Moc03g20080 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g20080
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC110412945
Location	chr3: 13527754 .. 13528116 (+)
RNA-Seq Expression	Moc03g20080
Synteny	Moc03g20080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCACCACCACAACAGTATAATCAGAACCAAAGAATCCTACCGCAGCCAGCTCAGAATAATAATACTAGTCTTGAGAACATGTTTAAGGAGTACATGGTGCGCAATAATGCATTGATGCAATCCCAGAATGCCACAATCAAAACTCAAGCAGTGGCAATGAGAAACCTAGAAGTTCAAGTGGGACAACTTGCCAATGATTTGAAAGCGAGACCGCAAGGCTCTTTTCTTGGACATACTGAAGTTCCGAAAAGAGATGGAAAAGAGCAATGCAAGGCGGTAACTTTGAGAAGTGGATTGTCTTACGATGGAAAACGAAGAAAGGAAATGTTTAAAAGCTTGTTATTTGCCTTCCCGTAA

mRNA sequence

ATGCCACCACCACCACAACAGTATAATCAGAACCAAAGAATCCTACCGCAGCCAGCTCAGAATAATAATACTAGTCTTGAGAACATGTTTAAGGAGTACATGGTGCGCAATAATGCATTGATGCAATCCCAGAATGCCACAATCAAAACTCAAGCAGTGGCAATGAGAAACCTAGAAGTTCAAGTGGGACAACTTGCCAATGATTTGAAAGCGAGACCGCAAGGCTCTTTTCTTGGACATACTGAAGTTCCGAAAAGAGATGGAAAAGAGCAATGCAAGGCGGTAACTTTGAGAAGTGGATTGTCTTACGATGGAAAACGAAGAAAGGAAATGTTTAAAAGCTTGTTATTTGCCTTCCCGTAA

Coding sequence (CDS)

ATGCCACCACCACCACAACAGTATAATCAGAACCAAAGAATCCTACCGCAGCCAGCTCAGAATAATAATACTAGTCTTGAGAACATGTTTAAGGAGTACATGGTGCGCAATAATGCATTGATGCAATCCCAGAATGCCACAATCAAAACTCAAGCAGTGGCAATGAGAAACCTAGAAGTTCAAGTGGGACAACTTGCCAATGATTTGAAAGCGAGACCGCAAGGCTCTTTTCTTGGACATACTGAAGTTCCGAAAAGAGATGGAAAAGAGCAATGCAAGGCGGTAACTTTGAGAAGTGGATTGTCTTACGATGGAAAACGAAGAAAGGAAATGTTTAAAAGCTTGTTATTTGCCTTCCCGTAA

Protein sequence

MPPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEVQVGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYDGKRRKEMFKSLLFAFP

Homology

[Close]

BLAST of Moc03g20080 vs. NCBI nr
Match: XP_022150317.1 (uncharacterized protein LOC111018514 [Momordica charantia])

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-40
Identity = 90/107 (84.11%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MPPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEV 60
           MPPPPQQYNQNQR   QPA NNNTSLENMFKEYM RN+ALMQSQNATI+TQA  MRNLEV
Sbjct: 216 MPPPPQQYNQNQRTPSQPAHNNNTSLENMFKEYMARNDALMQSQNATIQTQAAXMRNLEV 275

Query: 61  QVGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYDGKR 108
           Q+GQ ANDLKARPQGSF GHTEV KRDG EQCKAVTLRSGLSY+G +
Sbjct: 276 QMGQXANDLKARPQGSFPGHTEVXKRDGXEQCKAVTLRSGLSYEGPK 322

[Close]

BLAST of Moc03g20080 vs. NCBI nr
Match: XP_022158408.1 (uncharacterized protein LOC111024897, partial [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25
Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   MPPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEV 60
           +PPP QQY  NQR    P QNNN++LENM KEYM R +A++QS       QA +MRN   
Sbjct: 411 IPPPQQQY--NQRTQTPPIQNNNSNLENMMKEYMARTDAVIQS-------QAASMRNFGT 470

Query: 61  QVGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYDG 106
           Q+G LAN+LK RPQGSF GHTE+P+R+GKEQCKAVTLRSGL+YDG
Sbjct: 471 QLGHLANELKNRPQGSFPGHTELPRREGKEQCKAVTLRSGLTYDG 506

[Close]

BLAST of Moc03g20080 vs. NCBI nr
Match: XP_022159345.1 (uncharacterized protein LOC111025764 [Momordica charantia])

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-25
Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 1   MPPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEV 60
           +PPP Q+Y  NQR    P QNNN++LENM KEYM R +A++QS       QA +MRN E 
Sbjct: 184 IPPPQQRY--NQRTQTPPVQNNNSNLENMMKEYMARTDAVIQS-------QAASMRNFET 243

Query: 61  QVGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYD 105
           Q+GQLAN+LK RPQGSF  HTE+PKR+GKEQCKAVTLRSGL+YD
Sbjct: 244 QLGQLANELKNRPQGSFPXHTELPKREGKEQCKAVTLRSGLAYD 278

[Close]

BLAST of Moc03g20080 vs. NCBI nr
Match: XP_022158979.1 (uncharacterized protein LOC111025424 [Momordica charantia])

HSP 1 Score: 115.9 bits (289), Expect = 2.4e-22
Identity = 63/103 (61.17%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 2   PPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEVQ 61
           PPP Q Y  NQR    P QNNN++LEN  KEYM R +A++QS       QA +MRN E Q
Sbjct: 95  PPPQQXY--NQRXQTPPVQNNNSNLENXMKEYMARTDAVIQS-------QAASMRNFETQ 154

Query: 62  VGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYD 105
           +G LAN LK RPQGSF GHTE+PK +GKE CKAVTLRSGL Y+
Sbjct: 155 LGXLANXLKNRPQGSFXGHTELPKXEGKEXCKAVTLRSGLXYB 188

[Close]

BLAST of Moc03g20080 vs. NCBI nr
Match: XP_024027611.1 (uncharacterized protein LOC112093437 [Morus notabilis])

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-16
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 3   PPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEVQV 62
           PP +Q NQ      QP Q ++T +E + KEYM RN++L+Q Q A +++QA ++R LE QV
Sbjct: 396 PPQEQLNQR-----QPHQASSTPMEALLKEYMARNDSLIQGQAALLQSQAASLRTLENQV 455

Query: 63  GQLANDLKARPQGSFLGHTEVPKRDGKEQ----CKAVTLRSG 101
           GQLAN L  RPQGS L  TE P+RDGKEQ    CKA+TLR+G
Sbjct: 456 GQLANVLSNRPQGSLLSDTENPRRDGKEQCKEHCKAITLRNG 492

[Close]

BLAST of Moc03g20080 vs. ExPASy TrEMBL
Match: A0A6J1DAE9 (uncharacterized protein LOC111018514 OS=Momordica charantia OX=3673 GN=LOC111018514 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 9.3e-41
Identity = 90/107 (84.11%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MPPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEV 60
           MPPPPQQYNQNQR   QPA NNNTSLENMFKEYM RN+ALMQSQNATI+TQA  MRNLEV
Sbjct: 216 MPPPPQQYNQNQRTPSQPAHNNNTSLENMFKEYMARNDALMQSQNATIQTQAAXMRNLEV 275

Query: 61  QVGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYDGKR 108
           Q+GQ ANDLKARPQGSF GHTEV KRDG EQCKAVTLRSGLSY+G +
Sbjct: 276 QMGQXANDLKARPQGSFPGHTEVXKRDGXEQCKAVTLRSGLSYEGPK 322

[Close]

BLAST of Moc03g20080 vs. ExPASy TrEMBL
Match: A0A6J1DW02 (uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024897 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   MPPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEV 60
           +PPP QQY  NQR    P QNNN++LENM KEYM R +A++QS       QA +MRN   
Sbjct: 411 IPPPQQQY--NQRTQTPPIQNNNSNLENMMKEYMARTDAVIQS-------QAASMRNFGT 470

Query: 61  QVGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYDG 106
           Q+G LAN+LK RPQGSF GHTE+P+R+GKEQCKAVTLRSGL+YDG
Sbjct: 471 QLGHLANELKNRPQGSFPGHTELPRREGKEQCKAVTLRSGLTYDG 506

[Close]

BLAST of Moc03g20080 vs. ExPASy TrEMBL
Match: A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.4e-25
Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 1   MPPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEV 60
           +PPP Q+Y  NQR    P QNNN++LENM KEYM R +A++QS       QA +MRN E 
Sbjct: 184 IPPPQQRY--NQRTQTPPVQNNNSNLENMMKEYMARTDAVIQS-------QAASMRNFET 243

Query: 61  QVGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYD 105
           Q+GQLAN+LK RPQGSF  HTE+PKR+GKEQCKAVTLRSGL+YD
Sbjct: 244 QLGQLANELKNRPQGSFPXHTELPKREGKEQCKAVTLRSGLAYD 278

[Close]

BLAST of Moc03g20080 vs. ExPASy TrEMBL
Match: A0A6J1E110 (uncharacterized protein LOC111025424 OS=Momordica charantia OX=3673 GN=LOC111025424 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.7e-23
Identity = 64/103 (62.14%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 2   PPPPQQYNQNQRILPQPAQNNNTSLENMFKEYMVRNNALMQSQNATIKTQAVAMRNLEVQ 61
           PPP Q Y  NQR    P QNNN++LEN  KEYM R +A++QS       QA +MRN E Q
Sbjct: 95  PPPQQXY--NQRXQTPPVQNNNSNLENXMKEYMARTDAVIQS-------QAASMRNFETQ 154

Query: 62  VGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYD 105
           +G LAN LK RPQGSF GHTE+PK +GKE CKAVTLRSGL YD
Sbjct: 155 LGXLANXLKNRPQGSFXGHTELPKXEGKEXCKAVTLRSGLXYD 188

[Close]

BLAST of Moc03g20080 vs. ExPASy TrEMBL
Match: A0A6J1DTH7 (uncharacterized protein LOC111022971 OS=Momordica charantia OX=3673 GN=LOC111022971 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.1e-16
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0


Query: 55  MRNLEVQVGQLANDLKARPQGSFLGHTEVPKRDGKEQCKAVTLRSGLSYD 105
           MRNLEVQ+GQL+NDLKARPQGSF  HTEVPKRDGKEQCKAVTLRSGLSY+
Sbjct: 1   MRNLEVQIGQLSNDLKARPQGSFPWHTEVPKRDGKEQCKAVTLRSGLSYE 50

The following BLAST results are available for this feature:

BLAST of Moc03g20080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150317.1	1.9e-40	84.11	uncharacterized protein LOC111018514 [Momordica charantia]	[more]
XP_022158408.1	2.3e-25	63.81	uncharacterized protein LOC111024897, partial [Momordica charantia]	[more]
XP_022159345.1	3.0e-25	64.42	uncharacterized protein LOC111025764 [Momordica charantia]	[more]
XP_022158979.1	2.4e-22	61.17	uncharacterized protein LOC111025424 [Momordica charantia]	[more]
XP_024027611.1	3.3e-16	53.92	uncharacterized protein LOC112093437 [Morus notabilis]	[more]

BLAST of Moc03g20080 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g20080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAE9	9.3e-41	84.11	uncharacterized protein LOC111018514 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DW02	1.1e-25	63.81	uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DYG0	1.4e-25	64.42	uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1E110	6.7e-23	62.14	uncharacterized protein LOC111025424 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DTH7	2.1e-16	90.00	uncharacterized protein LOC111022971 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Moc03g20080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g20080.1	Moc03g20080.1	mRNA