGTCATCATTTAGAGCAGATATCAGCACATACAACATCTTGATCAATGTGTATGGGCGAGCAGGTTTTCTGGAGAGAATGGAGGAGCTGTTCCTGTTGCTTCCAGCAAAGAATTTAGAACCCGACGTCGTGACGTGGACTTCTCGGATTGGTGCATACTCCAGAAAGAAGCTTTATAAAAGATGCTTGGAAATATTTGAACAGATGATTGATGCTGGTTGTTATCCAGATGGGGGAACTGCCAAAGTACTTCTCTCAGCATGTTCTAGTGAAGAGCAGATTGAACAGGTAACCAATGTTATTAGAACAATGCACAAGGATGTCAAAACTGTATTGCCTGTCTGA

mRNA sequence

ATGGAAAGTCGTGCTGGTTTTCCATATGGAGCTGCAGAAATTTTTTCACTAATGCAACATATGGGATGTGAACCAGATAGAGCATCGTACAATATCATGGTGGATGCGTATGGAAGAGCTGGTCTACATGAGGATGCGCAATCCGTTTTCGAAGAGATGAAACGAATCGGTATAACCCCGACAATGAAATCCCACATGCTTCTTTTATCTGCCCATTCAAACGCTGGCAATGCAGCTAAATGTGAAGATATTATAGGCCAAATGCACAAATCTGGCCTCAAACCAGACACATTTGTTCTCAACAGCATGCTTAATCTTTACGGCCGTTTAGGCCAATTTGGAAAAATGGAAGCTCTTCTATCTACAATGCAAAAAGGGTCATCATTTAGAGCAGATATCAGCACATACAACATCTTGATCAATGTGTATGGGCGAGCAGGTTTTCTGGAGAGAATGGAGGAGCTGTTCCTGTTGCTTCCAGCAAAGAATTTAGAACCCGACGTCGTGACGTGGACTTCTCGGATTGGTGCATACTCCAGAAAGAAGCTTTATAAAAGATGCTTGGAAATATTTGAACAGATGATTGATGCTGGTTGTTATCCAGATGGGGGAACTGCCAAAGTACTTCTCTCAGCATGTTCTAGTGAAGAGCAGATTGAACAGGTAACCAATGTTATTAGAACAATGCACAAGGATGTCAAAACTGTATTGCCTGTCTGA

Coding sequence (CDS)

ATGGAAAGTCGTGCTGGTTTTCCATATGGAGCTGCAGAAATTTTTTCACTAATGCAACATATGGGATGTGAACCAGATAGAGCATCGTACAATATCATGGTGGATGCGTATGGAAGAGCTGGTCTACATGAGGATGCGCAATCCGTTTTCGAAGAGATGAAACGAATCGGTATAACCCCGACAATGAAATCCCACATGCTTCTTTTATCTGCCCATTCAAACGCTGGCAATGCAGCTAAATGTGAAGATATTATAGGCCAAATGCACAAATCTGGCCTCAAACCAGACACATTTGTTCTCAACAGCATGCTTAATCTTTACGGCCGTTTAGGCCAATTTGGAAAAATGGAAGCTCTTCTATCTACAATGCAAAAAGGGTCATCATTTAGAGCAGATATCAGCACATACAACATCTTGATCAATGTGTATGGGCGAGCAGGTTTTCTGGAGAGAATGGAGGAGCTGTTCCTGTTGCTTCCAGCAAAGAATTTAGAACCCGACGTCGTGACGTGGACTTCTCGGATTGGTGCATACTCCAGAAAGAAGCTTTATAAAAGATGCTTGGAAATATTTGAACAGATGATTGATGCTGGTTGTTATCCAGATGGGGGAACTGCCAAAGTACTTCTCTCAGCATGTTCTAGTGAAGAGCAGATTGAACAGGTAACCAATGTTATTAGAACAATGCACAAGGATGTCAAAACTGTATTGCCTGTCTGA

Protein sequence

MESRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTMKSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLSTMQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV

Homology

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BLAST of Moc03g24120 vs. NCBI nr
Match: XP_022142649.1 (pentatricopeptide repeat-containing protein At2g35130 [Momordica charantia])

HSP 1 Score: 478.8 bits (1231), Expect = 2.8e-131
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM
Sbjct: 341 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST
Sbjct: 401 KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV
Sbjct: 521 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 577

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BLAST of Moc03g24120 vs. NCBI nr
Match: XP_038895421.1 (pentatricopeptide repeat-containing protein At2g35130 isoform X1 [Benincasa hispida])

HSP 1 Score: 452.6 bits (1163), Expect = 2.1e-123
Identity = 222/237 (93.67%), Postives = 232/237 (97.89%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAGFPYGAAEIFSLMQHMGCEPDRASYNI+VDAYGRAGLHEDAQ+VFEEMKRIGITPTM
Sbjct: 341 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIVVDAYGRAGLHEDAQAVFEEMKRIGITPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+SNAGN AKCEDIIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKME LLST
Sbjct: 401 KSHMLLLSAYSNAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLLST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           M+KG  +RADISTYNILINVYGRAGF+ERMEELF LLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MEKG-PYRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLEIFE+MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNV+RTMHKDVKT+LPV
Sbjct: 521 LYKRCLEIFEEMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPV 576

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BLAST of Moc03g24120 vs. NCBI nr
Match: XP_038895422.1 (pentatricopeptide repeat-containing protein At2g35130 isoform X2 [Benincasa hispida])

HSP 1 Score: 452.6 bits (1163), Expect = 2.1e-123
Identity = 222/237 (93.67%), Postives = 232/237 (97.89%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAGFPYGAAEIFSLMQHMGCEPDRASYNI+VDAYGRAGLHEDAQ+VFEEMKRIGITPTM
Sbjct: 249 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIVVDAYGRAGLHEDAQAVFEEMKRIGITPTM 308

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+SNAGN AKCEDIIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKME LLST
Sbjct: 309 KSHMLLLSAYSNAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLLST 368

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           M+KG  +RADISTYNILINVYGRAGF+ERMEELF LLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 369 MEKG-PYRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKK 428

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLEIFE+MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNV+RTMHKDVKT+LPV
Sbjct: 429 LYKRCLEIFEEMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPV 484

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BLAST of Moc03g24120 vs. NCBI nr
Match: XP_008459028.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g35130 [Cucumis melo])

HSP 1 Score: 450.3 bits (1157), Expect = 1.0e-122
Identity = 222/237 (93.67%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ+VFEEMKRIGITPTM
Sbjct: 341 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+S AGNAAKCEDIIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKME L ST
Sbjct: 401 KSHMLLLSAYSKAGNAAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           MQKG   RADISTYNILINVYGRAGF+ERMEELF LLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MQKGPC-RADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLE+FE+MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNV+RTMHKDVKT+LPV
Sbjct: 521 LYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPV 576

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BLAST of Moc03g24120 vs. NCBI nr
Match: XP_004145440.1 (pentatricopeptide repeat-containing protein At2g35130 [Cucumis sativus] >KGN66867.1 hypothetical protein Csa_007332 [Cucumis sativus])

HSP 1 Score: 448.0 bits (1151), Expect = 5.2e-122
Identity = 220/237 (92.83%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ+VFEEMKRIGITPTM
Sbjct: 341 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+S+AGN AKCEDIIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKME L ST
Sbjct: 401 KSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           MQKG   RADISTYNILINVYGRAGF+ERMEELF LLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MQKGPC-RADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLE+FE+MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNV+RTMHKD+KT+LPV
Sbjct: 521 LYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDLKTLLPV 576

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BLAST of Moc03g24120 vs. ExPASy Swiss-Prot
Match: O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 9.6e-103
Identity = 180/231 (77.92%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAG+PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH DA++VFEEMKR+GI PTM
Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+S A +  KCE I+ +M ++G++PDTFVLNSMLNLYGRLGQF KME +L+ 
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           M+ G    ADISTYNILIN+YG+AGFLER+EELF+ L  KN  PDVVTWTSRIGAYSRKK
Sbjct: 465 MENGPC-TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 524

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDV 234
           LY +CLE+FE+MID+GC PDGGTAKVLLSACSSEEQ+EQVT+V+RTMHK V
Sbjct: 525 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 574

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BLAST of Moc03g24120 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 59/228 (25.88%), Postives = 111/228 (48.68%), Query Frame = 0


Query: 3   SRAGFPY-GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPT 62
           +R G  + G   +F+ M+H G +PD  +YN ++ A    GL ++A+ VF  M   GI P 
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281

Query: 63  MKSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLS 122
           + ++  L+          K  D++G+M   G  PD    N +L  Y + G   +   +  
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341

Query: 123 TMQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRK 182
            MQ  +    + +TY++L+N++G++G  + + +LFL + + N +PD  T+   I  +   
Sbjct: 342 QMQ-AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 401

Query: 183 KLYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTM 230
             +K  + +F  M++    PD  T + ++ AC      E    +++ M
Sbjct: 402 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448

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BLAST of Moc03g24120 vs. ExPASy Swiss-Prot
Match: Q9SSF9 (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana OX=3702 GN=At1g74750 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.8e-23
Identity = 58/226 (25.66%), Postives = 111/226 (49.12%), Query Frame = 0


Query: 4   RAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTMK 63
           RA +   A  +F+ MQ  GCEPDR +Y  ++D + +AG  + A  +++ M+  G++P   
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTF 465

Query: 64  SHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLSTM 123
           ++ ++++    AG+      +  +M   G  P+    N M+ L+ +   +     L   M
Sbjct: 466 TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525

Query: 124 QKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKKL 183
           Q  + F+ D  TY+I++ V G  GFLE  E +F  +  KN  PD   +   +  + +   
Sbjct: 526 Q-NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 585

Query: 184 YKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTM 230
             +  + ++ M+ AG  P+  T   LLS      ++ +  N++++M
Sbjct: 586 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630

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BLAST of Moc03g24120 vs. ExPASy Swiss-Prot
Match: Q9LYT2 (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana OX=3702 GN=At3g59040 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 9.8e-23
Identity = 60/226 (26.55%), Postives = 114/226 (50.44%), Query Frame = 0


Query: 10  GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTMKSHMLLL 69
           GA  + S++  MG  P+  SY  ++++YGR G   +A+++F  M+  G  P+  ++ ++L
Sbjct: 157 GAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIIL 216

Query: 70  SAHSNAGNAAKCEDIIGQM---HKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLSTMQKG 129
                     + E++   +    KS LKPD  + + M+ +Y + G + K   + S+M  G
Sbjct: 217 KTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM-VG 276

Query: 130 SSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 189
                   TYN L++        + + +++  +   +++PDVV++   I AY R +  + 
Sbjct: 277 KGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 336

Query: 190 CLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKD 233
            L +FE+M+DAG  P      +LL A +    +EQ   V ++M +D
Sbjct: 337 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378

[Close]

BLAST of Moc03g24120 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-22
Identity = 58/207 (28.02%), Postives = 106/207 (51.21%), Query Frame = 0


Query: 3    SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
            S++G  Y A ++F  M   GC P+ A YNI+++ +G+AG  + A ++F+ M + G+ P +
Sbjct: 902  SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961

Query: 63   KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
            K++ +L+      G   +      ++ +SGL PD    N ++N  G+  +  +   L + 
Sbjct: 962  KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021

Query: 123  MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
            M+       D+ TYN LI   G AG +E   +++  +    LEP+V T+ + I  YS   
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081

Query: 183  LYKRCLEIFEQMIDAGCYPDGGTAKVL 210
              +    +++ M+  G  P+ GT + L
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108

[Close]

BLAST of Moc03g24120 vs. ExPASy TrEMBL
Match: A0A6J1CM30 (pentatricopeptide repeat-containing protein At2g35130 OS=Momordica charantia OX=3673 GN=LOC111012707 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.3e-131
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM
Sbjct: 341 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST
Sbjct: 401 KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV
Sbjct: 521 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 577

[Close]

BLAST of Moc03g24120 vs. ExPASy TrEMBL
Match: A0A1S3CAG0 (pentatricopeptide repeat-containing protein At2g35130 OS=Cucumis melo OX=3656 GN=LOC103498259 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.1e-123
Identity = 222/237 (93.67%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ+VFEEMKRIGITPTM
Sbjct: 341 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+S AGNAAKCEDIIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKME L ST
Sbjct: 401 KSHMLLLSAYSKAGNAAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           MQKG   RADISTYNILINVYGRAGF+ERMEELF LLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MQKGPC-RADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLE+FE+MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNV+RTMHKDVKT+LPV
Sbjct: 521 LYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPV 576

[Close]

BLAST of Moc03g24120 vs. ExPASy TrEMBL
Match: A0A0A0M168 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701920 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.5e-122
Identity = 220/237 (92.83%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ+VFEEMKRIGITPTM
Sbjct: 341 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+S+AGN AKCEDIIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKME L ST
Sbjct: 401 KSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           MQKG   RADISTYNILINVYGRAGF+ERMEELF LLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MQKGPC-RADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLE+FE+MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNV+RTMHKD+KT+LPV
Sbjct: 521 LYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDLKTLLPV 576

[Close]

BLAST of Moc03g24120 vs. ExPASy TrEMBL
Match: A0A6J1KIY3 (pentatricopeptide repeat-containing protein At2g35130 OS=Cucurbita maxima OX=3661 GN=LOC111495654 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.8e-121
Identity = 220/237 (92.83%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAG+PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEM+RIG+TPTM
Sbjct: 341 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMRRIGMTPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KS MLLLSA+SNAGNAAKCEDIIGQMHKSGLKPDTFV+NSMLNLYGRLGQF KME LLST
Sbjct: 401 KSFMLLLSAYSNAGNAAKCEDIIGQMHKSGLKPDTFVVNSMLNLYGRLGQFEKMEDLLST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           MQKG  +RADISTYNILINVYGRAGFLERMEELF LLPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MQKG-PYRADISTYNILINVYGRAGFLERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLEIFE+MIDAGCYPDGGTAKVLLSACSS EQIEQVTNV+RT+HKDVKT+LPV
Sbjct: 521 LYKRCLEIFEEMIDAGCYPDGGTAKVLLSACSSVEQIEQVTNVVRTIHKDVKTLLPV 576

[Close]

BLAST of Moc03g24120 vs. ExPASy TrEMBL
Match: A0A6J1EGX6 (pentatricopeptide repeat-containing protein At2g35130 OS=Cucurbita moschata OX=3662 GN=LOC111433996 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.2e-121
Identity = 219/237 (92.41%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAG+PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEM+RIGITPTM
Sbjct: 341 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMRRIGITPTM 400

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KS MLLLSA+SNAGN AKCEDIIGQMHKSGLKPDTFV+NSMLNLYGRLGQF KME LLST
Sbjct: 401 KSFMLLLSAYSNAGNTAKCEDIIGQMHKSGLKPDTFVVNSMLNLYGRLGQFEKMEDLLST 460

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           MQKG  +RADISTYNILINVYGRAGFLERMEELF +LPAKNLEPDVVTWTSRIGAYSRKK
Sbjct: 461 MQKG-PYRADISTYNILINVYGRAGFLERMEELFQMLPAKNLEPDVVTWTSRIGAYSRKK 520

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 240
           LYKRCLEIFE+MIDAGCYPDGGTAKVLLSACSS EQIEQVTNV+RT+HKDVKT+LPV
Sbjct: 521 LYKRCLEIFEEMIDAGCYPDGGTAKVLLSACSSVEQIEQVTNVVRTIHKDVKTLLPV 576

[Close]

BLAST of Moc03g24120 vs. TAIR 10
Match: AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 374.4 bits (960), Expect = 6.8e-104
Identity = 180/231 (77.92%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAG+PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH DA++VFEEMKR+GI PTM
Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+S A +  KCE I+ +M ++G++PDTFVLNSMLNLYGRLGQF KME +L+ 
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           M+ G    ADISTYNILIN+YG+AGFLER+EELF+ L  KN  PDVVTWTSRIGAYSRKK
Sbjct: 465 MENGPC-TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 524

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDV 234
           LY +CLE+FE+MID+GC PDGGTAKVLLSACSSEEQ+EQVT+V+RTMHK V
Sbjct: 525 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 574

[Close]

BLAST of Moc03g24120 vs. TAIR 10
Match: AT2G35130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 374.4 bits (960), Expect = 6.8e-104
Identity = 180/231 (77.92%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 3   SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTM 62
           SRAG+PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH DA++VFEEMKR+GI PTM
Sbjct: 367 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 426

Query: 63  KSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLST 122
           KSHMLLLSA+S A +  KCE I+ +M ++G++PDTFVLNSMLNLYGRLGQF KME +L+ 
Sbjct: 427 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486

Query: 123 MQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKK 182
           M+ G    ADISTYNILIN+YG+AGFLER+EELF+ L  KN  PDVVTWTSRIGAYSRKK
Sbjct: 487 MENGPC-TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 546

Query: 183 LYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKDV 234
           LY +CLE+FE+MID+GC PDGGTAKVLLSACSSEEQ+EQVT+V+RTMHK V
Sbjct: 547 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 596

[Close]

BLAST of Moc03g24120 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 110.5 bits (275), Expect = 1.8e-24
Identity = 59/228 (25.88%), Postives = 111/228 (48.68%), Query Frame = 0


Query: 3   SRAGFPY-GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPT 62
           +R G  + G   +F+ M+H G +PD  +YN ++ A    GL ++A+ VF  M   GI P 
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281

Query: 63  MKSHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLS 122
           + ++  L+          K  D++G+M   G  PD    N +L  Y + G   +   +  
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341

Query: 123 TMQKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRK 182
            MQ  +    + +TY++L+N++G++G  + + +LFL + + N +PD  T+   I  +   
Sbjct: 342 QMQ-AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 401

Query: 183 KLYKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTM 230
             +K  + +F  M++    PD  T + ++ AC      E    +++ M
Sbjct: 402 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448

[Close]

BLAST of Moc03g24120 vs. TAIR 10
Match: AT1G74750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 7.0e-24
Identity = 58/226 (25.66%), Postives = 111/226 (49.12%), Query Frame = 0


Query: 4   RAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTMK 63
           RA +   A  +F+ MQ  GCEPDR +Y  ++D + +AG  + A  +++ M+  G++P   
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTF 465

Query: 64  SHMLLLSAHSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLSTM 123
           ++ ++++    AG+      +  +M   G  P+    N M+ L+ +   +     L   M
Sbjct: 466 TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525

Query: 124 QKGSSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKKL 183
           Q  + F+ D  TY+I++ V G  GFLE  E +F  +  KN  PD   +   +  + +   
Sbjct: 526 Q-NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 585

Query: 184 YKRCLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTM 230
             +  + ++ M+ AG  P+  T   LLS      ++ +  N++++M
Sbjct: 586 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630

[Close]

BLAST of Moc03g24120 vs. TAIR 10
Match: AT3G59040.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 7.0e-24
Identity = 60/226 (26.55%), Postives = 114/226 (50.44%), Query Frame = 0


Query: 10  GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTMKSHMLLL 69
           GA  + S++  MG  P+  SY  ++++YGR G   +A+++F  M+  G  P+  ++ ++L
Sbjct: 164 GAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIIL 223

Query: 70  SAHSNAGNAAKCEDIIGQM---HKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLSTMQKG 129
                     + E++   +    KS LKPD  + + M+ +Y + G + K   + S+M  G
Sbjct: 224 KTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM-VG 283

Query: 130 SSFRADISTYNILINVYGRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 189
                   TYN L++        + + +++  +   +++PDVV++   I AY R +  + 
Sbjct: 284 KGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 343

Query: 190 CLEIFEQMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVIRTMHKD 233
            L +FE+M+DAG  P      +LL A +    +EQ   V ++M +D
Sbjct: 344 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385

The following BLAST results are available for this feature:

BLAST of Moc03g24120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142649.1	2.8e-131	100.00	pentatricopeptide repeat-containing protein At2g35130 [Momordica charantia]	[more]
XP_038895421.1	2.1e-123	93.67	pentatricopeptide repeat-containing protein At2g35130 isoform X1 [Benincasa hisp...	[more]
XP_038895422.1	2.1e-123	93.67	pentatricopeptide repeat-containing protein At2g35130 isoform X2 [Benincasa hisp...	[more]
XP_008459028.1	1.0e-122	93.67	PREDICTED: pentatricopeptide repeat-containing protein At2g35130 [Cucumis melo]	[more]
XP_004145440.1	5.2e-122	92.83	pentatricopeptide repeat-containing protein At2g35130 [Cucumis sativus] >KGN6686...	[more]

BLAST of Moc03g24120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82178	9.6e-103	77.92	Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX...	[more]
Q9S7Q2	2.6e-23	25.88	Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop...	[more]
Q9SSF9	9.8e-23	25.66	Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana OX...	[more]
Q9LYT2	9.8e-23	26.55	Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana OX...	[more]
Q9SZ52	2.2e-22	28.02	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]

BLAST of Moc03g24120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CM30	1.3e-131	100.00	pentatricopeptide repeat-containing protein At2g35130 OS=Momordica charantia OX=...	[more]
A0A1S3CAG0	5.1e-123	93.67	pentatricopeptide repeat-containing protein At2g35130 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0M168	2.5e-122	92.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701920 PE=4 SV=1	[more]
A0A6J1KIY3	2.8e-121	92.83	pentatricopeptide repeat-containing protein At2g35130 OS=Cucurbita maxima OX=366...	[more]
A0A6J1EGX6	6.2e-121	92.41	pentatricopeptide repeat-containing protein At2g35130 OS=Cucurbita moschata OX=3...	[more]

BLAST of Moc03g24120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35130.1	6.8e-104	77.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G35130.2	6.8e-104	77.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74850.1	1.8e-24	25.88	plastid transcriptionally active 2	[more]
AT1G74750.1	7.0e-24	25.66	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G59040.2	7.0e-24	26.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 166..214 e-value: 1.7E-8 score: 34.5 coord: 95..143 e-value: 2.3E-7 score: 30.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 29..61 e-value: 3.0E-7 score: 28.2 coord: 99..125 e-value: 0.0016 score: 16.5 coord: 135..168 e-value: 5.8E-7 score: 27.3 coord: 67..97 e-value: 1.5E-4 score: 19.7 coord: 169..202 e-value: 2.3E-7 score: 28.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 29..58 e-value: 1.3E-9 score: 37.7 coord: 67..93 e-value: 0.37 score: 11.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 167..201 score: 11.268274
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 132..166 score: 11.049048
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 26..60 score: 13.603031
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 127..239 e-value: 8.1E-25 score: 89.8 coord: 3..126 e-value: 1.7E-30 score: 108.5
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 3..237
None	No IPR available	PANTHER	PTHR47942:SF47	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 3..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g24120.1	Moc03g24120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010239	chloroplast mRNA processing
biological_process	GO:0015074	DNA integration
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding