Moc03g23540 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g23540
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	heterogeneous nuclear ribonucleoprotein 1
Location	chr3: 16662562 .. 16665650 (+)
RNA-Seq Expression	Moc03g23540
Synteny	Moc03g23540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTGGCAAGCTTTTTATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTAGGGAGTATTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTCGGTTTCGTCGTCTTTGCTGATCCTGTCATTGCAGCGAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTGTAAGTTTTGTGTGTTCTTCTTGGTTCTCATTGATTTTTTACCTGTATTGGAACCTTTAGATGGTCTCTCATGACTTGTTGAAGATGTGTTCTGATTTGATTTTGTGTATAAATATGCTTCATAGAGGGATCAAGATTTTCCAGATTATCCTGTGGTCCATCTTGATTCAAAATTTTTAGGATTCTTCAGCATTTGTATTTTGAAGCTGTTTTGTTTTGGAAAACTTGCAATTTTCCTTCAGAACATAGATGGAAGATTTGGTTGTTCGCATTTTATTAGGACAAATTCTGTTTCATGTTTTTCTTGAAGCACAATGGCAATGCTGTTGCTCGGAATATCGATCGTTCTTGAGAATCAAATGCTTTATACATGTTCTAGAAAATGTGATTAGCATCTTGGCGGTAAAACATTTATTTGTATAAGAAAAGGTTTAAGACTACTTCTGGAATTAGTTTGAGAATAAGCAATTATGAGAAATCTGTTTGCATCATTTAAGGGGGAAAAAGATCATTTAAGAATTTGCTCCTGAGCTTCATTAGGAAGTTTGAATCTTTTAAGATAGAGGTTGAGAGATCCTAAAGCTACCCTAATTGTTAATTGAAGTGAGTGGTTGGCTTCATTTTCATAGTTGGAGGCAAATTTTTTTTTTTTTTGGTTGTATTGATTGTCTGCAAGCAATTATGATGTTGTCTTACAGTTACACCTACATCTTTTGAGCTGTGTCCTATATGTACAAACATTTATAAATCTAATCATTACCATGAGAGGAGCCTTGTAAGGAATATGCGGACTTTCAAATAGAAAGAAGTCTGTCATAATTTTCCTTACTAGTTCTCGATGTGAAACCGGGATATGCGAAAATTAGAAGACTTGATGTCTTAGAGAGTTCGTGGATGCACAAAAATTAGGTGATATTTTTGTGATGATCATAACTTGTATTAGAATGATATGTTTCGTTGCTTCTAGACTTCCATTTGTGTTGGTTACCATGTTCATGTTTGGTTATCCTTTTTTGTTTAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGACGATCAAAACATTTTGAGCCGAAACAATACTGGTATCCTCGGATCACCCGGCCCTACTCGCACAAAGAAGATATTTGTAGGAGGTTTGGCATCCACCGTCACGGAGAGTGACTTTAAGAAGTACTTCGATCAGTTTGGAACAATCACAGATGTCGTGGTGATGTATGACCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTGTACAAAACTTTCCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGAGCTGTTCCAAAGGAATCATCACCAGTGCCCAACCGAAATCAATTAGGCGGTTACCCTTATGGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATACAATCCAGCCTCAGTTGGAGGATATGGACTGAGATCTGATGGTAGATTTAGTCCCATTTCAGTTGGTCGTGGTGGGCTTTCTCCAATAAGTCCTGGTTATGGAATAGGACTAAATCTTGACACAGGGTTGAGCCCAAACTACGGGGCAGGTCCGAATGGTAACTCTAATCTCAGCTATGGACGAGTAATGAGCCCCTCGTATGGTGTAAATTTAAATAGGTATGGTAGCCCAAACCCGATGCTATATGGTGGAGGCAGTGGAGGGAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGGAACGTCGGTAACTCTGCTGGTGCAAACTCCTCACACTTGAGGACTTTTCCCGGCTCTGGTGGTGTGCATACAGGAACTAATTCCTTGAACAGTATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTCGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGATTTCGGAAACGGAGATGCCAGCTTTACATCAGGCACAACAGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACTCATTCTATGGCCATTCCAGTTGGCAGTCATTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGCTTTGGCCTCGGCAATGCAGCTTCAGATGTTATTAGTAGAAACTCTGCTGGTTATACTGTTGGATATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTTCTTCTACTCTCGAGAAAACTTTGTATATTTTTGCATATTTTCGACTGTCTTACTTTACACATCTCTCGAAGCTTTAGATCTTCAAGCTTGTAACACTAAAGGCCTCACAAAAACTTATGCCAAGTTTGGATTGTTAAACTGCATAAAAGCTGCCTGCCCTTTTCATTTTTTAGTAGTTTTACCTGAAATTTTTTACAATCTTGTAAGGAGTTAAAATATGTTTAAAACCACTATATGATGTTCTCATGCACCTTCCAAAGTTGAGAGAGCCTACTTAGAGCTATTCTGAAAAACATTTCTTATTTTCCATTAGTTTCTTCTTATGGGTGATCTGTTTTTATGGACCTGTAAACAATGATTTCTACCCCATGTTAGTTTTAAATTGTCCCACCTATTTGATCACATTGTTAGGGAAACAAAAGCATAGAAACCACTCGAAAACAGTCCCTAATCTTTTCAATGCGAGCTATGGATGCTGACTAGTTTAATCAAACATGAAATAATCAAAATTTATGAACTTCAAAAGGATGTCATTACTTTTATAATCTCACTTAAAGAAACATAGCTTTTAAGACTAGGAAAATGGGCTGATCTTCTTGTTTTGTGGTTAAATGTTTGATTCAGGAATTGCTGCCTAG

mRNA sequence

ATGGATCCTGGCAAGCTTTTTATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTAGGGAGTATTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTCGGTTTCGTCGTCTTTGCTGATCCTGTCATTGCAGCGAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTGTTGAAGCAAAGAAGGCTGTTCCTCGAGACGATCAAAACATTTTGAGCCGAAACAATACTGGTATCCTCGGATCACCCGGCCCTACTCGCACAAAGAAGATATTTGTAGGAGGTTTGGCATCCACCGTCACGGAGAGTGACTTTAAGAAGTACTTCGATCAGTTTGGAACAATCACAGATGTCGTGGTGATGTATGACCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTGTACAAAACTTTCCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGAGCTGTTCCAAAGGAATCATCACCAGTGCCCAACCGAAATCAATTAGGCGGTTACCCTTATGGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATACAATCCAGCCTCAGTTGGAGGATATGGACTGAGATCTGATGGTAGATTTAGTCCCATTTCAGTTGGTCGTGGTGGGCTTTCTCCAATAAGTCCTGGTTATGGAATAGGACTAAATCTTGACACAGGGTTGAGCCCAAACTACGGGGCAGGTCCGAATGGTAACTCTAATCTCAGCTATGGACGAGTAATGAGCCCCTCGTATGGTGTAAATTTAAATAGGTATGGTAGCCCAAACCCGATGCTATATGGTGGAGGCAGTGGAGGGAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGGAACGTCGGTAACTCTGCTGGTGCAAACTCCTCACACTTGAGGACTTTTCCCGGCTCTGGTGGTGTGCATACAGGAACTAATTCCTTGAACAGTATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTCGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGATTTCGGAAACGGAGATGCCAGCTTTACATCAGGCACAACAGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACTCATTCTATGGCCATTCCAGTTGGCAGTCATTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGCTTTGGCCTCGGCAATGCAGCTTCAGATGTTATTAGTAGAAACTCTGCTGGTTATACTGTTGGATATGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCCTAG

Coding sequence (CDS)

ATGGATCCTGGCAAGCTTTTTATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTAGGGAGTATTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTCGGTTTCGTCGTCTTTGCTGATCCTGTCATTGCAGCGAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTGTTGAAGCAAAGAAGGCTGTTCCTCGAGACGATCAAAACATTTTGAGCCGAAACAATACTGGTATCCTCGGATCACCCGGCCCTACTCGCACAAAGAAGATATTTGTAGGAGGTTTGGCATCCACCGTCACGGAGAGTGACTTTAAGAAGTACTTCGATCAGTTTGGAACAATCACAGATGTCGTGGTGATGTATGACCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTGTACAAAACTTTCCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGAGCTGTTCCAAAGGAATCATCACCAGTGCCCAACCGAAATCAATTAGGCGGTTACCCTTATGGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATACAATCCAGCCTCAGTTGGAGGATATGGACTGAGATCTGATGGTAGATTTAGTCCCATTTCAGTTGGTCGTGGTGGGCTTTCTCCAATAAGTCCTGGTTATGGAATAGGACTAAATCTTGACACAGGGTTGAGCCCAAACTACGGGGCAGGTCCGAATGGTAACTCTAATCTCAGCTATGGACGAGTAATGAGCCCCTCGTATGGTGTAAATTTAAATAGGTATGGTAGCCCAAACCCGATGCTATATGGTGGAGGCAGTGGAGGGAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGGAACGTCGGTAACTCTGCTGGTGCAAACTCCTCACACTTGAGGACTTTTCCCGGCTCTGGTGGTGTGCATACAGGAACTAATTCCTTGAACAGTATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTCGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGATTTCGGAAACGGAGATGCCAGCTTTACATCAGGCACAACAGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACTCATTCTATGGCCATTCCAGTTGGCAGTCATTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGCTTTGGCCTCGGCAATGCAGCTTCAGATGTTATTAGTAGAAACTCTGCTGGTTATACTGTTGGATATGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCCTAG

Protein sequence

MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAARVVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGSGGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA

Homology

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BLAST of Moc03g23540 vs. NCBI nr
Match: XP_022142553.1 (heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia] >XP_022142555.1 heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia])

HSP 1 Score: 943.7 bits (2438), Expect = 6.0e-271
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL
Sbjct: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS
Sbjct: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 478

[Close]

BLAST of Moc03g23540 vs. NCBI nr
Match: XP_038894700.1 (heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida] >XP_038894701.1 heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida])

HSP 1 Score: 916.0 bits (2366), Expect = 1.4e-262
Identity = 461/478 (96.44%), Postives = 469/478 (98.12%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPV+AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQLGGYPY FGRVGSYLNGYNQGYNP SVGGYGLRSDGRFSP++VGRGGL
Sbjct: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYGIGLNLDTGL+PNYG GPN  SNLSYGRVMSPSYG NLNRYGSPNPM+YGGGS
Sbjct: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGS 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVGNSAG N SHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478

[Close]

BLAST of Moc03g23540 vs. NCBI nr
Match: XP_008463611.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo])

HSP 1 Score: 898.3 bits (2320), Expect = 2.9e-257
Identity = 452/478 (94.56%), Postives = 464/478 (97.07%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQL GYPY FGRVGSYLNGYNQGYNP SVGGYGLRSDGRFSP++VGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYG+G+NLDTGL+PNYG GP  +SNLSYGRVMSPSYG NLNRYGSPNPM+YGGG 
Sbjct: 241 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNV NSAG NSSHLRTFPGSGGVHTGTNSLN+IGGLWG SASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 360

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 476

[Close]

BLAST of Moc03g23540 vs. NCBI nr
Match: KAA0035665.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK30878.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 898.3 bits (2320), Expect = 2.9e-257
Identity = 452/478 (94.56%), Postives = 464/478 (97.07%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 38  MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 97

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 98  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 157

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 158 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 217

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQL GYPY FGRVGSYLNGYNQGYNP SVGGYGLRSDGRFSP++VGRGGL
Sbjct: 218 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 277

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYG+G+NLDTGL+PNYG GP  +SNLSYGRVMSPSYG NLNRYGSPNPM+YGGG 
Sbjct: 278 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 337

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNV NSAG NSSHLRTFPGSGGVHTGTNSLN+IGGLWG SASLGH
Sbjct: 338 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 397

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 398 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 457

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRGIAA
Sbjct: 458 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 513

[Close]

BLAST of Moc03g23540 vs. NCBI nr
Match: XP_031745329.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucumis sativus] >KGN65038.1 hypothetical protein Csa_013020 [Cucumis sativus])

HSP 1 Score: 883.2 bits (2281), Expect = 9.7e-253
Identity = 446/478 (93.31%), Postives = 461/478 (96.44%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQL GYP+ FGRVGSYLNGYNQGYNP +VGGYGLRSDGRFSP++VGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYG+GLNL+TGL+PNYG GPN +SNLSYGRVMSPSY  NLNRYGSPNPM+Y GG 
Sbjct: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNV  SAG NSSHLRTFPGSGGVHTGT+SLN+IGGLWGASASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGS FNT NLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 477

[Close]

BLAST of Moc03g23540 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.7e-61
Identity = 169/447 (37.81%), Postives = 237/447 (53.02%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAARV 61
           D GKLF+GGISW+TDED+LRE+F ++GEV + ++MRD+ TGR RGFGFV+F+DP +  RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q +  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F++YF+ +G +TDV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRF-SPISVG 241
           RA+PK+++P      +GG     G  G Y     QGY        G     RF    SVG
Sbjct: 184 RALPKDANPGGGGRSMGG-----GGSGGY-----QGYGGNESSYDGRMDSNRFLQHQSVG 243

Query: 242 RGGLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLY 301
            G  S  S GYG G          YG G NG    +YG      Y  +   YG+     Y
Sbjct: 244 NGLPSYGSSGYGAG----------YGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGY 303

Query: 302 GGGS---GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWG 361
           G  +    G GS    + +N W    +S   N  +     GSG  H+G        G+ G
Sbjct: 304 GATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY-----GSGAAHSGY-------GVPG 363

Query: 362 ASASLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEV 421
           A+          SP   +N  +G G     SG+  GY         + + Y         
Sbjct: 364 AAPP------TQSPSGYSNQGYGYGG---YSGSDSGY--------GNQAAYGVVGGRPSG 396

Query: 422 HGNNDEGN-----SFYGHSSWQSLPTE 436
            G+N+ G+       YG  SW+S P++
Sbjct: 424 GGSNNPGSGGYMGGGYGDGSWRSDPSQ 396

[Close]

BLAST of Moc03g23540 vs. ExPASy Swiss-Prot
Match: Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.5e-49
Identity = 126/315 (40.00%), Postives = 172/315 (54.60%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM------------VTRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLGGYPY-------GFGRVG--SYLNGYNQGYNPASVGGYGLRSDG-- 241
           PKE   P   R +  G PY       G G +G  +++  Y +GY P     YG +  G  
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPGFP 258

Query: 242 --RFSP-----ISVGRG-GLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPS 296
              + P     ++  RG G +P  PG   G N    ++  YG     +   +Y    SP 
Sbjct: 259 AAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGPVADLYGPASQDSGVGNYISAASPQ 318

[Close]

BLAST of Moc03g23540 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.6e-48
Identity = 137/351 (39.03%), Postives = 183/351 (52.14%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM------------VTRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLGGYPY-------GFGRVG--SYLNGYNQGYNPASVGGYGLRSDGRF 241
           PKE   P   R +  G PY       G G +G  +++  Y +GY P     YG +  G F
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPG-F 258

Query: 242 SPISVGRGGLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGS 301
              + G    + ++   G  LN       +Y A PN      +G   SP+          
Sbjct: 259 PAAAYGPVAAAAVAAARGSVLN-------SYSAQPN------FGAPASPA---------G 318

Query: 302 PNPMLYGGGSGGNGSILSSSVQNLWGNVGNSAGANS--SHLRTFPGSGGVH 340
            NP   GG  G N       V +L+G     +G  +  S     PGSG  H
Sbjct: 319 SNPARPGGFPGANS---PGPVADLYGPASQDSGVGNYISAASPQPGSGFGH 330

[Close]

BLAST of Moc03g23540 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-45
Identity = 116/302 (38.41%), Postives = 163/302 (53.97%), Query Frame = 0


Query: 4   GKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+TT ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTK--KIFVGGLASTVTESDF 123
            + H +DGR ++ K   PR  Q   +R   G    P    +K  KIFVGG+     E++ 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 129

Query: 124 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 183
           ++YF +FG +T+VV++YD   QRPRGFGFIT+E E+SV++ +   FH++ GK VEVKRA 
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189

Query: 184 PKES-SPVPNRNQLGGYPYGFGRVGSYLNG--------YNQGYNPASVGGYGLRSDGRFS 243
           P++S S  P   Q G   +G   V +  NG        + QGY P  +     ++ G + 
Sbjct: 190 PRDSKSQAP--GQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 249

Query: 244 PISVGRGGLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSP 294
           P   GRG   P  P     ++   G  P     P G     YG     S+G     YG P
Sbjct: 250 PPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQG-----YGAPPQFSFG-----YGPP 299

[Close]

BLAST of Moc03g23540 vs. ExPASy Swiss-Prot
Match: Q9JII5 (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 6.3e-45
Identity = 115/305 (37.70%), Postives = 164/305 (53.77%), Query Frame = 0


Query: 4   GKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+TT ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTVEAKKAVPRDDQNILSRNNTGILGSP--GPTRTKKIFVGGLASTVTESDF 123
            + H +DGR ++ K   PR  Q   +R   G    P    +++ KIFVGG+     E++ 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 129

Query: 124 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 183
           ++YF +FG +T+VV++YD   QRPRGFGFIT+E E+SV++ +   FH++ GK VEVKRA 
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189

Query: 184 PKESSPVPNRNQLGGYP----YGFGRVGSYLNG--------YNQGYNPASVGGYGLRSDG 243
           P++S     +NQ  G P    +G     S  NG        + QGY P  +     ++ G
Sbjct: 190 PRDS-----KNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIG 249

Query: 244 RFSPISVGRGGLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRY 294
            + P   GRG   P  P     ++   G  P     P G     YG     S+G     Y
Sbjct: 250 GYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQG-----YGAPPQFSFG-----Y 299

[Close]

BLAST of Moc03g23540 vs. ExPASy TrEMBL
Match: A0A6J1CL94 (heterogeneous nuclear ribonucleoprotein 1 OS=Momordica charantia OX=3673 GN=LOC111012638 PE=4 SV=1)

HSP 1 Score: 943.7 bits (2438), Expect = 2.9e-271
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL
Sbjct: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS
Sbjct: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 478

[Close]

BLAST of Moc03g23540 vs. ExPASy TrEMBL
Match: A0A5D3E516 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00810 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.4e-257
Identity = 452/478 (94.56%), Postives = 464/478 (97.07%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 38  MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 97

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 98  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 157

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 158 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 217

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQL GYPY FGRVGSYLNGYNQGYNP SVGGYGLRSDGRFSP++VGRGGL
Sbjct: 218 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 277

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYG+G+NLDTGL+PNYG GP  +SNLSYGRVMSPSYG NLNRYGSPNPM+YGGG 
Sbjct: 278 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 337

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNV NSAG NSSHLRTFPGSGGVHTGTNSLN+IGGLWG SASLGH
Sbjct: 338 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 397

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 398 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 457

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRGIAA
Sbjct: 458 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 513

[Close]

BLAST of Moc03g23540 vs. ExPASy TrEMBL
Match: A0A1S3CK54 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103501720 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.4e-257
Identity = 452/478 (94.56%), Postives = 464/478 (97.07%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQL GYPY FGRVGSYLNGYNQGYNP SVGGYGLRSDGRFSP++VGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYG+G+NLDTGL+PNYG GP  +SNLSYGRVMSPSYG NLNRYGSPNPM+YGGG 
Sbjct: 241 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNV NSAG NSSHLRTFPGSGGVHTGTNSLN+IGGLWG SASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 360

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 476

[Close]

BLAST of Moc03g23540 vs. ExPASy TrEMBL
Match: A0A0A0LTE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181500 PE=4 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 4.7e-253
Identity = 446/478 (93.31%), Postives = 461/478 (96.44%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNRNQL GYP+ FGRVGSYLNGYNQGYNP +VGGYGLRSDGRFSP++VGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYG+GLNL+TGL+PNYG GPN +SNLSYGRVMSPSY  NLNRYGSPNPM+Y GG 
Sbjct: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNV  SAG NSSHLRTFPGSGGVHTGT+SLN+IGGLWGASASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGS FNT NLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           N+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 477

[Close]

BLAST of Moc03g23540 vs. ExPASy TrEMBL
Match: A0A6J1EKS0 (heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434205 PE=4 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 8.0e-253
Identity = 443/478 (92.68%), Postives = 457/478 (95.61%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPV+AAR
Sbjct: 33  MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 92

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQN+LSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 93  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 152

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K YFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 153 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 212

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PKESSPVPNR+QLG YPYGFGRVGSYLNGYNQGYNP SVG YGLRSD RFSP++VGRGGL
Sbjct: 213 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 272

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SPISPGYGIGLNLDTGL+PNYG G N  SNLSYGRVMSPSYG NLNRYGSPNPM+YGGG+
Sbjct: 273 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 332

Query: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVGNS G NSSHLRTFPGSGGVHTGTNSLN IGGLWGASASL H
Sbjct: 333 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 392

Query: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GE++GSPFN  NLDF +GD S TSGTTVGYARS+GTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 393 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 452

Query: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRGIAA 479
           NSFYGHSSWQ LPTELEDSSS+GFGLGNAASDVISRN+ GYTVGYGVSNRQSNRGIAA
Sbjct: 453 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRGIAA 510

[Close]

BLAST of Moc03g23540 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 464.2 bits (1193), Expect = 1.3e-130
Identity = 282/498 (56.63%), Postives = 338/498 (67.87%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP +A  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR-NNTGILGSP-GPTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R N++ I GSP GP RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FK YF+QFGT TDVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRNQLG-GYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRG 241
           VPKE SP P+R+ LG GY YG  RV + LNGY QG+NPA+VGGYGLR DGRFSP+  GR 
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGG 301
           G +  S GYG+ +N D GL   +  G N N N+ YGR MSP Y  N NR+G P     GG
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG-PAVGYEGG 303

Query: 302 GSGGNGSILSSSVQNLWGNVGN-SAGANSSHLRTFPGSGGVHTGTNSLN----SIGGLWG 361
             GGN S  SS  +NLWGN G  +   N+++  +    GG  +G N+L+    + G  WG
Sbjct: 304 NGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVNWG 363

Query: 362 ASASLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTN----VSSASLYSAPNI 421
           A    G G NA S  N      GNG++ F  GT    AR+ G N     SS S  SA N 
Sbjct: 364 AP---GGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNN 423

Query: 422 --YD-----EVHGNNDEGNSFYGHSSWQSLPTELEDSSSIGFGLGNA--ASDVISRNSA- 478
             YD     E +GN     + Y   +W+S   E E  +   +G+G    +SDV +R+S+ 
Sbjct: 424 TGYDTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSP 483

[Close]

BLAST of Moc03g23540 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 460.7 bits (1184), Expect = 1.4e-129
Identity = 280/496 (56.45%), Postives = 336/496 (67.74%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP +A  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR-NNTGILGSP-GPTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R N++ I GSP GP RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FK YF+QFGT TDVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRNQLG-GYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRG 241
           VPKE SP P+R+ LG GY YG  RV + LNGY QG+NPA+VGGYGLR DGRFSP+  GR 
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGG 301
           G +  S GYG+ +N D GL   +  G N N N+ YGR MSP Y  N NR+G P     GG
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG-PAVGYEGG 303

Query: 302 GSGGNGSILSSSVQNLWGNVGN-SAGANSSHLRTFPGSGGVHTGTNSLN----SIGGLWG 361
             GGN S  SS  +NLWGN G  +   N+++  +    GG  +G N+L+    + G  WG
Sbjct: 304 NGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVNWG 363

Query: 362 ASASLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTN----VSSASLYSAPNI 421
           A    G G NA S  N      GNG++ F  GT    AR+ G N     SS S  SA N 
Sbjct: 364 AP---GGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNN 423

Query: 422 --YD-----EVHGNNDEGNSFYGHSSWQSLPTELEDSSSIGFGLGNA--ASDVISRNSA- 476
             YD     E +GN     + Y   +W+S   E E  +   +G+G    +SDV +R+S+ 
Sbjct: 424 TGYDTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSP 483

[Close]

BLAST of Moc03g23540 vs. TAIR 10
Match: AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 405.2 bits (1040), Expect = 7.2e-113
Identity = 247/483 (51.14%), Postives = 307/483 (63.56%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP +A R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVL KH+IDG+ VEAKKAVPRDD  + +++N+ + GSPGP+ +KKIFVGGLAS+VTE++F
Sbjct: 63  VVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEF 122

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYF QFG ITDVVVMYDH TQRPRGFGFI+Y+SEE+V+KVL KTFHELNGKMVEVK AV
Sbjct: 123 KKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAV 182

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PK+ +    RNQ+    +G  R+ S LN Y QG++P+ + GYG++ + R+SP    RGG 
Sbjct: 183 PKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGF 242

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SP   GYGI LN +   + NYG+G +G     +GR  SP Y  +L R+GS   M  GG S
Sbjct: 243 SPFGHGYGIELNFEPNQTQNYGSGSSG----GFGRPFSPGYAASLGRFGS--QMESGGAS 302

Query: 301 GGNGSILSSSVQN-LWGNVGNSAGANSSHLR-TFPGSGGVHTGTNSLNSIGGLWGASA-- 360
            GNGS+L+++ +N LWGN G    +NS   R +F G+ G+    +SL SIG  WG  A  
Sbjct: 303 VGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGM----SSLGSIGDNWGTVARA 362

Query: 361 -SLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHG 420
            S  HGE  G                      VG     G +V   S  S  +I      
Sbjct: 363 RSSYHGERGG----------------------VGLEAMRGVHVGGYS--SGSSIL----- 422

Query: 421 NNDEGNSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRG 479
              E +S Y  S W SLP + E+      GLG    D +SR  AGY       NRQ N G
Sbjct: 423 ---EADSLYSDSMWLSLPAKAEE------GLGMGPLDFMSRGPAGYI------NRQPNGG 431

[Close]

BLAST of Moc03g23540 vs. TAIR 10
Match: AT5G47620.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 405.2 bits (1040), Expect = 7.2e-113
Identity = 247/483 (51.14%), Postives = 307/483 (63.56%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP +A R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVL KH+IDG+ VEAKKAVPRDD  + +++N+ + GSPGP+ +KKIFVGGLAS+VTE++F
Sbjct: 63  VVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEF 122

Query: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYF QFG ITDVVVMYDH TQRPRGFGFI+Y+SEE+V+KVL KTFHELNGKMVEVK AV
Sbjct: 123 KKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAV 182

Query: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240
           PK+ +    RNQ+    +G  R+ S LN Y QG++P+ + GYG++ + R+SP    RGG 
Sbjct: 183 PKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGF 242

Query: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300
           SP   GYGI LN +   + NYG+G +G     +GR  SP Y  +L R+GS   M  GG S
Sbjct: 243 SPFGHGYGIELNFEPNQTQNYGSGSSG----GFGRPFSPGYAASLGRFGS--QMESGGAS 302

Query: 301 GGNGSILSSSVQN-LWGNVGNSAGANSSHLR-TFPGSGGVHTGTNSLNSIGGLWGASA-- 360
            GNGS+L+++ +N LWGN G    +NS   R +F G+ G+    +SL SIG  WG  A  
Sbjct: 303 VGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGM----SSLGSIGDNWGTVARA 362

Query: 361 -SLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHG 420
            S  HGE  G                      VG     G +V   S  S  +I      
Sbjct: 363 RSSYHGERGG----------------------VGLEAMRGVHVGGYS--SGSSIL----- 422

Query: 421 NNDEGNSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRG 479
              E +S Y  S W SLP + E+      GLG    D +SR  AGY       NRQ N G
Sbjct: 423 ---EADSLYSDSMWLSLPAKAEE------GLGMGPLDFMSRGPAGYI------NRQPNGG 431

[Close]

BLAST of Moc03g23540 vs. TAIR 10
Match: AT5G47620.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 392.9 bits (1008), Expect = 3.7e-109
Identity = 247/505 (48.91%), Postives = 307/505 (60.79%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP +A R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGR----------------------TVEAKKAVPRDDQNILSRNNTGILGSP 120
           VVL KH+IDG+                       VEAKKAVPRDD  + +++N+ + GSP
Sbjct: 63  VVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSP 122

Query: 121 GPTRTKKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESV 180
           GP+ +KKIFVGGLAS+VTE++FKKYF QFG ITDVVVMYDH TQRPRGFGFI+Y+SEE+V
Sbjct: 123 GPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAV 182

Query: 181 EKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPAS 240
           +KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    +G  R+ S LN Y QG++P+ 
Sbjct: 183 DKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSP 242

Query: 241 VGGYGLRSDGRFSPISVGRGGLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMS 300
           + GYG++ + R+SP    RGG SP   GYGI LN +   + NYG+G +G     +GR  S
Sbjct: 243 ISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSGSSG----GFGRPFS 302

Query: 301 PSYGVNLNRYGSPNPMLYGGGSGGNGSILSSSVQN-LWGNVGNSAGANSSHLR-TFPGSG 360
           P Y  +L R+GS   M  GG S GNGS+L+++ +N LWGN G    +NS   R +F G+ 
Sbjct: 303 PGYAASLGRFGS--QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNS 362

Query: 361 GVHTGTNSLNSIGGLWGASA---SLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARS 420
           G+    +SL SIG  WG  A   S  HGE  G                      VG    
Sbjct: 363 GM----SSLGSIGDNWGTVARARSSYHGERGG----------------------VGLEAM 422

Query: 421 IGTNVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQSLPTELEDSSSIGFGLGNAASDV 479
            G +V   S  S  +I         E +S Y  S W SLP + E+      GLG    D 
Sbjct: 423 RGVHVGGYS--SGSSIL--------EADSLYSDSMWLSLPAKAEE------GLGMGPLDF 453

The following BLAST results are available for this feature:

BLAST of Moc03g23540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142553.1	6.0e-271	100.00	heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia] >XP_022142555.1 ...	[more]
XP_038894700.1	1.4e-262	96.44	heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida] >XP_038894701.1 he...	[more]
XP_008463611.1	2.9e-257	94.56	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo]	[more]
KAA0035665.1	2.9e-257	94.56	heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK30878.1...	[more]
XP_031745329.1	9.7e-253	93.31	heterogeneous nuclear ribonucleoprotein 1-like [Cucumis sativus] >KGN65038.1 hyp...	[more]

BLAST of Moc03g23540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	3.7e-61	37.81	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q96DH6	5.5e-49	40.00	RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1	[more]
Q920Q6	4.6e-48	39.03	RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1	[more]
Q96EP5	4.8e-45	38.41	DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1	[more]
Q9JII5	6.3e-45	37.70	DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2	[more]

BLAST of Moc03g23540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CL94	2.9e-271	100.00	heterogeneous nuclear ribonucleoprotein 1 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A5D3E516	1.4e-257	94.56	Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CK54	1.4e-257	94.56	heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350172...	[more]
A0A0A0LTE8	4.7e-253	93.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181500 PE=4 SV=1	[more]
A0A6J1EKS0	8.0e-253	92.68	heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita moschata ...	[more]

BLAST of Moc03g23540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07810.1	1.3e-130	56.63	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	1.4e-129	56.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.1	7.2e-113	51.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.2	7.2e-113	51.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.4	3.7e-109	48.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 105..177 e-value: 2.0E-24 score: 97.2 coord: 5..76 e-value: 4.9E-22 score: 89.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 6..71 e-value: 2.4E-15 score: 56.1 coord: 106..164 e-value: 1.6E-16 score: 59.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 104..181 score: 18.001007
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..80 score: 17.745176
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..86 e-value: 3.5E-26 score: 93.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 101..190 e-value: 3.8E-27 score: 96.3
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 1..478
None	No IPR available	PANTHER	PTHR48032:SF1	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1-LIKE	coord: 1..478
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 6..76 e-value: 5.55862E-36 score: 125.776
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 102..181 e-value: 4.95642E-49 score: 160.609
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..99
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 100..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g23540.1	Moc03g23540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding