Moc03g18490 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc03g18490
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrotran_gag_3 domain-containing protein
Location	chr3: 12219916 .. 12233375 (+)
RNA-Seq Expression	Moc03g18490
Synteny	Moc03g18490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAAGAGAAGGAAGCAAGGCTTGATGAATTTGGTGGAGAAGTTGCTGGAATTTATAGCTGTGCAGAATTGGTTAGGTAGGTCCTAAAACGATGGTGAATCACCCATTTCCAACTCTTTTGACTGACCAAATCCTGCTCAAACTGATAGTGGAACACTTCTTCTACACGTATGCATCGGTTGGAACCACCAAAACGCATTGGAAGACGCGTTTCATTAAGGGCAAAGTTGGAAGAAAAACTGTTTTTCTGCAGGCACGCAGGCGCCTGGCGCCTCCCATGAAGGTTTTTCCGTCTTTTTGCTTCTTTTGATTAATTTGCACTCCCAAATGGTCCTAAAATGTCATAAATACAATATAAGCCATCCACAAACCATAGTATATGAATTTTGCATGAATTGGAACTCAAACGATCGAGAAAAATCCGAAACAAAGCTGAAACATAGTAAAAACAGCATCTAAAACCTTCTTTTTACGCATGTAAACAAGCGTAATCATTTTACATCAATCATGTTGAGGGTCAAGTAACCGATTTCACTATTGAATGAAGCTGATCCAATTACAACAGGTCTCTCCTATTCCTTTGTCCATTCGAGTTTGATTTTCCCAGCACGCTCGACAACTCTTGTTAAGAACTCACCACAAGTTTTCGCACGACCTCGCATGAGTCCGACAATGATTTCATCACCTTCACTGTCTGATGATATTATGATTGCAAAGATAAAACAAGAAACAAAACAAATTATTAGGATTAGTATGAATCATAAATTATAAGCATACAAAAAATATAATATACCATAGCAGAGTACTCGTCAATATCAGAGCCATCGATTTCATTTGACGATGTTGTATCTTCATATTCATCGTCATACTCATCCTCAATTTCGTTTTCAACTTCATCAAAATCTAATATTATCTCAAACGTACCGTTATTGTCGGATATTACACTTGGGTCTACATTTGCTCTATGAAATGTCTGTGTTTCTAGATCCACTTCATCCACTACACATTGATTGATATTGACTTCACATAAATCAATCTCTTCTACATCAAGCACATCCCATAAACATCTATGTTGAATTCTCTGAGCTACTTTTTATCCATTACCTAATTGGAGATCATCGACATAAAATACTTGTTGTGCTTGAGAAACAAGTATAAATGGGTCATCCTTATACCATAGGTTAAGCGTGTCTATGCTTCTAAAATTATTATCCTTACGAACATAATTCTTCTTAGGATTTGTGTCATACCAATCACACCTAAATAGACGAACTCGTTTCTCTTTAATGTACTTCAATTCAATCACTTCCGTAATAATACCGTAGAAGTCAGATCTTTCATTATCATCTCCACCAAATACACACACTCCACAATTTGGAGTAGTGCAATGACTATCCCGCTCAATTGTGTTAAATCAAACCCCATTAGAAACACATCCATGATACGAGTTTACTCGACGTTCTGGGCCACAGGCTAGCGTATACAATTCATGAACAACTTCATTTGATGCTGAACAAACTTGAGATTGCATCTGAAGAAAAATTTTTAAAGAAACAATTGGTGAATATAATTTCATCAAATCAGGTTTCAATTATAATCCAGAGAACTCACTTTTCTTTTGAACCATTTCGGGAATAAGATCTAGTGAAGTCTGGTGAGATTACCACTATTTCCATGTTAAAGCTTCATTTCGTGCTCTCTACCCAATGATTTGAACAATTAATAGATTTTTTAAGTAAGAATAATTGTGTAAATGTATAAAAGATCATACTGTCTGTATTCATCAACTGCTTCGCAATTACTTAAGACATACCAATAATCTTTTTGTAACTCAGTATGCGATAATTGTTTCATTCTTGAACCACCAATTGGACGTGTATTTTGTGAAAACATAGACAAACATCTATTAGAGTTATTCAAATCTCGCAGATCATCATTCCGAACTGGCCTATTGAACTTTATTTCAATTTCATTTAGGTACATCGAACAAAATGTTAACGATTCATTCGCAATGAATGCTTCTGCTATCGATCCTTGAGGTCGCACTTTATTTCATACCTATTTTTTCAATGTCATCAATCTCCTGTGAATTAGAATTATTATGACCATGTCAATAAATATATTAAAAACTAGACATCAGAATGCTAAACATATCGTACCTCTCTATTGGATACATCCAGCTATAACCGACAGGTCCAACAAGTTTAGCTTCTTCTAGTAAGTGGACAGCTAGATGGATCATGACATCAAAGAAGGCTGGAGGGAATATTCTCTCGAACTTACATAAAATCAATACGATTGCTTCTTGTAGCTTATTCAAAGTCTCAACTTTTAAAGTCTTCGCTGTCAAATTTTTGAAGAAATCCAACAATTCTGAAATTGCAAACCTCACATCTTTGGGCAAAAAGGGCCAAAACCCCACTAGTAAAAGTCTTTGCAACAAGACATGTGAGTCATGACTTTTGAGTCCATATATCTGGCCATATTTACCACTAACAAATCTCGATATGTTTGATGCAAAACTATCGGAAAATTTCACTGTTTTCAAGAAGCTACAAAATTTATTTCTTTCATTTATTGTTAGAGTGGAGCTTGCATGTGGCTTCACCCATTTGTTCCCGACTTGTAGAAGATGCAGCTCTTTACGGATGTTCAACCTCATCAAATCTCTACGTGCTTTGTCAGTGTCCTTTGTTTTCCCATCGATGTTTAACAGCGTGCCCATTACATTATTACAAATATTTTTCTCAATATGCATAACATCAAGTTTGTGTGGAATCTTAACATTAGACCGATATGGTAACTCAAAAAATATACTTTTGTTCACCCAATTTACTTTATCATGCAATCACTTTCTTTTCCATTGTTAGATGTTTACAATTTTACCAAGTGGTGGAAAGTCTATTGATTCTAATTGGTGAATGACATCAATTCCAGAAAAATAACGTGGTGCACGTCTACGTGCTGCTTCTCCATTGTATTGTTTACGCTTACGCCAAGGATGATCTTTATGCAAGAATCCACGATGCCCCATGTAACATATTTTACCATGCAATGGATCATATGTAATATCTTCATTACAAACTATACATGCTTTGTATCATTTCGTACTTCATCCCGACAAATTGTCATATGCTGGGAAGTCATTGATTGTCCACATCAAAGTAGCATGGAGTCGAAAGTTCTGACCACTATAGGCATCATATGTCTCAAAGCCAATACTCCACAAATCTTTCAACTCATCGATCAAAGGTTGTAAGTAAATATCAATATCCTTTCCTGGAGCCTTTGGCCCTGGTATGAGTAAGGACATGAAGATATATGTTTTTTTCATACATTTCCAAGGTGGCAAGTTGTATGAAATTAACATTACATGCGACGTGCTGTAAGTCGTACCCATGATGCCATATGGATTGAATCTTTCAGTAGCCAATGCTAATCTTACATTTCTTAGATCTTCTACAAACCACGCATACTATTTATCAAAATGTTTTCATGTTTTTGCATCTGCTGGATATCTTAAAACTCCTTCTATGTTCTTCCTCTTCTCCTTATGTCATCTCATGTCTCTAGCTATATGTTTTGACTGAAATAATCTTTCCAATCTCGGCTTCAATGGGAAATGTCTAAGTATTTTTTGCCGAATTTTTTTTCCTTTACTGTTTTTTGTTTTGTAACGAGATTCATTGCATTGCAGACATCTATCTACTTGTGCATTTTCTTTCCGAAATAGCATACAGTCATTCTTGCAAGCATGTATACTTTCATATCCTAAACTTAAATCGCGCAACATCTTTTTTGCACCATAAGAAGATTCTGGAATTTTAGAACCATTTGGAAGAGCTCCTTAAGTAGTTGCAATAACATATCAAATGACTTATTACTCCAATGATTAAGTACTTTAATATGCATTAACTTAACAAGTGAGAGAGTAGAAAGGGTGACGGCGGCAGCACGTGAAGCCAAATCGAAGGAGGGCAGTGAAGCAACGGCAACCGACGGTGGAGAGAGTAGAGGGAGAGGGTCGCGAACAAAAAGAGAGCAAGGAGATGCGATGGTGAGAAATTAGAAATTAGGGATTTCGTATTAAGGGTTGTGCGACAAAAGTAACTTAAATATGCGACGAAATCACTTTGTGTTGCATAAATACGCGACAAAAGAAACTTTCGTCGCATAAATATACGACGTAAGTTACTTTCATCGCATTTTTTAGCGACGAAATTGCTTTGCGTCACATATTATGCGACGAAAGCTGTTTTCGTCACGTTCTTTGCGATTGATTTTTTCCATCGCAGAAACATATATTTCTTGTAGTTTATAGGTTTGGAAGGAATAGAAAGCGTCGATGACCCGAAGGTCGAATGTCTTGGTGGGATTAAAGATCCTAGTATTTGAAATCTATAGGATGTTAGCAATCTATATGATGTTAGCGTTAGAATATCTTGTTGGGGAGATTTTGCTTCTTTATTTTTTTCCACTTTTGTTAATCAGGACGACTTGGTACTTCCATCTATAGACTGAATTTTGCAATCAAAGCATTATAGAATTGCTATCCAGCCGACAAAAATTTGTCAAGAAACTAAATGCTTGACATTTTTTTGTAAAACATGAACATAGTTGACACGTATTAAAAAAACATCTTTCGATAAGATCACTTTGAAATGTGTTTAAAAAACATATCAACTTTTGATAAGGTACTTTAAAATTTGTTTATCCATAAAAAAATTGATAAAATTTATTTCTTGATTATTGTAGAATAATTTCTTTTAGCACCTAACCAAATGCCTAGAATATAGTGTTGGAAAATTTAAACAAGTCCTAATTCATGATTATTCTAAAATAAAAGCCATAAAATTCTTGAACAATCAAGACCAAGAATCTAAGTATGGAAGAAAACCAAAATCTATAAAGAGATTAGAATTACCTGAAACCATTAGATAGATTGACCATAATCTGCAAGAAGTTGTGGTTTGTGGTCTTCCTCAACTATGCAACCCAGACCAAATATGTGCAATACTCTCTTGTTTAATAGGGAACAGGAGGCTCAAGAAGCATAGTGTATTGGGGACCATAATCCTATATTTATAGGTTAATCCTAGGGTTTTCCATAATCCCCTAAAATTAATATGTTGGTTTCTACTTAGCAAGTCACACCACTCAATGGGAAGTCATGGGCCCATAATCAACATCACTCATATGCACATTAAATAACCCAAATATAATTGCTCTTTAATTTGTTACCCACATATAAATTAACTATTAAATTAATTCCAAGATATATCTCACTAATTATCCTTGACCATCTATTGATTGTTTAGGAATGTCTCACTATTAAAAATTAGGGAGGTCTATTTCTACTCTCAATAATGCATGAGGATTGACAAATATGGGAGGCTTTTAACTAGGCCTTTGATGGTTTGAATAATGAATATATGCTCATGAGACCTTGGAGGTTCTTGCTCCCGATCTTGATTGTCTAAGTGGATCTCCTATTATATATCCGATCGGCATGATTTTTCTAAGTTTTTGACATAAGGATTCATAAGTTTGTCATAAGTTTGGAATAAAATTAGAAATATAATTGAGACCTCATAAATCAAGTTTTATTAAGAATTTCATTGAGAAATCTATTATCAAACTCTATAGATTTTTTGCAAATTGAGGAATTTGGAATATTTGGAGGAAGTTATGGAAGAAAGTCAAGACAACTATGGAAGAGAACTACTTGCTCTTGTTCAATAATAGAATACTAGATGGAAATATGTGAATAATGGAGGAATGAAAATTTGAGACCACGAAAGATCGTGATGTAAATGCATGGTGGTATTGGAATTTGATATAATGAAGGGTGGTAAGAAGGCATTGAAACTTGAATTCAATAGAGACTCTTTACTATTTAAGTAATGGATAAAAGAAAGTGGAAAAATTTAACTTACTTGAAGCAAGAAGATAAAATTTTGGGAAAGGATAATTTTATTCAAAACTTCAGCACTTTCCCTTTGCAAAATTTTTGTCGTCATCATAATCGTCTCGACTGTTACTTGATTCATAAGAAAATTGTTGAACTATTTCTGCAAGTTCTTGTTCATTTGCAGCCTGTGACAGCATTGCTACAATCAGTCTTGACTCTAGTTGAGGAATCGTTGATTTTGTTGAATGTTTGGCTTGTGGATAAACAGAGGGTGACCATTGAATTGAATTTTTCCATCATTTGATTTTGTAAGTTCGGTGGAGACGAGATATTATGTTTGCTTCGATGATCGAGTAACCCCAACAGAATATCACAAGCGAGATGAAAATAATTTGAAAATCGTAATAAAATGTTTAATAAAGTTAATGAAAGTACTATTTTAAAAATATTTGAAACTTTAACAAATTGAGAGTGGTAGAATTAAGAGGGGTATAATGGCCTCAGTGAGACCAAAATATTCCATCAATCATTGAATCATAATGGAACACTTTGAATGTTTTCTCAAAAATAATAAAAACAAGAGTGATTGAAATTATTTAACCAGGACATATTATTCTAGGCATTTGGAGAGTCGAGATACGAATATGTTTCGGGAGTAAAAGTATGAGTATTGCTTTTCAGTGTAGATACATTGATTCTATTTTGTAGGAGTTAGGACTACAAGAATTTTGATTTTTGAAAATACAATTTTATTTCGAATGGTTTTATTCGTGGTGTGCGTTAACTAGATAGAATCAGTTTCCTCGAGTATGGAAAAAATGAAAGTTTGAAGAAAAGGTTTTTTGAATTATATTGACAATAGAGGTTTCTAAATGTTTTGGTTGGAGAACCGTAATGAATGAGGTCTAAGGTATCGAAAGATAATTATAAGATAACAGAATTCTTGGAGGTACGATTTATGGGTTATGAGGATTTGTTCCGACAACTACTTGGATGTATGTGGATGTGTATGTTTGTAAAAGGAGGCCGATGGCTCTCCTTTAGTTATAGGTTTTGATGACTCCATATGCAAGACCGAATGCCTTGACAAGATCCCCATATTTGAAATCTCTTTGATGTGGGTGTTGGACCTTATGGTGGAAATTCTTGTTGAAGCAATTTTCCTTCTCTCTTGGGGACGTTGTTTCGCCTTCCAAAAAAAAAAAAAAAATGACGAGCTTTGAGAGCTAGAGACTTTTGTTTGAGATTTTGGCCTCAGATCTTCTTTCTCTTTTTCCTTGCTCTCTCTTTTCTCTCTGTGACTCATTTTTTCTCTTTTTCTACTTTTCCTCAGAGGAATTCTCTTGTTAGGTAATCAGGGAGATGATTTGTGTTTTCTTTTATAGACTCAATTTTGAAATAAAAACATGAACAAATTGCTCGCCACCGAACAAAAATTTGTTGAGAAACTAAAGTTTTGTCAAATTTTGCAAAATATTTGTGGCGGCCTTACAAACGACATGTATAAAAAATATTTGTTGCTAAGGTCACATTGAAATTTGTTTGTGCATAAAACAATTGATAAAAATTATTTATTGACTGTTTGAGAAAGCTATCGTATCCAATATTAGAGGTATCGATTTATGCCTTGACTATTAATGATGCATAAGGATTTACAATTAACAAATATGAAGGCTTGTGACTAAGCTTTGATGGTTTGAATAATGCATCTATGCTCATGAGATCATAGAGGATGATTTTTCTTAAATCGTTGATATAAAAGTTCACAAGTTTATCTTTAAGTTTGGAATAAAAGAATATATGTAATTGAGAAATCTTTGTAATTGTGTTTTATCAGGAATTTCATCCAAAAGTCTATTAACAAATTATATGGACCTTTGAATATGATGTTTGTTTTTCCCTTGACATATGTCATCACCTAAGAATCTCTCTTTTTTTTTTTGGAATAGCTTAATTTTTGGAATAAATACAACTGCAACTGACCCATTTTGTTTGATTATTTGATTAAATATATTTAGGTGTTTGAAATGTTTTTCAATTAATTGTTAAAAAACTAAAACATCATGTTACTGTTGTAAAGTTTTTATATGGATTAAAAATATCATTTATTAAATTTTGGATTTATAAGGGGCATTTCTTAGTCCAAAGGCACTACGTTCCATTCATATCGGTTAAATGGTACATTAAATCGATGTTTTATATTTATCTTTTTCAGCAAATTGAATTTACCTAAATTCTGACTTCATGTCAAATTTGGATAACACTGAATCATTATGAATTTGATTAATAAGATCTGTTTTTTTTATTTGGGATAGGATAATTAATCTTTTCTAAGACTAAGACTACAATTATTTTATTCTAAACTTAATACAAACTTGTGAATCAGGCTTAACAAAAATCCTCCTTCATGGTCTCGTGAGCATACATGCATTATTCAAACCATCCAAAACTTAGTAAAAAGCATTTCATGTCTTAAATCCTCACGCGTCATTAATGGTTGAAACTGATGCCTCTGATATATGATATGGTAGCTTTCTCAAACGGTCAATAATTGATCAAAAACAAATAGTAACCAAAAACAATTAGTAAGGTGGCATCCACATTTGGATGAGTGCACAAAGAAACTATTCCACGGTAAAAAAGGAAATGTTATAAATTATTTTATGCACCCGCAGATTTAAAAGTGAACTTACCAACAAAAGTCTTTTAATATGTGTCAATTGTTAGGGCAGCCACATATGTTTTTGCAAAAGGATCTCAAAAATCTCGACAAAATTTTGCCTAGTGGTAAGTAATTCTTTCATGTTTTGATTTCAAAATTGAGTCTATTATAAAAGGAAGTACAAATTCTCTTCCTGATTAACTAACAAAAGCGATTCCTCCAAAGAGCAGTACAAAAAGAGAAAATTATTTTTAAAAAGAGAAAATGAGAGAGCTTAGAAAAAAAGAAAAATAAAGAAGATATGAGGCCAAAACCTCATATAAAGGCCTCTTACTGTCAAGCTTATCATTTATTTCAAGGCGAAACATCATCTCCAAGGAGAGAAGAAAAATCGCCTCAACAAGGATCTCCTCGACAAGGTACACCAATACCCTCGTCAAATAAATTTCAAATATTGGGATCTTTAATCCCCCAAGGCATTCGAACTTCCATATTGAGGTATGAATCCCTTTTATCCCTGCAAAACTTATAACTATAGGAGAGTCATCGACCTCCTCTTTCAAAAACCTACATCATCCAAATACATCCAAGCAGTTGCTAGTATTAGGTTAATTGTTATAACCTCCTCTAGTTACCATTCTCCTCTAAATTAGCTTACTTATTCAATATTATTTGTAAATTAATTATACTTAGGCTCTATAAAAGGGCTCCTTGTATTCACTTTAAAATCATCTCAATTCATAAATTGTTTTATCTTCATCCCTCTTTTCAGTTCTATTATGGTATCAAAGCCCATTGACACACGTCACTAGGTTCCTTTTTATTTTTTTTTCTATCTCCACAAATCCACCATGAGTGATACTTCCTCTGCTTTTTCTTCCTTCATGAATGCATCTACCATTTCTTCTCCATTGTTTCGTCTTTCGTACATTTGCAATCTCATATCCGTTCAACTTGATTCTACAAATTATGTGCTATGGCGTTTTAGGTGTCCTCAATTCTGCGAGCACATTCCTTTTTTGGCAATGTTAACAGTTCTTCTCCTTCTGTGGAACAGTTTGTTCGATCTGCCACTGGTATAGTAACCACCAAAGTCAATACCCCATTCCTTCAATCGAGTTCTCGTGATCAAGGTCTTATCACACTAATTAACGCTACAGTTTCACCCTCTACCTTAGCACATGTTGTCGATTCCACATCGGCGAAAGAATTATGGTTGTCCCTTGAAAAGAAGTATTCTTCTAAATCTCGTTTCAGTATCCTCGAATTACACTTAGCCCTATATACGGTAAAAGGTCCTCTACTAAGTCTGTCGAGCAATATATTCGTTGGATTAAAGATATTGTTGATCGTCTTGCTACTGCATATGTTCAAATAGATGATGAGGAAATTCTTGTTCACATTCTTAATGGTCTAACTTCAAACTTTAATGCCTTCCGTACTTCTATTAGAACACTAAATGACACTGTTTGTGTAGAGGAACTTTCTGTTTTGCTTGAGGTAGAGGAGAAAGCATTGGTGGCACATTCTTCTTCAATTGATCTTGTACCAATTGCAATGGTATCTACCAAGGGCTCTCAATTTCCTATGTAACGCTCCGAGTCCCTCAGGTTAGTTAGTCTTGAATCAGGAGATTTTTCATTTAATTTATAAATTAATTGTTAATTAAATTTATACATATTTATCGGGCTCTAAACTCCAATTAAATTTATATTTACCGGACTTCGTGTAGTGGGTCTTGTTTTAAGATGGAATGGGTTTCTTTTCTCTTGGGCTTGGACTTGTTGGGCCTTTATTGGGTTAAGTTGGTTTTAAAACAAAGGAAAAGAGGAAAAAAAAAGAAAAACAAACTTCATCTTCTTCTTCTCTCCTCCCTTGTTGCCCTAGCCGTCACCCACCCCTCTTCTTCTTCTTGTTCACCGGCAACCACACATTACGGCGGCGACGGAAGCGGCGGCGCCTCCTCGAAACAGCAGCAGCGGCGACCGGCGACCACACCCGTAGCAGCAGCAGCGGCGGCATCTGTAGCAGCAGTAGCGGCGGCGCGACTTCCCTGACGTGCCGGAGATCTACAGCAGCGGCGGCGCGTTCCCCAGCGGTCTGCAACGAACCAGCACCGCTCCCTGCAGCATTCCTCGCGGCGGCGCACGGCGACGGGTCAGATCCGCGGCGAAGCACGGCGAACGGGTCAGATCCGCGACGAACCTCGACGACCTGCTACTACGATCCGACGAACAGTAACTCCAGCGGCGGGATTTGTGCGTTACAGCAGCGTTTAGGACGTTTGGCGGTGACCCACATCCGTTCGAAGCTCGATTTAGGCTACCCACACCTTGGCGAGCTAGATCTAGGTGACCCACACCTACACGAAGTCGGTTTTGGTGGTAATGAGTCATTTGAACCCTTTTAGAATTGATTTCGATGGCTAAATAGTGTACGTAACTTGCTGTATTTTTCTGTTTTAGTGCTTAGGTTTGAGATCGACGCAAAACTTAAGGGCGCGGTTGTGAGTAAGTAGACAAGGGGCGTGTGCGTGTGTTAATGTATGTTAAATGGTCTCTAATGTACTGGTTTTGTGGCGTTTAATATTAATTTTGTTACGTCATTGTGCTAAATAACTCTCTTTGTGTTAATCTGTATACTTGGAGTAGTGTTAGATATATGTCGGTGAAAATGGTGAGGTTTCTGCTTTGCTAAACTGCTGGGTATTGCTGTGGAAATGTTTGTTATCTGAATATGCATGAGTTGTTCGGTGTGTCTTGTGTGTTATTATACTTAGTAATGCCTATTGAATATTGATGCTGGATATTAAGTGTTTTGGGTGAACCGTGTCGGACTCCAATGGTTTAAAACTTGTTTGGTTATGCATTGTTGCGACGAAACTCATTGTGGAGCCGTTGTTAAGAAAAGTTATATTGAGAGAGCATGATTGGTTTATTATTTCATTATTAGAATGTTGTTTATGTTGTGGAAGCATGTTGAATTGTATTTGTGAACTGAAAGATGCAGGGGTAATGACTTAAGAAAGTATATAGTAAGACTCTGGTGAGAGTTGGATTCTTGAAGGAAATGAATGAGTGAGTGTCAGGGCCTCGGGTATAAATGGTCGGGGGCTGATACGTCACTAATTGAGTATCGAGGCCTCGGGTAAAAATGGTCGAGGGTCGATACGAGGAGTCCTTTGGAAGGAAGGCTACTGGGGCCTTGGGTAAAAATGGTCAAGGGCCAATAGATGGTGAAGTCATCGGGGCCTCGGGTAAAAATGGTCGACGGCCGATGCAGTAGTGTCGGGGCTCTGGGTAAAAATGGTCAGGGGCCGACTCTACTCGAAGGAGTTAACTGTGGAAGGCTGAGATAGCTGTGATAAGCGTAGAGGTACTTGAGATGTTAGGGAGACTAGAGGTTGGTAGTTAATGTGTTCCTAGTTGTGGTTGTCACCAAATTTTATAGAATGTGTCTATGTTTGAATGCATAATGTGATGAAAGGCATGACTATGAATGTTTCATGATTTAGTTGAGCATGATGTGTGTGTTGTTGGCGAGGGCTACTTACGGAGTATATTTTATATATTCACCCCCCCTCTACAATTATTGTTTCAGGTGAAGGACTCGTAGGCGACCATGGTGATGAGATGGAGGAGACATGACGAGCGAGAACCATAGGCTGCTTAGTCACTCTTGCTTAGCTTAAGTTATTAGTTAAGACCTTATGTTATGGTCAATAAACTATTTGTTCGTGTTTGAATAATTGAGAGGTTCCCACTTGTTATTAATTTTATTTTAGGATAGGTGTCTATCTTAGTTTTCTACCATTCATTGAGTTTTGCCTAGTTTGAATAAAAAAAAATTGCCCCATGAGGTTGTCCACGGATGTTGTTGATTGATATTCTATGAAATTGATTTATTGTTGAATTGACCAGAGGTGGAACTTGATTTTATATAATTGTTGCATAGGGAGTTGGCATCACATGTTTGGGGTTAAGTTTAATATGTTGGGTAGTTAACGTGACCTAGAAGTGTGGGGGAAATTCTGGGTCGTTACATCCTAATTCTTGAAATTTCGATCATAAAAGCAGTGGCAATCGTGGTAATTTTGGCAAAGGCAATCGTGGCAATAATGGTGGCGGCAATTTTAGCAAGATAGTGGTGGTGGCTTTCCACAAAATGCTCTTCCTCATTTCAACAGCGGTCCTCATGGACCTCGTCCTCCAAATGAGCGTGGATCCCATTCAAATGGTCAACTTTCTAATTTTGGTTGCAGCAATAATTCCTCCAATATCTCTAGAGGTGGTTGCATGTACTGTCAAATTTGTCTAAAACCAGGGCATGGGGCTCTCGATTGCTACAAGCGAATGAACTTTGCATTTTAGGGTCGCCACCCTCCCGCTCAACTTGCGGCCATGGCTGTAAATGCAATGACCCCTTCTTCATCCTTTAATACTCACAATAATTTTTGGTTGTCATATAGTGGCTACAACGCACATGTGACCAATGATTTAGCCAATTTGAATCTAGTTGATTCTTACAATGGAGACGAATCAGTCATCGTCGGCAATGAGCAACCTTTAAACATTATACACACAGGCGGTGGTATACTTTCTACATCCTCGCACGCATTTACCCTTTCCAATGTGCTCCATGCTCCTGATTTAGCCTCAAATCATCTTTCAGTTCATAAAATTTTGTGTTGATAATCATTGCATTTTTGTATTTGACTTTGACTAGCTCCTCATCCAGGATAAGGTTACTGGCAATACTCTCTATAAAAGAAAGAGTGTTAATGGACTCTACCACATCCCTAGTTCGTCTACTTTGTTGTTAGCCCGCAATGAGTTACATCCCAAAAACTATGGTCTTCTTGCAAAAACAGAGTCTTATCTCTAG

mRNA sequence

ATGATCAAGAGAAGGAAGCAAGGCTTGATGAATTTGGTGGAGAAGTTGCTGGAATTTATAGCTGTGCAGAATTGGTTAGTGGAACACTTCTTCTACACGTATGCATCGGTTGGAACCACCAAAACGCATTGGAAGACGCGTTTCATTAAGGGCAAAGTTGGAAGAAAAACTGTTTTTCTGCAGGCACGCAGGCGCCTGGCGCCTCCCATGAAGCCTGTGACAGCATTGCTACAATCAGTCTTGACTCTAGTTGAGGAATCGTTGATTTTGTTGAATGTTTGGCTTGTGGATAAACAGAGGGCGAAACATCATCTCCAAGGAGAGAAGAAAAATCGCCTCAACAAGGATCTCCTCGACAAGGTGTCCTCAATTCTGCGAGCACATTCCTTTTTTGGCAATGTTAACAGTTCTTCTCCTTCTGTGGAACAGTTTGTTCGATCTGCCACTGGTATAGTAACCACCAAAGTCAATACCCCATTCCTTCAATCGAGTTCTCGTGATCAAGGTCTTATCACACTAATTAACGCTACAGTTTCACCCTCTACCTTAGCACATGTTGTCGATTCCACATCGGCGAAAGAATTATGGTTGTCCCTTGAAAAGAAGTATTCTTCTAAATCTCGTTTCAGTATCCTCGAATTACACTTAGCCCTATATACGGTAAAAGATGATGAGGAAATTCTTGTTCACATTCTTAATGGTCTAACTTCAAACTTTAATGCCTTCCGTACTTCTATTAGAACACTAAATGACACTGTTTGTGTAGAGGAACTTTCTGTTTTGCTTGAGGTAGAGGAGAAAGCATTGGTGGCACATTCTTCTTCAATTGATCTTGTACCAATTGCAATGGTATCTACCAAGGGCTCTCAATTTCCTATATCTACAGCAGCGGCGGCGCGTTCCCCAGCGGTCTGCAACGAACCAGCACCGCTCCCTGCAGCATTCCTCGCGGCGGCGCACGGCGACGGGTCAGATCCGCGGCGAAGCACGGCGAACGGGTCAGATCCGCGACGAACCTCGACGACCTGCTACTACGATCCGACGAACAGTAACTCCAGCGGCGGGATTTGTGCGTTACAGCAGCGTTTAGGACGTTTGGCGGTGACCCACATCCGTTCGAAGCTCGATTTAGGCTACCCACACCTTGGCGAGCTAGATCTAGTGCTTAGGTTTGAGATCGACGCAAAACTTAAGGGCGCGGTTGTGAGCAATCGTGGCAATAATGGTGGCGGCAATTTTAGCAAGATAGTGGTGGTGGCTTTCCACAAAATGCTCTTCCTCATTTCAACAGCGGTCCTCATGGACCTCGTCCTCCAAATGAGCGTGGATCCCATTCAAATGGTCAACTTTCTAATTTTGGTTGCAGCAATAATTCCTCCAATATCTCTAGAGGGTCGCCACCCTCCCGCTCAACTTGCGGCCATGGCTGTAAATGCAATGACCCCTTCTTCATCCTTTAATACTCACAATAATTTTTGGTTGTCATATAGTGGCTACAACGCACATGTGACCAATGATTTAGCCAATTTGAATCTAGTTGATTCTTACAATGGAGACGAATCAGTCATCGTCGGCAATGAGCAACCTTTAAACATTATACACACAGGCGGTGGTATACTTTCTACATCCTCGCACGCATTTACCCTTTCCAATGTGCTCCATGCTCCTGATTTAGCCTCAAATCATCTTTCAGATAAGGTTACTGGCAATACTCTCTATAAAAGAAAGAGTGTTAATGGACTCTACCACATCCCTAGTTCGTCTACTTTGTTGTTAGCCCGCAATGAGTTACATCCCAAAAACTATGGTCTTCTTGCAAAAACAGAGTCTTATCTCTAG

Coding sequence (CDS)

ATGATCAAGAGAAGGAAGCAAGGCTTGATGAATTTGGTGGAGAAGTTGCTGGAATTTATAGCTGTGCAGAATTGGTTAGTGGAACACTTCTTCTACACGTATGCATCGGTTGGAACCACCAAAACGCATTGGAAGACGCGTTTCATTAAGGGCAAAGTTGGAAGAAAAACTGTTTTTCTGCAGGCACGCAGGCGCCTGGCGCCTCCCATGAAGCCTGTGACAGCATTGCTACAATCAGTCTTGACTCTAGTTGAGGAATCGTTGATTTTGTTGAATGTTTGGCTTGTGGATAAACAGAGGGCGAAACATCATCTCCAAGGAGAGAAGAAAAATCGCCTCAACAAGGATCTCCTCGACAAGGTGTCCTCAATTCTGCGAGCACATTCCTTTTTTGGCAATGTTAACAGTTCTTCTCCTTCTGTGGAACAGTTTGTTCGATCTGCCACTGGTATAGTAACCACCAAAGTCAATACCCCATTCCTTCAATCGAGTTCTCGTGATCAAGGTCTTATCACACTAATTAACGCTACAGTTTCACCCTCTACCTTAGCACATGTTGTCGATTCCACATCGGCGAAAGAATTATGGTTGTCCCTTGAAAAGAAGTATTCTTCTAAATCTCGTTTCAGTATCCTCGAATTACACTTAGCCCTATATACGGTAAAAGATGATGAGGAAATTCTTGTTCACATTCTTAATGGTCTAACTTCAAACTTTAATGCCTTCCGTACTTCTATTAGAACACTAAATGACACTGTTTGTGTAGAGGAACTTTCTGTTTTGCTTGAGGTAGAGGAGAAAGCATTGGTGGCACATTCTTCTTCAATTGATCTTGTACCAATTGCAATGGTATCTACCAAGGGCTCTCAATTTCCTATATCTACAGCAGCGGCGGCGCGTTCCCCAGCGGTCTGCAACGAACCAGCACCGCTCCCTGCAGCATTCCTCGCGGCGGCGCACGGCGACGGGTCAGATCCGCGGCGAAGCACGGCGAACGGGTCAGATCCGCGACGAACCTCGACGACCTGCTACTACGATCCGACGAACAGTAACTCCAGCGGCGGGATTTGTGCGTTACAGCAGCGTTTAGGACGTTTGGCGGTGACCCACATCCGTTCGAAGCTCGATTTAGGCTACCCACACCTTGGCGAGCTAGATCTAGTGCTTAGGTTTGAGATCGACGCAAAACTTAAGGGCGCGGTTGTGAGCAATCGTGGCAATAATGGTGGCGGCAATTTTAGCAAGATAGTGGTGGTGGCTTTCCACAAAATGCTCTTCCTCATTTCAACAGCGGTCCTCATGGACCTCGTCCTCCAAATGAGCGTGGATCCCATTCAAATGGTCAACTTTCTAATTTTGGTTGCAGCAATAATTCCTCCAATATCTCTAGAGGGTCGCCACCCTCCCGCTCAACTTGCGGCCATGGCTGTAAATGCAATGACCCCTTCTTCATCCTTTAATACTCACAATAATTTTTGGTTGTCATATAGTGGCTACAACGCACATGTGACCAATGATTTAGCCAATTTGAATCTAGTTGATTCTTACAATGGAGACGAATCAGTCATCGTCGGCAATGAGCAACCTTTAAACATTATACACACAGGCGGTGGTATACTTTCTACATCCTCGCACGCATTTACCCTTTCCAATGTGCTCCATGCTCCTGATTTAGCCTCAAATCATCTTTCAGATAAGGTTACTGGCAATACTCTCTATAAAAGAAAGAGTGTTAATGGACTCTACCACATCCCTAGTTCGTCTACTTTGTTGTTAGCCCGCAATGAGTTACATCCCAAAAACTATGGTCTTCTTGCAAAAACAGAGTCTTATCTCTAG

Protein sequence

MIKRRKQGLMNLVEKLLEFIAVQNWLVEHFFYTYASVGTTKTHWKTRFIKGKVGRKTVFLQARRRLAPPMKPVTALLQSVLTLVEESLILLNVWLVDKQRAKHHLQGEKKNRLNKDLLDKVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVSPSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVKDDEEILVHILNGLTSNFNAFRTSIRTLNDTVCVEELSVLLEVEEKALVAHSSSIDLVPIAMVSTKGSQFPISTAAAARSPAVCNEPAPLPAAFLAAAHGDGSDPRRSTANGSDPRRTSTTCYYDPTNSNSSGGICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRFEIDAKLKGAVVSNRGNNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNFLILVAAIIPPISLEGRHPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANLNLVDSYNGDESVIVGNEQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLSDKVTGNTLYKRKSVNGLYHIPSSSTLLLARNELHPKNYGLLAKTESYL

Homology

[Close]

BLAST of Moc03g18490 vs. NCBI nr
Match: KAA0067173.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK26022.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 221.1 bits (562), Expect = 2.7e-53
Identity = 175/458 (38.21%), Postives = 235/458 (51.31%), Query Frame = 0


Query: 120 KVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVS 179
           +VSSIL+AHSFFG+++ + P   + + S+T    +++N  +LQ  SR Q LITLINAT+S
Sbjct: 56  QVSSILKAHSFFGHIDDTLPCPPKHLSSSTLGTNSEINPEYLQWLSRSQALITLINATLS 115

Query: 180 PSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVKDDEEILVHILNGLTSNF 239
            S LAHVV S S+K LWLSLEK    K   + + L        +DEEILVH LNGL  +F
Sbjct: 116 SSALAHVVGSVSSKALWLSLEKPLIDKLVAASISL--------EDEEILVHTLNGLPVSF 175

Query: 240 NAFRTSIRTLNDTVCVEELSVLLEVEEKALVAHSSSIDLVPIAMVSTKGSQFPISTAAAA 299
           NAFRTSIRT +  + +EEL  LL + E+  +A +S+I+ +P AM +   SQ   S     
Sbjct: 176 NAFRTSIRTRSGNISLEELHTLL-ISEETTMAKTSAIEAIPTAMAAFHPSQHHSSRGRGR 235

Query: 300 R-----------SPAVCNEPAPLPAAF--LAAAHGDGSDPRRSTANGSDPRRTSTTCYYD 359
           R           SP   N      +    L + +  G+ P     N ++        ++ 
Sbjct: 236 RFHSTGNPIFNSSPNSSNRGINFASGSRGLESNNNFGTQPNHFQPNYNNHGPFLPPSHFT 295

Query: 360 PTNSNSSGGICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRFEIDAKLKGAVVSNRG 419
           P + N  G I +        + +H  S                 F ++A        N G
Sbjct: 296 PVHPNQRGIIGS--------SPSHGPS-----------------FRLEA--------NSG 355

Query: 420 NNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNFLILVAAIIPPISLEGR 479
            NG     +I     HK                 ++D    +NF           S + R
Sbjct: 356 YNG-----RIFCQICHKQ-------------EHGALDCYNHMNF-----------SYQDR 415

Query: 480 HPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANLNLVDSYNGDESVIVGN 539
           H P+QLAAMAVN+M    S    NNFWLS SGYN H+TN+LANLNL ++YNG+E+V VGN
Sbjct: 416 HSPSQLAAMAVNSMNSQISSENTNNFWLSDSGYNVHMTNELANLNLSNNYNGEETVTVGN 442

Query: 540 EQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLS 565
            QPLNI +TG G LST SH F LS +LHAP LA+N LS
Sbjct: 476 GQPLNIENTGSGKLSTPSHTFNLSKILHAPQLATNLLS 442

[Close]

BLAST of Moc03g18490 vs. NCBI nr
Match: XP_022158189.1 (uncharacterized protein LOC111024722 [Momordica charantia])

HSP 1 Score: 200.3 bits (508), Expect = 4.8e-47
Identity = 113/160 (70.62%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 475 MAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANLNLVDSYNGDESVIVGNEQPLNIIH 534
           MAVNAMTPSSS NTHNNFWLS SG NAHVTNDL NLNLVDSYNG+E V VGN Q LNI H
Sbjct: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60

Query: 535 TGGGILSTSSHAFTLSNVLHAPDLASNHLS----------------------DKVTGNTL 594
           TG GILS SSHAFT+SNVLHAPDLA+N LS                      DKVT  TL
Sbjct: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL 120

Query: 595 YKRKSVNGLYHIPSSSTLLLARNELHPKNYGLLAKTESYL 613
           YK KSVNGLY IPSSSTL  ARNELHPKN  LLAK  SYL
Sbjct: 121 YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYL 160

[Close]

BLAST of Moc03g18490 vs. NCBI nr
Match: KAA8519786.1 (hypothetical protein F0562_014124 [Nyssa sinensis])

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-34
Identity = 142/520 (27.31%), Postives = 230/520 (44.23%), Query Frame = 0


Query: 120 KVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVS 179
           ++SSIL+AHS  G ++ + P   +FV+   G  T ++N  +   +++DQ L+TL+NAT+S
Sbjct: 73  QISSILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLS 132

Query: 180 PSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVK----------------- 239
            + L+HV+  ++++E WL+LE+++S+ +R +IL+L  AL+ +                  
Sbjct: 133 QTALSHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKGKDSIDSYIQKIKQAR 192

Query: 240 ----------DDEEILVHILNGLTSNFNAFRTSIRTLNDTVCVEELSVLLEVEEKALVAH 299
                     +DE+IL+++LNGL   +NAF+TSIRT ++ + +EE+  +L++EE+ +   
Sbjct: 193 DSLASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTI--- 252

Query: 300 SSSIDLVPIAMVSTKGSQFPISTAAAARSPAVCNEPAPLPAAFLAAAHGDGSDPRRSTAN 359
                                       S    N   P P A +A  +     P  S+  
Sbjct: 253 ---------------------------ESVHKQNNSPPFPGAMMATNY----RPNFSSNR 312

Query: 360 GSDPRRTSTTCYYDPTNSNSSG-GICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRF 419
           G           Y P+N +  G G      R GR+   H   +     P+ G+ +L    
Sbjct: 313 G-----------YSPSNFSGRGRGRGRFSNRGGRM---HSFGRFQ--SPNFGQSNL---- 372

Query: 420 EIDAKLKGAVVSN-RGNNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNF 479
                 K    SN R NN      +I     H  L                 D    ++F
Sbjct: 373 --PYPTKQPQQSNQRSNNSHPVVCQICNKNGHSAL-----------------DCYHRMDF 432

Query: 480 LILVAAIIPPISLEGRHPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANL 539
                      S +G+ P  QL AM+    T S   +   N+W + +G   H+T DLANL
Sbjct: 433 -----------SYQGKPPSPQLTAMSATYNTGS---DCSPNYWYTDTGATNHITADLANL 492

Query: 540 NLVDSYNGDESVIVGNEQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLS------ 589
           N    Y GD+++ + N Q L+I H+G   +  + H F L+NVL  P +A+N LS      
Sbjct: 493 NFPVEYQGDDNITIANGQALDISHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCK 505

[Close]

BLAST of Moc03g18490 vs. NCBI nr
Match: KAA8524269.1 (hypothetical protein F0562_010692 [Nyssa sinensis])

HSP 1 Score: 158.7 bits (400), Expect = 1.6e-34
Identity = 144/531 (27.12%), Postives = 233/531 (43.88%), Query Frame = 0


Query: 120 KVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVS 179
           ++SSIL+AHS  G ++ + P   +FV+   G  T ++N  +   +++DQ L+TL+NAT+S
Sbjct: 73  QISSILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLS 132

Query: 180 PSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVK----------------- 239
            + L+HV+  ++++E WL+LE+++S+ +R +IL+L  AL+ +                  
Sbjct: 133 QTALSHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKGKDSIDSYIQKIKQAR 192

Query: 240 ----------DDEEILVHILNGLTSNFNAFRTSIRTLNDTVCVEELSVLLEVEEKALVAH 299
                     +DE+IL+++LNGL   +NAF+TSIRT ++ + +EE+  +L++EE+ +   
Sbjct: 193 DSLASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTI--- 252

Query: 300 SSSIDLVPIAMVSTKGSQFPISTAAAARSPAVCNEPAPLPAAFLAAAHGDGSDPRRSTAN 359
                                       S    N   P P A +A  +     P  S+  
Sbjct: 253 ---------------------------ESVHKQNNSPPFPGAMMATNY----RPNFSSNR 312

Query: 360 GSDPRRTSTTCYYDPTNSNSSG-GICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRF 419
           G           Y P+N +  G G      R GR+   H   +     P+ G+ +L    
Sbjct: 313 G-----------YSPSNFSGRGRGRGRFSNRGGRM---HSFGRFQ--SPNFGQSNL---- 372

Query: 420 EIDAKLKGAVVSN-RGNNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNF 479
                 K    SN R NN      +I     H  L                 D    ++F
Sbjct: 373 --PYPTKQPQQSNQRSNNSHPVVCQICNKNGHSAL-----------------DCYHRMDF 432

Query: 480 LILVAAIIPPISLEGRHPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANL 539
                      S +G+ P  QL AM+    T S   +   N+W + +G   H+T DLANL
Sbjct: 433 -----------SYQGKPPSPQLTAMSATYNTGS---DCSPNYWYTDTGATNHITADLANL 492

Query: 540 NLVDSYNGDESVIVGNEQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLS------ 599
           N    Y GD+++ + N Q L+I H+G   +  + H F L+NVL  P +A+N LS      
Sbjct: 493 NFPVEYQGDDNITIANGQALDISHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCK 516

[Close]

BLAST of Moc03g18490 vs. NCBI nr
Match: KAA8535282.1 (hypothetical protein F0562_030285 [Nyssa sinensis])

HSP 1 Score: 158.3 bits (399), Expect = 2.1e-34
Identity = 142/520 (27.31%), Postives = 230/520 (44.23%), Query Frame = 0


Query: 120 KVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVS 179
           ++SSIL+AHS  G ++ + P   +FV+   G  T ++N  +   +++DQ L+TL+NAT+S
Sbjct: 73  QISSILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLS 132

Query: 180 PSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVK----------------- 239
            + L+HV+  ++++E WL+LE+++S+ +R +IL+L  AL+ +                  
Sbjct: 133 QTALSHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKGKDSIDSYIQKIKRAR 192

Query: 240 ----------DDEEILVHILNGLTSNFNAFRTSIRTLNDTVCVEELSVLLEVEEKALVAH 299
                     +DE+IL+++LNGL   +NAF+TSIRT ++ + +EE+  +L++EE+ +   
Sbjct: 193 DSLASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTI--- 252

Query: 300 SSSIDLVPIAMVSTKGSQFPISTAAAARSPAVCNEPAPLPAAFLAAAHGDGSDPRRSTAN 359
                                       S    N   P P A +A  +     P  S+  
Sbjct: 253 ---------------------------ESVHKQNNSPPFPGAMMATNY----RPNFSSNR 312

Query: 360 GSDPRRTSTTCYYDPTNSNSSG-GICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRF 419
           G           Y P+N +  G G      R GR+   H   +     P+ G+ +L    
Sbjct: 313 G-----------YSPSNFSGRGRGRGRFSNRGGRM---HSFGRFQ--SPNFGQSNL---- 372

Query: 420 EIDAKLKGAVVSN-RGNNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNF 479
                 K    SN R NN      +I     H  L                 D    ++F
Sbjct: 373 --PYPTKQPQQSNQRSNNSHPVVCQICNKNGHSAL-----------------DCYHRMDF 432

Query: 480 LILVAAIIPPISLEGRHPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANL 539
                      S +G+ P  QL AM+    T S   +   N+W + +G   H+T DLANL
Sbjct: 433 -----------SYQGKPPSPQLTAMSATYNTGS---DCSPNYWYTDTGATNHITADLANL 492

Query: 540 NLVDSYNGDESVIVGNEQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLS------ 589
           N    Y GD+++ + N Q L+I H+G   +  + H F L+NVL  P +A+N LS      
Sbjct: 493 NFPVEYQGDDNITIANGQALDISHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCK 505

[Close]

BLAST of Moc03g18490 vs. ExPASy TrEMBL
Match: A0A5A7VGG0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00280 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-53
Identity = 175/458 (38.21%), Postives = 235/458 (51.31%), Query Frame = 0


Query: 120 KVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVS 179
           +VSSIL+AHSFFG+++ + P   + + S+T    +++N  +LQ  SR Q LITLINAT+S
Sbjct: 56  QVSSILKAHSFFGHIDDTLPCPPKHLSSSTLGTNSEINPEYLQWLSRSQALITLINATLS 115

Query: 180 PSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVKDDEEILVHILNGLTSNF 239
            S LAHVV S S+K LWLSLEK    K   + + L        +DEEILVH LNGL  +F
Sbjct: 116 SSALAHVVGSVSSKALWLSLEKPLIDKLVAASISL--------EDEEILVHTLNGLPVSF 175

Query: 240 NAFRTSIRTLNDTVCVEELSVLLEVEEKALVAHSSSIDLVPIAMVSTKGSQFPISTAAAA 299
           NAFRTSIRT +  + +EEL  LL + E+  +A +S+I+ +P AM +   SQ   S     
Sbjct: 176 NAFRTSIRTRSGNISLEELHTLL-ISEETTMAKTSAIEAIPTAMAAFHPSQHHSSRGRGR 235

Query: 300 R-----------SPAVCNEPAPLPAAF--LAAAHGDGSDPRRSTANGSDPRRTSTTCYYD 359
           R           SP   N      +    L + +  G+ P     N ++        ++ 
Sbjct: 236 RFHSTGNPIFNSSPNSSNRGINFASGSRGLESNNNFGTQPNHFQPNYNNHGPFLPPSHFT 295

Query: 360 PTNSNSSGGICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRFEIDAKLKGAVVSNRG 419
           P + N  G I +        + +H  S                 F ++A        N G
Sbjct: 296 PVHPNQRGIIGS--------SPSHGPS-----------------FRLEA--------NSG 355

Query: 420 NNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNFLILVAAIIPPISLEGR 479
            NG     +I     HK                 ++D    +NF           S + R
Sbjct: 356 YNG-----RIFCQICHKQ-------------EHGALDCYNHMNF-----------SYQDR 415

Query: 480 HPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANLNLVDSYNGDESVIVGN 539
           H P+QLAAMAVN+M    S    NNFWLS SGYN H+TN+LANLNL ++YNG+E+V VGN
Sbjct: 416 HSPSQLAAMAVNSMNSQISSENTNNFWLSDSGYNVHMTNELANLNLSNNYNGEETVTVGN 442

Query: 540 EQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLS 565
            QPLNI +TG G LST SH F LS +LHAP LA+N LS
Sbjct: 476 GQPLNIENTGSGKLSTPSHTFNLSKILHAPQLATNLLS 442

[Close]

BLAST of Moc03g18490 vs. ExPASy TrEMBL
Match: A0A6J1DYN6 (uncharacterized protein LOC111024722 OS=Momordica charantia OX=3673 GN=LOC111024722 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.3e-47
Identity = 113/160 (70.62%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 475 MAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANLNLVDSYNGDESVIVGNEQPLNIIH 534
           MAVNAMTPSSS NTHNNFWLS SG NAHVTNDL NLNLVDSYNG+E V VGN Q LNI H
Sbjct: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60

Query: 535 TGGGILSTSSHAFTLSNVLHAPDLASNHLS----------------------DKVTGNTL 594
           TG GILS SSHAFT+SNVLHAPDLA+N LS                      DKVT  TL
Sbjct: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL 120

Query: 595 YKRKSVNGLYHIPSSSTLLLARNELHPKNYGLLAKTESYL 613
           YK KSVNGLY IPSSSTL  ARNELHPKN  LLAK  SYL
Sbjct: 121 YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAKAGSYL 160

[Close]

BLAST of Moc03g18490 vs. ExPASy TrEMBL
Match: A0A5J4ZPW7 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_014124 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.0e-35
Identity = 142/520 (27.31%), Postives = 230/520 (44.23%), Query Frame = 0


Query: 120 KVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVS 179
           ++SSIL+AHS  G ++ + P   +FV+   G  T ++N  +   +++DQ L+TL+NAT+S
Sbjct: 73  QISSILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLS 132

Query: 180 PSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVK----------------- 239
            + L+HV+  ++++E WL+LE+++S+ +R +IL+L  AL+ +                  
Sbjct: 133 QTALSHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKGKDSIDSYIQKIKQAR 192

Query: 240 ----------DDEEILVHILNGLTSNFNAFRTSIRTLNDTVCVEELSVLLEVEEKALVAH 299
                     +DE+IL+++LNGL   +NAF+TSIRT ++ + +EE+  +L++EE+ +   
Sbjct: 193 DSLASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTI--- 252

Query: 300 SSSIDLVPIAMVSTKGSQFPISTAAAARSPAVCNEPAPLPAAFLAAAHGDGSDPRRSTAN 359
                                       S    N   P P A +A  +     P  S+  
Sbjct: 253 ---------------------------ESVHKQNNSPPFPGAMMATNY----RPNFSSNR 312

Query: 360 GSDPRRTSTTCYYDPTNSNSSG-GICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRF 419
           G           Y P+N +  G G      R GR+   H   +     P+ G+ +L    
Sbjct: 313 G-----------YSPSNFSGRGRGRGRFSNRGGRM---HSFGRFQ--SPNFGQSNL---- 372

Query: 420 EIDAKLKGAVVSN-RGNNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNF 479
                 K    SN R NN      +I     H  L                 D    ++F
Sbjct: 373 --PYPTKQPQQSNQRSNNSHPVVCQICNKNGHSAL-----------------DCYHRMDF 432

Query: 480 LILVAAIIPPISLEGRHPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANL 539
                      S +G+ P  QL AM+    T S   +   N+W + +G   H+T DLANL
Sbjct: 433 -----------SYQGKPPSPQLTAMSATYNTGS---DCSPNYWYTDTGATNHITADLANL 492

Query: 540 NLVDSYNGDESVIVGNEQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLS------ 589
           N    Y GD+++ + N Q L+I H+G   +  + H F L+NVL  P +A+N LS      
Sbjct: 493 NFPVEYQGDDNITIANGQALDISHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCK 505

[Close]

BLAST of Moc03g18490 vs. ExPASy TrEMBL
Match: A0A5J5A1U7 (Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_010692 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.8e-35
Identity = 144/531 (27.12%), Postives = 233/531 (43.88%), Query Frame = 0


Query: 120 KVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVS 179
           ++SSIL+AHS  G ++ + P   +FV+   G  T ++N  +   +++DQ L+TL+NAT+S
Sbjct: 73  QISSILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLS 132

Query: 180 PSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVK----------------- 239
            + L+HV+  ++++E WL+LE+++S+ +R +IL+L  AL+ +                  
Sbjct: 133 QTALSHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKGKDSIDSYIQKIKQAR 192

Query: 240 ----------DDEEILVHILNGLTSNFNAFRTSIRTLNDTVCVEELSVLLEVEEKALVAH 299
                     +DE+IL+++LNGL   +NAF+TSIRT ++ + +EE+  +L++EE+ +   
Sbjct: 193 DSLASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTI--- 252

Query: 300 SSSIDLVPIAMVSTKGSQFPISTAAAARSPAVCNEPAPLPAAFLAAAHGDGSDPRRSTAN 359
                                       S    N   P P A +A  +     P  S+  
Sbjct: 253 ---------------------------ESVHKQNNSPPFPGAMMATNY----RPNFSSNR 312

Query: 360 GSDPRRTSTTCYYDPTNSNSSG-GICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRF 419
           G           Y P+N +  G G      R GR+   H   +     P+ G+ +L    
Sbjct: 313 G-----------YSPSNFSGRGRGRGRFSNRGGRM---HSFGRFQ--SPNFGQSNL---- 372

Query: 420 EIDAKLKGAVVSN-RGNNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNF 479
                 K    SN R NN      +I     H  L                 D    ++F
Sbjct: 373 --PYPTKQPQQSNQRSNNSHPVVCQICNKNGHSAL-----------------DCYHRMDF 432

Query: 480 LILVAAIIPPISLEGRHPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANL 539
                      S +G+ P  QL AM+    T S   +   N+W + +G   H+T DLANL
Sbjct: 433 -----------SYQGKPPSPQLTAMSATYNTGS---DCSPNYWYTDTGATNHITADLANL 492

Query: 540 NLVDSYNGDESVIVGNEQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLS------ 599
           N    Y GD+++ + N Q L+I H+G   +  + H F L+NVL  P +A+N LS      
Sbjct: 493 NFPVEYQGDDNITIANGQALDISHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCK 516

[Close]

BLAST of Moc03g18490 vs. ExPASy TrEMBL
Match: A0A5J5B049 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_030285 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-34
Identity = 142/520 (27.31%), Postives = 230/520 (44.23%), Query Frame = 0


Query: 120 KVSSILRAHSFFGNVNSSSPSVEQFVRSATGIVTTKVNTPFLQSSSRDQGLITLINATVS 179
           ++SSIL+AHS  G ++ + P   +FV+   G  T ++N  +   +++DQ L+TL+NAT+S
Sbjct: 73  QISSILKAHSLIGYIDGTYPCPNKFVQDERGAATAQINPEYQIWNTQDQALMTLLNATLS 132

Query: 180 PSTLAHVVDSTSAKELWLSLEKKYSSKSRFSILELHLALYTVK----------------- 239
            + L+HV+  ++++E WL+LE+++S+ +R +IL+L  AL+ +                  
Sbjct: 133 QTALSHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISKGKDSIDSYIQKIKRAR 192

Query: 240 ----------DDEEILVHILNGLTSNFNAFRTSIRTLNDTVCVEELSVLLEVEEKALVAH 299
                     +DE+IL+++LNGL   +NAF+TSIRT ++ + +EE+  +L++EE+ +   
Sbjct: 193 DSLASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTI--- 252

Query: 300 SSSIDLVPIAMVSTKGSQFPISTAAAARSPAVCNEPAPLPAAFLAAAHGDGSDPRRSTAN 359
                                       S    N   P P A +A  +     P  S+  
Sbjct: 253 ---------------------------ESVHKQNNSPPFPGAMMATNY----RPNFSSNR 312

Query: 360 GSDPRRTSTTCYYDPTNSNSSG-GICALQQRLGRLAVTHIRSKLDLGYPHLGELDLVLRF 419
           G           Y P+N +  G G      R GR+   H   +     P+ G+ +L    
Sbjct: 313 G-----------YSPSNFSGRGRGRGRFSNRGGRM---HSFGRFQ--SPNFGQSNL---- 372

Query: 420 EIDAKLKGAVVSN-RGNNGGGNFSKIVVVAFHKMLFLISTAVLMDLVLQMSVDPIQMVNF 479
                 K    SN R NN      +I     H  L                 D    ++F
Sbjct: 373 --PYPTKQPQQSNQRSNNSHPVVCQICNKNGHSAL-----------------DCYHRMDF 432

Query: 480 LILVAAIIPPISLEGRHPPAQLAAMAVNAMTPSSSFNTHNNFWLSYSGYNAHVTNDLANL 539
                      S +G+ P  QL AM+    T S   +   N+W + +G   H+T DLANL
Sbjct: 433 -----------SYQGKPPSPQLTAMSATYNTGS---DCSPNYWYTDTGATNHITADLANL 492

Query: 540 NLVDSYNGDESVIVGNEQPLNIIHTGGGILSTSSHAFTLSNVLHAPDLASNHLS------ 589
           N    Y GD+++ + N Q L+I H+G   +  + H F L+NVL  P +A+N LS      
Sbjct: 493 NFPVEYQGDDNITIANGQALDISHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCK 505

The following BLAST results are available for this feature:

BLAST of Moc03g18490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067173.1	2.7e-53	38.21	retrotransposon protein [Cucumis melo var. makuwa] >TYK26022.1 retrotransposon p...	[more]
XP_022158189.1	4.8e-47	70.63	uncharacterized protein LOC111024722 [Momordica charantia]	[more]
KAA8519786.1	1.2e-34	27.31	hypothetical protein F0562_014124 [Nyssa sinensis]	[more]
KAA8524269.1	1.6e-34	27.12	hypothetical protein F0562_010692 [Nyssa sinensis]	[more]
KAA8535282.1	2.1e-34	27.31	hypothetical protein F0562_030285 [Nyssa sinensis]	[more]

BLAST of Moc03g18490 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc03g18490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGG0	1.3e-53	38.21	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DYN6	2.3e-47	70.63	uncharacterized protein LOC111024722 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5J4ZPW7	6.0e-35	27.31	Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0...	[more]
A0A5J5A1U7	7.8e-35	27.12	Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05...	[more]
A0A5J5B049	1.0e-34	27.31	Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0...	[more]

BLAST of Moc03g18490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..345
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 119..545
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 119..545

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc03g18490.1	Moc03g18490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding