Moc03g19380 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g19380
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr3: 13047465 .. 13047818 (+)
RNA-Seq Expression	Moc03g19380
Synteny	Moc03g19380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAGCCAGCAAACTCTGCAAATACGACGGAACGGAGAGGTCTGAATGGTAACAATGGCACTCAACTCGAACTCGATGCCAAAACAGTTGAGGACCAGGTCCGAGCAGGGCAAGAGGTAGATCTACCACGAAGATCTACTCACCACACAAATCAGGAACTACCTCCTCCTCATCCAAGACCCGTTAAGACCAACCGAGGTCGAGGTGAGACCTCAAGAAAGACCCTCCGAAGGGCAGCCCTAGTTGCGGATCTTGAAGTTCTGGCTACCCTCCAACGGGAGTTGGATGACATGCGCATTCGAGTGTGCACCATGGAGGAAATGTATACCGAGATGACGCGGGCCAACTGA

mRNA sequence

ATGGTGCAGCCAGCAAACTCTGCAAATACGACGGAACGGAGAGGTCTGAATGGTAACAATGGCACTCAACTCGAACTCGATGCCAAAACAGTTGAGGACCAGGTCCGAGCAGGGCAAGAGGTAGATCTACCACGAAGATCTACTCACCACACAAATCAGGAACTACCTCCTCCTCATCCAAGACCCGTTAAGACCAACCGAGGTCGAGGTGAGACCTCAAGAAAGACCCTCCGAAGGGCAGCCCTAGTTGCGGATCTTGAAGTTCTGGCTACCCTCCAACGGGAGTTGGATGACATGCGCATTCGAGTGTGCACCATGGAGGAAATGTATACCGAGATGACGCGGGCCAACTGA

Coding sequence (CDS)

ATGGTGCAGCCAGCAAACTCTGCAAATACGACGGAACGGAGAGGTCTGAATGGTAACAATGGCACTCAACTCGAACTCGATGCCAAAACAGTTGAGGACCAGGTCCGAGCAGGGCAAGAGGTAGATCTACCACGAAGATCTACTCACCACACAAATCAGGAACTACCTCCTCCTCATCCAAGACCCGTTAAGACCAACCGAGGTCGAGGTGAGACCTCAAGAAAGACCCTCCGAAGGGCAGCCCTAGTTGCGGATCTTGAAGTTCTGGCTACCCTCCAACGGGAGTTGGATGACATGCGCATTCGAGTGTGCACCATGGAGGAAATGTATACCGAGATGACGCGGGCCAACTGA

Protein sequence

MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQVRAGQEVDLPRRSTHHTNQELPPPHPRPVKTNRGRGETSRKTLRRAALVADLEVLATLQRELDDMRIRVCTMEEMYTEMTRAN

Homology

[Close]

BLAST of Moc03g19380 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 92.4 bits (228), Expect = 2.7e-15
Identity = 48/70 (68.57%), Postives = 51/70 (72.86%), Query Frame = 0


Query: 1  MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQVRAGQEVDLPRRSTHHTNQELPPPHP 60
          MVQP  SANT ERR LNGNN  Q ELDAK  E+Q +AGQEVD PRRST + N  LPP HP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 RPVKTNRGRG 71
          R  K NRGRG
Sbjct: 61 RSGKANRGRG 70

[Close]

BLAST of Moc03g19380 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-14
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 1   MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQVRAGQEVDLPRRSTHHTNQELPPPHP 60
           MVQP +S NT +RR L  N+G Q E+ A+ VE Q+  G   +   RS   T  +L P HP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  RPVKTNRGRGETSRKTLRRAALVADLEVLATLQRELDDMRIRVCTMEEMYTEMTRA 117
           +P K NRGRG  SR+T   AA     E    LQ+E++ MR ++ TMEEMY EM +A
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQA 116

[Close]

BLAST of Moc03g19380 vs. NCBI nr
Match: XP_022142768.1 (uncharacterized protein LOC111012806 [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-05
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 1  MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQVR 37
          MVQPANSANTTERRGLN +NG Q +LDA+TVEDQ+R
Sbjct: 1  MVQPANSANTTERRGLNADNGPQRDLDARTVEDQLR 36

[Close]

BLAST of Moc03g19380 vs. NCBI nr
Match: XP_022150385.1 (uncharacterized protein LOC111018561 [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-04
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 1  MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQ-VRAGQE-VDLPRRSTHHTNQEL 56
          MVQPA SANTTERRGLN +NG Q +LDA+ VEDQ  RA +E  D P  S   +N +L
Sbjct: 1  MVQPAKSANTTERRGLNADNGPQRDLDARMVEDQKKRASREPEDSPSYSREFSNSDL 57

[Close]

BLAST of Moc03g19380 vs. NCBI nr
Match: XP_022148920.1 (uncharacterized protein LOC111017470 [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 6.3e-04
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 1  MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQ---VRAGQE 41
          MV PANSANTTERRG+N +NGTQ +LD + VEDQ   V+ G+E
Sbjct: 1  MVHPANSANTTERRGVNADNGTQRDLDTRMVEDQTLTVKLGEE 43

[Close]

BLAST of Moc03g19380 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.3e-15
Identity = 48/70 (68.57%), Postives = 51/70 (72.86%), Query Frame = 0


Query: 1  MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQVRAGQEVDLPRRSTHHTNQELPPPHP 60
          MVQP  SANT ERR LNGNN  Q ELDAK  E+Q +AGQEVD PRRST + N  LPP HP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 RPVKTNRGRG 71
          R  K NRGRG
Sbjct: 61 RSGKANRGRG 70

[Close]

BLAST of Moc03g19380 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.5e-15
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 1   MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQVRAGQEVDLPRRSTHHTNQELPPPHP 60
           MVQP +S NT +RR L  N+G Q E+ A+ VE Q+  G   +   RS   T  +L P HP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  RPVKTNRGRGETSRKTLRRAALVADLEVLATLQRELDDMRIRVCTMEEMYTEMTRA 117
           +P K NRGRG  SR+T   AA     E    LQ+E++ MR ++ TMEEMY EM +A
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQA 116

[Close]

BLAST of Moc03g19380 vs. ExPASy TrEMBL
Match: A0A6J1CP40 (uncharacterized protein LOC111012806 OS=Momordica charantia OX=3673 GN=LOC111012806 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.5e-06
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 1  MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQVR 37
          MVQPANSANTTERRGLN +NG Q +LDA+TVEDQ+R
Sbjct: 1  MVQPANSANTTERRGLNADNGPQRDLDARTVEDQLR 36

[Close]

BLAST of Moc03g19380 vs. ExPASy TrEMBL
Match: A0A6J1D8C0 (uncharacterized protein LOC111018561 OS=Momordica charantia OX=3673 GN=LOC111018561 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 1  MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQ-VRAGQE-VDLPRRSTHHTNQEL 56
          MVQPA SANTTERRGLN +NG Q +LDA+ VEDQ  RA +E  D P  S   +N +L
Sbjct: 1  MVQPAKSANTTERRGLNADNGPQRDLDARMVEDQKKRASREPEDSPSYSREFSNSDL 57

[Close]

BLAST of Moc03g19380 vs. ExPASy TrEMBL
Match: A0A6J1D4A4 (uncharacterized protein LOC111017470 OS=Momordica charantia OX=3673 GN=LOC111017470 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-04
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 1  MVQPANSANTTERRGLNGNNGTQLELDAKTVEDQ---VRAGQE 41
          MV PANSANTTERRG+N +NGTQ +LD + VEDQ   V+ G+E
Sbjct: 1  MVHPANSANTTERRGVNADNGTQRDLDTRMVEDQTLTVKLGEE 43

The following BLAST results are available for this feature:

BLAST of Moc03g19380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156638.1	2.7e-15	68.57	uncharacterized protein LOC111023488 [Momordica charantia]	[more]
XP_022159327.1	1.8e-14	45.69	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022142768.1	1.1e-05	80.56	uncharacterized protein LOC111012806 [Momordica charantia]	[more]
XP_022150385.1	2.2e-04	59.65	uncharacterized protein LOC111018561 [Momordica charantia]	[more]
XP_022148920.1	6.3e-04	65.12	uncharacterized protein LOC111017470 [Momordica charantia]	[more]

BLAST of Moc03g19380 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g19380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR60	1.3e-15	68.57	uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DZJ1	8.5e-15	45.69	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CP40	5.5e-06	80.56	uncharacterized protein LOC111012806 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1D8C0	1.0e-04	59.65	uncharacterized protein LOC111018561 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1D4A4	3.0e-04	65.12	uncharacterized protein LOC111017470 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Moc03g19380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g19380.1	Moc03g19380.1	mRNA