Moc03g22590 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g22590
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RNase H domain-containing protein
Location	chr3: 15962222 .. 15963801 (-)
RNA-Seq Expression	Moc03g22590
Synteny	Moc03g22590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTGAATAATTGGGCTGCTGCCTCTCTTTCCTTCGTAGGGCGAGCTACTCTAGTACAATCTATCATTCAAGCTATCCCAACTTATGCTATGCATATATTTCGGTTTCCAGGAAATGTCTGTAAGGAAATAGATAAACTGAGTAGAAGTTTTCTGTGGGGTCACACTAGGGAAAGATCTCAGATCCACCTAGTTAATTGGGATAGGATTACTAGACTTAAGAAGGAAGGGGGCCTTAGTTTACATAGAGTTCAAGATTTTAACATAGCTTTGATTGGTAAATTTGCGTGGGGTTTATTAAATCGGCCAAATGATTTGTGGGCCCAACTTCTCATGAATAAATACAAGGACCGATGGAAGGAGGACTGGAGGTTGAAATCTACACCAGGAGATTCTTGGTTATGGTCTTCATTAGTAAAGGCATGGAACGAAATTAAGCAAAGGAATGGAACGAAATTAAGCAATGGCTGGGGTGGGGTATTGGGAATGAGTGTAGTGTTAAATTCTAGACTGATAGGTGGGTTAATGGGAAATGCCTAATAGACAGTATTGGAGAGATGGGGTCTCAGAAACAGATAGGAGACGGCCTATTAGGGACTACATTACTTGGGAGGGGGAGTGGAATTGAGGAGCCTTTATGTTGGAATGATCAGTCAGTCTTCACTACTAGAGATGGCTAGCATTAGACCACCTGATTTAACATTAAATTATCCAGATTTTCCTATTTGGATCGGGTCAAAGAATGGGGAGTATTCAGTTTCGGCTACTTATGCTAATCTTCTTTCCTTAAGGGATACTCGATACAATCTAATCTATGGAAAGCTATCTGGAGTTGGGAAGGTCCTTTTAGGATAGGTTGCTTCCTATGGTTAGTGTCTCATGAAAGACTGTTAACGAATTATGAGCGGTTTAGGAGACATCTTTGTCCATCGGATAAATGTATTCATTGCCCACATCAGGCAGAGACGATTATTCATGTCCTACGAGACTGTAAATTTGCTAGACAGGTTTGGATAGATTTAAATCCAAATAGCTTATCTAATGGCTTTTTTAATGGTAACTTGCAGTTGTGGCTGGAAGCAAATTTGCTGGATTAACCTTCGACCTCCCAATGGAAATCCATCTTTGCAGTAGGATGCTGGCTATTATGGCAGTGGAGAAATAAGGACATCTTTGATCCATTATCCCAAAGAACGGTGGTTCCAAGCACGGTGATTAGAAGGACTGTTGAGAATTTCATGAAGGCTTGGAAGATGGTGAGTACGTTATCAAGGAAACCTCATTGCCACTGGGAAGAAATTAGTTCGAATCCGCCTAAAATTAATTTCTGGAAACTAAATACGGATGGATCGGTACGTGGAAATCCAGGCTTGGATGGAGCGGGAGGAATTATTAGGAATTTCGATGGGAATTGGATAAAAGGCTTCCAACAGAATTTGGATTGCTCGACAGTTATGGTTGTTGAATTATGGGCTATCCTTTCGGGGTTAGAGTTGGCCTGGAATTTGGGTTGTAGAAATCTGTTGGTAGAGTCAGATTCAGAAGTGGCGTGTAATTTGGTGCGGAACAGATCTTAG

mRNA sequence

ATGAGGTTGAATAATTGGGCTGCTGCCTCTCTTTCCTTCGTAGGGCGAGCTACTCTAGTACAATCTATCATTCAAGCTATCCCAACTTATGCTATGCATATATTTCGGTTTCCAGGAAATGTCTGTAAGGAAATAGATAAACTGAGTAGAAGTTTTCTGTGGGGTCACACTAGGGAAAGATCTCAGATCCACCTAGTTAATTGGGATAGGATTACTAGACTTAAGAAGGAAGGGGGCCTTAGTTTACATAGAGTTCAAGATTTTAACATAGCTTTGATTGGTAAATTTGCGTGGGGTTTATTAAATCGGCCAAATGATTTGTGGGCCCAACTTCTCATGAATAAATACAAGGACCGATGGAAGGAGGACTGGAGGTTGAAATCTACACCAGGAGATTCTTGGTTATGGTCTTCATTAGTAAAGGCATGGAACGAAATTAAGCAAAGGAATGGAACGAAATTAAGCAATGGCTGGGGTGGGGTATTGGGAATGAGTGTAGTGTTAAATTCTAGACTGATAGATTTTCCTATTTGGATCGGGTCAAAGAATGGGGAGTATTCAGTTTCGGCTACTTATGCTAATCTTCTTTCCTTAAGGGATACTCGATACAATCTAATCTATGGAAAGCTATCTGGAGTTGGGAAGGCAGAGACGATTATTCATGTCCTACGAGACTGTAAATTTGCTAGACAGTGGAGAAATAAGGACATCTTTGATCCATTATCCCAAAGAACGGTGGTTCCAAGCACGGTGATTAGAAGGACTGTTGAGAATTTCATGAAGGCTTGGAAGATGGTGAGTACGTTATCAAGGAAACCTCATTGCCACTGGGAAGAAATTAGTTCGAATCCGCCTAAAATTAATTTCTGGAAACTAAATACGGATGGATCGGTACGTGGAAATCCAGGCTTGGATGGAGCGGGAGGAATTATTAGGAATTTCGATGGGAATTGGATAAAAGGCTTCCAACAGAATTTGGATTGCTCGACAGTTATGGTTGTTGAATTATGGGCTATCCTTTCGGGGTTAGAGTTGGCCTGGAATTTGGGTTGTAGAAATCTGTTGGTAGAGTCAGATTCAGAAGTGGCGTGTAATTTGGTGCGGAACAGATCTTAG

Coding sequence (CDS)

ATGAGGTTGAATAATTGGGCTGCTGCCTCTCTTTCCTTCGTAGGGCGAGCTACTCTAGTACAATCTATCATTCAAGCTATCCCAACTTATGCTATGCATATATTTCGGTTTCCAGGAAATGTCTGTAAGGAAATAGATAAACTGAGTAGAAGTTTTCTGTGGGGTCACACTAGGGAAAGATCTCAGATCCACCTAGTTAATTGGGATAGGATTACTAGACTTAAGAAGGAAGGGGGCCTTAGTTTACATAGAGTTCAAGATTTTAACATAGCTTTGATTGGTAAATTTGCGTGGGGTTTATTAAATCGGCCAAATGATTTGTGGGCCCAACTTCTCATGAATAAATACAAGGACCGATGGAAGGAGGACTGGAGGTTGAAATCTACACCAGGAGATTCTTGGTTATGGTCTTCATTAGTAAAGGCATGGAACGAAATTAAGCAAAGGAATGGAACGAAATTAAGCAATGGCTGGGGTGGGGTATTGGGAATGAGTGTAGTGTTAAATTCTAGACTGATAGATTTTCCTATTTGGATCGGGTCAAAGAATGGGGAGTATTCAGTTTCGGCTACTTATGCTAATCTTCTTTCCTTAAGGGATACTCGATACAATCTAATCTATGGAAAGCTATCTGGAGTTGGGAAGGCAGAGACGATTATTCATGTCCTACGAGACTGTAAATTTGCTAGACAGTGGAGAAATAAGGACATCTTTGATCCATTATCCCAAAGAACGGTGGTTCCAAGCACGGTGATTAGAAGGACTGTTGAGAATTTCATGAAGGCTTGGAAGATGGTGAGTACGTTATCAAGGAAACCTCATTGCCACTGGGAAGAAATTAGTTCGAATCCGCCTAAAATTAATTTCTGGAAACTAAATACGGATGGATCGGTACGTGGAAATCCAGGCTTGGATGGAGCGGGAGGAATTATTAGGAATTTCGATGGGAATTGGATAAAAGGCTTCCAACAGAATTTGGATTGCTCGACAGTTATGGTTGTTGAATTATGGGCTATCCTTTCGGGGTTAGAGTTGGCCTGGAATTTGGGTTGTAGAAATCTGTTGGTAGAGTCAGATTCAGAAGTGGCGTGTAATTTGGTGCGGAACAGATCTTAG

Protein sequence

MRLNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERSQIHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRWKEDWRLKSTPGDSWLWSSLVKAWNEIKQRNGTKLSNGWGGVLGMSVVLNSRLIDFPIWIGSKNGEYSVSATYANLLSLRDTRYNLIYGKLSGVGKAETIIHVLRDCKFARQWRNKDIFDPLSQRTVVPSTVIRRTVENFMKAWKMVSTLSRKPHCHWEEISSNPPKINFWKLNTDGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELWAILSGLELAWNLGCRNLLVESDSEVACNLVRNRS

Homology

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BLAST of Moc03g22590 vs. NCBI nr
Match: OMO90964.1 (reverse transcriptase [Corchorus capsularis])

HSP 1 Score: 191.0 bits (484), Expect = 1.8e-44
Identity = 129/409 (31.54%), Postives = 195/409 (47.68%), Query Frame = 0


Query: 3    LNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERSQ 62
            L+ W A  L+  GRATLV S++ +IPTY M   + P +   ++D L+R FLWG T  +  
Sbjct: 1262 LSGWKAKLLNMAGRATLVSSVMSSIPTYTMLTTKLPASCRNKLDMLNRRFLWGGTENKKA 1321

Query: 63   IHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRW-- 122
            +HLV+WD + + KK GGL L +++  N  L+ K AW  L++P+ LW Q L  KY+ +   
Sbjct: 1322 LHLVSWDEVCKPKKFGGLGLRQMEYNNRVLLQKTAWRFLHQPHSLWVQCLCAKYRIQGDV 1381

Query: 123  ----KEDWRLKSTPGDSW--LWSSLVKAWNEIKQRNGTKLSNGWG-------GVLGMSVV 182
                +E    K++   SW  L  +L + +  +K+R G      +G        +  + V 
Sbjct: 1382 FYFIREAGSRKASWSSSWKGLAGALEELFCGLKKRVGRGDKENFGLEDCSYANIWSLRVP 1441

Query: 183  LNSRLIDFPIWIG---SKNGEYSVSATYANLLSLRDTRYNLIYGKLSGVGKAETIIHVLR 242
            L      + +W G   +    YS   + + + S             S  G  E IIHVLR
Sbjct: 1442 LRWIFFLWLVWRGRIVTNALRYSWGISSSAICS-------------SCNGGVEDIIHVLR 1501

Query: 243  DCKFARQ----------------------W--RNKDIFDPLSQRTVVPSTVIRRTVENFM 302
            DC +A+Q                      W  R + +FDP     V     I   +    
Sbjct: 1502 DCVWAKQGLNLKNRSVSQVTLFVTTIWRIWTSRCRRVFDP---NEVASLDAIVYNIAGTT 1561

Query: 303  KAWKMVSTLSRKPHCHWEEISSNPPKINFWKLNTDGSVRGNPGLDGAGGIIRNFDGNWIK 362
            K+     ++   P      IS  PP  +F KLNTDG+ +GNPG  GAGG+IRN +G W+ 
Sbjct: 1562 KSVIAAMSMPSPPTGPTTSISWTPPGEHFVKLNTDGAAKGNPGAAGAGGVIRNTEGGWVV 1621

Query: 363  GFQQNLDCSTVMVVELWAILSGLELAWNLGCRNLLVESDSEVACNLVRN 370
            GF  +L   + +  EL A+  GL LAW  G R ++ E D++V  +L+ +
Sbjct: 1622 GFAAHLGTCSNVAAELHALRLGLTLAWREGFRAVICEVDAKVILDLLNS 1654

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BLAST of Moc03g22590 vs. NCBI nr
Match: OMO52883.1 (reverse transcriptase [Corchorus capsularis])

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-43
Identity = 133/444 (29.95%), Postives = 204/444 (45.95%), Query Frame = 0


Query: 3    LNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERSQ 62
            L+ W A  L+  GRATLV S++ +IPTY M   + P +   ++D L+R FLWG T  +  
Sbjct: 913  LSGWKAKLLNMAGRATLVSSVMSSIPTYTMLTTKLPASCRNKLDMLNRRFLWGGTENKKA 972

Query: 63   IHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKY------ 122
            +HLV+WD + + KK GGL L +++  N  L+ K AW  L++P+ LW Q L  KY      
Sbjct: 973  LHLVSWDEVCKPKKFGGLGLRQMKYHNRVLLQKTAWRFLHQPHSLWVQCLCAKYRIQGDV 1032

Query: 123  ----------KDRWKEDWR------------LKSTPG---------DSWLWSSLVKAWNE 182
                      K  W   W+            LK   G         D+WL   L+ +   
Sbjct: 1033 FDSIREAGSRKVSWSSSWKGLAGVLEGLFCGLKKRVGRGDKVCFWLDTWLEEPLINSLEA 1092

Query: 183  IKQRNGTKL--------SNGWGGVL---GMSVVLNSRLIDFPI-WIGSKNGEYSVSATYA 242
            +     T +           W   +    +   +  R++ +P+  + S +  Y   +T +
Sbjct: 1093 LPSFLDTTMMVSDFIVDGGSWNADMLFAQLPYEIALRILGYPLPKVVSMSDSYYWGST-S 1152

Query: 243  NLLSLRDTRYNLIYGKL--SGVGKAETIIHVLRDCKFARQ-------------------- 302
            N+ +     + +    +  S  G  E IIHVLRDC +A+Q                    
Sbjct: 1153 NVTNALRYSWGISSSAICSSCNGGVEDIIHVLRDCVWAKQGLNLKNRSVSQVTLFVTTIW 1212

Query: 303  --W--RNKDIFDPLSQRTVVPSTV--IRRTVENFMKAWKMVSTLSRKPHCHWEEISSNPP 362
              W  R + +FDP ++ T + + V  I  T  + + A  M S     P      IS  PP
Sbjct: 1213 RIWTSRCRRVFDP-NEVTSLDAIVYNIAGTTRSVVAAMSMPS----PPTGPTASISWTPP 1272

Query: 363  KINFWKLNTDGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELWAILSGLEL 370
              +F KLNTDG+ +GNPG  GAGG+IRN +G W+ GF  +L   + +  EL  +  GL L
Sbjct: 1273 GEHFVKLNTDGAAKGNPGAAGAGGVIRNTEGGWVVGFAAHLGTCSNVAAELHVLRLGLTL 1332

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BLAST of Moc03g22590 vs. NCBI nr
Match: XP_024448418.1 (uncharacterized protein LOC112325720 [Populus trichocarpa])

HSP 1 Score: 182.6 bits (462), Expect = 6.3e-42
Identity = 133/517 (25.73%), Postives = 213/517 (41.20%), Query Frame = 0


Query: 2    RLNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERS 61
            +L  W A++LS  G+ TL +S++  IP Y M +   P + C EI+K+ R F+WG    R 
Sbjct: 620  KLAGWKASNLSLAGKITLCKSVLSTIPLYPMQVAVIPKHTCYEIEKICRRFIWGQQEGRD 679

Query: 62   QIHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRWK 121
            +IHLVNW+++ R K+EGG+ L +++  N A + K AWG++ + N LW ++L +KY    +
Sbjct: 680  KIHLVNWNKMCRPKEEGGMGLKKMKSMNRAFLMKLAWGMM-KENHLWVKVLKDKYMSTRR 739

Query: 122  EDWRLKSTPGDSWLWSSLVKAWNEIKQR------NGTKL---------SNG--------- 181
             +  L + P DS LW ++ K W+ + Q       NG ++         SNG         
Sbjct: 740  REGNLVAVPSDSVLWKAICKEWDTVNQNATWNVGNGKRILFWRDSWLESNGLIINHLERE 799

Query: 182  ---------------------WG------------GVLGMSVVLNSRLIDFPIWIGSKNG 241
                                 W              ++G +  +   + D   W  S N 
Sbjct: 800  VQVKTLDYTVADMVDDRGNWKWDVFAHLIPMQIVMSIVGYTPPMQDGIDDMVGWDHSSNE 859

Query: 242  EYSVSATYANLLSLRDTRYNLIY---GKLSGVGK-------------------------- 301
            + +V   Y  L    +  ++LI+    K  G+ +                          
Sbjct: 860  KLTVRTAYMVLEERGEMDHDLIWRLIRKWQGMKRIKVFLWTVAHNSIMTNDLRYRRHLTA 919

Query: 302  ----------AETIIHVLRDCKFARQ-W------RNKDIFDPLSQRTVVPSTVIRRTVEN 361
                       ET+ H LRDC  AR+ W       N+++F   +    + S +  R    
Sbjct: 920  NRFCDHCGTEVETLTHALRDCPKARKIWEVFVKVENRELFFSQNWYAWLVSNMSARNRTT 979

Query: 362  FMKAWKMVSTLSR----KPHC---------HW---------------------------- 372
               AW +   ++     K  C         +W                            
Sbjct: 980  DHGAWSLEFGIALWYIWKERCNRVFGVDQGNWFRAILAIKRMVRDTEFTQRHGNDEGRSS 1039

[Close]

BLAST of Moc03g22590 vs. NCBI nr
Match: KAF7812935.1 (ribonuclease H [Senna tora])

HSP 1 Score: 180.3 bits (456), Expect = 3.1e-41
Identity = 136/474 (28.69%), Postives = 203/474 (42.83%), Query Frame = 0


Query: 2   RLNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERS 61
           RL  W A+ LS  GRATL QS+I A+P Y M     P  + KEI+K+ R FLWG T E+ 
Sbjct: 189 RLAGWKASCLSLAGRATLAQSVISAVPLYYMQHSSIPIGITKEIEKIERGFLWGSTNEKR 248

Query: 62  QIHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRWK 121
           ++H ++W  +   K  GG  +  + + N A   K  W +L+  N LW ++++NKYK    
Sbjct: 249 KMHQLSWSTVCMPKDAGGFGIRSLTEMNKAFKLKLLWQILSNQNRLWVKIILNKYKIGSY 308

Query: 122 EDWRLKSTPGDSWLWSSLVKAWNEIKQRNGTKLSNG-----WGGVLGMSVVLN---SRLI 181
            +  L S   DS LW  + K W E  +    ++ NG     W       +V N   SR++
Sbjct: 309 PNPVLSSKNTDSKLWKEMCKLWPEFVENVHWEIGNGSKTSFWNDRKLEEMVPNHVLSRIL 368

Query: 182 -----------DFPIWIGSKNGEYSVSATYANLL----------------SLRDTRYNLI 241
                      D  +W    N  +S+S+ Y  L+                S    R  LI
Sbjct: 369 ETNPPNPLLGPDQVMWSPGNNDVFSISSAYKVLMKYDGSRADGMWKCLWKSKIQQRSKLI 428

Query: 242 YGKL--------------SGVGKA--------ETIIHVLRD-CKFARQW------RNKDI 301
             +L              SG   +        ET IH LRD CK A+ W      R++ +
Sbjct: 429 LWRLGHDRLPTRSLIASWSGASSSCPWCDNNRETNIHGLRDCCKVAQIWKRFLNSRDRAL 488

Query: 302 FDPLSQRTVVPSTVIRRTV--------------ENFMKAWKMVS------TLSRKPHCHW 361
           F  L  +  +   + R ++              E F K W+ +       +   + HC  
Sbjct: 489 FFNLPSKEWIHWNLKRNSLFCNIPWPLVFSVACELFWK-WRNMKNKDHEFSFPYEAHCQI 548

Query: 362 EEISSN-----------------------PPKINFWKLNTDGSVRGNPGLDGAGGIIRNF 369
            +I+ N                        P+ ++ K+N DG++    G  G GG+ RN 
Sbjct: 549 LQIAKNHAQAFKPMVNTGTLRTEKSTNWSKPEKDWIKVNVDGAMCSLSGKTGCGGLARNN 608

[Close]

BLAST of Moc03g22590 vs. NCBI nr
Match: XP_023893189.1 (uncharacterized protein LOC112005172 [Quercus suber])

HSP 1 Score: 180.3 bits (456), Expect = 3.1e-41
Identity = 140/511 (27.40%), Postives = 221/511 (43.25%), Query Frame = 0


Query: 2    RLNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERS 61
            +L  W A  LSF GRA L++S++ AIP + M     P  VC+++DK++R FLWG T E+ 
Sbjct: 886  KLAGWKAKFLSFAGRAVLIKSVMSAIPNHIMQGAVLPVQVCEKLDKINRDFLWGSTNEKR 945

Query: 62   QIHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRWK 121
            ++ ++ W +I + K+EGGL +   +  NIAL+ K  W + +  + LWA++++NKY  + +
Sbjct: 946  RMSMMGWSKIIKSKEEGGLGIQEARAKNIALLPKLNWRMFHEQDALWARVILNKYCSQSR 1005

Query: 122  ----EDWRLKSTP--------------GDSWLWSS--LVKAWNEIKQRNGTKLSNGWGGV 181
                +  +L S+P              G SW   +   VK W +    NG  L     G 
Sbjct: 1006 ITSTKPDKLPSSPNWKAINLGFPIFQKGISWGIGNGHGVKVWMD-NWVNGDSLRGMIEGP 1065

Query: 182  LG-------------------------MSVVLNSRLIDFPI-----------WIGSKNGE 241
            LG                         +S  +  ++   PI           W  SKNGE
Sbjct: 1066 LGQGEQNLTVAELYGGQKWNWELVSFDLSQHITEKIKAVPIQLHGSGRDAVWWKFSKNGE 1125

Query: 242  YSVSATYANL-----------------------------LSLRDT--------RYNLIYG 301
            ++V + Y  +                             L L D+           ++  
Sbjct: 1126 FTVGSAYRLVIQGEKPIMPFHGNWIWKLDILPRITCFLWLCLHDSITVKDVLLARGIMCD 1185

Query: 302  KLSGVGKA--ETIIHVLRDCKFARQ-WRNKDI-----------------FDPLSQ----- 361
            K+  + +   ETI+HVLRDC FAR  WRN ++                 ++ LS+     
Sbjct: 1186 KICPMCRVQDETIVHVLRDCVFARNLWRNLEVPPSLVNSFTDTVEGWLKYNCLSEVRHRG 1245

Query: 362  ------------------------RTVVPSTVIRRT-VENFMKAWKMVSTLSRKPHCHWE 370
                                       +P T++ +  +    + +  VS   +       
Sbjct: 1246 SIPWCFLFLFAIWNLWKNRNKVVFENSIPDTMLHKVCLSQAREYFYCVSKAKQVTSRAVI 1305

[Close]

BLAST of Moc03g22590 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.6e-34
Identity = 125/516 (24.22%), Postives = 195/516 (37.79%), Query Frame = 0


Query: 2   RLNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERS 61
           R++ W   +LSF GR TL ++++ ++P ++M     P ++   +D+LSR+FLWG T E+ 
Sbjct: 23  RMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKK 82

Query: 62  QIHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKY----- 121
           + HLV W ++   KKEGGL +   +  N ALI K  W LL   N LW  +L  KY     
Sbjct: 83  KQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEI 142

Query: 122 --------KDRWKEDWRLKS-------TPGDSWL--WSSLVKAWNE--------IKQRNG 181
                   K  W   WR  +       + G  W+      ++ W +        ++  NG
Sbjct: 143 RDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNG 202

Query: 182 TKLSN--------------GWG-GVLGMSVVLNSRL-------------IDFPIWIGSKN 241
            + ++              GW    +      N+RL              D   W  S++
Sbjct: 203 ERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQD 262

Query: 242 GEYSVSATYANLLSLRDTRYNLI------------------------------------Y 301
           G++SV + Y  L      R N+                                     +
Sbjct: 263 GQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRH 322

Query: 302 GKLSGV-----GKAETIIHVLRDC--------KFARQWRNKDIF---------DPLSQRT 361
              S V     G  E+++HVLRDC        +   Q R +  F         D L  R+
Sbjct: 323 LSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNLGDRS 382

Query: 362 ---VVPSTVIRRTVENFMKAWKMVSTLSRKPHCH-------------WEEISSN------ 369
               +P + I   +  +   W+  +       C              +   S N      
Sbjct: 383 GCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVYRAHSGNVLVGIT 442

[Close]

BLAST of Moc03g22590 vs. ExPASy TrEMBL
Match: A0A2N9EVJ4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10699 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.3e-45
Identity = 137/451 (30.38%), Postives = 194/451 (43.02%), Query Frame = 0


Query: 2    RLNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERS 61
            +L  W A +LS  GR TL+ S+  AIPT+ M     P  VC  +DKL+R+FLWG T  + 
Sbjct: 937  KLAGWKAKTLSMAGRCTLINSVSSAIPTHVMQCCLLPSKVCANLDKLNRNFLWGDTSAKK 996

Query: 62   QIHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRWK 121
            +IHL+ WD I+R K EGGL + R +  N A + K  W L     D+WA  L NKY     
Sbjct: 997  KIHLMKWDLISRPKDEGGLGIKRSRCRNKAFLAKRMWALRLGSEDVWALSLRNKYPPTRS 1056

Query: 122  EDWRLKSTPGDSWLWSSLVKAWNEIKQRNGTKLSNGWGG--------------------V 181
               +   T      W SL +A N I  +    L+  W                      +
Sbjct: 1057 RFCQKSIT------WKSLQQA-NHICDKESLHLNEVWDSSGSWCLDTLSMLLPPSIINTI 1116

Query: 182  LGMSVVLNSRLIDFPIWIGSKNGEYSVSATYANLLSLRDTR------------------- 241
            L +   + S L D   W  S NG +S ++ Y   L+L  T                    
Sbjct: 1117 LAVPRPITSPLEDGICWKPSSNGLFSSTSAYKIALNLDQTLSPPSCWRWIWKLNTLPRIT 1176

Query: 242  ---YNLIYGKLSGV------------------GKAETIIHVLRDCKFARQ-WRNKDIFDP 301
               + L + KL                        E+ +H+ RDC F +  W        
Sbjct: 1177 FFIWQLCHEKLPTKILLAQRRITPDNICPLCNVDPESCLHLFRDCPFIQPLWH------- 1236

Query: 302  LSQRTVVPSTVIRRTVENFMKAWKMVSTL-SRKPHCHWEEI-------------SSN--- 361
            L   T   +   +     + K W + +T  S  P   W++I             S+N   
Sbjct: 1237 LLGFTATSNFFTQTPTRTWAKHWSLDTTSPSLFPQFQWKDIFPVLIWTIWTAQPSTNIET 1296

Query: 362  ------PPKINFWKLNTDGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELW 369
                  PP  NF+KLNTDGSV GNPG  GAGGIIR+  GNW+KGF + +  +  +  ELW
Sbjct: 1297 ILVNWKPPPPNFFKLNTDGSVTGNPGPAGAGGIIRDHTGNWVKGFSRKIGNTNSLAAELW 1356

[Close]

BLAST of Moc03g22590 vs. ExPASy TrEMBL
Match: A0A1R3J823 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_07242 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.6e-45
Identity = 129/409 (31.54%), Postives = 195/409 (47.68%), Query Frame = 0


Query: 3    LNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERSQ 62
            L+ W A  L+  GRATLV S++ +IPTY M   + P +   ++D L+R FLWG T  +  
Sbjct: 1262 LSGWKAKLLNMAGRATLVSSVMSSIPTYTMLTTKLPASCRNKLDMLNRRFLWGGTENKKA 1321

Query: 63   IHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRW-- 122
            +HLV+WD + + KK GGL L +++  N  L+ K AW  L++P+ LW Q L  KY+ +   
Sbjct: 1322 LHLVSWDEVCKPKKFGGLGLRQMEYNNRVLLQKTAWRFLHQPHSLWVQCLCAKYRIQGDV 1381

Query: 123  ----KEDWRLKSTPGDSW--LWSSLVKAWNEIKQRNGTKLSNGWG-------GVLGMSVV 182
                +E    K++   SW  L  +L + +  +K+R G      +G        +  + V 
Sbjct: 1382 FYFIREAGSRKASWSSSWKGLAGALEELFCGLKKRVGRGDKENFGLEDCSYANIWSLRVP 1441

Query: 183  LNSRLIDFPIWIG---SKNGEYSVSATYANLLSLRDTRYNLIYGKLSGVGKAETIIHVLR 242
            L      + +W G   +    YS   + + + S             S  G  E IIHVLR
Sbjct: 1442 LRWIFFLWLVWRGRIVTNALRYSWGISSSAICS-------------SCNGGVEDIIHVLR 1501

Query: 243  DCKFARQ----------------------W--RNKDIFDPLSQRTVVPSTVIRRTVENFM 302
            DC +A+Q                      W  R + +FDP     V     I   +    
Sbjct: 1502 DCVWAKQGLNLKNRSVSQVTLFVTTIWRIWTSRCRRVFDP---NEVASLDAIVYNIAGTT 1561

Query: 303  KAWKMVSTLSRKPHCHWEEISSNPPKINFWKLNTDGSVRGNPGLDGAGGIIRNFDGNWIK 362
            K+     ++   P      IS  PP  +F KLNTDG+ +GNPG  GAGG+IRN +G W+ 
Sbjct: 1562 KSVIAAMSMPSPPTGPTTSISWTPPGEHFVKLNTDGAAKGNPGAAGAGGVIRNTEGGWVV 1621

Query: 363  GFQQNLDCSTVMVVELWAILSGLELAWNLGCRNLLVESDSEVACNLVRN 370
            GF  +L   + +  EL A+  GL LAW  G R ++ E D++V  +L+ +
Sbjct: 1622 GFAAHLGTCSNVAAELHALRLGLTLAWREGFRAVICEVDAKVILDLLNS 1654

[Close]

BLAST of Moc03g22590 vs. ExPASy TrEMBL
Match: A0A2N9GR89 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29987 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.3e-44
Identity = 135/454 (29.74%), Postives = 204/454 (44.93%), Query Frame = 0


Query: 2   RLNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERS 61
           +L  W A+ LS  GR  L+QS+  AIP Y M     P  VCK++DK++R+FLWG T  + 
Sbjct: 323 KLAGWKASLLSMAGRHVLIQSVTSAIPEYLMQGTLLPAKVCKKVDKVNRNFLWGSTLVKK 382

Query: 62  QIHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKY----- 121
           ++H+V W+++TR KK GGL L   +  N+AL+ K  W ++N     WA++L  KY     
Sbjct: 383 KVHMVRWEKVTRPKKFGGLGLVAARPRNLALLAKLNWRMMNEEEAPWARMLKAKYLGPRG 442

Query: 122 ----KDRWKEDWRLKSTPGDSWLWSSLVK---------AWNEIKQRNGTKLSNGWGGVLG 181
               +      W      G+  L+  L K          WNE +  +     NG   +L 
Sbjct: 443 NFLVRKPCSRTWS-ACKAGEDILYQGLRKFVRSGNSTSFWNE-RWSSADGCGNGNWNLLS 502

Query: 182 MSVVLNSRL-------------IDFPIWIGSKNGEYSVSATYA-----NLLSLRDTRYNL 241
             + + +R              ID   W  S NG++S+++ Y+     N L+     +N 
Sbjct: 503 FDLPVQTRKILQGTPLNRYASGIDAIGWAYSSNGDFSLNSAYSLAKALNPLNPPTDNFNW 562

Query: 242 IYGKLSGVGKA------------------------------------ETIIHVLRDCKFA 301
           I+ K++   K                                     E+IIHVLRDC FA
Sbjct: 563 IW-KVAAFPKIQMFLWLCVNNGIPVKEVLGSRGLNIEQKCSICKRENESIIHVLRDCSFA 622

Query: 302 RQ-WRNKDIFDPLSQRTVVP-------STVIRRTVENFMKAWKMVSTLSRKPHCHWEE-- 361
              W    I D +    ++P       + + + T  +    WK +   +  P        
Sbjct: 623 VSFWIRTSIPDSVISSFILPLWDWMHKNCLAKETTNHKGVPWKFLFLAAPSPPMLPSHSV 682

Query: 362 --ISSNPPKINFWKLNTDGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELW 372
             +    P + + KLNTDG+   N G+ G GG+IR+ DGNWI+GF Q    S+  + ELW
Sbjct: 683 ITVKWQKPPVGWVKLNTDGASSQNRGVAGGGGLIRDCDGNWIQGFSQAGVVSS-FLAELW 742

[Close]

BLAST of Moc03g22590 vs. ExPASy TrEMBL
Match: A0A2N9FFE9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17458 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.5e-44
Identity = 131/428 (30.61%), Postives = 190/428 (44.39%), Query Frame = 0


Query: 1    MRLNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRER 60
            ++ ++W A  LS  GR  LVQS+  AIP Y M     P  VC  +DKL+R FLWG T E 
Sbjct: 1339 IKASSWKAKLLSPAGRVILVQSVTSAIPAYYMQNVALPTRVCSTLDKLNRDFLWGSTEES 1398

Query: 61   SQIHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRW 120
             ++H+V+W +I R +  GGL L+  +  NIAL+ K  W  +  PN LWA+ L+ KY    
Sbjct: 1399 KKMHMVSWGKICRPRDLGGLGLYSTKARNIALLAKLNWRAMEDPNSLWAKTLIAKYCPNG 1458

Query: 121  KEDWRLKSTPGDSWLWSSLVKAWNEIKQRNGTKLSNG-----WGGVLGMSVVLNSRLIDF 180
              D RL +    S  W  L K    +   N + LS          +  +SV  N  L D 
Sbjct: 1459 IMDGRLGTRRSGSSNWKGLKKGHEGVSMWNFSSLSLDIPSCIRESIKAISVCPNRPLADK 1518

Query: 181  PIWIGSKNGEYSVSATYA---NLLS----------------------------------- 240
             +W  S  G++++   Y+   N  S                                   
Sbjct: 1519 RVW-DSVGGDFNLGKAYSIACNNFSECSSLNPSSWIWKVKTSPRIKFFLWQCYHLSVPVR 1578

Query: 241  --LRDTRYNLIYGKLSGVGKAETIIHVLRDC-------------KFARQWRNKDIFDPLS 300
              L     N+       +   E++IH+LRDC                  + +  +FD + 
Sbjct: 1579 EILASRGINIPTSCPRCLAPNESLIHMLRDCPDSIAFWSSFRFPSLGNHFYSASLFDWIH 1638

Query: 301  QRTVVPSTVIRRTVENFMKAWKMVS-TLSRKPHCHWEEISSNPPKINFWKLNTDGSVRGN 360
               +  ST         + ++ + S   S+  H     I    P + ++KLNTDGS  GN
Sbjct: 1639 SNCIASSTHDHNIPWQSLFSFGIWSLCYSKVKHMVPTPIKWVVPPVGWYKLNTDGSSVGN 1698

Query: 361  PGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELWAILSGLELAWNLGCRNLLVESDSE 370
            PGL G GG+IRN  G+W+ GF + +  +T +  EL A+  GL LA +LG  NL +E DS 
Sbjct: 1699 PGLAGGGGVIRNHVGDWVGGFSRAIGITTSVQAELRALKDGLNLAIDLGILNLEIEMDSL 1758

[Close]

BLAST of Moc03g22590 vs. ExPASy TrEMBL
Match: A0A1R3G486 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_29042 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-43
Identity = 133/444 (29.95%), Postives = 204/444 (45.95%), Query Frame = 0


Query: 3    LNNWAAASLSFVGRATLVQSIIQAIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERSQ 62
            L+ W A  L+  GRATLV S++ +IPTY M   + P +   ++D L+R FLWG T  +  
Sbjct: 913  LSGWKAKLLNMAGRATLVSSVMSSIPTYTMLTTKLPASCRNKLDMLNRRFLWGGTENKKA 972

Query: 63   IHLVNWDRITRLKKEGGLSLHRVQDFNIALIGKFAWGLLNRPNDLWAQLLMNKY------ 122
            +HLV+WD + + KK GGL L +++  N  L+ K AW  L++P+ LW Q L  KY      
Sbjct: 973  LHLVSWDEVCKPKKFGGLGLRQMKYHNRVLLQKTAWRFLHQPHSLWVQCLCAKYRIQGDV 1032

Query: 123  ----------KDRWKEDWR------------LKSTPG---------DSWLWSSLVKAWNE 182
                      K  W   W+            LK   G         D+WL   L+ +   
Sbjct: 1033 FDSIREAGSRKVSWSSSWKGLAGVLEGLFCGLKKRVGRGDKVCFWLDTWLEEPLINSLEA 1092

Query: 183  IKQRNGTKL--------SNGWGGVL---GMSVVLNSRLIDFPI-WIGSKNGEYSVSATYA 242
            +     T +           W   +    +   +  R++ +P+  + S +  Y   +T +
Sbjct: 1093 LPSFLDTTMMVSDFIVDGGSWNADMLFAQLPYEIALRILGYPLPKVVSMSDSYYWGST-S 1152

Query: 243  NLLSLRDTRYNLIYGKL--SGVGKAETIIHVLRDCKFARQ-------------------- 302
            N+ +     + +    +  S  G  E IIHVLRDC +A+Q                    
Sbjct: 1153 NVTNALRYSWGISSSAICSSCNGGVEDIIHVLRDCVWAKQGLNLKNRSVSQVTLFVTTIW 1212

Query: 303  --W--RNKDIFDPLSQRTVVPSTV--IRRTVENFMKAWKMVSTLSRKPHCHWEEISSNPP 362
              W  R + +FDP ++ T + + V  I  T  + + A  M S     P      IS  PP
Sbjct: 1213 RIWTSRCRRVFDP-NEVTSLDAIVYNIAGTTRSVVAAMSMPS----PPTGPTASISWTPP 1272

Query: 363  KINFWKLNTDGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELWAILSGLEL 370
              +F KLNTDG+ +GNPG  GAGG+IRN +G W+ GF  +L   + +  EL  +  GL L
Sbjct: 1273 GEHFVKLNTDGAAKGNPGAAGAGGVIRNTEGGWVVGFAAHLGTCSNVAAELHVLRLGLTL 1332

[Close]

BLAST of Moc03g22590 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 6.4e-16
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 26  AIPTYAMHIFRFPGNVCKEIDKLSRSFLWGHTRERSQIHLVNWDRITRLKKEGGLSLHRV 85
           A+PTY M  F  P  VCK+I  +   F W + +E   +H   WD ++  K EGG+    +
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 86  QDFNIALIGKFAWGLLNRPNDLWAQLLMNKYKDRWKE-DWRLKSTPGDSWLWSSLVKAWN 145
           + FN+AL+GK  W +L+RP  L A++  ++Y  +    +  L S P  S++W S+  +  
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRP--SFVWKSIHASQE 121

Query: 146 EIKQRNGTKLSNG 158
            ++Q     + NG
Sbjct: 122 ILRQGARAVVGNG 132

[Close]

BLAST of Moc03g22590 vs. TAIR 10
Match: AT5G42905.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-12
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 285 PKINFWKLNTDGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELWAILSGLE 344
           P + + K+NTDG+ RGNPGL  AGG++R+ +G W  GF  N+   +    ELW +  GL 
Sbjct: 143 PCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLY 202

Query: 345 LAWNLGCRNLLVESDSEVACNLVR 369
            AW      + +E DSE     ++
Sbjct: 203 FAWEKKVPRVELEVDSEAIVGFLK 226

[Close]

BLAST of Moc03g22590 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 55.8 bits (133), Expect = 8.3e-08
Identity = 26/76 (34.21%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 295 DGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELWAILSGLELAWNLGCRNL 354
           DG+ +GNPGL GA  +++  DG+ I   +Q L  +T    E  A++ GL+ A   G +N+
Sbjct: 222 DGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGYKNI 281

Query: 355 LVESDSEVACNLVRNR 371
            V+ DS++ C  ++ +
Sbjct: 282 KVKGDSKLVCMQIKGQ 297

[Close]

BLAST of Moc03g22590 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.6e-06
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 295 DGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELWAILSGLELAWNLGCRNL 354
           DG+ +GNPGL GA  +++  DG+ I   +Q L  +T    E   ++ GL+ A   G   +
Sbjct: 191 DGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGYTKI 250

Query: 355 LVESDSEVAC 365
            V++DS++ C
Sbjct: 251 KVKTDSKLVC 260

[Close]

BLAST of Moc03g22590 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.6e-06
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 295 DGSVRGNPGLDGAGGIIRNFDGNWIKGFQQNLDCSTVMVVELWAILSGLELAWNLGCRNL 354
           DG+ +GNPGL GA  +++  DG+ I   +Q L  +T    E   ++ GL+ A   G   +
Sbjct: 191 DGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGYTKI 250

Query: 355 LVESDSEVAC 365
            V++DS++ C
Sbjct: 251 KVKTDSKLVC 260

The following BLAST results are available for this feature:

BLAST of Moc03g22590 vs. NCBI nr


Match Name	E-value	Identity	Description
OMO90964.1	1.8e-44	31.54	reverse transcriptase [Corchorus capsularis]	[more]
OMO52883.1	4.4e-43	29.95	reverse transcriptase [Corchorus capsularis]	[more]
XP_024448418.1	6.3e-42	25.73	uncharacterized protein LOC112325720 [Populus trichocarpa]	[more]
KAF7812935.1	3.1e-41	28.69	ribonuclease H [Senna tora]	[more]
XP_023893189.1	3.1e-41	27.40	uncharacterized protein LOC112005172 [Quercus suber]	[more]

BLAST of Moc03g22590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	6.6e-34	24.22	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Moc03g22590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9EVJ4	2.3e-45	30.38	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10699 ...	[more]
A0A1R3J823	8.6e-45	31.54	Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_07242 PE=4 SV...	[more]
A0A2N9GR89	4.3e-44	29.74	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29987 ...	[more]
A0A2N9FFE9	9.5e-44	30.61	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17458 PE=4 SV=1	[more]
A0A1R3G486	2.1e-43	29.95	Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_29042 PE=3 SV...	[more]

BLAST of Moc03g22590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	6.4e-16	32.33	Ribonuclease H-like superfamily protein	[more]
AT5G42905.1	1.9e-12	38.10	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G24090.1	8.3e-08	34.21	RNase H family protein	[more]
AT5G51080.1	4.6e-06	34.29	RNase H family protein	[more]
AT5G51080.2	4.6e-06	34.29	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 293..371 e-value: 1.3E-17 score: 63.8
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 286..371 score: 11.488962
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 289..371 e-value: 6.8E-16 score: 60.5
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 262..370
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 292..371 e-value: 7.64271E-23 score: 90.4512
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 288..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g22590.1	Moc03g22590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity