Moc03g21130 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g21130
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr3: 14437277 .. 14437618 (-)
RNA-Seq Expression	Moc03g21130
Synteny	Moc03g21130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACCGAAAGTCGAGGTACAGGTGAAGATCGGAAGGAAGCCACTGGGCTACGATGGGCTCGGTCCCGACCCGTGGCTCGGCCCCGACCCGGGGCTCGGTCCCGACCCGTGGCACGGCCCACGGCCCTCCAGCGGCCCTTCGTCTTCGATCCGCGGTTTCGCCCAGGCCCGCCAACGAAATTAGGGTTAGCTACCTATGGAATGTTCTGGAACAACCTGGCGACTAGAAGTAGCGATCCAGCCTTAGAGGTAAGGGCATCTAAAACTAGCTACATTTCACATTATCCTCCTGCTAACTTAAGCATCGGAGCCCGTGTGACTAGAGTCGCACCGGTTTAG

mRNA sequence

ATGGAAACCGAAAGTCGAGGTACAGGTGAAGATCGGAAGGAAGCCACTGGGCTACGATGGGCTCGGTCCCGACCCGTGGCTCGGCCCCGACCCGGGGCTCGGTCCCGACCCGTGGCACGGCCCACGGCCCTCCAGCGGCCCTTCGTCTTCGATCCGCGGTTTCGCCCAGGCCCGCCAACGAAATTAGGGTTAGCTACCTATGGAATGTTCTGGAACAACCTGGCGACTAGAAGTAGCGATCCAGCCTTAGAGGTAAGGGCATCTAAAACTAGCTACATTTCACATTATCCTCCTGCTAACTTAAGCATCGGAGCCCGTGTGACTAGAGTCGCACCGGTTTAG

Coding sequence (CDS)

ATGGAAACCGAAAGTCGAGGTACAGGTGAAGATCGGAAGGAAGCCACTGGGCTACGATGGGCTCGGTCCCGACCCGTGGCTCGGCCCCGACCCGGGGCTCGGTCCCGACCCGTGGCACGGCCCACGGCCCTCCAGCGGCCCTTCGTCTTCGATCCGCGGTTTCGCCCAGGCCCGCCAACGAAATTAGGGTTAGCTACCTATGGAATGTTCTGGAACAACCTGGCGACTAGAAGTAGCGATCCAGCCTTAGAGGTAAGGGCATCTAAAACTAGCTACATTTCACATTATCCTCCTGCTAACTTAAGCATCGGAGCCCGTGTGACTAGAGTCGCACCGGTTTAG

Protein sequence

METESRGTGEDRKEATGLRWARSRPVARPRPGARSRPVARPTALQRPFVFDPRFRPGPPTKLGLATYGMFWNNLATRSSDPALEVRASKTSYISHYPPANLSIGARVTRVAPV

Homology

[Close]

BLAST of Moc03g21130 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-05
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 83  LEVRASKTSYISHYPPANLSIGARVTRVAPV 114
           LEVRASKTS ISHYPPANLSIGARVTRVAPV
Sbjct: 622 LEVRASKTSDISHYPPANLSIGARVTRVAPV 652

[Close]

BLAST of Moc03g21130 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.1e-06
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0


Query: 83  LEVRASKTSYISHYPPANLSIGARVTRVAPV 114
           LEVRASKTS ISHYPPANLSIGARVTRVAPV
Sbjct: 622 LEVRASKTSDISHYPPANLSIGARVTRVAPV 652

The following BLAST results are available for this feature:

BLAST of Moc03g21130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	1.9e-05	96.77	uncharacterized protein LOC111025293 [Momordica charantia]	[more]

BLAST of Moc03g21130 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g21130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	9.1e-06	96.77	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc03g21130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g21130.1	Moc03g21130.1	mRNA