Moc03g23590 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc03g23590
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptioncysteine proteinase inhibitor 1-like
Locationchr3: 16706451 .. 16706762 (+)
RNA-Seq ExpressionMoc03g23590
SyntenyMoc03g23590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGGCTACGAGCCAATAGAGAACCTACCAGGTTACTTCCAGATCCTAGGGGAGTACGCAACCAAAGAATTCAATAATCAAAATGGGAGGAGTGTTGAGTTCCACAGAACAATGAGTGCAGCAAAATTTATTCACTTCGGGACCAGCTATGACCTCCAGATTATGGCCGTTGATGGGACAGGTTGGCGCACCTTTAGAGCCATCGTCTACAAACCGCAGATTGGCGGCCACAAAGTCAAGTACATCCTCAACGACTTCATTGCCATCTCCAGGACTGAAGATTATTCCTCTGAAGAAGCCTCATCTTAG

mRNA sequence

ATGTGTGGCTACGAGCCAATAGAGAACCTACCAGGTTACTTCCAGATCCTAGGGGAGTACGCAACCAAAGAATTCAATAATCAAAATGGGAGGAGTGTTGAGTTCCACAGAACAATGAGTGCAGCAAAATTTATTCACTTCGGGACCAGCTATGACCTCCAGATTATGGCCGTTGATGGGACAGGTTGGCGCACCTTTAGAGCCATCGTCTACAAACCGCAGATTGGCGGCCACAAAGTCAAGTACATCCTCAACGACTTCATTGCCATCTCCAGGACTGAAGATTATTCCTCTGAAGAAGCCTCATCTTAG

Coding sequence (CDS)

ATGTGTGGCTACGAGCCAATAGAGAACCTACCAGGTTACTTCCAGATCCTAGGGGAGTACGCAACCAAAGAATTCAATAATCAAAATGGGAGGAGTGTTGAGTTCCACAGAACAATGAGTGCAGCAAAATTTATTCACTTCGGGACCAGCTATGACCTCCAGATTATGGCCGTTGATGGGACAGGTTGGCGCACCTTTAGAGCCATCGTCTACAAACCGCAGATTGGCGGCCACAAAGTCAAGTACATCCTCAACGACTTCATTGCCATCTCCAGGACTGAAGATTATTCCTCTGAAGAAGCCTCATCTTAG

Protein sequence

MCGYEPIENLPGYFQILGEYATKEFNNQNGRSVEFHRTMSAAKFIHFGTSYDLQIMAVDGTGWRTFRAIVYKPQIGGHKVKYILNDFIAISRTEDYSSEEASS
Homology
BLAST of Moc03g23590 vs. NCBI nr
Match: XP_022142674.1 (cysteine proteinase inhibitor 1-like [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-05
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0

Query: 3   GYEPIENL-PGYFQILGEYATKEFNNQNGRSVEFHRTMSAAKFIHFGTSYDLQIMAVDGT 62
           GYE I+N+   Y Q LG++A +E N +    ++F +  S    I  GT+Y LQ+ A+DGT
Sbjct: 30  GYEAIKNVNDPYIQSLGKFAVEEHNRKAKDDLKFEKVKSGLVQIVDGTNYSLQVQAIDGT 89

Query: 63  GWRTFRAIVYKPQIGGHKVKYILNDFIAIS 92
             R + A VYK   G  K    LN F A++
Sbjct: 90  VSRLYSAAVYKDLKGNLK----LNQFFAMT 115

BLAST of Moc03g23590 vs. ExPASy TrEMBL
Match: A0A6J1CM53 (cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111012731 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0

Query: 3   GYEPIENL-PGYFQILGEYATKEFNNQNGRSVEFHRTMSAAKFIHFGTSYDLQIMAVDGT 62
           GYE I+N+   Y Q LG++A +E N +    ++F +  S    I  GT+Y LQ+ A+DGT
Sbjct: 30  GYEAIKNVNDPYIQSLGKFAVEEHNRKAKDDLKFEKVKSGLVQIVDGTNYSLQVQAIDGT 89

Query: 63  GWRTFRAIVYKPQIGGHKVKYILNDFIAIS 92
             R + A VYK   G  K    LN F A++
Sbjct: 90  VSRLYSAAVYKDLKGNLK----LNQFFAMT 115

BLAST of Moc03g23590 vs. ExPASy TrEMBL
Match: A0A0A0LYM0 (Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G183070 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-04
Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 0

Query: 3   GYEPIENLPG-YFQILGEYATKEFNNQNGRSVEFHRTMSAAKFIHFGTSYDLQIMAVDGT 62
           GY+PI+++   Y Q LGE+A  E N Q    ++F + +     I  GT+YDL++ A++GT
Sbjct: 33  GYKPIKDIADPYIQSLGEFAVNEHNKQAKTELKFQKVIGGKLQIVAGTNYDLRLTALEGT 92

Query: 63  GWRTFRAIVY 72
             RT+  +V+
Sbjct: 93  VSRTYGTLVF 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022142674.12.2e-0538.89cysteine proteinase inhibitor 1-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CM531.1e-0538.89cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A0A0LYM06.0e-0437.14Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G183070 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 2..95
e-value: 1.2E-8
score: 36.8
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 4..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc03g23590.1Moc03g23590.1mRNA